RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUPR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176046

Ensembl transcript IDs: ENST00000324873.8, ENST00000395641.2, ENST00000567646.1

Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTGGTGTTaGCAGCAGCTTCTCTCTTGGTGCGACCTTTCCGGCCTCCACCTC +
Preference number: 1 (lower is better)
Translates to: SPVSSRARQGWGGWC*QQLLSWCDLSGLHL
Trigger: GAGGTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR CCA 90 bp GCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTaGTGTTGGCAGCAGCTTCTCTCTTGGTGCGACCTTTCCGGCCTC +
Preference number: 1 (lower is better)
Translates to: AWSPVSSRARQGWGG*CWQQLLSWCDLSGL
Trigger: GAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR CCA 90 bp CTCAGCGCCGTGCCCCTCGCTTCTTCCTCTCTGAATTCTGCAGCTTaGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTGG +
Preference number: 1 (lower is better)
Translates to: LSAVPLASSSLNSAA*SPVSSRARQGWGGW
Trigger: CCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAGAGAGGAAGAAGCGAGGGGCACGGCGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR GCA 90 bp GCTCTGTCTCAGCGCCGTGCCCCTCGCTTCTTCCTCTCTGAATTCTaGAGCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: ALSQRRAPRFFLSEF*SLVTSFLSCPPGLG
Trigger: CCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAGAGAGGAAGAAGCGAGGGGCACGGCGCTGAGACAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR GCA 90 bp CTGTGCTGGGCTGAGGGCCGACTGCCTGGTGTTGCTCCTGCCATTTaGTCCCTGGGTTCTAGAGCTGATGGTGGCCCTATTCCTGGTTCC +
Preference number: 1 (lower is better)
Translates to: LCWAEGRLPGVAPAI*SLGSRADGGPIPGS
Trigger: GGAACCAGGAATAGGGCCACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAGGAGCAACACCAGGCAGTCGGCCCTCAGCCCAGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp AATTCTGCAGCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTaGGGCGGTTGGTGTTGGCAGCAGCTTCTCTCTTGGTGCGACCTT +
Preference number: 1 (lower is better)
Translates to: NSAAWSPVSSRARQG*GGWCWQQLLSWCDL
Trigger: AAGGTCGCACCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGCTGCAGAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR GCA 90 bp TTTCTGAAGCCAACACACCAGGTCTGTGCTGGGCTGAGGGCCGACTaGCTGGTGTTGCTCCTGCCATTTGCTCCCTGGGTTCTAGAGCTG +
Preference number: 1 (lower is better)
Translates to: FLKPTHQVCAGLRAD*LVLLLPFAPWVLEL
Trigger: CAGCTCTAGAACCCAGGGAGCAAATGGCAGGAGCAACACCAGGCAGTCGGCCCTCAGCCCAGCACAGACCTGGTGTGTTGGCTTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp GAGATGTTTCCAGGATTTTCTGAAGCCAACACACCAGGTCTGTGCTaGGCTGAGGGCCGACTGCCTGGTGTTGCTCCTGCCATTTGCTCC +
Preference number: 1 (lower is better)
Translates to: EMFPGFSEANTPGLC*AEGRLPGVAPAICS
Trigger: GGAGCAAATGGCAGGAGCAACACCAGGCAGTCGGCCCTCAGCCCAGCACAGACCTGGTGTGTTGGCTTCAGAAAATCCTGGAAACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp CCCCCATCTCACTTCCCAGAACCCTGTCCCACAGCCCCCTTGGCCTaGGGACCCACCTCATATCTGAAGACAATAAGATCCCTGAATATG +
Preference number: 1 (lower is better)
Translates to: PPSHFPEPCPTAPLA*GPTSYLKTIRSLNM
Trigger: CATATTCAGGGATCTTATTGTCTTCAGATATGAGGTGGGTCCCCAGGCCAAGGGGGCTGTGGGACAGGGTTCTGGGAAGTGAGATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp GTGGGGAGAGTTGGGCCAGAGGTCCTTAAATGTCCTTCCGGGTCATaGATTCATTCTGTGGCTGTGATTAGGCTGGACTCAAGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: VGRVGPEVLKCPSGS*IHSVAVIRLDSREG
Trigger: CCCTTCCCTTGAGTCCAGCCTAATCACAGCCACAGAATGAATCCATGACCCGGAAGGACATTTAAGGACCTCTGGCCCAACTCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 90 bp AAGGGGATGGATACAGGTCCCCAAGGGTTCAAGCTGGTCGTAGTCTaGCGTGCATCTGTTCCTGCTCTATCAGGTACTTCGGTCTTCTGT +
Preference number: 1 (lower is better)
Translates to: KGMDTGPQGFKLVVV*RASVPALSGTSVFC
Trigger: ACAGAAGACCGAAGTACCTGATAGAGCAGGAACAGATGCACGTCAGACTACGACCAGCTTGAACCCTTGGGGACCTGTATCCATCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 90 bp CACACACCCAAGCTGTGGCTGCCGTGCGTGTCTATTTATTGTTGCTaGCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCTTTCTTTTCT +
Preference number: 1 (lower is better)
Translates to: HTPKLWLPCVSIYCC*HPGGAPVSSVAFFS
Trigger: AGAAAAGAAAGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAAATAGACACGCACGGCAGCCACAGCTTGGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 90 bp GAACACACACCCAAGCTGTGGCTGCCGTGCGTGTCTATTTATTGTTaGTGCCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCTTTCTTT +
Preference number: 1 (lower is better)
Translates to: EHTPKLWLPCVSIYC*CHPGGAPVSSVAFF
Trigger: AAAGAAAGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAAATAGACACGCACGGCAGCCACAGCTTGGGTGTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 90 bp GATGGATACAGGTCCCCAAGGGTTCAAGCTGGTCGTAGTCTGACGTaGATCTGTTCCTGCTCTATCAGGTACTTCGGTCTTCTGTGGATG +
Preference number: 1 (lower is better)
Translates to: DGYRSPRVQAGRSLT*ICSCSIRYFGLLWM
Trigger: CATCCACAGAAGACCGAAGTACCTGATAGAGCAGGAACAGATGCACGTCAGACTACGACCAGCTTGAACCCTTGGGGACCTGTATCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp CTGACGTGCATCTGTTCCTGCTCTATCAGGTACTTCGGTCTTCTGTaGATGTCCTTGGGTCCCCATGAACCACTGACTCCAAGTTCTGCA +
Preference number: 1 (lower is better)
Translates to: LTCICSCSIRYFGLL*MSLGPHEPLTPSSA
Trigger: TGCAGAACTTGGAGTCAGTGGTTCATGGGGACCCAAGGACATCCACAGAAGACCGAAGTACCTGATAGAGCAGGAACAGATGCACGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp CTCCATAGTGGTATTCAAACAAGCAGAGGCAATCCCACTGTTGCGTaGGGAGAGTTGGGCCAGAGGTCCTTAAATGTCCTTCCGGGTCAT +
Preference number: 1 (lower is better)
Translates to: LHSGIQTSRGNPTVA*GELGQRSLNVLPGH
Trigger: ATGACCCGGAAGGACATTTAAGGACCTCTGGCCCAACTCTCCCCACGCAACAGTGGGATTGCCTCTGCTTGTTTGAATACCACTATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 90 bp AGGTCCTTAAATGTCCTTCCGGGTCATGGATTCATTCTGTGGCTGTaGTTAGGCTGGACTCAAGGGAAGGGGATGGATACAGGTCCCCAA +
Preference number: 1 (lower is better)
Translates to: RSLNVLPGHGFILWL*LGWTQGKGMDTGPQ
Trigger: TTGGGGACCTGTATCCATCCCCTTCCCTTGAGTCCAGCCTAATCACAGCCACAGAATGAATCCATGACCCGGAAGGACATTTAAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp GTGGCTAAGCAGCTCAATGCTACATTTCCCAACCTCTCTCGTAGTTaGGTGTGGCCATGTAGCCACATTCGGAGCAGATGTGATGTGTTC +
Preference number: 1 (lower is better)
Translates to: VAKQLNATFPNLSRS*VWPCSHIRSRCDVF
Trigger: GAACACATCACATCTGCTCCGAATGTGGCTACATGGCCACACCCAACTACGAGAGAGGTTGGGAAATGTAGCATTGAGCTGCTTAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 90 bp GGCAAGCACACACATGCCCGAACAAAAACACACAAAGAACAAGGATaGACACACACCCAAGCTGTGGCTGCCGTGCGTGTCTATTTATTG +
Preference number: 1 (lower is better)
Translates to: GKHTHARTKTHKEQG*THTQAVAAVRVYLL
Trigger: CAATAAATAGACACGCACGGCAGCCACAGCTTGGGTGTGTGTTCATCCTTGTTCTTTGTGTGTTTTTGTTCGGGCATGTGTGTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 90 bp TGTATTCACTCTCTCTGGTTCCCTTTCATCATAAAACCCTGCTGTTaGCCAAGTTTTGGCTACCACGTGGCTAAGCAGCTCAATGCTACA +
Preference number: 1 (lower is better)
Translates to: CIHSLWFPFIIKPCC*PSFGYHVAKQLNAT
Trigger: TGTAGCATTGAGCTGCTTAGCCACGTGGTAGCCAAAACTTGGGCAACAGCAGGGTTTTATGATGAAAGGGAACCAGAGAGAGTGAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 90 bp GTGAGTAAAAATAGCTGGAATCCTCAACACAATGGAGCTGCCATTTaGACCCAGGAGGACTTGGGGCTAAGTAAGAGAGGAGTAACTTTG +
Preference number: 1 (lower is better)
Translates to: VSKNSWNPQHNGAAI*TQEDLGLSKRGVTL
Trigger: CAAAGTTACTCCTCTCTTACTTAGCCCCAAGTCCTCCTGGGTTCAAATGGCAGCTCCATTGTGTTGAGGATTCCAGCTATTTTTACTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 90 bp TTTGGGCCTCAAAGTGGAAGCCATGTTTTGGGTGTGGCAGAACAGTaGGTAAAAATAGCTGGAATCCTCAACACAATGGAGCTGCCATTT +
Preference number: 1 (lower is better)
Translates to: FGPQSGSHVLGVAEQ*VKIAGILNTMELPF
Trigger: AAATGGCAGCTCCATTGTGTTGAGGATTCCAGCTATTTTTACTCACTGTTCTGCCACACCCAAAACATGGCTTCCACTTTGAGGCCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 90 bp TGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCACTCTCTCTaGTTCCCTTTCATCATAAAACCCTGCTGTTGCCCAAGTTTTGGC +
Preference number: 1 (lower is better)
Translates to: CGQCFLLASSCIHSL*FPFIIKPCCCPSFG
Trigger: GCCAAAACTTGGGCAACAGCAGGGTTTTATGATGAAAGGGAACCAGAGAGAGTGAATACACGAAGAAGCTAGCAAGAAACATTGCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 90 bp TCTCAGCGCCGTGCCCCTCGCTTCTTCCTCTCTGAATTCTGCAGCTaGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTG +
Preference number: 2 (lower is better)
Translates to: SQRRAPRFFLSEFCS*VTSFLSCPPGLGRL
Trigger: CAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAGAGAGGAAGAAGCGAGGGGCACGGCGCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR-3UTR CCA 90 bp CTGCCATTTGCTCCCTGGGTTCTAGAGCTGATGGTGGCCCTATTCCTGGTTCCAGCCTGGATCCTGTCCTaGGTCCTCCTTCCTCCGCAG +
Preference number: 2 (lower is better)
Translates to: LPFAPWVLELMVALFLVPAWILS*VLLPPQ
Trigger: CTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC...TGGAACCAGGAATAGGGCCACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR CCA 90 bp AGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTGCCTGGATCCTGTCCTaGGTCCTCCTTCCTCCGCAG +
Preference number: 2 (lower is better)
Translates to: SPVSIAGCSVHGLASSPAAWILS*VLLPPQ
Trigger: CTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC...AGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
3UTR-3UTR CCA 90 bp AGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTTGGGGCGGTTGGTGTTaGCAGCAGCTTCTCTCTTGG +
Preference number: 2 (lower is better)
Translates to: SPVSIAGCSVHGLASSPAWGGWC*QQLLSW
Trigger: CCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCA...AGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR CAA 90 bp ATCTGTTCCTGCTCTATCAGGTACTTCGGTCTTCTGTGGATGTCCTaGGGTCCCCATGAACCACTGACTCCAAGTTCTGCAGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ICSCSIRYFGLLWMS*GPHEPLTPSSAVWG
Trigger: GCCCCACACTGCAGAACTTGGAGTCAGTGGTTCATGGGGACCCAAGGACATCCACAGAAGACCGAAGTACCTGATAGAGCAGGAACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 90 bp CTGATGGTGGCCCTATTCCTGGTTCCAGTCATATCAGGATTCTATTaGTCCCTCTCAGCAGCACAGGCCTCCAGCAGCATCCTGGTAACT +
Preference number: 2 (lower is better)
Translates to: LMVALFLVPVISGFY*SLSAAQASSSILVT
Trigger: AGTTACCAGGATGCTGCTGGAGGCCTGTGCTGCTGAGAGGGACAAATAGAATCCTGATATGACTGGAACCAGGAATAGGGCCACCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR CCA 90 bp AGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTCTGAATTCTGCAGCTTaGTCACCAGTTTCCTCTCGT +
Preference number: 2 (lower is better)
Translates to: SPVSIAGCSVHGLASSPALNSAA*SPVSSR
Trigger: ACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAG...AGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR CAA 90 bp GGTATTCAAACAAGCAGAGGCAATCCCACTGTTGCGTGGGGAGAGTaGGGCCAGAGGTCCTTAAATGTCCTTCCGGGTCATGGATTCATT +
Preference number: 2 (lower is better)
Translates to: GIQTSRGNPTVAWGE*GQRSLNVLPGHGFI
Trigger: AATGAATCCATGACCCGGAAGGACATTTAAGGACCTCTGGCCCAACTCTCCCCACGCAACAGTGGGATTGCCTCTGCTTGTTTGAATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR GCA 90 bp TCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCACTCTCTCTGGTCACAGCGTAGACCCTaGAAGAGCAGGAACACTCCC +
Preference number: 2 (lower is better)
Translates to: SACGQCFLLASSCIHSLWSQRRP*KSRNTP
Trigger: GGGAGTGTTCCTGCTCTTGCAGGGTCTACGCTGTGA...CCAGAGAGAGTGAATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR CCA 90 bp TCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCACTCTCTCTGGGCTGGAAGGCTGAGGTaGGCAGATCATTTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: SACGQCFLLASSCIHSLWAGRLR*ADHLRP
Trigger: TGGCCTCAAATGATCTGCCCACCTCAGCCTTCCAGC...CCAGAGAGAGTGAATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR GCA 90 bp ACATCTGTTGAGTCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTTTCAAGCGATTCTACTaGCTCAGCCTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: TSVESACGQCFLLASSCIFKRFY*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGTAGAATCGCTTGAA...AATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGACTCAACAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR GCA 90 bp GTTCTACTTTTAGATTATGCCCTAAAATTGAAGAGGTGTGGCCTCCTCTGTCTCTCTATTTATTGTTGCTaGCACCCTGGAGGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: VLLLDYALKLKRCGLLCLSIYCC*HPGGAP
Trigger: TGGGGCTCCTCCAGGGTGGCAGCAACAATAAATAGA...GAGACAGAGGAGGCCACACCTCTTCAATTTTAGGGCATAATCTAAAAGTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR GCA 90 bp ACATCTGTTGAGTCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTGTGTCTATTTATTGTTaGTGCCACCCTGGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: TSVESACGQCFLLASSCIVSIYC*CHPGGA
Trigger: GGCTCCTCCAGGGTGGCAGCAACAATAAATAGACAC...AATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGACTCAACAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR CCA 90 bp GTTCTACTTTTAGATTATGCCCTAAAATTGAAGAGGTGTGGCCTCCTCTGTCTCAACAAAAACAGGTGCTaGGGAGGGCCGTGTTTCATG +
Preference number: 2 (lower is better)
Translates to: VLLLDYALKLKRCGLLCLNKNRC*GGPCFM
Trigger: CATGAAACACGGCCCTCCCCAGCACCTGTTTTTGTT...GAGACAGAGGAGGCCACACCTCTTCAATTTTAGGGCATAATCTAAAAGTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR TCA 90 bp TTTAGGATTCTTCATTGTCAATACATGGTTCTTCCCAGGCATGTAGCAAAGGGGGGTGTGGCAGAACAGTaGGTAAAAATAGCTGGAATC +
Preference number: 2 (lower is better)
Translates to: FRILHCQYMVLPRHVAKGGVAEQ*VKIAGI
Trigger: GATTCCAGCTATTTTTACTCACTGTTCTGCCACACC...CCCCTTTGCTACATGCCTGGGAAGAACCATGTATTGACAATGAAGAATCCTAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR TCA 90 bp GTTCTACTTTTAGATTATGCCCTAAAATTGAAGAGGTGTGGCCTCCTCTGTCTCTCCTGGCCAACATGGTaGAACTCTGTTTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: VLLLDYALKLKRCGLLCLSWPTW*NSVSTK
Trigger: TTTAGTAGAAACAGAGTTTCACCATGTTGGCCAGGA...GAGACAGAGGAGGCCACACCTCTTCAATTTTAGGGCATAATCTAAAAGTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp TGGGGCGGTTGGTGTTGGCAGCAGCTTCTCTCTTGGTaGGACCTTTCCGGCCTCCACCTCCACTGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: WGGWCWQQLLSW*DLSGLHLHCRW
Trigger: CCACCTGCAGTGGAGGTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR CCA 72 bp GCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTaGGGCGGTTGGTGTTGGCAGCAGCTTCTCTCTTGG +
Preference number: 3 (lower is better)
Translates to: AWSPVSSRARQG*GGWCWQQLLSW
Trigger: CCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR-3UTR CAA 90 bp TTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTGGTGTTGGCAGCAGTCCCGTCTCTATaGCTGGGTGTAGTGTCCATG +
Preference number: 3 (lower is better)
Translates to: LVTSFLSCPPGLGRLVLAAVPSL*LGVVSM
Trigger: CATGGACACTACACCCAGCAATAGAGACGGGACTGC...TGCCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
3UTR CCA 72 bp CCAGGATTTTCTGAAGCCAACACACCAGGTCTGTGCTaGGCTGAGGGCCGACTGCCTGGTGTTGCTCCTGCC +
Preference number: 3 (lower is better)
Translates to: PGFSEANTPGLC*AEGRLPGVAPA
Trigger: GGCAGGAGCAACACCAGGCAGTCGGCCCTCAGCCCAGCACAGACCTGGTGTGTTGGCTTCAGAAAATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp GCTGAGGGCCGACTGCCTGGTGTTGCTCCTGCCATTTaGTCCCTGGGTTCTAGAGCTGATGGTGGCCCTATT +
Preference number: 3 (lower is better)
Translates to: AEGRLPGVAPAI*SLGSRADGGPI
Trigger: AATAGGGCCACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAGGAGCAACACCAGGCAGTCGGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp GCCGACTGCCTGGTGTTGCTCCTGCCATTTGCTCCCTaGGTTCTAGAGCTGATGGTGGCCCTATTCCTGGTT +
Preference number: 3 (lower is better)
Translates to: ADCLVLLLPFAP*VLELMVALFLV
Trigger: AACCAGGAATAGGGCCACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAGGAGCAACACCAGGCAGTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp CACTTCCCAGAACCCTGTCCCACAGCCCCCTTGGCCTaGGGACCCACCTCATATCTGAAGACAATAAGATCC +
Preference number: 3 (lower is better)
Translates to: HFPEPCPTAPLA*GPTSYLKTIRS
Trigger: GGATCTTATTGTCTTCAGATATGAGGTGGGTCCCCAGGCCAAGGGGGCTGTGGGACAGGGTTCTGGGAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR CAA 90 bp AGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTGCAGTCCCGTCTCTATaGCTGGGTGTAGTGTCCATG +
Preference number: 3 (lower is better)
Translates to: SPVSIAGCSVHGLASSPAAVPSL*LGVVSM
Trigger: CATGGACACTACACCCAGCAATAGAGACGGGACTGC...AGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
3UTR CCA 72 bp GCAGTGGCACCATCATGGCTTACTGTAGCCTCCAACTaGGTTCAAGGGATCCTCCAACTTCAGCCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: AVAPSWLTVASN*VQGILQLQPLS
Trigger: GCTCAGAGGCTGAAGTTGGAGGATCCCTTGAACCCAGTTGGAGGCTACAGTAAGCCATGATGGTGCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 72 bp GTACTTCGGTCTTCTGTGGATGTCCTTGGGTCCCCATaGACCACTGACTCCAAGTTCTGCAGTGTGGGGCTT +
Preference number: 3 (lower is better)
Translates to: VLRSSVDVLGSP*TTDSKFCSVGL
Trigger: AAGCCCCACACTGCAGAACTTGGAGTCAGTGGTTCATGGGGACCCAAGGACATCCACAGAAGACCGAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp AAGCTGTGGCTGCCGTGCGTGTCTATTTATTGTTGCTaGCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCT +
Preference number: 3 (lower is better)
Translates to: KLWLPCVSIYCC*HPGGAPVSSVA
Trigger: AGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAAATAGACACGCACGGCAGCCACAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 72 bp GATACAGGTCCCCAAGGGTTCAAGCTGGTCGTAGTCTaGCGTGCATCTGTTCCTGCTCTATCAGGTACTTCG +
Preference number: 3 (lower is better)
Translates to: DTGPQGFKLVVV*RASVPALSGTS
Trigger: CGAAGTACCTGATAGAGCAGGAACAGATGCACGTCAGACTACGACCAGCTTGAACCCTTGGGGACCTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp AGGTCCCCAAGGGTTCAAGCTGGTCGTAGTCTGACGTaGATCTGTTCCTGCTCTATCAGGTACTTCGGTCTT +
Preference number: 3 (lower is better)
Translates to: RSPRVQAGRSLT*ICSCSIRYFGL
Trigger: AAGACCGAAGTACCTGATAGAGCAGGAACAGATGCACGTCAGACTACGACCAGCTTGAACCCTTGGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR CAA 90 bp CTGCCATTTGCTCCCTGGGTTCTAGAGCTGATGGTGGCCCTATTCCTGGTTCCAGTATGGAAAGAGGAGTaGGAGGCAAAATCTGAAGGA +
Preference number: 3 (lower is better)
Translates to: LPFAPWVLELMVALFLVPVWKEE*EAKSEG
Trigger: TCCTTCAGATTTTGCCTCCAACTCCTCTTTCCATAC...TGGAACCAGGAATAGGGCCACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR-3UTR CAA 90 bp CTGCCATTTGCTCCCTGGGTTCTAGAGCTGATGGTGGCCCTATTCCTGGTTCCAATATCAGGATTCTATTaGTCCCTCTCAGCAGCACAG +
Preference number: 3 (lower is better)
Translates to: LPFAPWVLELMVALFLVPISGFY*SLSAAQ
Trigger: CTGTGCTGCTGAGAGGGACAAATAGAATCCTGATAT...TGGAACCAGGAATAGGGCCACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 72 bp GGGCCCAATCTCAGAGTTTTCTCCCCCGACATCTGTTaGGTCTGCATGTGGGCAATGTTTCTTGCTAGCTTC +
Preference number: 3 (lower is better)
Translates to: GPNLRVFSPDIC*VCMWAMFLASF
Trigger: GAAGCTAGCAAGAAACATTGCCCACATGCAGACTCAACAGATGTCGGGGGAGAAAACTCTGAGATTGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp GTTCAAGCTGGTCGTAGTCTGACGTGCATCTGTTCCTaGTCTATCAGGTACTTCGGTCTTCTGTGGATGTCC +
Preference number: 3 (lower is better)
Translates to: VQAGRSLTCICS*SIRYFGLLWMS
Trigger: GGACATCCACAGAAGACCGAAGTACCTGATAGAGCAGGAACAGATGCACGTCAGACTACGACCAGCTTGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp CAGCTCAATGCTACATTTCCCAACCTCTCTCGTAGTTaGGTGTGGCCATGTAGCCACATTCGGAGCAGATGT +
Preference number: 3 (lower is better)
Translates to: QLNATFPNLSRS*VWPCSHIRSRC
Trigger: ACATCTGCTCCGAATGTGGCTACATGGCCACACCCAACTACGAGAGAGGTTGGGAAATGTAGCATTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp ATCTGTTCCTGCTCTATCAGGTACTTCGGTCTTCTGTaGATGTCCTTGGGTCCCCATGAACCACTGACTCCA +
Preference number: 3 (lower is better)
Translates to: ICSCSIRYFGLL*MSLGPHEPLTP
Trigger: TGGAGTCAGTGGTTCATGGGGACCCAAGGACATCCACAGAAGACCGAAGTACCTGATAGAGCAGGAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp GTTGGGCCAGAGGTCCTTAAATGTCCTTCCGGGTCATaGATTCATTCTGTGGCTGTGATTAGGCTGGACTCA +
Preference number: 3 (lower is better)
Translates to: VGPEVLKCPSGS*IHSVAVIRLDS
Trigger: TGAGTCCAGCCTAATCACAGCCACAGAATGAATCCATGACCCGGAAGGACATTTAAGGACCTCTGGCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp GGTATTCAAACAAGCAGAGGCAATCCCACTGTTGCGTaGGGAGAGTTGGGCCAGAGGTCCTTAAATGTCCTT +
Preference number: 3 (lower is better)
Translates to: GIQTSRGNPTVA*GELGQRSLNVL
Trigger: AAGGACATTTAAGGACCTCTGGCCCAACTCTCCCCACGCAACAGTGGGATTGCCTCTGCTTGTTTGAATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp CAAACAAACCAAAAGCTGCATTCACAGCGTAGACCCTaGAAGAGCAGGAACACTCCCTGCCCCAGATACATA +
Preference number: 3 (lower is better)
Translates to: QTNQKLHSQRRP*KSRNTPCPRYI
Trigger: TATGTATCTGGGGCAGGGAGTGTTCCTGCTCTTGCAGGGTCTACGCTGTGAATGCAGCTTTTGGTTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp TCTCTCTGGTTCCCTTTCATCATAAAACCCTGCTGTTaGCCAAGTTTTGGCTACCACGTGGCTAAGCAGCTC +
Preference number: 3 (lower is better)
Translates to: SLWFPFIIKPCC*PSFGYHVAKQL
Trigger: GAGCTGCTTAGCCACGTGGTAGCCAAAACTTGGGCAACAGCAGGGTTTTATGATGAAAGGGAACCAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp CACACAAAGAACAAGGATGAACACACACCCAAGCTGTaGCTGCCGTGCGTGTCTATTTATTGTTGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: HTKNKDEHTPKL*LPCVSIYCCCH
Trigger: GTGGCAGCAACAATAAATAGACACGCACGGCAGCCACAGCTTGGGTGTGTGTTCATCCTTGTTCTTTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp GTCTATGAACAGGACACAATCAACAAAAACAGGTGCTaGGGAGGGCCGTGTTTCATGGGCAGTATCGCAAAA +
Preference number: 3 (lower is better)
Translates to: VYEQDTINKNRC*GGPCFMGSIAK
Trigger: TTTTGCGATACTGCCCATGAAACACGGCCCTCCCCAGCACCTGTTTTTGTTGATTGTGTCCTGTTCATAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CCA 72 bp TTCCACAGGCTGAGATGCAAACGTGATGGCAGGTATTaGAGTAGCTATTTTGGGCCTCAAAGTGGAAGCCAT +
Preference number: 3 (lower is better)
Translates to: FHRLRCKRDGRY*SSYFGPQSGSH
Trigger: ATGGCTTCCACTTTGAGGCCCAAAATAGCTACTCCAATACCTGCCATCACGTTTGCATCTCAGCCTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 72 bp CTGAAGACAATAAGATCCCTGAATATGAGCCCTGAGTaGGCTAGGGCAAATCCCTTAATATTTCCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: LKTIRSLNMSPE*ARANPLIFPSL
Trigger: GAGGGAAGGAAATATTAAGGGATTTGCCCTAGCTCACTCAGGGCTCATATTCAGGGATCTTATTGTCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 72 bp CAAAGTGGAAGCCATGTTTTGGGTGTGGCAGAACAGTaGGTAAAAATAGCTGGAATCCTCAACACAATGGAG +
Preference number: 3 (lower is better)
Translates to: QSGSHVLGVAEQ*VKIAGILNTME
Trigger: CTCCATTGTGTTGAGGATTCCAGCTATTTTTACTCACTGTTCTGCCACACCCAAAACATGGCTTCCACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR TCA 72 bp GTAACTTGTATGGAAAGAGGAGTTGGAGGCAAAATCTaGAGGATTTCCAAGGTAGACTGTAAGATTCTGGGC +
Preference number: 3 (lower is better)
Translates to: VTCMERGVGGKI*RISKVDCKILG
Trigger: GCCCAGAATCTTACAGTCTACCTTGGAAATCCTTCAGATTTTGCCTCCAACTCCTCTTTCCATACAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR GCA 72 bp TTCGGAGCAGATGTGATGTGTTCTACTTTTAGATTATaGCCTAAAATTGAAGAGGTGTGGCCTCCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: FGADVMCSTFRL*PKIEEVWPPLS
Trigger: AGACAGAGGAGGCCACACCTCTTCAATTTTAGGGCATAATCTAAAAGTAGAACACATCACATCTGCTCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCGGGCCTGGGGGCTGCTaGGGGGCGCTGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLGPGGC*GALVAG
Trigger: ACCAGCAACCAGCGCCCCCCAGCAGCCCCCAGGCCC...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGCGTGCCCGCCAGGGCTaGGGCGGTTGGTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPRARQG*GGWCWQ
Trigger: CTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACG...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR TCA 90 bp GGGTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCGCCCAGGCTTCCGTGTaGTCCCAGAGGAGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: GCGKPAWILSWVLLPPQSAQASV*SQRRVG
Trigger: GCCGACCCTCCTCTGGGATCACACGGAAGCCTGGGC...GGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGGGCGCTGGTTGCTGGTaGGAAGGTGGCCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPGAGCW*EGGHRA
Trigger: GGCACGATGGCCACCTTCCCACCAGCAACCAGCGCC...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTGTGGCAAGCCGGCCTaGATCCTGTCCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVCGKPA*ILSWVL
Trigger: GAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACA...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTGTGGCAAGCCGGCCTaGATCCTGTCCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLCGKPA*ILSWVL
Trigger: GAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACA...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GGTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCACACCAGGTCTGTGCTaGGCTGAGGGCCGACTGCCT +
Preference number: 4 (lower is better)
Translates to: GVASRPGSCPGSSFLRSPTPGLC*AEGRLP
Trigger: AGGCAGTCGGCCCTCAGCCCAGCACAGACCTGGTGT...GGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGGGAAGGTGGCCATCGTaGCTGGCTTGTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPGRWPS*LACLPC
Trigger: GCAGGGAAGACAAGCCAGGCACGATGGCCACCTTCC...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCGGTGGCCATCGTGCCTaGCTTGTCTTCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLGGHRA*LVFPAS
Trigger: AGAGGCAGGGAAGACAAGCCAGGCACGATGGCCACC...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGGGCGCTGGTTGCTGGTaGGAAGGTGGCCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: AGLDPVLGPPSSAVPSLLGAGCW*EGGHRA
Trigger: GGCACGATGGCCACCTTCCCACCAGCAACCAGCGCC...CAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp TCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCGGGCCTGGGGGCTGCTaGGGGGCGCTGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SFLRSPVSIAGCSVHGLAGPGGC*GALVAG
Trigger: ACCAGCAACCAGCGCCCCCCAGCAGCCCCCAGGCCC...GGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCCAGATTCATCCAGGCTaGAGTCCTCGTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVQIHPG*SPRPPG
Trigger: GCCCGGAGGACGAGGACTCCAGCCTGGATGAATCTG...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp TGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTGCCTGGATCCTGTCCTaGGTCCTCCTTCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: WQAGLDPVLGPPSSAVPSAWILS*VLLPPQ
Trigger: CTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC...AGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTGGGGGATCTTCCTaGCTCTGCCCCTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPSGGSS*LCPSIP
Trigger: GGGAATGGAGGGGCAGAGCCAGGAAGATCCCCCAGA...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTGGCCTCCCAAAGGCTaGAAGGCTGAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLWPPKG*KAEVGR
Trigger: TCTGCCCACCTCAGCCTTCCAGCCTTTGGGAGGCCA...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCCAGCTTCTCTCTTGGTaGGACCTTTCCGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVQLLSW*DLSGLH
Trigger: GTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTG...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGAGGCAATCCCACTGTTaGGTGGGGAGAGTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPRQSHC*VGRVGP
Trigger: TGGCCCAACTCTCCCCACGCAACAGTGGGATTGCCT...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GGGTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCGCAGGTATGAGCTTCTaGACGCAGCCATCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GCGKPAWILSWVLLPPQSAGMSF*TQPSGR
Trigger: CCTCCCTGATGGCTGCGTGCAGAAGCTCATACCTGC...GGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTTGCTGGTGGGAAGGTaGCCATCGTGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLLLVGR*PSCLAC
Trigger: ACAAGCCAGGCACGATGGCCACCTTCCCACCAGCAA...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp CTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTGGGCCTGGGGGCTGCTaGGGGGCGCTGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LRSPVSIAGCSVHGLASSGPGGC*GALVAG
Trigger: ACCAGCAACCAGCGCCCCCCAGCAGCCCCCAGGCCC...AGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp TCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTCGTGCCCGCCAGGGCTaGGGCGGTTGGTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SCPGSSFLRSPVSIAGCSRARQG*GGWCWQ
Trigger: CTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACG...ACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCCAGGCTGGAGTGCAATaGCACGATGTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLQAGVQ*HDVGSL
Trigger: CAGTGAGCCGACATCGTGCCATTGCACTCCAGCCTG...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTGCGATCCTCCCTCCTTaGCCTCCCAAAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WQAGLDPVLGPPSSAVPSAILPP*PPKGWK
Trigger: CTTCCAGCCTTTGGGAGGCCAAGGAGGGAGGATCGC...AGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCGCTCTCTCAGGCTCATaGATGTGCAGGCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLALSGS*MCRHRQ
Trigger: TTGCCTGTGCCTGCACATTCATGAGCCTGAGAGAGC...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCGGTGGGCAGATCATTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLGGQII*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAATGATCTGCCCACC...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCGGCAGGAGTCAGAGGTaGAGTGGGCATAGGCATGAT +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVGRSQR*SGHRHD
Trigger: ATCATGCCTATGCCCACTTCACCTCTGACTCCTGCC...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395641.2
CDS-3UTR GCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCCGTAGGCACGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLRRHEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCGTGCCTACG...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TGGTGTTGGCAGCAGCTTCTCTCTTGGTGCGACCTTTCCGGCCTCCACCTCCACGGGGGCGCTGGTTGCTaGTGGGAAGGTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: WCWQQLLSWCDLSGLHLHGGAGC*WEGGHR
Trigger: ACGATGGCCACCTTCCCACCAGCAACCAGCGCCCCC...GTGGAGGTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGCCAACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS-3UTR CCA 90 bp GCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTTGGGGCGGTTGGTGTTaGCAGCAGCTTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ASRPGSCPGSSFLRSPVSWGGWC*QQLLSW
Trigger: CCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCA...AGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTGGTGTTGGTGGGGCGGTTGGTGTTaGCAGCAGCTTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AWSPVSSRARQGWGGWCWWGGWC*QQLLSW
Trigger: CCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCA...CCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS-3UTR TCA 90 bp AGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTAGGCGGAGGTTGCAGTaGGCTGCGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: SRPGSCPGSSFLRSPVSIRRRLQ*AAIMPL
Trigger: CAGTGGCATGATCGCAGCTCACTGCAACCTCCGCCT...AATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp TGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTTCCCCCGACATCTGTTaGGTCTGCATGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: WQAGLDPVLGPPSSAVPSSPDIC*VCMWAM
Trigger: CATTGCCCACATGCAGACTCAACAGATGTCGGGGGA...AGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAAGGTCTGTGCTGGGCTaGGGGCCGACTGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVRSVLG*GPTAWC
Trigger: ACACCAGGCAGTCGGCCCTCAGCCCAGCACAGACCT...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGAACACACCAGGTCTGTaGTGGGCTGAGGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: AWILSWVLLPPQSRLYCWNTPGL*WAEGRL
Trigger: CAGTCGGCCCTCAGCCCAGCACAGACCTGGTGTGTT...CCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGCGCTTTGTCTGTCTCTaGTTTCCTGGCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLDPVLGPPSSAVPSLLLRFVCL*FPGPGP
Trigger: AGGCCCGGGGCCAGGAAAGCAGAGACAGACAAAGCG...CAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395641.2
CDS-3UTR CCA 90 bp TCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCGGCGCTGGTTGCTGGTaGGAAGGTGGCCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: SFLRSPVSIAGCSVHGLAGAGCW*EGGHRA
Trigger: GGCACGATGGCCACCTTCCCACCAGCAACCAGCGCC...GGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp AGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTCGTGCCCGCCAGGGCTaGGGCGGTTGGTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPVSIAGCSVHGLASSPARARQG*GGWCWQ
Trigger: CTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACG...AGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGCCTGGATCCTGTCCTaGGTCCTCCTTCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGAWILS*VLLPPQ
Trigger: CTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR TCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTGGTCAGGCTGGTCTTaGACTCCTGACTTTGTGATC +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVWSGWS*TPDFVI
Trigger: GATCACAAAGTCAGGAGTTCAAGACCAGCCTGACCA...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGAGGGAGGCTGAGGCATaGAAATCGCTTGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: AGLDPVLGPPSSAVPSLLREAEA*KSLEPR
Trigger: CCTGGGTTCAAGCGATTTTCATGCCTCAGCCTCCCT...CAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp CCATTCCCAGCCTCTCACTCCCCATCTTGCACTTTTGCTAGGGTTGGAGGCGCTCTCACCTCAGCCTCCTaGGTAGGTGGGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: PFPASHSPSCTFARVGGALTSAS*VGGPTG
Trigger: GCCTGTGGGCCCACCTACTCAGGAGGCTGAGGTGAG...AGCGCCTCCAACCCTAGCAAAAGTGCAAGATGGGGAGTGAGAGGCTGGGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCCTGGCTTGTCTTCCCTaGCTCTCTTCTTCTCCTAAC +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLLACLP*LSSSPN
Trigger: GTTAGGAGAAGAAGAGAGGCAGGGAAGACAAGCCAG...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp GCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGCAGCTTCTCTCTTGGTaGGACCTTTCCGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AWILSWVLLPPQSRLYCWQLLSW*DLSGLH
Trigger: GTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTG...CCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCGGTCGTAGTCTGACGTaGATCTGTTCCTGCTCTATC +
Preference number: 4 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLGRSLT*ICSCSI
Trigger: GATAGAGCAGGAACAGATGCACGTCAGACTACGACC...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGGTGGCCATCGTGCCTaGCTTGTCTTCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGGGHRA*LVFPAS
Trigger: AGAGGCAGGGAAGACAAGCCAGGCACGATGGCCACC...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp AGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTTTGCTGGTGGGAAGGTaGCCATCGTGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SRPGSCPGSSFLRSPVSILLVGR*PSCLAC
Trigger: ACAAGCCAGGCACGATGGCCACCTTCCCACCAGCAA...AATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp TCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATGGGGGCGCTGGTTGCTaGTGGGAAGGTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: SSAVPSLLLGVVSMVWPHGGAGC*WEGGHR
Trigger: ACGATGGCCACCTTCCCACCAGCAACCAGCGCCCCC...ATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGCCTGGATCCTGTCCTaGGTCCTCCTTCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVAWILS*VLLPPQ
Trigger: CTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCAACAAAAACAGGTGCTaGGGAGGGCCGTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVNKNRC*GGPCFM
Trigger: CATGAAACACGGCCCTCCCCAGCACCTGTTTTTGTT...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp CTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTGTCCCACAGCCCCCTTaGCCTGGGGACCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LRSPVSIAGCSVHGLASSVPQPP*PGDPPH
Trigger: ATGAGGTGGGTCCCCAGGCCAAGGGGGCTGTGGGAC...AGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GGGTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCTGTCCTTCCGGGTCATaGATTCATTCTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GCGKPAWILSWVLLPPQSCPSGS*IHSVAV
Trigger: CACAGCCACAGAATGAATCCATGACCCGGAAGGACA...GGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 72 bp CGTGCCCCTCGCTTCTTCCTCTCTGAATTCTGCAGCTaGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAPRFFLSEFCS*VTSFLSCPPGL
Trigger: CAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAGAGAGGAAGAAGCGAGGGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS-3UTR TCA 90 bp GGGTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCAATATGAGCCCTGAGTaGGCTAGGGCAAATCCCTTA +
Preference number: 4 (lower is better)
Translates to: GCGKPAWILSWVLLPPQSNMSPE*ARANPL
Trigger: TAAGGGATTTGCCCTAGCTCACTCAGGGCTCATATT...GGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTACTCTTTCCACAGGCTaGGATGCAAACGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: ASRPGSCPGSSFLRSPVSTLSTG*DANVMA
Trigger: TGCCATCACGTTTGCATCTCAGCCTGTGGAAAGAGT...AGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCGGAAGGTGGCCATCGTaGCTGGCTTGTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SFLRSPVSIAGCSVHGLAGRWPS*LACLPC
Trigger: GCAGGGAAGACAAGCCAGGCACGATGGCCACCTTCC...GGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp TCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCTGTCTCAGCGCCGTaGCCCTCGCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SFLRSPVSIAGCSVHGLASVSAP*PSLLPL
Trigger: GAGAGGAAGAAGCGAGGGGCACGGCGCTGAGACAGA...GGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTATCTGTCTCAGCGCCGTaGCCCTCGCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVSVSAP*PSLLPL
Trigger: GAGAGGAAGAAGCGAGGGGCACGGCGCTGAGACAGA...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTCACTCCCCATCTTaGACTTTTGCTAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVSHSPS*TFARVG
Trigger: TCCAACCCTAGCAAAAGTGCAAGATGGGGAGTGAGA...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTTCTATTTATTGTTGCTaGCACCCTGGAGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASRPGSCPGSSFLRSPVSSIYCC*HPGGAP
Trigger: TGGGGCTCCTCCAGGGTGGCAGCAACAATAAATAGA...AGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGTCACAGCGTAGACCCTaGAAGAGCAGGAACACTCCC +
Preference number: 4 (lower is better)
Translates to: GLDPVLGPPSSAVPSLLLSQRRP*KSRNTP
Trigger: GGGAGTGTTCCTGCTCTTGCAGGGTCTACGCTGTGA...CAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTTCACCCAGGCTGGAGTaGAATGGCACGATGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGSPRLE*NGTMSA
Trigger: AGCCGACATCGTGCCATTGCACTCCAGCCTGGGTGA...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTTCGGCCTCCTAAACTaGTGTGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPFGLLN*CDYRHE
Trigger: CTCATGCCTGTAATCACAGCAGTTTAGGAGGCCGAA...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTCAGATTCATCCAGGCTaGAGTCCTCGTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SCPGSSFLRSPVSIAGCSQIHPG*SPRPPG
Trigger: GCCCGGAGGACGAGGACTCCAGCCTGGATGAATCTG...ACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTCAGCAGCTTCTCTCTTaGTGCGACCTTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGQQLLS*CDLSGL
Trigger: GAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTG...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTTGGGGCGGTTGGTGTTaGCAGCAGCTTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGWGGWC*QQLLSW
Trigger: CCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCA...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGCTGGAAGGCTGAGGTaGGCAGATCATTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AWILSWVLLPPQSRLYCWAGRLR*ADHLRP
Trigger: TGGCCTCAAATGATCTGCCCACCTCAGCCTTCCAGC...CCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTTACTTCGGTCTTCTGTaGATGTCCTTGGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ASRPGSCPGSSFLRSPVSYFGLL*MSLGPH
Trigger: ATGGGGACCCAAGGACATCCACAGAAGACCGAAGTA...AGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGAGAGGAGGGTCGGCCTaGGGTGGAGGTCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: AVPSLLLGVVSMVWPHLQRGGSA*GGGQEM
Trigger: CATCTCCTGACCTCCACCCCAGGCCGACCCTCCTCT...CTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGCCATTTGCTCCCTaGGTTCTAGAGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: AGLDPVLGPPSSAVPSLLLPFAP*VLELMV
Trigger: CACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAG...CAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 72 bp GTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATaGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: VLGPPSSAVPSL*LGVVSMVWPHL
Trigger: GAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR TCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTAATGGAGCTGCCATTTaGACCCAGGAGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGNGAAI*TQEDLG
Trigger: CCCCAAGTCCTCCTGGGTTCAAATGGCAGCTCCATT...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCATCTGTCTCAGCGCCGTaGCCCTCGCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RSPVSIAGCSVHGLASSPSVSAP*PSLLPL
Trigger: GAGAGGAAGAAGCGAGGGGCACGGCGCTGAGACAGA...TGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp TTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCAGGATCTTCCTGGCTCTaGCCCTCCATTCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FLRSPVSIAGCSVHGLASGSSWL*PSIPSL
Trigger: GAGGCTGGGAATGGAGGGGCAGAGCCAGGAAGATCC...TGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTTCAACACAATGGAGCTaGCATTTGAACCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WQAGLDPVLGPPSSAVPSSTQWS*HLNPGG
Trigger: TCCTCCTGGGTTCAAATGGCAGCTCCATTGTGTTGA...AGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCATAAAACCCTGCTGTTaGCCAAGTTTTGGCTACCAC +
Preference number: 4 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVIKPCC*PSFGYH
Trigger: GTGGTAGCCAAAACTTGGGCAACAGCAGGGTTTTAT...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGCCACATGAACAGACTTaGCCTGAGATAGAATTAGGC +
Preference number: 4 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPPHEQT*PEIELG
Trigger: GCCTAATTCTATCTCAGGGCAAGTCTGTTCATGTGG...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CAAGCGATCCTCCCTCCTTGGCCTCCCAAAGGCTGGAAGGCTGAGGTGGGCAGAGTTGCTCCTGCCATTTaGTCCCTGGGTTCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: QAILPPWPPKGWKAEVGRVAPAI*SLGSRA
Trigger: AGCTCTAGAACCCAGGGAGCAAATGGCAGGAGCAAC...TCTGCCCACCTCAGCCTTCCAGCCTTTGGGAGGCCAAGGAGGGAGGATCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp CGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGGTGGCCATCGTGCCTaGCTTGTCTTCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RSPVSIAGCSVHGLASSPGGHRA*LVFPAS
Trigger: AGAGGCAGGGAAGACAAGCCAGGCACGATGGCCACC...TGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTCCAGATTCATCCAGGCTaGAGTCCTCGTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: VPSLLLGVVSMVWPHLQLQIHPG*SPRPPG
Trigger: GCCCGGAGGACGAGGACTCCAGCCTGGATGAATCTG...GAGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCAGCAGCTTCTCTCTTaGTGCGACCTTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSSFLRSPVSIAGCSVHGQQLLS*CDLSGL
Trigger: GAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTG...ACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTCTCAAGGGAAGGGGATaGATACAGGTCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGLKGRG*IQVPKG
Trigger: ACCCTTGGGGACCTGTATCCATCCCCTTCCCTTGAG...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp CAGCGCCGTGCCCCTCGCTTCTTCCTCTCTGAATTCTGCAGCTTGGTCACCAGTCAGGTGGTGTACACCTaGAGTTCCAGCCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: QRRAPRFFLSEFCSLVTSQVVYT*SSSHSG
Trigger: TCCTGAGTGGCTGGAACTTCAGGTGTACACCACCTG...ACTGGTGACCAAGCTGCAGAATTCAGAGAGGAAGAAGCGAGGGGCACGGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS-3UTR GCA 90 bp TCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGCAGCTTCTCTCTTGGTaGGACCTTTCCGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSFLRSPVSIAGCSVHGLQLLSW*DLSGLH
Trigger: GTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTG...CAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp TTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCAAGGTGTGAGCCACTGTaGCGGGGCTCGCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FLRSPVSIAGCSVHGLASRCEPL*RGSLFS
Trigger: AGAAAAGAGCGAGCCCCGGCACAGTGGCTCACACCT...TGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAAAAGGAAACAGGCTCTaGCCGGGGCCCAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVKGNRL*PGPNLR
Trigger: TCTGAGATTGGGCCCCGGGCAGAGCCTGTTTCCTTT...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCCGACTGCCTGGTGTTaGTCCTGCCATTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSAVPSLLLGVVSMVWPHPTAWC*SCHLLP
Trigger: AGGGAGCAAATGGCAGGAGCAACACCAGGCAGTCGG...ATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGCAGCAGCTTCTCTCTTaGTGCGACCTTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSFLRSPVSIAGCSVHGLQQLLS*CDLSGL
Trigger: GAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTG...CAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTACACACACCCAAGCTGTaGCTGCCGTGCGTGTCTATT +
Preference number: 4 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVHTPKL*LPCVSI
Trigger: AATAGACACGCACGGCAGCCACAGCTTGGGTGTGTG...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp AGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGTGGAAGCCATGTTTTaGGTGTGGCAGAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRPGSCPGSSFLRSPVSIVEAMF*VWQNSE
Trigger: CTCACTGTTCTGCCACACCCAAAACATGGCTTCCAC...AATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGAGCAGGAGAATAGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AVPSLLLGVVSMVWPHLQSRRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCTATTCTCCTGCT...CTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGCTGGCTTGTCTTCCCTaGCTCTCTTCTTCTCCTAAC +
Preference number: 4 (lower is better)
Translates to: WILSWVLLPPQSRLYCWVLACLP*LSSSPN
Trigger: GTTAGGAGAAGAAGAGAGGCAGGGAAGACAAGCCAG...CACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR GCA 90 bp TGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGCACCCAAGCTGTGGCTaGCGTGCGTGTCTATTTATT +
Preference number: 4 (lower is better)
Translates to: WILSWVLLPPQSRLYCWVHPSCG*RACLFI
Trigger: AATAAATAGACACGCACGGCAGCCACAGCTTGGGTG...CACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTATCAACAAAAACAGGTaGTGGGGAGGGCCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGINKNR*WGGPCF
Trigger: GAAACACGGCCCTCCCCAGCACCTGTTTTTGTTGAT...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAACGATGTCGGCTCACTaGAACCTCTACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RSPVSIAGCSVHGLASSPTMSAH*NLYLLG
Trigger: ACCCAGGAGGTAGAGGTTGCAGTGAGCCGACATCGT...TGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp AGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTATGGTTTCACTCTATTaGTCAGGCTGCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SRPGSCPGSSFLRSPVSIMVSLY*SGCSAV
Trigger: CACTGCACTGCAGCCTGAGCAATAGAGTGAAACCAT...AATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GGCAGCAGCTTCTCTCTTGGTGCGACCTTTCCGGCCTCCACCTCCACTGCAGGTCTGAATTCTGCAGCTTaGTCACCAGTTTCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GSSFSLGATFPASTSTAGLNSAA*SPVSSR
Trigger: ACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAG...ACCTGCAGTGGAGGTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS-3UTR CCA 90 bp GCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGTGTAGCTTTCTTTTCTaGGGGATCTTCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AWILSWVLLPPQSRLYCWCSFLF*GIFLAL
Trigger: CAGAGCCAGGAAGATCCCCCAGAAAAGAAAGCTACA...CCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGCGTGATGGCAGGTATTaGAGTAGCTATTTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AWILSWVLLPPQSRLYCWRDGRY*SSYFGP
Trigger: AGGCCCAAAATAGCTACTCCAATACCTGCCATCACG...CCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGCCAAGTTCTGCAGTGTaGGGCTTATGTGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: WILSWVLLPPQSRLYCWVPSSAV*GLCERD
Trigger: GTCCCTTTCACATAAGCCCCACACTGCAGAACTTGG...CACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 72 bp CACACCCAAGCTGTGGCTGCCGTGCGTGTCTATTTATaGTTGCTGCCACCCTGGAGGAGCCCCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HTQAVAAVRVYL*LLPPWRSPSFF
Trigger: GAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAAATAGACACGCACGGCAGCCACAGCTTGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp CTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTAAGCTGGTCGTAGTCTaGCGTGCATCTGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LRSPVSIAGCSVHGLASSKLVVV*RASVPA
Trigger: AGCAGGAACAGATGCACGTCAGACTACGACCAGCTT...AGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTTGGAGGCAAAATCTaGAGGATTTCCAAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: AWILSWVLLPPQSRLYCWVGGKI*RISKVD
Trigger: GTCTACCTTGGAAATCCTTCAGATTTTGCCTCCAAC...CCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CCATTCCCAGCCTCTCACTCCCCATCTTGCACTTTTGCTAGGGTTGGAGGCGCTTTCAAGCGATTCTACTaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PFPASHSPSCTFARVGGAFKRFY*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGTAGAATCGCTTGAA...AGCGCCTCCAACCCTAGCAAAAGTGCAAGATGGGGAGTGAGAGGCTGGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp ATTCCTGGTTCCAGTCATATCAGGATTCTATTTGTCCCTCTCAGCAGCACAGGCGGGGGCGCTGGTTGCTaGTGGGAAGGTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: IPGSSHIRILFVPLSSTGGGAGC*WEGGHR
Trigger: ACGATGGCCACCTTCCCACCAGCAACCAGCGCCCCC...GCCTGTGCTGCTGAGAGGGACAAATAGAATCCTGATATGACTGGAACCAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 72 bp ACCCAAGCTGTGGCTGCCGTGCGTGTCTATTTATTGTaGCTGCCACCCTGGAGGAGCCCCAGTTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TQAVAAVRVYLL*LPPWRSPSFFC
Trigger: ACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAAATAGACACGCACGGCAGCCACAGCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 72 bp ACAAGCAGAGGCAATCCCACTGTTGCGTGGGGAGAGTaGGGCCAGAGGTCCTTAAATGTCCTTCCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: TSRGNPTVAWGE*GQRSLNVLPGH
Trigger: ATGACCCGGAAGGACATTTAAGGACCTCTGGCCCAACTCTCCCCACGCAACAGTGGGATTGCCTCTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGTGTCTATTTATTGTTaGTGCCACCCTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSPVSIAGCSVHGLASSPVSIYC*CHPGGA
Trigger: GGCTCCTCCAGGGTGGCAGCAACAATAAATAGACAC...TGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTCGGGATTACAGGCACCTaGCACCATGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: VPSLLLGVVSMVWPHLQLGITGT*HHAWLI
Trigger: AATTAGCCAAGCATGGTGGCAGGTGCCTGTAATCCC...GAGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTTCCACAGGCTGAGATaGAAACGTGATGGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SFLRSPVSIAGCSVHGLAFHRLR*KRDGRY
Trigger: ATACCTGCCATCACGTTTGCATCTCAGCCTGTGGAA...GGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTACTGAATTCTGCAGCTTaGTCACCAGTTTCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVLNSAA*SPVSSR
Trigger: ACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAG...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR TCA 90 bp TGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTCCTGGCCAACATGGTaGAACTCTGTTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: WILSWVLLPPQSRLYCWVSWPTW*NSVSTK
Trigger: TTTAGTAGAAACAGAGTTTCACCATGTTGGCCAGGA...CACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp GCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGGTTTCCAGGATTTTCTaGAGCCAACACACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AVPSLLLGVVSMVWPHLQVSRIF*SQHTRS
Trigger: AGACCTGGTGTGTTGGCTTCAGAAAATCCTGGAAAC...CTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp AGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTCTGGCTTGTCTTCCCTaGCTCTCTTCTTCTCCTAAC +
Preference number: 4 (lower is better)
Translates to: SPVSIAGCSVHGLASSPALACLP*LSSSPN
Trigger: GTTAGGAGAAGAAGAGAGGCAGGGAAGACAAGCCAG...AGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CCA 90 bp TTATTGTTGCTGCCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCTTTCTTTTCACAGCCCCCTTGGCCTaGGGACCCACCTCATATCTG +
Preference number: 4 (lower is better)
Translates to: LLLLPPWRSPSFFCSFLFTAPLA*GPTSYL
Trigger: CAGATATGAGGTGGGTCCCCAGGCCAAGGGGGCTGT...GAAAAGAAAGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGAATCCTCAACACAATaGAGCTGCCATTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVESSTQ*SCHLNP
Trigger: TGGGTTCAAATGGCAGCTCCATTGTGTTGAGGATTC...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 72 bp GCCCTATTCCTGGTTCCAGTCATATCAGGATTCTATTaGTCCCTCTCAGCAGCACAGGCCTCCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: ALFLVPVISGFY*SLSAAQASSSI
Trigger: GATGCTGCTGGAGGCCTGTGCTGCTGAGAGGGACAAATAGAATCCTGATATGACTGGAACCAGGAATAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCACTCTCTCTGGCCAGGAGGCGGAGGTTaGAGTGAGCTGCGATCATGC +
Preference number: 4 (lower is better)
Translates to: SACGQCFLLASSCIHSLWPGGGG*SELRSC
Trigger: GCATGATCGCAGCTCACTGCAACCTCCGCCTCCTGG...CCAGAGAGAGTGAATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TTATTGTTGCTGCCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCTTTCTTTTCGCCTGGTGTTGCTCCTaGCATTTGCTCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLLLPPWRSPSFFCSFLFAWCCS*HLLPGF
Trigger: GAACCCAGGGAGCAAATGGCAGGAGCAACACCAGGC...GAAAAGAAAGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp GGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGTGAGTAAAAATAGCTaGAATCCTCAACACAATGGA +
Preference number: 4 (lower is better)
Translates to: GLDPVLGPPSSAVPSLLLVSKNS*NPQHNG
Trigger: TCCATTGTGTTGAGGATTCCAGCTATTTTTACTCAC...CAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TGTAGCAAGTTCCCCCTCCATAGTGGTATTCAAACAAGCAGAGGCAATCCCACTAATCCCACTGTTGCGTaGGGAGAGTTGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CSKFPLHSGIQTSRGNPTNPTVA*GELGQR
Trigger: CCTCTGGCCCAACTCTCCCCACGCAACAGTGGGATT...AGTGGGATTGCCTCTGCTTGTTTGAATACCACTATGGAGGGGGAACTTGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp TGTAGCAAGTTCCCCCTCCATAGTGGTATTCAAACAAGCAGAGGCAATCCCACTGTCCTTGGGTCCCCATaGACCACTGACTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: CSKFPLHSGIQTSRGNPTVLGSP*TTDSKF
Trigger: GAACTTGGAGTCAGTGGTTCATGGGGACCCAAGGAC...AGTGGGATTGCCTCTGCTTGTTTGAATACCACTATGGAGGGGGAACTTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp CGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCATTGTTTGAGTTGTTGTaGTCACACTACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RSPVSIAGCSVHGLASSPLFELL*SHYCTP
Trigger: TGGAGTGCAGTAGTGTGATCACAACAACTCAAACAA...TGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS-3UTR GCA 90 bp ATTCCTGGTTCCAGTCATATCAGGATTCTATTTGTCCCTCTCAGCAGCACAGGCCTCGGCCTCCCAAAGTaGTGGGATTGCAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: IPGSSHIRILFVPLSSTGLGLPK*WDCRYE
Trigger: CTCATACCTGCAATCCCAGCACTTTGGGAGGCCGAG...GCCTGTGCTGCTGAGAGGGACAAATAGAATCCTGATATGACTGGAACCAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TTTAGGATTCTTCATTGTCAATACATGGTTCTTCCCAGGCATGTAGCAAAGGGGTGTGGCAAGCCGGCCTaGATCCTGTCCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FRILHCQYMVLPRHVAKGCGKPA*ILSWVL
Trigger: GAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACA...CCCCTTTGCTACATGCCTGGGAAGAACCATGTATTGACAATGAAGAATCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCACTCTCTCTGGGCTGGAGTGAGATCATaGCTCACTGCAGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SACGQCFLLASSCIHSLWAGVRS*LTAAST
Trigger: GGTGGAGGCTGCAGTGAGCCATGATCTCACTCCAGC...CCAGAGAGAGTGAATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp TTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCAAATCTCAGTTTTCTCTaGCTTTTAGATGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: FLRSPVSIAGCSVHGLASNLSFL*LLDGTH
Trigger: ATGAGTGCCATCTAAAAGTCAGAGAAAACTGAGATT...TGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp CTGCCATTTGCTCCCTGGGTTCTAGAGCTGATGGTGGCCCTATTCCTGGTTCCAAATACACATCAAAGATaGTCTCTCAGGCTCATGAAT +
Preference number: 4 (lower is better)
Translates to: LPFAPWVLELMVALFLVPNTHQR*SLRLMN
Trigger: ATTCATGAGCCTGAGAGAGCATCTTTGATGTGTATT...TGGAACCAGGAATAGGGCCACCATCAGCTCTAGAACCCAGGGAGCAAATGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TTATTGTTGCTGCCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCTTTCTTTTCTGGTGGCCCTATTCCTaGTTCCAGTCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLLLPPWRSPSFFCSFLFWWPYS*FQSYQD
Trigger: ATCCTGATATGACTGGAACCAGGAATAGGGCCACCA...GAAAAGAAAGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTTCTACTTTTAGATTATGCCCTAAAATTGAAGAGGTGTGGCCTCCTCTGTCTCAGGGCCTTGGTATGTTaGCTAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: VLLLDYALKLKRCGLLCLRALVC*LGWSRT
Trigger: AGTTCGAGACCAGCCTAGGCAACATACCAAGGCCCT...GAGACAGAGGAGGCCACACCTCTTCAATTTTAGGGCATAATCTAAAAGTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR TCA 90 bp TCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCACTCTCTCTGGGGTGTGGCAGAACAGTaGGTAAAAATAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: SACGQCFLLASSCIHSLWGVAEQ*VKIAGI
Trigger: GATTCCAGCTATTTTTACTCACTGTTCTGCCACACC...CCAGAGAGAGTGAATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp GTTCTACTTTTAGATTATGCCCTAAAATTGAAGAGGTGTGGCCTCCTCTGTCTCAGCAGGAACACTCCCTaGCCCAGATACATACACCAA +
Preference number: 4 (lower is better)
Translates to: VLLLDYALKLKRCGLLCLSRNTP*PRYIHQ
Trigger: TTGGTGTATGTATCTGGGGCAGGGAGTGTTCCTGCT...GAGACAGAGGAGGCCACACCTCTTCAATTTTAGGGCATAATCTAAAAGTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCACTCTCTCTGGTTTTGGGCCTCAAAGTaGAAGCCATGTTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SACGQCFLLASSCIHSLWFWASK*KPCFGC
Trigger: ACACCCAAAACATGGCTTCCACTTTGAGGCCCAAAA...CCAGAGAGAGTGAATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TTTAGGATTCTTCATTGTCAATACATGGTTCTTCCCAGGCATGTAGCAAAGGGGACGTGCATCTGTTCCTaGTCTATCAGGTACTTCGGT +
Preference number: 4 (lower is better)
Translates to: FRILHCQYMVLPRHVAKGTCICS*SIRYFG
Trigger: ACCGAAGTACCTGATAGAGCAGGAACAGATGCACGT...CCCCTTTGCTACATGCCTGGGAAGAACCATGTATTGACAATGAAGAATCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp ACATCTGTTGAGTCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCTGAATTCTGCAGCTTaGTCACCAGTTTCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: TSVESACGQCFLLASSCILNSAA*SPVSSR
Trigger: ACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAG...AATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGACTCAACAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR GCA 90 bp TTTAGGATTCTTCATTGTCAATACATGGTTCTTCCCAGGCATGTAGCAAAGGGGAGGCAAGCACACACATaGCCGAACAAAAACACACAA +
Preference number: 4 (lower is better)
Translates to: FRILHCQYMVLPRHVAKGRQAHT*PNKNTQ
Trigger: TTGTGTGTTTTTGTTCGGGCATGTGTGTGCTTGCCT...CCCCTTTGCTACATGCCTGGGAAGAACCATGTATTGACAATGAAGAATCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CCA 90 bp TTTAGGATTCTTCATTGTCAATACATGGTTCTTCCCAGGCATGTAGCAAAGGGGTGTATTCACTCTCTCTaGTTCCCTTTCATCATAAAA +
Preference number: 4 (lower is better)
Translates to: FRILHCQYMVLPRHVAKGCIHSL*FPFIIK
Trigger: TTTTATGATGAAAGGGAACCAGAGAGAGTGAATACA...CCCCTTTGCTACATGCCTGGGAAGAACCATGTATTGACAATGAAGAATCCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
3UTR CAA 72 bp GGGCTAAGTAAGAGAGGAGTAACTTTGTATCCTGTTTaGATTCTTCATAATAGCAACCCAAACCTGTATCTC +
Preference number: 4 (lower is better)
Translates to: GLSKRGVTLYPV*ILHNSNPNLYL
Trigger: GAGATACAGGTTTGGGTTGCTATTATGAAGAATCAAAACAGGATACAAAGTTACTCCTCTCTTACTTAGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS CCA 90 bp GATTCATCCAGGCTGGAGTCCTCGTCCTCCGGGCCTGGGGGCTGCTaGGGGGCGCTGGTTGCTGGTGGGAAGGTGGCCATCGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: DSSRLESSSSGPGGC*GALVAGGKVAIVPG
Trigger: GCCAGGCACGATGGCCACCTTCCCACCAGCAACCAGCGCCCCCCAGCAGCCCCCAGGCCCGGAGGACGAGGACTCCAGCCTGGATGAATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCGCCGACTGCCTGGTGTaGCTCCTGCCATTTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLADCLV*LLPFAP
Trigger: GGGAGCAAATGGCAGGAGCAACACCAGGCAGTCGGC...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCGCAGCAGCTTCTCTCTaGGTGCGACCTTTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: VASRPGSCPGSSFLRSPVAAASL*VRPFRP
Trigger: AGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGC...GACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp GCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGGCGGTTGGTGTaGGCAGCAGCTTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: AGLDPVLGPPSSAVPSLLLGRLV*AAASLL
Trigger: CAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAG...CAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp GTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGCTCCCCCGACATCTGTaGAGTCTGCATGTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: VWQAGLDPVLGPPSSAVPLPRHL*SLHVGN
Trigger: ATTGCCCACATGCAGACTCAACAGATGTCGGGGGAG...CGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp AGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCCATCGTGCCTGGCTaGTCTTCCCTGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SRPGSCPGSSFLRSPVSIAIVPG*SSLPLF
Trigger: GAAGAGAGGCAGGGAAGACAAGCCAGGCACGATGGC...AATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp GGTGTGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCCGTGTCTATTTATTGTaGCTGCCACCCTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GVASRPGSCPGSSFLRSPRVYLL*LPPWRS
Trigger: GCTCCTCCAGGGTGGCAGCAACAATAAATAGACACG...GGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GTTGGCAGCAGCTTCTCTCTTGGTGCGACCTTTCCGGCCTCCACCTCCACTGCAGCAGCAGCTTCTCTCTaGGTGCGACCTTTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: VGSSFSLGATFPASTSTAAAASL*VRPFRP
Trigger: AGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGC...TGCAGTGGAGGTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS-3UTR CAA 90 bp TCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCGCCATCGTGCCTGGCTaGTCTTCCCTGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SFLRSPVSIAGCSVHGLAAIVPG*SSLPLF
Trigger: GAAGAGAGGCAGGGAAGACAAGCCAGGCACGATGGC...GGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp TCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCCTGGGGCGGTTGGTGTaGGCAGCAGCTTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: SFLRSPVSIAGCSVHGLALGRLV*AAASLL
Trigger: CAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAG...GGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS TCA 90 bp ACCTTTCCGGCCTCCACCTCCTGTAACCAAGGCAGGAGTCAGAGGTaGAGTGGGCATAGGCATGATGAGAGGCCCGAGGTAGGAATGGGC +
Preference number: 5 (lower is better)
Translates to: TFPASTSCNQGRSQR*SGHRHDERPEVGMG
Trigger: GCCCATTCCTACCTCGGGCCTCTCATCATGCCTATGCCCACTTCACCTCTGACTCCTGCCTTGGTTACAGGAGGTGGAGGCCGGAAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395641.2
CDS-3UTR CAA 90 bp TCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATGCCATCGTGCCTGGCTaGTCTTCCCTGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSAVPSLLLGVVSMVWPHAIVPG*SSLPLF
Trigger: GAAGAGAGGCAGGGAAGACAAGCCAGGCACGATGGC...ATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp GCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGTCTGAATTCTGCAGCTaGGTCACCAGTTTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: AGLDPVLGPPSSAVPSLLSEFCS*VTSFLS
Trigger: CGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAGA...CAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp CTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTAAGCAGGAGAATAGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LDPVLGPPSSAVPSLLLGKQENS*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCTATTCTCCTGCTT...ACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp TCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTCCCCATCTTGCACTTTaGCTAGGGTTGGAGGCGCTT +
Preference number: 5 (lower is better)
Translates to: SCPGSSFLRSPVSIAGCSPHLAL*LGLEAL
Trigger: AAGCGCCTCCAACCCTAGCAAAAGTGCAAGATGGGG...ACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp TGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGGTGCGTGTCTATTTATaGTTGCTGCCACCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: WILSWVLLPPQSRLYCWVVRVYL*LLPPWR
Trigger: CCTCCAGGGTGGCAGCAACAATAAATAGACACGCAC...CACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGCTCCAGGGCCTTGGTATGTaGCCTAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: VPSLLLGVVSMVWPHLQLQGLGM*PRLVSN
Trigger: GTTCGAGACCAGCCTAGGCAACATACCAAGGCCCTG...GAGCTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp CAAGCGATCCTCCCTCCTTGGCCTCCCAAAGGCTGGAAGGCTGAGGTGGGCAGACATGGTTTCACTCTATaGCTCAGGCTGCAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: QAILPPWPPKGWKAEVGRHGFTL*LRLQCS
Trigger: ACTGCACTGCAGCCTGAGCAATAGAGTGAAACCATG...TCTGCCCACCTCAGCCTTCCAGCCTTTGGGAGGCCAAGGAGGGAGGATCGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTACTTCTGTGGATGTCCTaGGGTCCCCATGAACCACTG +
Preference number: 5 (lower is better)
Translates to: DPVLGPPSSAVPSLLLGVLLWMS*GPHEPL
Trigger: CAGTGGTTCATGGGGACCCAAGGACATCCACAGAAG...TACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCGAGATGGGTGGAGGATaGCAAGTTAAGGAAAACTTT +
Preference number: 5 (lower is better)
Translates to: GKPAWILSWVLLPPQSRLEMGGG*QVKENF
Trigger: AAAGTTTTCCTTAACTTGCAATCCTCCACCCATCTC...GAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp CTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTGCAGTCCCGTCTCTATaGCTGGGTGTAGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: LRSPVSIAGCSVHGLASSAVPSL*LGVVSM
Trigger: CATGGACACTACACCCAGCAATAGAGACGGGACTGC...AGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp GCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGCATAAAACCCTGCTGTaGCCCAAGTTTTGGCTACCA +
Preference number: 5 (lower is better)
Translates to: AWILSWVLLPPQSRLYCWHKTLL*PKFWLP
Trigger: TGGTAGCCAAAACTTGGGCAACAGCAGGGTTTTATG...CCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTCTATTGGTATGGAAAGAGGAGTaGGAGGCAAAATCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: AGLDPVLGPPSSAVPSLLVWKEE*EAKSEG
Trigger: TCCTTCAGATTTTGCCTCCAACTCCTCTTTCCATAC...CAATAGAGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS TCA 90 bp TTGAGCCCAGGAGTTCGAGGCTGCGGTGAGTTGTTTGAGTTGTTGTaGTCACACTACTGCACTCCAGCCGAGGTAGGAATGGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LSPGVRGCGELFELL*SHYCTPAEVGMGQA
Trigger: AGCCTGGCCCATTCCTACCTCGGCTGGAGTGCAGTAGTGTGATCACAACAACTCAAACAACTCACCGCAGCCTCGAACTCCTGGGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1
CDS GCA 90 bp TGGTTGCTGGTGGGAAGGTGGCCATCGTGCCTGGCTTGTCTTCCCTaGCTCTCTTCTTCTCCTAACGCTTTGTCTGTCTCTGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: WLLVGRWPSCLACLP*LSSSPNALSVSAFL
Trigger: CAGGAAAGCAGAGACAGACAAAGCGTTAGGAGAAGAAGAGAGGCAGGGAAGACAAGCCAGGCACGATGGCCACCTTCCCACCAGCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324873.8
ENST00000395641.2
CDS-3UTR CAA 90 bp GCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGTCTGAATTCTGCAGCTaGGTCACCAGTTTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: AVPSLLLGVVSMVWPHLQSEFCS*VTSFLS
Trigger: CGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAGA...CTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS-3UTR CAA 90 bp TGGCAAGCCGGCCTGGATCCTGTCCTGGGTCCTCCTTCCTCCGCAGTCCCGTCTGAGTTAATATGTAACTaGTATGGAAAGAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: WQAGLDPVLGPPSSAVPSELICN*YGKRSW
Trigger: CCAACTCCTCTTTCCATACAAGTTACATATTAACTC...AGACGGGACTGCGGAGGAAGGAGGACCCAGGACAGGATCCAGGCCGGCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATCTCCAGTCTTCTCCTAACGCTTaGTCTGTCTCTGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: AVPSLLLGVVSMVWPHLQSSPNA*SVSAFL
Trigger: CAGGAAAGCAGAGACAGACAAAGCGTTAGGAGAAGA...CTGGAGATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324873.8
ENST00000395641.2
CDS-3UTR CAA 90 bp TCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGGCCTCATTCTTCTCCTAACGCTTaGTCTGTCTCTGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: SSAVPSLLLGVVSMVWPHSSPNA*SVSAFL
Trigger: CAGGAAAGCAGAGACAGACAAAGCGTTAGGAGAAGA...ATGAGGCCAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324873.8
ENST00000395641.2
CDS-3UTR CAA 90 bp TTATTGTTGCTGCCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCTTTCTTTTCCTGGGGCGGTTGGTGTaGGCAGCAGCTTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLLLPPWRSPSFFCSFLFLGRLV*AAASLL
Trigger: CAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAG...GAAAAGAAAGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp TCCTCCTTCCTCCGCAGTCCCGTCTCTATTGCTGGGTGTAGTGTCCATGGTCTGATATCAGGATTCTATTaGTCCCTCTCAGCAGCACAG +
Preference number: 5 (lower is better)
Translates to: SSFLRSPVSIAGCSVHGLISGFY*SLSAAQ
Trigger: CTGTGCTGCTGAGAGGGACAAATAGAATCCTGATAT...CAGACCATGGACACTACACCCAGCAATAGAGACGGGACTGCGGAGGAAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp ATTCCTGGTTCCAGTCATATCAGGATTCTATTTGTCCCTCTCAGCAGCACAGGCGCAGTCCCGTCTCTATaGCTGGGTGTAGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: IPGSSHIRILFVPLSSTGAVPSL*LGVVSM
Trigger: CATGGACACTACACCCAGCAATAGAGACGGGACTGC...GCCTGTGCTGCTGAGAGGGACAAATAGAATCCTGATATGACTGGAACCAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp CCATTCCCAGCCTCTCACTCCCCATCTTGCACTTTTGCTAGGGTTGGAGGCGCTTGTGGGCAATGTTTCTaGCTAGCTTCTTCGTGTATT +
Preference number: 5 (lower is better)
Translates to: PFPASHSPSCTFARVGGACGQCF*LASSCI
Trigger: AATACACGAAGAAGCTAGCAAGAAACATTGCCCACA...AGCGCCTCCAACCCTAGCAAAAGTGCAAGATGGGGAGTGAGAGGCTGGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp ATTCCTGGTTCCAGTCATATCAGGATTCTATTTGTCCCTCTCAGCAGCACAGGCGTTGCGTGGGGAGAGTaGGGCCAGAGGTCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: IPGSSHIRILFVPLSSTGVAWGE*GQRSLN
Trigger: ATTTAAGGACCTCTGGCCCAACTCTCCCCACGCAAC...GCCTGTGCTGCTGAGAGGGACAAATAGAATCCTGATATGACTGGAACCAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp GTTCTACTTTTAGATTATGCCCTAAAATTGAAGAGGTGTGGCCTCCTCTGTCTCGCAGCAGCTTCTCTCTaGGTGCGACCTTTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: VLLLDYALKLKRCGLLCLAAASL*VRPFRP
Trigger: AGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGC...GAGACAGAGGAGGCCACACCTCTTCAATTTTAGGGCATAATCTAAAAGTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp TTATTGTTGCTGCCACCCTGGAGGAGCCCCAGTTTCTTCTGTAGCTTTCTTTTCTGCAATGGCGTGATCTaGGCTCACCACAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLLLPPWRSPSFFCSFLFCNGVI*AHHNFC
Trigger: GCAGAAGTTGTGGTGAGCCAAGATCACGCCATTGCA...GAAAAGAAAGCTACAGAAGAAACTGGGGCTCCTCCAGGGTGGCAGCAACAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS-3UTR CAA 90 bp ACATCTGTTGAGTCTGCATGTGGGCAATGTTTCTTGCTAGCTTCTTCGTGTATTCAATGGAGCTGCCATTaGAACCCAGGAGGACTTGGG +
Preference number: 5 (lower is better)
Translates to: TSVESACGQCFLLASSCIQWSCH*NPGGLG
Trigger: CCCAAGTCCTCCTGGGTTCAAATGGCAGCTCCATTG...AATACACGAAGAAGCTAGCAAGAAACATTGCCCACATGCAGACTCAACAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS CCA 72 bp AGGCTGGAGTCCTCGTCCTCCGGGCCTGGGGGCTGCTaGGGGGCGCTGGTTGCTGGTGGGAAGGTGGCCATC +
Preference number: 6 (lower is better)
Translates to: RLESSSSGPGGC*GALVAGGKVAI
Trigger: GATGGCCACCTTCCCACCAGCAACCAGCGCCCCCCAGCAGCCCCCAGGCCCGGAGGACGAGGACTCCAGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324873.8
ENST00000395641.2
ENST00000567646.1
CDS GCA 72 bp TGGGGCGGTTGGTGTTGGCAGCAGCTTCTCTCTTGGTaGGACCTTTCCGGCCTCCACCTCCGAGGTAGGAAT +
Preference number: 6 (lower is better)
Translates to: WGGWCWQQLLSW*DLSGLHLRGRN
Trigger: ATTCCTACCTCGGAGGTGGAGGCCGGAAAGGTCGCACCAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324873.8
CDS GCA 72 bp GTGGGAAGGTGGCCATCGTGCCTGGCTTGTCTTCCCTaGCTCTCTTCTTCTCCTAACGCTTTGTCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: VGRWPSCLACLP*LSSSPNALSVS
Trigger: AGAGACAGACAAAGCGTTAGGAGAAGAAGAGAGGCAGGGAAGACAAGCCAGGCACGATGGCCACCTTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324873.8
ENST00000395641.2
CDS TCA 72 bp GGAGTTCGAGGCTGCGGTGAGTTGTTTGAGTTGTTGTaGTCACACTACTGCACTCCAGCCGAGGTAGGAATG +
Preference number: 6 (lower is better)
Translates to: GVRGCGELFELL*SHYCTPAEVGM
Trigger: CATTCCTACCTCGGCTGGAGTGCAGTAGTGTGATCACAACAACTCAAACAACTCACCGCAGCCTCGAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567646.1