RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP98 (Homo sapiens)

Ensembl gene IDs: ENSG00000110713

Ensembl transcript IDs: ENST00000324932.12, ENST00000355260.7, ENST00000359171.8, ENST00000397004.8, ENST00000397007.8, ENST00000397013.2, ENST00000429801.5, ENST00000461047.2, ENST00000469881.1, ENST00000482690.1, ENST00000483285.1, ENST00000488828.1, ENST00000524563.1, ENST00000527104.5, ENST00000529063.1, ENST00000529379.1, ENST00000530345.1, ENST00000530516.1, ENST00000532475.1, ENST00000533346.5, ENST00000650171.1

Found 1773 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGGGAGCCAAGAGGCGCAAAGGGACTCGCTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGGAGGATGATGCAGACTCAGCACCAC +
Preference number: 1 (lower is better)
Translates to: VGSQEAQRDSLRVWC*VGGSIRRMMQTQHH
Trigger: GTGGTGCTGAGTCTGCATCATCCTCCTGATAGAACCTCCGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCGCCTCTTGGCTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp TGGCCCACTCCCAGAGCCCCTCACTTTCAAGCTGGCCAGCGTAACTaGCCTGTAGCACACCTTCACACTGCGCTGAGAGATGGGTGTAGT +
Preference number: 1 (lower is better)
Translates to: WPTPRAPHFQAGQRN*PVAHLHTALRDGCS
Trigger: ACTACACCCATCTCTCAGCGCAGTGTGAAGGTGTGCTACAGGCCAGTTACGCTGGCCAGCTTGAAAGTGAGGGGCTCTGGGAGTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 90 bp AAGATGCGCAGTCTCTCATCCTGGATGAAGGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGCATGGTGAGCAGCTCCCGGACTGAC +
Preference number: 1 (lower is better)
Translates to: KMRSLSSWMKESAWS*CQSTNCMVSSSRTD
Trigger: GTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp CCTTCTCACGTATGCCTGAGTTGTCAATGTGCAGGAGGACAAAGATaGCCCACTCCCAGAGCCCCTCACTTTCAAGCTGGCCAGCGTAAC +
Preference number: 1 (lower is better)
Translates to: PSHVCLSCQCAGGQR*PTPRAPHFQAGQRN
Trigger: GTTACGCTGGCCAGCTTGAAAGTGAGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAGGCATACGTGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 90 bp CAACAGAGCAAAGATGCGCAGTCTCTCATCCTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTCCACCAACTGCATGGTGAGCAGCTC +
Preference number: 1 (lower is better)
Translates to: QQSKDAQSLILDEGV*LELMPVHQLHGEQL
Trigger: GAGCTGCTCACCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 90 bp AAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGAACAGCCTTCTCACGTATGCCTGAG +
Preference number: 1 (lower is better)
Translates to: KVSLAQDSGVSNSWQ*RVSSSRTAFSRMPE
Trigger: CTCAGGCATACGTGAGAAGGCTGTTCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 90 bp GTTTTCCAGCCAACAGAGCAAAGATGCGCAGTCTCTCATCCTGGATaGAGGAGTCTGCTTGGAGCTGATGCCAGTCCACCAACTGCATGG +
Preference number: 1 (lower is better)
Translates to: VFQPTEQRCAVSHPG*RSLLGADASPPTAW
Trigger: CCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTGGCTGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 90 bp CAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAAGGGCCTCTAAGTaGTTGTCAGATTCCATGTGTGCTCGCACAGCTTTGGCCTCGTGG +
Preference number: 1 (lower is better)
Translates to: QRFQCSALNKQRASK*LSDSMCARTALASW
Trigger: CCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACTTAGAGGCCCTTTGCTTATTTAAGGCTGAGCACTGGAACCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 90 bp CCAGGTAAACAAGCCCAGATGTTTCCCAATCCTGAATTAGGCTGCTaGGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGT +
Preference number: 1 (lower is better)
Translates to: PGKQAQMFPNPELGC*ALEVPGLPRTPSGS
Trigger: ACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATCTGGGCTTGTTTACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 90 bp AGTCCAGGTAAACAAGCCCAGATGTTTCCCAATCCTGAATTAGGCTaGTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGT +
Preference number: 1 (lower is better)
Translates to: SPGKQAQMFPNPELG*CALEVPGLPRTPSG
Trigger: ACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATCTGGGCTTGTTTACCTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp GTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGCTCTCGAACAGCCTTCTCACGTATG +
Preference number: 1 (lower is better)
Translates to: VRKVSLAQDSGVSNS*QCRVSSSRTAFSRM
Trigger: CATACGTGAGAAGGCTGTTCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTTCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTaGTGTGAATGGGCATGTGACTGTGATGCAAAGTGCCTGGGGCTC +
Preference number: 1 (lower is better)
Translates to: EWQTVPIQTRQGTSV*CEWACDCDAKCLGL
Trigger: GAGCCCCAGGCACTTTGCATCACAGTCACATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp GAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCAC +
Preference number: 1 (lower is better)
Translates to: EALMLRSVLRKALNK*RMLLLAAGREGRCH
Trigger: GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR CCA 90 bp ACAGCTTTGGCCTCGTGGATCCATTTGGCAGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAAC +
Preference number: 1 (lower is better)
Translates to: TALASWIHLAGTRSF*VRKVSLAQDSGVSN
Trigger: GTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp AAGTGCTTGTCAGATTCCATGTGTGCTCGCACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTC +
Preference number: 1 (lower is better)
Translates to: KCLSDSMCARTALAS*IHLAGTRSFWVRKV
Trigger: GACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp AGCGCCCTAGAAATGGAGGCTGTTGGTGGAAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTCCAATCCAACTGGGAGCACACGTTT +
Preference number: 1 (lower is better)
Translates to: SALEMEAVGGSKYQR*IARERFQSNWEHTF
Trigger: AAACGTGTGCTCCCAGTTGGATTGGAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCTTCCACCAACAGCCTCCATTTCTAGGGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 90 bp TCCGGAAGAGAGGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAGCCTGCTGGGCAGCAGAAGCATTTG +
Preference number: 1 (lower is better)
Translates to: SGREESLQKVSMLDY*CAAGEQPAGQQKHL
Trigger: CAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCCTCTCTTCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR GCA 90 bp AAAGGTGAGTATGTTAGACTATTGATGTGCTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTTGGATCTGTCAAAGCTACTGGGGCC +
Preference number: 1 (lower is better)
Translates to: KGEYVRLLMCCWRTA*WAAEAFGSVKATGA
Trigger: GGCCCCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR GCA 90 bp ATAGCCAGGGAGCGTTTCCAATCCAACTGGGAGCACACGTTTATTTaGTTCTTTTCTGAGAGCTGCCACACCGGTTTTCCAGCCAACAGA +
Preference number: 1 (lower is better)
Translates to: IARERFQSNWEHTFI*FFSESCHTGFPANR
Trigger: TCTGTTGGCTGGAAAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACGCTCCCTGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp TGCCTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATaGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGA +
Preference number: 1 (lower is better)
Translates to: CLPQSWFVFASGRGR*RVGNALELTWDEQG
Trigger: TCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR TCA 90 bp TTATCCAAACTCTGCAGGCAAATCCAGACAGAGTCTCAGCAAGACTaGAAACCAGGGACCAAACCAAACTCTGGGAGCTTCCCACAGACA +
Preference number: 1 (lower is better)
Translates to: LSKLCRQIQTESQQD*KPGTKPNSGSFPQT
Trigger: TGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCTGGATTTGCCTGCAGAGTTTGGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR TCA 90 bp GTACAGGATAGCCAGCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCATTTAGCTGGCTGTCAAGCTCCTTC +
Preference number: 1 (lower is better)
Translates to: VQDSQREKALLRSRI*MYSRGSFSWLSSSF
Trigger: GAAGGAGCTTGACAGCCAGCTAAATGAACCCCGTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGCTGGCTATCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
3UTR GCA 90 bp AGAGGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGGGCAGCAGAAGCATTTGGATCTGTC +
Preference number: 1 (lower is better)
Translates to: RGESPKGEYVRLLMC*WRTACWAAEAFGSV
Trigger: GACAGATCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR GCA 90 bp TCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTaGTCAGCCTTAAATAAGCAAAGGGCCTCTAAGTGCTTGTCAGAT +
Preference number: 1 (lower is better)
Translates to: SEAKCRMMSLWQRFQ*SALNKQRASKCLSD
Trigger: ATCTGACAAGCACTTAGAGGCCCTTTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGCGG +
Preference number: 1 (lower is better)
Translates to: ICSIRLHSEVTLMCN*SRSLPEQSTCCIWR
Trigger: CCGCCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 90 bp AGCTGTTCCAAATCCTGCACCAAGCCCAGTTCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAATACTATTCCCACTGGTATTTGTGCC +
Preference number: 1 (lower is better)
Translates to: SCSKSCTKPSSKSPR*WFTSKNTIPTGICA
Trigger: GGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CCA 90 bp GGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTGATGTGCTGCTaGAGAACAGCCTGCTGGGCAGCAGAAGCATTTGGATCTGTCAAA +
Preference number: 1 (lower is better)
Translates to: GESPKGEYVRLLMCC*RTACWAAEAFGSVK
Trigger: TTTGACAGATCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CCA 90 bp AGCAAATACCAAAGATGGATAGCCAGGGAGCGTTTCCAATCCAACTaGGAGCACACGTTTATTTGCTTCTTTTCTGAGAGCTGCCACACC +
Preference number: 1 (lower is better)
Translates to: SKYQRWIARERFQSN*EHTFICFFSESCHT
Trigger: GGTGTGGCAGCTCTCAGAAAAGAAGCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAAGGGCCTCT +
Preference number: 1 (lower is better)
Translates to: SLMMASEAKCRMMSL*QRFQCSALNKQRAS
Trigger: AGAGGCCCTTTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 90 bp TGTAACACTGAATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCT +
Preference number: 1 (lower is better)
Translates to: CNTESALSDCTVKSL*CVTAPGHYLSNPPA
Trigger: AGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGATTCAGTGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 90 bp AGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTaGTTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAA +
Preference number: 1 (lower is better)
Translates to: RCLQDLTPSLALVST*LPMFVLFKVPRVIK
Trigger: TTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR GCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTaGCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAG +
Preference number: 1 (lower is better)
Translates to: KTALKINPSVTGIHF*PKCVRKIPFCFLTQ
Trigger: CTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR GCA 90 bp TCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTaGACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGT +
Preference number: 1 (lower is better)
Translates to: SPVKRQMPARPHALP*TCFNVIANVCTLQS
Trigger: ACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR GCA 90 bp CAGCAAGAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTaGAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGC +
Preference number: 1 (lower is better)
Translates to: QQENSLNLSSKKTDA*KTSRPPLHLFQRDC
Trigger: GCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTCTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR CCA 90 bp GACCAAGGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATaGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAATCC +
Preference number: 1 (lower is better)
Translates to: DQGFLHIVVAKVWCS*NSKGRNKNSPEDQS
Trigger: GGATTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCCTTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CCA 90 bp GTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAAAGGTATaGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAA +
Preference number: 1 (lower is better)
Translates to: VTCDQGFLHIVVAKV*CSWNSKGRNKNSPE
Trigger: TTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CCA 90 bp TGTTCCAAATCCTGCACCAAGCCCAGTTCCAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACTATTCCCACTGGTATTTGTGCCAAA +
Preference number: 1 (lower is better)
Translates to: CSKSCTKPSSKSPRC*FTSKNTIPTGICAK
Trigger: TTTGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCTTGGTGCAGGATTTGGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CCA 90 bp AGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTaGTTCTTTGGGGGATTCTGCCAAAGGAGCTTTATTGACCATTTT +
Preference number: 1 (lower is better)
Translates to: RVTRSRMARDGKRIP*FFGGFCQRSFIDHF
Trigger: AAAATGGTCAATAAAGCTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR TCA 90 bp AGGCCCAGGCTGAGGTGGTGGCTCCGGAGCCCCATGGCCCTGGCACTGCAAGAGGCAGGTCTCTGGATGTaGGGCCTCCTGGCCAGACCT +
Preference number: 2 (lower is better)
Translates to: RPRLRWWLRSPMALALQEAGLWM*GLLARP
Trigger: AGGTCTGGCCAGGAGGCCTCACATCCAGAGACCTGC...CTCTTGCAGTGCCAGGGCCATGGGGCTCCGGAGCCACCACCTCAGCCTGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR-3UTR CCA 90 bp GAGAACAGGAATAGTAGCACCACCAGGAGAGGCCAGGGCTGGTGTACTGAGCTTAGGCCCAGGCTGAGGTaGTGGCTCCGGAGCCCCATG +
Preference number: 2 (lower is better)
Translates to: ENRNSSTTRRGQGWCTELRPRLR*WLRSPM
Trigger: CATGGGGCTCCGGAGCCACCACCTCAGCCTGGGCCT...AAGCTCAGTACACCAGCCCTGGCCTCTCCTGGTGGTGCTACTATTCCTGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR-3UTR CCA 90 bp CTACATGGAAAGGGATTTTGGGAGAACAGGAATAGTAGCACCACCAGGAGAGGCCCCAGGCTGAGGTGGTaGCTCCGGAGCCCCATGGCC +
Preference number: 2 (lower is better)
Translates to: LHGKGFWENRNSSTTRRGPRLRW*LRSPMA
Trigger: GGCCATGGGGCTCCGGAGCCACCACCTCAGCCTGGG...GCCTCTCCTGGTGGTGCTACTATTCCTGTTCTCCCAAAATCCCTTTCCATGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR CAA 90 bp TGTGGGGAGCCAAGAGGCGCAAAGGGACTCGCTGAGGGTCTGGTGTaGAGTCGGAGGTTCTATCAGGAGGATGATGCAGACTCAGCACCA +
Preference number: 2 (lower is better)
Translates to: CGEPRGAKGLAEGLV*SRRFYQEDDADSAP
Trigger: TGGTGCTGAGTCTGCATCATCCTCCTGATAGAACCTCCGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCGCCTCTTGGCTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 90 bp CAGAGCAAAGATGCGCAGTCTCTCATCCTGGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCACCAACTGCATGGTGAGCAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: QSKDAQSLILDEGVC*ELMPVHQLHGEQLP
Trigger: CGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTTTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR TCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGAGCAGCTCCCGGACTaGCTGGCTACCCACAAACTG +
Preference number: 2 (lower is better)
Translates to: DPGVAILPEIALTPAISCEQLPD*LATHKL
Trigger: CAGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp CACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGGGAGCCCCATGGCCCTaGCACTGCAAGAGCGGGGGC +
Preference number: 2 (lower is better)
Translates to: HSPNRELVLRTGTEEKHKGAPWP*HCKSGG
Trigger: GCCCCCGCTCTTGCAGTGCCAGGGCCATGGGGCTCC...CTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR-3UTR TCA 90 bp TCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGAGAGCAGAAGGCCCAGGCTaGGGTGGTGGCTCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: SPNRELVLRTGTEEKHKRAEGPG*GGGSGA
Trigger: GGCTCCGGAGCCACCACCTCAGCCTGGGCCTTCTGC...TCTCTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR-3UTR TCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGC +
Preference number: 2 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGESAWS*CQSTNC
Trigger: GCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGACTGTGATGCAAAGTaGCTGGGGCTCACAGGCTCC +
Preference number: 2 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGDCDAK*LGLTGS
Trigger: GGAGCCTGTGAGCCCCAGGCACTTTGCATCACAGTC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCA +
Preference number: 2 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVRMMSL*QRFQCS
Trigger: TGAGCACTGGAACCGCTGCCACAAGCTCATCATCCG...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
3UTR-3UTR CCA 90 bp GTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGC +
Preference number: 2 (lower is better)
Translates to: VDPFGRYTELLGKESLFSGVSNS*QCRVSS
Trigger: GCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCC...GCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 90 bp AGGGCCTCTAAGTGCTTGTCAGATTCCATGTGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTA +
Preference number: 2 (lower is better)
Translates to: RASKCLSDSMCARTA*ASWIHLAGTRSFWV
Trigger: TACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACTTAGAGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATGTAGCAAAGGCCCTCTaGCTGCCCCTAACGCCCAAC +
Preference number: 2 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNVAKAL*LPLTPN
Trigger: GTTGGGCGTTAGGGGCAGGCAGAGGGCCTTTGCTAC...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR GCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTTCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGA +
Preference number: 2 (lower is better)
Translates to: RQSLSKTENQGPNQTLGASNSWQ*RVSSSR
Trigger: TCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGA...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGGAAGCTGGTTGGCATaGAGGGTCACAAGATCCAGA +
Preference number: 2 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGGSWLA*RVTRSR
Trigger: TCTGGATCTTGTGACCCTCCATGCCAACCAGCTTCC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGGCAGGAGGACAAAGATaGCCCACTCCCAGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRAGGQR*PTPRAP
Trigger: AGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGC...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 90 bp TCAGATTCCATGTGTGCTCGCACAGCTTTGGCCTCGTGGATCCATTaGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCC +
Preference number: 2 (lower is better)
Translates to: SDSMCARTALASWIH*AGTRSFWVRKVSLA
Trigger: GGCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 90 bp CGGTTCCAGTGCTCAGCCTTAAATAAGCAAAGGGCCTCTAAGTGCTaGTCAGATTCCATGTGTGCTCGCACAGCTTTGGCCTCGTGGATC +
Preference number: 2 (lower is better)
Translates to: RFQCSALNKQRASKC*SDSMCARTALASWI
Trigger: GATCCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACTTAGAGGCCCTTTGCTTATTTAAGGCTGAGCACTGGAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR TCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAGATCAATCCCTCCGTaGCAGGCATTCACTTCTGCC +
Preference number: 2 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGRSIPP*QAFTSA
Trigger: GGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR TCA 90 bp CTTTGGCCGGACTCTAGTGGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTCTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LWPDSSGRAGCQFIMSRCLLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...ACACCTACTCATTATAAACTGACACCCCGCCCTGCCACTAGAGTCCGGCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR TCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTACTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGG +
Preference number: 2 (lower is better)
Translates to: RWRVGNALELTWDEQGGLLRVWC*VGGSIR
Trigger: CCTGATAGAACCTCCGACTCAACACCAGACCCTCAG...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAACAAGTGGAGGATGCTaGTTCTGGCAGCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSTSGGC*FWQQGG
Trigger: CCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR-3UTR GCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGTCAGATTCCATGTGTaGTCGCACAGCTTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSVRFHV*SHSFGL
Trigger: GAGGCCAAAGCTGTGCGAGCACACATGGAATCTGAC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTACTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTC +
Preference number: 2 (lower is better)
Translates to: RWRVGNALELTWDEQGGLLDEGV*LELMPV
Trigger: GACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAG...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCACAGGGAACCTCTGTGTaGTGTGAATGGGCATGTGAC +
Preference number: 2 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVAQGTSV*CEWACD
Trigger: GTCACATGCCCATTCACACCACACAGAGGTTCCCTG...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTGGAAGCTGGTTGGCATaGAGGGTCACAAGATCCAGA +
Preference number: 2 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAGSWLA*RVTRSR
Trigger: TCTGGATCTTGTGACCCTCCATGCCAACCAGCTTCC...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCAGTAGGGAAGCTGGTTaGCATGGAGGGTCACAAGAT +
Preference number: 2 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSSREAG*HGGSQD
Trigger: ATCTTGTGACCCTCCATGCCAACCAGCTTCCCTACT...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTCGCAGTCTCTCATCCTaGATGAAGGAGTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: RQSLSKTENQGPNQTLGARSLSS*MKESAW
Trigger: CCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCG...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 90 bp TTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATGCTTaGGAGCTAACATGGGATGAACAGGGAGGGTTACCCAACCTGCCA +
Preference number: 2 (lower is better)
Translates to: FVFASGRGRWRVGNA*ELTWDEQGGLPNLP
Trigger: TGGCAGGTTGGGTAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CAA 90 bp ACGCACTTCAGCACCCCTCTCCTCCACACTCCCCAAATAGAGAGCTaGTTCTCAGAACAGGTACTGAGGAGAAACACAAGAGAGACTACA +
Preference number: 2 (lower is better)
Translates to: THFSTPLLHTPQIES*FSEQVLRRNTRETT
Trigger: TGTAGTCTCTCTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGTGTGGAGGAGAGGGGTGCTGAAGTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR-3UTR TCA 90 bp ACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGACCAGGGCTGGTGTACTaGGCTTCATACCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: TPQIESLFSEQVLRRNTRPGLVY*ASYLQG
Trigger: TCCCTGCAGGTATGAAGCTCAGTACACCAGCCCTGG...TCTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR-3UTR TCA 90 bp AGAGCAGGCCTCACTGATCCTTTTGCCTGTGAGGTAGCTGAATACAGCCTCCACCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: RAGLTDPFACEVAEYSLHLRSRI*MYSRGS
Trigger: TGAACCCCGTGAATACATTCAAATTCTGGAGCGAAG...GTGGAGGCTGTATTCAGCTACCTCACAGGCAAAAGGATCAGTGAGGCCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529063.1
3UTR-3UTR TCA 90 bp GCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGATGTTTCCCACCAACTGCATGGTaGGCAGCTCCCGGACTGACT +
Preference number: 2 (lower is better)
Translates to: AEHFNDSNIVQVNKPRCFPPTAW*AAPGLT
Trigger: AGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGG...GAAACATCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR TCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTTCGAAGTGGTGTCTGTaGGTTTTGCTCCTCCGCTAT +
Preference number: 2 (lower is better)
Translates to: RQSLSKTENQGPNQTLGASKWCL*VLLLRY
Trigger: ATAGCGGAGGAGCAAAACTCACAGACACCACTTCGA...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR TCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTACCTTCACACTGCGCTaGGAGATGGGTGTAGTTAAG +
Preference number: 2 (lower is better)
Translates to: RQSLSKTENQGPNQTLGATFTLR*EMGVVK
Trigger: CTTAACTACACCCATCTCTCAGCGCAGTGTGAAGGT...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp GGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCCCTCCCACTGGTATTTGTaGCAAAACCTGAGAACTTTT +
Preference number: 2 (lower is better)
Translates to: GCRSIKSRGPKGSCTKRPSHWYL*QNLRTF
Trigger: AAAAGTTCTCAGGTTTTGGCACAAATACCAGTGGGA...GGGCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR GCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGGGTGTCTGTGAGTTTTaGTCCTCCGCTATCACACAG +
Preference number: 2 (lower is better)
Translates to: KTALKINPSVTGIHFCPKGVCEF*SSAITQ
Trigger: CTGTGTGATAGCGGAGGAGCAAAACTCACAGACACC...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCA +
Preference number: 2 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLKALNK*RMLLLA
Trigger: TGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCA +
Preference number: 2 (lower is better)
Translates to: GVAILPEIALTPAISCHYKALNK*RMLLLA
Trigger: TGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAAGTAGGGAAGCTGGTTaGCATGGAGGGTCACAAGAT +
Preference number: 2 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVASREAG*HGGSQD
Trigger: ATCTTGTGACCCTCCATGCCAACCAGCTTCCCTACT...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGCTTTGGAGCTAACATaGGATGAACAGGGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSALELT*DEQGGL
Trigger: TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGCTTTGGAGCTAACATaGGATGAACAGGGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAALELT*DEQGGL
Trigger: TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp TCCTTCTTCTTAGGGTCTGACATCGGATTCCGGAAGAGAGGAGAGTCTCCAAAATGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 2 (lower is better)
Translates to: SFFLGSDIGFRKRGESPKWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...TTTTGGAGACTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR CCA 90 bp TCTCACGTATGCCTGAGTTGTCAATGTGCAGGAGGACAAAGATGGCCCACTCCCCGTTTCCAATCCAACTaGGAGCACACGTTTATTTGC +
Preference number: 2 (lower is better)
Translates to: SHVCLSCQCAGGQRWPTPRFQSN*EHTFIC
Trigger: GCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACG...GGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAGGCATACGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTC +
Preference number: 2 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGSKYQR*IARERF
Trigger: GAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 90 bp TTCCGGAAGAGAGGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACAGCCTGCTGGGCAGCAGAAGCATTT +
Preference number: 2 (lower is better)
Translates to: FRKRGESPKGEYVRL*MCCWRTACWAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCCTCTCTTCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR GCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGATGGAGGGTGGGAAATaGTTTGGAGCTAACATGGGA +
Preference number: 2 (lower is better)
Translates to: KTALKINPSVTGIHFCPKMEGGK*FGANMG
Trigger: TCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCAT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR GCA 90 bp TCAATCTCTTCCTTCTTCTTAGGGTCTGACATCGGATTCCGGAAGAGAGGAGAGAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: SISSFFLGSDIGFRKRGERLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...CTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGAAGAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR GCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGCAGCGGTTCCAGTaGTCAGCCTTAAATAAGCAA +
Preference number: 2 (lower is better)
Translates to: AGTKTALKINPSVTGIHFWQRFQ*SALNKQ
Trigger: TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCA...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp TATATGGCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGATGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: YMAEHFNDSNIVQVNKPRCQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...TCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGCCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGTCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 2 (lower is better)
Translates to: KTALKINPSVTGIHFCPKSVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR-3UTR GCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTAGGCCAACCCTCCTTTaGCTCCAAAATTCAGTGTTA +
Preference number: 2 (lower is better)
Translates to: RQSLSKTENQGPNQTLGARPTLL*LQNSVL
Trigger: TAACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCT...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCATCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 2 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSSVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR-3UTR CCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATAATACCCTGGTTCTTTaGGGGATTCTGCCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNNTLVL*GILPKE
Trigger: CTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATT...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp CTTTGGCCGGACTCTAGTGGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 2 (lower is better)
Translates to: LWPDSSGRAGCQFIMSRCKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...ACACCTACTCATTATAAACTGACACCCCGCCCTGCCACTAGAGTCCGGCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCCAGATACGAAGGAAGTaGGGAGCAGGCATATCTGTC +
Preference number: 2 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGQIRRK*GAGISV
Trigger: GACAGATATGCCTGCTCCCCACTTCCTTCGTATCTG...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 90 bp CTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTaGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: LSSKKTDACKTSRPP*HLFQRDCQCLYSSK
Trigger: CTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTTACATTATCTTCATaGATAAAGACCCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGFTLSS*IKTQVW
Trigger: CCACACCTGGGTCTTTATGCATGAAGATAATGTAAA...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGAATGGAGGCTGTTGGTaGAAGCAAATACCAAAGATG +
Preference number: 2 (lower is better)
Translates to: KTALKINPSVTGIHFCPKNGGCW*KQIPKM
Trigger: CATCTTTGGTATTTGCTTCCACCAACAGCCTCCATT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR-3UTR GCA 90 bp TCCTTCTTCTTAGGGTCTGACATCGGATTCCGGAAGAGAGGAGAGTCTCCAAAATCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: SFFLGSDIGFRKRGESPKSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...TTTTGGAGACTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 2 (lower is better)
Translates to: LLGSRSPYATFSIKKSPESVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGTAGTAGCAAAGGTATaGTGTTCATGGAACTCTAAA +
Preference number: 2 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSVVAKV*CSWNSK
Trigger: TTTAGAGTTCCATGAACACCATACCTTTGCTACTAC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAGTAGTAGCAAAGGTATaGTGTTCATGGAACTCTAAA +
Preference number: 2 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGVVAKV*CSWNSK
Trigger: TTTAGAGTTCCATGAACACCATACCTTTGCTACTAC...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp CCAAACAAAGATGCCTGTCCAGCACCAAGAGCTGTTCCAAATCCTGCACCAAGCAAATACTATTCCCACTaGTATTTGTGCCAAAACCTG +
Preference number: 2 (lower is better)
Translates to: PNKDACPAPRAVPNPAPSKYYSH*YLCQNL
Trigger: CAGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...GCTTGGTGCAGGATTTGGAACAGCTCTTGGTGCTGGACAGGCATCTTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CAA 90 bp AACCTTTACATTATCTTCATGCATAAAGACCCAGGTGTGGCCATATaGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACCTG +
Preference number: 2 (lower is better)
Translates to: NLYIIFMHKDPGVAI*PEIALTPAISCHYL
Trigger: CAGGTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTCTTTATGCATGAAGATAATGTAAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CAA 90 bp AGTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTaGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: SKKTDACKTSRPPLH*FQRDCQCLYSSKFQ
Trigger: TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR-3UTR GCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR-3UTR CCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATTCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 2 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDSVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CCA 90 bp TATATGGCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGAAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCA +
Preference number: 2 (lower is better)
Translates to: YMAEHFNDSNIVQVNKPRKALNK*RMLLLA
Trigger: TGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT...TCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGCCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CCA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGGTAGTAGCAAAGGTATaGTGTTCATGGAACTCTAAA +
Preference number: 2 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRVVAKV*CSWNSK
Trigger: TTTAGAGTTCCATGAACACCATACCTTTGCTACTAC...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR TCA 90 bp TATATGGCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGATATTTGCTTCTTTTCTaGGAGCTGCCACACCGGTTT +
Preference number: 2 (lower is better)
Translates to: YMAEHFNDSNIVQVNKPRYLLLF*ELPHRF
Trigger: AAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATA...TCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGCCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR GCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATCCTCACGCCCTCCCTTaGACTTGTTTCAACGTGATT +
Preference number: 2 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNPHALP*TCFNVI
Trigger: AATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGG...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR-3UTR GCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGGCAGAATTTACTGTaGATGAACCCACATGAGCAA +
Preference number: 2 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTRQNLL*MNPHEQ
Trigger: TTGCTCATGTGGGTTCATGCACAGTAAATTCTGCCT...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR-3UTR TCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAGTGCATGAACCCACATaGGCAAATCTTAAGTTAATC +
Preference number: 2 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTVHEPT*ANLKLI
Trigger: GATTAACTTAAGATTTGCTCATGTGGGTTCATGCAC...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR-3UTR TCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATGTGCATGAACCCACATaGGCAAATCTTAAGTTAATC +
Preference number: 2 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNVHEPT*ANLKLI
Trigger: GATTAACTTAAGATTTGCTCATGTGGGTTCATGCAC...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR-3UTR TCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATAGAATTTACTGTGCATaGACCCACATGAGCAAATCT +
Preference number: 2 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNRIYCA*THMSKS
Trigger: AGATTTGCTCATGTGGGTTCATGCACAGTAAATTCT...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR CCA 72 bp GGCTGCGCAGTTCGTCCATGGCATAGTCCTCAGGCATaGGAAGCCGGCCAATGTGGGGAGCCAAGAGGCGCA +
Preference number: 3 (lower is better)
Translates to: GCAVRPWHSPQA*EAGQCGEPRGA
Trigger: TGCGCCTCTTGGCTCCCCACATTGGCCGGCTTCCCATGCCTGAGGACTATGCCATGGACGAACTGCGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp GAGGATGATGCAGACTCAGCACCACGCGCAGCAGGTTaGCTACACGTTTGGCCATGTCTGACTGAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: EDDADSAPRAAG*LHVWPCLTEPG
Trigger: GCCTGGCTCAGTCAGACATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGGTGCTGAGTCTGCATCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 72 bp CTGCTTGGAGCTGATGCCAGTCCACCAACTGCATGGTaGGCAGCTCCCGGACTGACTGGCTACCCACAAACT +
Preference number: 3 (lower is better)
Translates to: LLGADASPPTAW*AAPGLTGYPQT
Trigger: AGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 72 bp GGGTCTGGTGTTGAGTCGGAGGTTCTATCAGGAGGATaGTGCAGACTCAGCACCACGCGCAGCAGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: GSGVESEVLSGG*CRLSTTRSRLA
Trigger: AGCCAACCTGCTGCGCGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAACCTCCGACTCAACACCAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 72 bp CCAATGTGGGGAGCCAAGAGGCGCAAAGGGACTCGCTaGGGGTCTGGTGTTGAGTCGGAGGTTCTATCAGGA +
Preference number: 3 (lower is better)
Translates to: PMWGAKRRKGTR*GSGVESEVLSG
Trigger: TCCTGATAGAACCTCCGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCGCCTCTTGGCTCCCCACATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp CCCAGAGCCCCTCACTTTCAAGCTGGCCAGCGTAACTaGCCTGTAGCACACCTTCACACTGCGCTGAGAGAT +
Preference number: 3 (lower is better)
Translates to: PRAPHFQAGQRN*PVAHLHTALRD
Trigger: ATCTCTCAGCGCAGTGTGAAGGTGTGCTACAGGCCAGTTACGCTGGCCAGCTTGAAAGTGAGGGGCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CAA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTTGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGC +
Preference number: 3 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVCRMMS*WQRFQC
Trigger: GCACTGGAACCGCTGCCACAAGCTCATCATCCGACA...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
3UTR GCA 72 bp TTAGCCCAAGATTCAGGGGTCTCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGAACAGCCTTCTCACGT +
Preference number: 3 (lower is better)
Translates to: LAQDSGVSNSWQ*RVSSSRTAFSR
Trigger: ACGTGAGAAGGCTGTTCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCCTGAATCTTGGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp GTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGCTCTCGAACAGCCTTC +
Preference number: 3 (lower is better)
Translates to: VSLAQDSGVSNS*QCRVSSSRTAF
Trigger: GAAGGCTGTTCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 72 bp AGTCTCTCATCCTGGATGAAGGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGCATGGTGAGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SLSSWMKESAWS*CQSTNCMVSSS
Trigger: GGAGCTGCTCACCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 72 bp CAAGAGGCGCAAAGGGACTCGCTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGGAGGATGATGCAGACT +
Preference number: 3 (lower is better)
Translates to: QEAQRDSLRVWC*VGGSIRRMMQT
Trigger: AGTCTGCATCATCCTCCTGATAGAACCTCCGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCGCCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 72 bp CAAGCCCAGATGTTTCCCAATCCTGAATTAGGCTGCTaGGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCT +
Preference number: 3 (lower is better)
Translates to: QAQMFPNPELGC*ALEVPGLPRTP
Trigger: AGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATCTGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp GTATGCCTGAGTTGTCAATGTGCAGGAGGACAAAGATaGCCCACTCCCAGAGCCCCTCACTTTCAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: VCLSCQCAGGQR*PTPRAPHFQAG
Trigger: GCCAGCTTGAAAGTGAGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAGGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 72 bp CCAACAGAGCAAAGATGCGCAGTCTCTCATCCTGGATaGAGGAGTCTGCTTGGAGCTGATGCCAGTCCACCA +
Preference number: 3 (lower is better)
Translates to: PTEQRCAVSHPG*RSLLGADASPP
Trigger: TGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp TCAGATTCCATGTGTGCTCGCACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACACGGAGCTTCTGGGTA +
Preference number: 3 (lower is better)
Translates to: SDSMCARTALAS*IHLAGTRSFWV
Trigger: TACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp AGTGCTTGTCAGATTCCATGTGTGCTCGCACAGCTTTaGCCTCGTGGATCCATTTGGCAGGTACACGGAGCT +
Preference number: 3 (lower is better)
Translates to: SACQIPCVLAQL*PRGSIWQVHGA
Trigger: AGCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CAA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGCCAGGTGTGGCCATATaGCCTGAGATAGCCCTAACA +
Preference number: 3 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGPGVAI*PEIALT
Trigger: TGTTAGGGCTATCTCAGGCAATATGGCCACACCTGG...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR GCA 72 bp AAAGATGCGCAGTCTCTCATCCTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTCCACCAACTGCATGGT +
Preference number: 3 (lower is better)
Translates to: KDAQSLILDEGV*LELMPVHQLHG
Trigger: ACCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 72 bp AAACAAGCCCAGATGTTTCCCAATCCTGAATTAGGCTaGTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACC +
Preference number: 3 (lower is better)
Translates to: KQAQMFPNPELG*CALEVPGLPRT
Trigger: GGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATCTGGGCTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp GCCTCGTGGATCCATTTGGCAGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGG +
Preference number: 3 (lower is better)
Translates to: ASWIHLAGTRSF*VRKVSLAQDSG
Trigger: CCCTGAATCTTGGGCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CAA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGACCAGGTGTGGCCATATaGCCTGAGATAGCCCTAACA +
Preference number: 3 (lower is better)
Translates to: IKKSPEQVEDAASGSREGPGVAI*PEIALT
Trigger: TGTTAGGGCTATCTCAGGCAATATGGCCACACCTGG...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CAA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGACAGGCCAACCCTCCTTaGCCTCCAAAATTCAGTGTT +
Preference number: 3 (lower is better)
Translates to: IKKSPEQVEDAASGSREGQANPP*PPKFSV
Trigger: AACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCTG...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CAA 90 bp CTGGGCCAGAGAGCAGGCCTCACTGATCCTTTTGCCTGTGAGGTAGCTGAATACTCTTCGCTCCAGAATTaGAATGTATTCACGGGGTTC +
Preference number: 3 (lower is better)
Translates to: LGQRAGLTDPFACEVAEYSSLQN*NVFTGF
Trigger: GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGA...GTATTCAGCTACCTCACAGGCAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529063.1
3UTR TCA 72 bp CTCTGCAGGCAAATCCAGACAGAGTCTCAGCAAGACTaGAAACCAGGGACCAAACCAAACTCTGGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: LCRQIQTESQQD*KPGTKPNSGSF
Trigger: GAAGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCTGGATTTGCCTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR TCA 72 bp GAGGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAGCCTGCTGGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: EESLQKVSMLDY*CAAGEQPAGQQ
Trigger: CTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CCA 72 bp ATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: MLRSVLRKALNK*RMLLLAAGREG
Trigger: ACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR CCA 72 bp GGTAGATGGAGGGTGGGAAATGCTTTGGAGCTAACATaGGATGAACAGGGAGGGTTACCCAACCTGCCATTT +
Preference number: 3 (lower is better)
Translates to: GRWRVGNALELT*DEQGGLPNLPF
Trigger: AAATGGCAGGTTGGGTAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CCA 72 bp AAGGCTCCTGTACCAAGAGGCCCTCCAATCTTAGGTTaGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCA +
Preference number: 3 (lower is better)
Translates to: KAPVPRGPPILG*LFPNKDACPAP
Trigger: TGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGGCCTCTTGGTACAGGAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR CAA 90 bp GTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCGAATACCCTGGTTCTTaGGGGGATTCTGCCAAAGGA +
Preference number: 3 (lower is better)
Translates to: VDPFGRYTELLGKESLFSEYPGS*GDSAKG
Trigger: TCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTC...GCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGC +
Preference number: 3 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRCRMMS*WQRFQC
Trigger: GCACTGGAACCGCTGCCACAAGCTCATCATCCGACA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CAA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGTGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTG +
Preference number: 3 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWCARTA*ASWIHL
Trigger: CAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACA...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp TTTGGGTTAAGGAGACTTCCTCTTCAATCTGAGGTGTaGCAGTACAGGATAGCCAGCGGGAGAAAGCTCTTC +
Preference number: 3 (lower is better)
Translates to: FGLRRLPLQSEV*QYRIASGRKLF
Trigger: GAAGAGCTTTCTCCCGCTGGCTATCCTGTACTGCCACACCTCAGATTGAAGAGGAAGTCTCCTTAACCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529063.1
3UTR CCA 72 bp GAAATGGAGGCTGTTGGTGGAAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTCCAATCCAACTGGGAG +
Preference number: 3 (lower is better)
Translates to: EMEAVGGSKYQR*IARERFQSNWE
Trigger: CTCCCAGTTGGATTGGAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCTTCCACCAACAGCCTCCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR-3UTR CAA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGCAGAAAGATCCCATTTaGTTTCCTAACTCAGGCCAA +
Preference number: 3 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGQKDPI*FPNSGQ
Trigger: TTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTG...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CAA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCAGAAAGATCCCATTTaGTTTCCTAACTCAGGCCAA +
Preference number: 3 (lower is better)
Translates to: DPGVAILPEIALTPAISCQKDPI*FPNSGQ
Trigger: TTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CAA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCAC +
Preference number: 3 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSDEGVC*ELMPVH
Trigger: GTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR TCA 72 bp AGCCAGCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCATTTAGCTGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: SQREKALLRSRI*MYSRGSFSWLS
Trigger: TGACAGCCAGCTAAATGAACCCCGTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
3UTR GCA 72 bp GAGCGTTTCCAATCCAACTGGGAGCACACGTTTATTTaGTTCTTTTCTGAGAGCTGCCACACCGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: ERFQSNWEHTFI*FFSESCHTGFP
Trigger: TGGAAAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 72 bp CAGTGCTCAGCCTTAAATAAGCAAAGGGCCTCTAAGTaGTTGTCAGATTCCATGTGTGCTCGCACAGCTTTG +
Preference number: 3 (lower is better)
Translates to: QCSALNKQRASK*LSDSMCARTAL
Trigger: CAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACTTAGAGGCCCTTTGCTTATTTAAGGCTGAGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 72 bp ATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAGCAATCCACCTGCTGT +
Preference number: 3 (lower is better)
Translates to: IRLHSEVTLMCN*SRSLPEQSTCC
Trigger: ACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CCA 72 bp ATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAA +
Preference number: 3 (lower is better)
Translates to: MASEAKCRMMSL*QRFQCSALNKQ
Trigger: TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
3UTR-3UTR CAA 90 bp TCCTTCTTCTTAGGGTCTGACATCGGATTCCGGAAGAGAGGAGAGTCTCCAAAACCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 3 (lower is better)
Translates to: SFFLGSDIGFRKRGESPKPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...TTTTGGAGACTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR GCA 72 bp ACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTaGCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCA +
Preference number: 3 (lower is better)
Translates to: TSRPPLHLFQRD*QCLYSSKFQGS
Trigger: TGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR GCA 72 bp AAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTaGACTTGTTTCAACGTGATTGCCAATGTTTGTACT +
Preference number: 3 (lower is better)
Translates to: KRQMPARPHALP*TCFNVIANVCT
Trigger: AGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR GCA 72 bp TATGTTAGACTATTGATGTGCTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTTGGATCTGTCAAAGCT +
Preference number: 3 (lower is better)
Translates to: YVRLLMCCWRTA*WAAEAFGSVKA
Trigger: AGCTTTGACAGATCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR GCA 72 bp TCTCCAAAAGGTGAGTATGTTAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGGGCAGCAGAAGCATTT +
Preference number: 3 (lower is better)
Translates to: SPKGEYVRLLMC*WRTACWAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CCA 72 bp CAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATaGAGGGTGGGAAATGCTTTGGAGCTAACATGGGAT +
Preference number: 3 (lower is better)
Translates to: QSWFVFASGRGR*RVGNALELTWD
Trigger: ATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CCA 72 bp TCCTGCACCAAGCCCAGTTCCAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACTATTCCCACTGGTATT +
Preference number: 3 (lower is better)
Translates to: SCTKPSSKSPRC*FTSKNTIPTGI
Trigger: AATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCTTGGTGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR-3UTR CAA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAACAGGCCAACCCTCCTTaGCCTCCAAAATTCAGTGTT +
Preference number: 3 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQQANPP*PPKFSV
Trigger: AACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCTG...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CAA 90 bp TCAATCTCTTCCTTCTTCTTAGGGTCTGACATCGGATTCCGGAAGAGAGGAGAGTATTCCCACTGGTATTaGTGCCAAAACCTGAGAACT +
Preference number: 3 (lower is better)
Translates to: SISSFFLGSDIGFRKRGEYSHWY*CQNLRT
Trigger: AGTTCTCAGGTTTTGGCACAAATACCAGTGGGAATA...CTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGAAGAGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR TCA 72 bp GAATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGTCATTACCTGAGCAAT +
Preference number: 3 (lower is better)
Translates to: ESALSDCTVKSL*CVTAPGHYLSN
Trigger: ATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR GCA 72 bp CTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTaGCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTC +
Preference number: 3 (lower is better)
Translates to: LKINPSVTGIHF*PKCVRKIPFCF
Trigger: GAAACAAAATGGGATCTTTCTGACACACTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR TCA 72 bp TTTGTTGGTTTCAATCTCTTCCTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAGAGGAGAGTCTCCAAA +
Preference number: 3 (lower is better)
Translates to: FVGFNLFLLLRV*HRIPEERRVSK
Trigger: TTTGGAGACTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGAAGAGATTGAAACCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CCA 72 bp AGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTaGTTCTTTGGGGGATTCTGCCAAAGGAGCTTTATT +
Preference number: 3 (lower is better)
Translates to: RSRMARDGKRIP*FFGGFCQRSFI
Trigger: AATAAAGCTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
3UTR CCA 72 bp GACCAAGGGTTCCTGCACATAGTAGTAGCAAAGGTATaGTGTTCATGGAACTCTAAAGGCAGGAACAAAAAC +
Preference number: 3 (lower is better)
Translates to: DQGFLHIVVAKV*CSWNSKGRNKN
Trigger: GTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCCTTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACCGCCCTCCCTTGCACTaGTTTCAACGTGATTGCCAA +
Preference number: 3 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNRPPLH*FQRDCQ
Trigger: TTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCG...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATACCTCACGCCCTCCCTaGCACTTGTTTCAACGTGAT +
Preference number: 3 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNTSRPP*HLFQRD
Trigger: ATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGT...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR GCA 72 bp AATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTaGAAGACCTCACGCCCTCCCTTGCACTTGTTTCAA +
Preference number: 3 (lower is better)
Translates to: NSLNLSSKKTDA*KTSRPPLHLFQ
Trigger: TTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR CCA 72 bp TTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATaGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAA +
Preference number: 3 (lower is better)
Translates to: FLHIVVAKVWCS*NSKGRNKNSPE
Trigger: TTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CCA 72 bp ACCAATTACTTAAGAGACGGATCCCTCTTCCTTCTGTaGATAGTTCATCTGTTAAGGATCCATTATCACCTG +
Preference number: 3 (lower is better)
Translates to: TNYLRDGSLFLL*IVHLLRIHYHL
Trigger: CAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAGAGGGATCCGTCTCTTAAGTAATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGTGGCTCCGGAGCCCCATGGCCCTGGCACTGCAAGAGCGGGGGCAGGTCTCTGCCTGAATTAGGCTGCTaGGCTCTGGAGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGSGAPWPWHCKSGGRSLPELGC*ALEVPG
Trigger: ACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGG...CAGAGACCTGCCCCCGCTCTTGCAGTGCCAGGGCCATGGGGCTCCGGAGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp TGGCTCCGGAGCCCCATGGCCCTGGCACTGCAAGAGCGGGGGCAGGTCTCTGGAGGTGTGGACAGTACCTaGCTGAGCCAGGCGATCTTT +
Preference number: 4 (lower is better)
Translates to: WLRSPMALALQERGQVSGGVDST*LSQAIF
Trigger: AAAGATCGCCTGGCTCAGTCAGGTACTGTCCACACC...TCCAGAGACCTGCCCCCGCTCTTGCAGTGCCAGGGCCATGGGGCTCCGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp CCCTGGCACTGCAAGAGCGGGGGCAGGTCTCTGGATGTGAGGCCTCCTGGCCAGCCAGGGCTGGTGTACTaGGCTTCATACCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PWHCKSGGRSLDVRPPGQPGLVY*ASYLQG
Trigger: TCCCTGCAGGTATGAAGCTCAGTACACCAGCCCTGG...CTGGCCAGGAGGCCTCACATCCAGAGACCTGCCCCCGCTCTTGCAGTGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp TGGCTCCGGAGCCCCATGGCCCTGGCACTGCAAGAGCGGGGGCAGGTCTCTGGATGGACAGTACCTGACTaGGCCAGGCGATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: WLRSPMALALQERGQVSGWTVPD*ARRSLA
Trigger: TGCTAAAGATCGCCTGGCTCAGTCAGGTACTGTCCA...TCCAGAGACCTGCCCCCGCTCTTGCAGTGCCAGGGCCATGGGGCTCCGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR GCA 90 bp TGGCTCCGGAGCCCCATGGCCCTGGCACTGCAAGAGCGGGGGCAGGTCTCTGGAAATCCTGAATTAGGCTaGTGCGCTCTGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: WLRSPMALALQERGQVSGNPELG*CALEVP
Trigger: TGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATT...TCCAGAGACCTGCCCCCGCTCTTGCAGTGCCAGGGCCATGGGGCTCCGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR CCA 90 bp GCCCTGGCACTGCAAGAGCGGGGGCAGGTCTCTGGATGTGAGGCCTCCTGGCCAAGGAGAGGCCAGGGCTaGTGTACTGAGCTTCATACC +
Preference number: 4 (lower is better)
Translates to: ALALQERGQVSGCEASWPRRGQG*CTELHT
Trigger: GGTATGAAGCTCAGTACACCAGCCCTGGCCTCTCCT...TGGCCAGGAGGCCTCACATCCAGAGACCTGCCCCCGCTCTTGCAGTGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATCGCCGTCCGCGAATTaGTGGACGCGGCCGCCACTC +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRSPSAN*WTRPPL
Trigger: GAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR GCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGCGTCAGAGGCTCGTTaGGGACGCTCCGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVASEAR*GRSALA
Trigger: GGCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACGC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCCCGTCCGCGAATTGGTaGACGCGGCCGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLPSANW*TRPPLW
Trigger: CCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGG...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR GCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGTGTCAGGAGTCCCCTaGTGCCACCCGCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWVSGVP*CHPPLT
Trigger: TGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGACAC...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCACTGCAAGAGCGGGGGCAGGTCTCTGGATGTGAGGCCTCCTGGCCAGACCTACCTGAGCAATCCACCTaGTGTATATGGCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: ALQERGQVSGCEASWPDLPEQST*CIWRSI
Trigger: AATGCTCCGCCATATACAGCAGGTGGATTGCTCAGG...TAGGTCTGGCCAGGAGGCCTCACATCCAGAGACCTGCCCCCGCTCTTGCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGCAGACACAGGTTCCTaGTCCTCAGGCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHADTGS*SSGMLS
Trigger: AGAGAGCATGCCTGAGGATCAGGAACCTGTGTCTGC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATCAGGAGTCCCCTGCTaGCACCCGCCGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGSGVPC*HPPLTE
Trigger: CTCTGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCAAAGCCACCTGTaGCACCCCCAAAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRCQSHL*HPQRVF
Trigger: GAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRSNSWQ*RVSSSR
Trigger: TCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GAGAACAGGAATAGTAGCACCACCAGGAGAGGCCAGGGCTGGTGTACTGAGCTTGCTGCGCTCTGGAGGTaGCAGGTCTTCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: ENRNSSTTRRGQGWCTELAALWR*QVFQEP
Trigger: GGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC...AAGCTCAGTACACCAGCCCTGGCCTCTCCTGGTGGTGCTACTATTCCTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATCCCACCTGGTTCTGTaGGCCCTTCCTGTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRSHLVL*ALPVSL
Trigger: CAGGCTAACAGGAAGGGCCCACAGAACCAGGTGGGA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHRMMSL*QRFQCS
Trigger: TGAGCACTGGAACCGCTGCCACAAGCTCATCATCCG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AGTCGGAGGTTCTATCAGGAGGATGATGCAGACTCAGCACCACGCGCAGCAGGTGCAGACACAGGTTCCTaGTCCTCAGGCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SRRFYQEDDADSAPRAAGADTGS*SSGMLS
Trigger: AGAGAGCATGCCTGAGGATCAGGAACCTGTGTCTGC...ACCTGCTGCGCGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAACCTCCGACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGTTCGTCCATGGCATAGTCCTCAGGCATGGGAAGCCGGCCAATGTGGGGAGCGAAATGAGCGTCCCATaGATAGGGCCATGTCCATCA +
Preference number: 4 (lower is better)
Translates to: QFVHGIVLRHGKPANVGSEMSVP*IGPCPS
Trigger: TGATGGACATGGCCCTATTCATGGGACGCTCATTTC...GCTCCCCACATTGGCCGGCTTCCCATGCCTGAGGACTATGCCATGGACGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCCTCTTCAATCTGAGGTGTGGCAGTACAGGATAGCCAGCGGGAGAAAGCTCCCACCAACTGCATGGTaGGCAGCTCCCGGACTGACT +
Preference number: 4 (lower is better)
Translates to: LPLQSEVWQYRIASGRKLPPTAW*AAPGLT
Trigger: AGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGG...GAGCTTTCTCCCGCTGGCTATCCTGTACTGCCACACCTCAGATTGAAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR TCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCCCACCAACTGCATGGTaGGCAGCTCCCGGACTGACT +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLPPTAW*AAPGLT
Trigger: AGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGG...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGG +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRLRVWC*VGGSIR
Trigger: CCTGATAGAACCTCCGACTCAACACCAGACCCTCAG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp TGCCAGTCCACCAACTGCATGGTGAGCAGCTCCCGGACTGACTGGCTACCCACACAGACATGTCACATGTaGCCAAGGGTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: CQSTNCMVSSSRTDWLPTQTCHM*PRVPAH
Trigger: ATGTGCAGGAACCCTTGGTCACATGTGACATGTCTG...TGTGGGTAGCCAGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGTCAGGAGTCCCCTaGTGCCACCCGCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNVSGVP*CHPPLT
Trigger: TGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGACAC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAGCTGAAGAGTCCTGTTaGGCTGGAAGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRAEESC*AGSGWR
Trigger: TCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGC...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGGGACTAGGCCTAGTTaGCTACGTGTACCCACTGTT +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHGTRPS*LRVPTV
Trigger: AACAGTGGGTACACGTAGGCAACTAGGCCTAGTCCC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGCTGCGCTCTGGAGGTaGCAGGTCTTCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCAALWR*QVFQEP
Trigger: GGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGCTGCGCTCTGGAGGTaGCAGGTCTTCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLAALWR*QVFQEP
Trigger: GGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGTTCGTCCATGGCATAGTCCTCAGGCATGGGAAGCCGGCCAATGTGGGGAGCGCCCAACTCCATGCCTaGCTCAGTCATGGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QFVHGIVLRHGKPANVGSAQLHA*LSHGLF
Trigger: AAACAAACCATGACTGAGGCAGGCATGGAGTTGGGC...GCTCCCCACATTGGCCGGCTTCCCATGCCTGAGGACTATGCCATGGACGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGTAGCAAAGGCCCTCTaGCTGCCCCTAACGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGVAKAL*LPLTPN
Trigger: GTTGGGCGTTAGGGGCAGGCAGAGGGCCTTTGCTAC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGGGATGAGAAGAGACTaGTCCCTGTGCTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHGMRRD*SLCLQF
Trigger: GAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGTACCTGCTCCCACCTaGTTCTGTGGGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGVPAPT*FCGPFL
Trigger: CAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTAC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGTACCTGCTCCCACCTaGTTCTGTGGGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCVPAPT*FCGPFL
Trigger: CAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTAC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCAAAGCTACTGGGGCCTaGGGGGCTCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: VAVVVLNPGAPKAPVPRGKATGA*GAPKPK
Trigger: TTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTT...GCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTAAAGCTACTGGGGCCTaGGGGGCTCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVKATGA*GAPKPK
Trigger: TTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTT...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp TGCCAGTCCACCAACTGCATGGTGAGCAGCTCCCGGACTGACTGGCTACCCACACAGATACGAAGGAAGTaGGGAGCAGGCATATCTGTC +
Preference number: 4 (lower is better)
Translates to: CQSTNCMVSSSRTDWLPTQIRRK*GAGISV
Trigger: GACAGATATGCCTGCTCCCCACTTCCTTCGTATCTG...TGTGGGTAGCCAGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGCAGGAGGACAAAGATaGCCCACTCCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWAGGQR*PTPRAP
Trigger: AGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGC...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGGVSNS*QCRVSS
Trigger: GCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCC...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CAA 72 bp CCAAGAGGCGCAAAGGGACTCGCTGAGGGTCTGGTGTaGAGTCGGAGGTTCTATCAGGAGGATGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: PRGAKGLAEGLV*SRRFYQEDDAD
Trigger: GTCTGCATCATCCTCCTGATAGAACCTCCGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCGCCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGTTCGTCCATGGCATAGTCCTCAGGCATGGGAAGCCGGCCAATGTGGGGAGCACCATATGCAAAGCCTaGATTAGTGGTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QFVHGIVLRHGKPANVGSTICKA*ISGGGA
Trigger: AGCTCCTCCACCACTAATTCAGGCTTTGCATATGGT...GCTCCCCACATTGGCCGGCTTCCCATGCCTGAGGACTATGCCATGGACGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHLLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGAGAAGAGCAAGACGATaGTCCCCTGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWRRARR*SPDCWA
Trigger: GGCCCAGCAGTCAGGGGATCATCGTCTTGCTCTTCT...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
CDS-3UTR TCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCAGAAGAGCAAGACGATaGTCCCCTGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLRRARR*SPDCWA
Trigger: GGCCCAGCAGTCAGGGGATCATCGTCTTGCTCTTCT...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGAGCAGCTCCCGGACTaGCTGGCTACCCACAAACTG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAEQLPD*LATHKL
Trigger: CAGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AGTCGGAGGTTCTATCAGGAGGATGATGCAGACTCAGCACCACGCGCAGCAGGTGTTCTATCAGGAGGATaGTGCAGACTCAGCACCACG +
Preference number: 4 (lower is better)
Translates to: SRRFYQEDDADSAPRAAGVLSGG*CRLSTT
Trigger: CGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAAC...ACCTGCTGCGCGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAACCTCCGACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGCCAGTTGTGGTACCTaGTCCCACCTGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLASCGT*SHLVLW
Trigger: CCACAGAACCAGGTGGGAGCAGGTACCACAACTGGC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAATCCCATGGTGTTGGTaGTTGGCTGTCCTATGGTGC +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRIPWCW*LAVLWC
Trigger: GCACCATAGGACAGCCAAGCACCAACACCATGGGAT...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TGCCAGTCCACCAACTGCATGGTGAGCAGCTCCCGGACTGACTGGCTACCCACATGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: CQSTNCMVSSSRTDWLPTCSCSK*CPSAGV
Trigger: AACACCAGCACTGGGACAGCATTTGGAACAGGAACA...TGTGGGTAGCCAGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGGGCGTAGTCTGGCTTaGAGGAGGCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGGRSLA*RRQRSS
Trigger: ACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCCTGAGCAATCCACCTaGTGTATATGGCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHPEQST*CIWRSI
Trigger: AATGCTCCGCCATATACAGCAGGTGGATTGCTCAGG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTCAGAGCGAGACTGACTaGTGGGCCAGAGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAQSETD*WAREQA
Trigger: GGCCTGCTCTCTGGCCCAGCAGTCAGTCTCGCTCTG...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGAAAGCGCGGTTCGGTaGGGAAGGGGAAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVESAVR*GRGSVR
Trigger: CCTGACACTTCCCCTTCCCCACCGAACCGCGCTTTC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCCGGAACCTCAGGGGCTaGGCTGGGCATTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSRNLRG*AGHCEH
Trigger: GTGTTCACAATGCCCAGCCCAGCCCCTGAGGTTCCG...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGACGGAACCTCAGGGGCTaGGCTGGGCATTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGRNLRG*AGHCEH
Trigger: GTGTTCACAATGCCCAGCCCAGCCCCTGAGGTTCCG...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCTTCAATCTGAGGTGTaGCAGTACAGGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHLQSEV*QYRIAS
Trigger: GCTGGCTATCCTGTACTGCCACACCTCAGATTGAAG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCCACGCGCAGCAGGTTaGCTACACGTTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCPRAAG*LHVWPC
Trigger: ACATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGGAAGCCGGCCAATGTaGGGAGCCAAGAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVGSRPM*GAKRRK
Trigger: TTTGCGCCTCTTGGCTCCCCACATTGGCCGGCTTCC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
3UTR CAA 72 bp GATGCGCAGTCTCTCATCCTGGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCACCAACTGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: DAQSLILDEGVC*ELMPVHQLHGE
Trigger: CTCACCATGCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHSSLFP*NCFQSS
Trigger: GGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCT...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGGAAGGCAGGCGACTaGAGCGTTGATCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAWKAGD*SVDPVP
Trigger: TGGCACTGGATCAACGCTTCAGTCGCCTGCCTTCCA...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGAAGGCAGGCGACTaGAGCGTTGATCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVWKAGD*SVDPVP
Trigger: TGGCACTGGATCAACGCTTCAGTCGCCTGCCTTCCA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACCAGATTGGGGACAATaGGAGGACACAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRPDWGQ*EDTVHP
Trigger: TGGATGAACTGTGTCCTCTCATTGTCCCCAATCTGG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCTGCATAGTCATGAATaGCAGCAACTCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHLHSHE*QQLPDW
Trigger: CCAATCTGGGAGTTGCTGTCATTCATGACTATGCAG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCAGAAGAGCAAGACGATaGTCCCCTGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSRRARR*SPDCWA
Trigger: GGCCCAGCAGTCAGGGGATCATCGTCTTGCTCTTCT...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324932.12
ENST00000359171.8
CDS-3UTR TCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGAGCAGCTCCCGGACTaGCTGGCTACCCACAAACTG +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLEQLPD*LATHKL
Trigger: CAGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATCCACCAACTGCATGGTaGGCAGCTCCCGGACTGACT +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHPPTAW*AAPGLT
Trigger: AGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGG...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACTCCAGGTCATTACCTaGGCAATCCACCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRLQVIT*AIHLLY
Trigger: ATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGCCAAAGCCACCTGTaGCACCCCCAAAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWACQSHL*HPQRVF
Trigger: GAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCA...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGCCAGTTGTGGTACCTaGTCCCACCTGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAASCGT*SHLVLW
Trigger: CCACAGAACCAGGTGGGAGCAGGTACCACAACTGGC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGCTGAAGAGTCCTGTTaGGCTGGAAGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLAEESC*AGSGWR
Trigger: TCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRRLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGGGCGTAGTCTGGCTTaGAGGAGGCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVGRSLA*RRQRSS
Trigger: ACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAACAACCCTCCCTAACTaGTCCACCTCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGTTLPN*STSGLW
Trigger: CCAGAGCCCAGAGGTGGAGCAGTTAGGGAGGGTTGT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFCQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCECQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAATGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQCQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWCQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSSNSWQ*RVSSSR
Trigger: TCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGA...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTGTCAGATTCCATGTGTaGTCGCACAGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVVRFHV*SHSFGL
Trigger: GAGGCCAAAGCTGTGCGAGCACACATGGAATCTGAC...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGCTGCGCTCTGGAGGTaGCAGGTCTTCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHAALWR*QVFQEP
Trigger: GGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAGCTGCGCTCTGGAGGTaGCAGGTCTTCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQAALWR*QVFQEP
Trigger: GGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAACAAGTGGAGGATGCTaGTTCTGGCAGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGTSGGC*FWQQGG
Trigger: CCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGGAAAGCGCGGTTCGGTaGGGAAGGGGAAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWESAVR*GRGSVR
Trigger: CCTGACACTTCCCCTTCCCCACCGAACCGCGCTTTC...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGAAAGCGCGGTTCGGTaGGGAAGGGGAAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNESAVR*GRGSVR
Trigger: CCTGACACTTCCCCTTCCCCACCGAACCGCGCTTTC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGAAAGCTACTGGGGCCTaGGGGGCTCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVKATGA*GAPKPK
Trigger: TTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGGCAGCAGAAGCATTTaGATCTGTCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHGSRSI*ICQSYW
Trigger: CCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGCGGAACCTCAGGGGCTaGGCTGGGCATTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKRNLRG*AGHCEH
Trigger: GTGTTCACAATGCCCAGCCCAGCCCCTGAGGTTCCG...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTTCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVSSSFR*PHRASH
Trigger: ATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGA...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTCGCAGTCTCTCATCCTaGATGAAGGAGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVRSLSS*MKESAW
Trigger: CCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCG...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGCTGGCCAGCGTAACTaGCCTGTAGCACACCTTCAC +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSAGQRN*PVAHLH
Trigger: GTGAAGGTGTGCTACAGGCCAGTTACGCTGGCCAGC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGCTGGCCAGCGTAACTaGCCTGTAGCACACCTTCAC +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVAGQRN*PVAHLH
Trigger: GTGAAGGTGTGCTACAGGCCAGTTACGCTGGCCAGC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCGCAGGAGGACAAAGATaGCCCACTCCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFAGGQR*PTPRAP
Trigger: AGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGC...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRGVSNS*QCRVSS
Trigger: GCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCC...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCACCACGCGCAGCAGGTTaGCTACACGTTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAPRAAG*LHVWPC
Trigger: ACATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGG...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGGGAAGCCGGCCAATGTaGGGAGCCAAGAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKGSRPM*GAKRRK
Trigger: TTTGCGCCTCTTGGCTCCCCACATTGGCCGGCTTCC...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAGGAAGCCGGCCAATGTaGGGAGCCAAGAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEGSRPM*GAKRRK
Trigger: TTTGCGCCTCTTGGCTCCCCACATTGGCCGGCTTCC...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTGCGCAGTTCGTCCATaGCATAGTCCTCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGCAVRP*HSPQAW
Trigger: CCATGCCTGAGGACTATGCCATGGACGAACTGCGCA...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACTCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHSVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGAGCGAGACTGACTGCTaGGCCAGAGAGCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ELLGKESLFSPRFRGLQQSETDC*AREQAS
Trigger: TGAGGCCTGCTCTCTGGCCCAGCAGTCAGTCTCGCT...CTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTTCCTTACCCAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 72 bp GCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATGCTTaGGAGCTAACATGGGATGAACAGGGAGGGTTACCC +
Preference number: 4 (lower is better)
Translates to: ASGRGRWRVGNA*ELTWDEQGGLP
Trigger: GGGTAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCTACCCCTTCCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CAA 72 bp CCTAACGCCCAACTCCATGCCTGCCTCAGTCATGGTTaGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PNAQLHACLSHG*FLLLEGVDGGW
Trigger: CCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAGGCATGGAGTTGGGCGTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CAA 72 bp ATGTGTGCTCGCACAGCTTTGGCCTCGTGGATCCATTaGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: MCARTALASWIH*AGTRSFWVRKV
Trigger: GACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
3UTR CAA 72 bp AAGTGCTTGTCAGATTCCATGTGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTGGCAGGTACACGGAGC +
Preference number: 4 (lower is better)
Translates to: KCLSDSMCARTA*ASWIHLAGTRS
Trigger: GCTCCGTGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp AGTCGGAGGTTCTATCAGGAGGATGATGCAGACTCAGCACCACGCGCAGCAGGTAGCTGGCTGGCTAAATaGACTGGTTCCAAACAATCC +
Preference number: 4 (lower is better)
Translates to: SRRFYQEDDADSAPRAAGSWLAK*TGSKQS
Trigger: GGATTGTTTGGAACCAGTTCATTTAGCCAGCCAGCT...ACCTGCTGCGCGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAACCTCCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp GGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGGGCAAGACCTCCAGGCTGTaGGGCTTGGGTTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: GRAGCQFIMSRCSKSLLGKTSRL*GLGYSK
Trigger: TTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTT...GCCCAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCCCGCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR TCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGAAGGCAGGCGACTaGAGCGTTGATCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEWKAGD*SVDPVP
Trigger: TGGCACTGGATCAACGCTTCAGTCGCCTGCCTTCCA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGGGCCAGAGAGCAGGCCTCACTGATCCTTTTGCCTGTGAGGTAGCTGAATACGAAATGAGCGTCCCATaGATAGGGCCATGTCCATCA +
Preference number: 4 (lower is better)
Translates to: LGQRAGLTDPFACEVAEYEMSVP*IGPCPS
Trigger: TGATGGACATGGCCCTATTCATGGGACGCTCATTTC...GTATTCAGCTACCTCACAGGCAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR TCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAACTTCCTCTTCAATCTaGGGTGTGGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRTSSSI*GVAVQD
Trigger: ATCCTGTACTGCCACACCTCAGATTGAAGAGGAAGT...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CCAGCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTGAATGTATTCACGGGGTTCAGAAGAGCAAGACGATaGTCCCCTGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PAGESSSSLQNLNVFTGFRRARR*SPDCWA
Trigger: GGCCCAGCAGTCAGGGGATCATCGTCTTGCTCTTCT...GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR TCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCGAGCAGCTCCCGGACTaGCTGGCTACCCACAAACTG +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAEQLPD*LATHKL
Trigger: CAGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTC...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGC +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHESAWS*CQSTNC
Trigger: GCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTC...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGC +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWESAWS*CQSTNC
Trigger: GCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTC...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCACTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWALRVWC*VGGSIR
Trigger: CCTGATAGAACCTCCGACTCAACACCAGACCCTCAG...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGGGCAACGCGTCTTTTaGAACCGAACTGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAGQRVF*NRTEGG
Trigger: TCCCCCTTCAGTTCGGTTTCAAAAGACGCGTTGCCC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR GCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACTGCCAAAGCCACCTGTaGCACCCCCAAAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNCQSHL*HPQRVF
Trigger: GAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCA...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGTTGCTAGAACCAAATaGAGATGTTCCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHVARTK*RCSKCP
Trigger: GGGGCATTTGGAACATCTGCATTTGGTTCTAGCAAC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCGCCAGTTGTGGTACCTaGTCCCACCTGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFASCGT*SHLVLW
Trigger: CCACAGAACCAGGTGGGAGCAGGTACCACAACTGGC...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGCTGAAGAGTCCTGTTaGGCTGGAAGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVAEESC*AGSGWR
Trigger: TCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTGCTGAAGAGTCCTGTTaGGCTGGAAGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPAEESC*AGSGWR
Trigger: TCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGC...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATGCCTGTCCAGCACCAAGAGCTGTTCCAAATCCTGCACCAAGCCCAGTTCCAAATCCCATGGTGTTGGTaGTTGGCTGTCCTATGGTGC +
Preference number: 4 (lower is better)
Translates to: MPVQHQELFQILHQAQFQIPWCW*LAVLWC
Trigger: GCACCATAGGACAGCCAAGCACCAACACCATGGGAT...TTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCTCTTGGTGCTGGACAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRCSCSK*CPSAGV
Trigger: AACACCAGCACTGGGACAGCATTTGGAACAGGAACA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCAGCTGTTCCAAATCCTaGACCAAGCCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VAVVVLNPGAPKAPVPRGSCSKS*TKPSSK
Trigger: CTTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCT...GCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAACQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTGGTGTCTGTGAGTTTTaGTCCTCCGCTATCACACAG +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVGVCEF*SSAITQ
Trigger: CTGTGTGATAGCGGAGGAGCAAAACTCACAGACACC...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAATCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQSNSWQ*RVSSSR
Trigger: TCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGA...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGTCAGATTCCATGTGTaGTCGCACAGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGVRFHV*SHSFGL
Trigger: GAGGCCAAAGCTGTGCGAGCACACATGGAATCTGAC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATGCTGCGCTCTGGAGGTaGCAGGTCTTCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNAALWR*QVFQEP
Trigger: GGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTCCTGAATTAGGCTGCTaGGCTCTGGAGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAPELGC*ALEVPG
Trigger: ACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGG...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGGACTGTGATGCAAAGTaGCTGGGGCTCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKDCDAK*LGLTGS
Trigger: GGAGCCTGTGAGCCCCAGGCACTTTGCATCACAGTC...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAACAAGTGGAGGATGCTaGTTCTGGCAGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCETSGGC*FWQQGG
Trigger: CCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGT...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGCAAAGGCCCTCTaGCTGCCCCTAACGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSVAKAL*LPLTPN
Trigger: GTTGGGCGTTAGGGGCAGGCAGAGGGCCTTTGCTAC...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGGGATGAGAAGAGACTaGTCCCTGTGCTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGGMRRD*SLCLQF
Trigger: GAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATTCCCACCTGGTTCTGTaGGCCCTTCCTGTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHSHLVL*ALPVSL
Trigger: CAGGCTAACAGGAAGGGCCCACAGAACCAGGTGGGA...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTCCCACCTGGTTCTGTaGGCCCTTCCTGTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWSHLVL*ALPVSL
Trigger: CAGGCTAACAGGAAGGGCCCACAGAACCAGGTGGGA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGCAGSG*RRPKQA
Trigger: GGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTAGAGTCCTGTTGCGCTaGAAGTGGCTGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPRVLLR*KWLEKT
Trigger: GGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCT...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHAVLWC*YYQRKS
Trigger: GCTTTTCCTTTGGTAATACCAGCACCATAGGACAGC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCATGGTATCCAAAACTaGCTCCTGGGTGATATCTAC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHHGIQN*LLGDIY
Trigger: GTAGATATCACCCAGGAGCCAGTTTTGGATACCATG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TGCCAGTCCACCAACTGCATGGTGAGCAGCTCCCGGACTGACTGGCTACCCACAGGAATCCAAACTCCATaGAATCGGCAATCTGATGAT +
Preference number: 4 (lower is better)
Translates to: CQSTNCMVSSSRTDWLPTGIQTP*NRQSDD
Trigger: ATCATCAGATTGCCGATTCCATGGAGTTTGGATTCC...TGTGGGTAGCCAGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529063.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CAATCTGAGGTGTGGCAGTACAGGATAGCCAGCGGGAGAAAGCTCTTCTTCGCTTCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: QSEVWQYRIASGRKLFFASSSFR*PHRASH
Trigger: ATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGA...AGCGAAGAAGAGCTTTCTCCCGCTGGCTATCCTGTACTGCCACACCTCAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCCGCAGTCTCTCATCCTaGATGAAGGAGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLRSLSS*MKESAW
Trigger: CCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCG...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHSKYQR*IARERF
Trigger: GAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGCCTCGTGGATCCATTTaGCAGGTACACGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWPRGSI*QVHGAS
Trigger: AGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGG...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVTALAS*IHLAGT
Trigger: TGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGT...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATCCACGCGCAGCAGGTTaGCTACACGTTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHPRAAG*LHVWPC
Trigger: ACATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGG...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCCCACGCGCAGCAGGTTaGCTACACGTTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFPRAAG*LHVWPC
Trigger: ACATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGG...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATCATAGTCCTCAGGCATaGGAAGCCGGCCAATGTGGG +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHHSPQA*EAGQCG
Trigger: CCCACATTGGCCGGCTTCCCATGCCTGAGGACTATG...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCATAGTCCTCAGGCATaGGAAGCCGGCCAATGTGGG +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLHSPQA*EAGQCG
Trigger: CCCACATTGGCCGGCTTCCCATGCCTGAGGACTATG...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGCAGGGAACCTCTGTGTaGTGTGAATGGGCATGTGAC +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWQGTSV*CEWACD
Trigger: GTCACATGCCCATTCACACCACACAGAGGTTCCCTG...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTACGCGGCCGCCACTCTaGGTCGACCCTGTTATTCAT +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGATRPPL*VDPVIH
Trigger: ATGAATAACAGGGTCGACCCAGAGTGGCGGCCGCGT...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR TCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHKAVLF*PYAKPE
Trigger: TTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTT...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLRLVVC*FCWPKR
Trigger: TCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCT...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTGCAGACACAGGTTCCTaGTCCTCAGGCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLADTGS*SSGMLS
Trigger: AGAGAGCATGCCTGAGGATCAGGAACCTGTGTCTGC...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATTGGAAGGCAGGCGACTaGAGCGTTGATCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNWKAGD*SVDPVP
Trigger: TGGCACTGGATCAACGCTTCAGTCGCCTGCCTTCCA...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGGGCCAGAGAGCAGGCCTCACTGATCCTTTTGCCTGTGAGGTAGCTGAATACACTTCCTCTTCAATCTaGGGTGTGGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: LGQRAGLTDPFACEVAEYTSSSI*GVAVQD
Trigger: ATCCTGTACTGCCACACCTCAGATTGAAGAGGAAGT...GTATTCAGCTACCTCACAGGCAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR TCA 90 bp GCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTGAATGTATTCACGGGGTTCATTGAGCAGCTCCCGGACTaGCTGGCTACCCACAAACTG +
Preference number: 4 (lower is better)
Translates to: AGESSSSLQNLNVFTGFIEQLPD*LATHKL
Trigger: CAGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTC...AATGAACCCCGTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGC +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAESAWS*CQSTNC
Trigger: GCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGC +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRESAWS*CQSTNC
Trigger: GCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTC...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGATGTTTCCCAATCCTaGATTAGGCTGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWDVSQS*IRLLRS
Trigger: AGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATC...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTTGGCCATGTCTGACTaGGCCAGGCGATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVLAMSD*ARRSLA
Trigger: TGCTAAAGATCGCCTGGCTCAGTCAGACATGGCCAA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGTTCTATCAGGAGGATaGTGCAGACTCAGCACCACG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAVLSGG*CRLSTT
Trigger: CGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAAC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGTTCTATCAGGAGGATaGTGCAGACTCAGCACCACG +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVVLSGG*CRLSTT
Trigger: CGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAAC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGCGCAAAGGGACTCGCTaGGGGTCTGGTGTTGAGTCG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALRKGTR*GSGVES
Trigger: CGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCG...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAGATCAATCCCTCCGTaGCAGGCATTCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNRSIPP*QAFTSA
Trigger: GGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCT...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGAGTCTCAGCAAGACTaGAAACCAGGGACCAAACCA +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLESQQD*KPGTKP
Trigger: TGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATTCAGGAGTCCCCTGCTaGCACCCGCCGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDSGVPC*HPPLTE
Trigger: CTCTGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGA...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAATCAGGAGTCCCCTGCTaGCACCCGCCGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQSGVPC*HPPLTE
Trigger: CTCTGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGA...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCTCAGGAGTCCCCTGCTaGCACCCGCCGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRSGVPC*HPPLTE
Trigger: CTCTGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGA...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACATCAGGAGTCCCCTGCTaGCACCCGCCGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTSGVPC*HPPLTE
Trigger: CTCTGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGA...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGTGTCAGGAGTCCCCTaGTGCCACCCGCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASVSGVP*CHPPLT
Trigger: TGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGACAC...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAAGTGTCAGGAGTCCCCTaGTGCCACCCGCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQVSGVP*CHPPLT
Trigger: TGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGACAC...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAACTGGTCCCTGTGCTTaGAGTTCCAAACAAGGTATT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRTGPCA*SSKQGI
Trigger: AATACCTTGTTTGGAACTGCAAGCACAGGGACCAGT...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGCTGAAGAGTCCTGTTaGGCTGGAAGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNAEESC*AGSGWR
Trigger: TCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GTGGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCTGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VAVVVLNPGAPKAPVPRGCSCSK*CPSAGV
Trigger: AACACCAGCACTGGGACAGCATTTGGAACAGGAACA...GCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGAGCTGTTCCAAATCCTaGACCAAGCCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWSCSKS*TKPSSK
Trigger: CTTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCT...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCAGCTGTTCCAAATCCTaGACCAAGCCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCSCSKS*TKPSSK
Trigger: CTTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCT...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGCWRTA*WAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTTCTGAGAGCTGCCACACCGGTTTTCCAGCCAACAGAGCAAAGATGCGCAGTCAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLRAATPVFQPTEQRCAVRLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...GACTGCGCATCTTTGCTCTGTTGGCTGGAAAACCGGTGTGGCAGCTCTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCGTTAGACTATTGATGTaGTGCTGGAGAACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VAVVVLNPGAPKAPVPRGVRLLM*CWRTAC
Trigger: GCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAAC...GCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCCATTAAGAGCCATCTaGAAGGGCGTAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCPLRAI*KGVVWL
Trigger: AAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGATAGCCAGCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTGAATGTATTCACTGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RIASGRKLFFAPEFECIHCQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...GTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGCTGGCTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR GCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATCTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNLDEGV*LELMPV
Trigger: GACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAG...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGGTGTCTGTGAGTTTTaGTCCTCCGCTATCACACAG +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGGVCEF*SSAITQ
Trigger: CTGTGTGATAGCGGAGGAGCAAAACTCACAGACACC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGGTGTCTGTGAGTTTTaGTCCTCCGCTATCACACAG +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCGVCEF*SSAITQ
Trigger: CTGTGTGATAGCGGAGGAGCAAAACTCACAGACACC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGAAGGATCTGCTGTTATaGTTCGAGGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGKDLLL*FEAPAA
Trigger: AGCTGCTGGAGCCTCGAAGCATAACAGCAGATCCTT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGCTGCGCTCTGGAGGTaGCAGGTCTTCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALAALWR*QVFQEP
Trigger: GGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCTGAATTAGGCTGCTaGGCTCTGGAGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLPELGC*ALEVPG
Trigger: ACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGG...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCACCTGAATTAGGCTGCTaGGCTCTGGAGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSPELGC*ALEVPG
Trigger: ACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGG...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCCCTGAGCAATCCACCTaGTGTATATGGCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLPEQST*CIWRSI
Trigger: AATGCTCCGCCATATACAGCAGGTGGATTGCTCAGG...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACTTCTTTGGGGGATTCTaGCAAAGGAGCTTTATTGAC +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHFFGGF*QRSFID
Trigger: GTCAATAAAGCTCCTTTGGCAGAATCCCCCAAAGAA...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGTGGAGGTAGCTGGCTaGCTAAATGAACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCVEVAG*LNELVP
Trigger: TGGAACCAGTTCATTTAGCCAGCCAGCTACCTCCAC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGTGGAGGTAGCTGGCTaGCTAAATGAACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLVEVAG*LNELVP
Trigger: TGGAACCAGTTCATTTAGCCAGCCAGCTACCTCCAC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCATCCCACCTGGTTCTGTaGGCCCTTCCTGTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSSHLVL*ALPVSL
Trigger: CAGGCTAACAGGAAGGGCCCACAGAACCAGGTGGGA...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGTACCTGCTCCCACCTaGTTCTGTGGGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVVPAPT*FCGPFL
Trigger: CAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTAC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCAAACAAGCCAGTTGTaGTACCTGCTCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPQTSQL*YLLPPG
Trigger: ACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTG...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTTGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGACAGSG*RRPKQA
Trigger: GGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCA...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGAGAGTCCTGTTGCGCTaGAAGTGGCTGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKRVLLR*KWLEKT
Trigger: GGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACAGAGTCCTGTTGCGCTaGAAGTGGCTGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNRVLLR*KWLEKT
Trigger: GGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAGCCAAAGAGACCACCTaGATTTGTTCCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRAKETT*ICSKSS
Trigger: ACTGGATTTGGAACAAATCCAGGTGGTCTCTTTGGC...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLCSLAK*FAEEAG
Trigger: ACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACA...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTCATGGTGTTGGTGCTTaGCTGTCCTATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVHGVGA*LSYGAG
Trigger: ACCAGCACCATAGGACAGCCAAGCACCAACACCATG...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATCATGGTGTTGGTGCTTaGCTGTCCTATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNHGVGA*LSYGAG
Trigger: ACCAGCACCATAGGACAGCCAAGCACCAACACCATG...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGCCAGGCTGTGAGGCTTaGGTTACTCCAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGPGCEA*VTPNNP
Trigger: GGGATTATTTGGAGTAACCCAAGCCTCACAGCCTGG...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCQRARH*LYQMKV
Trigger: CACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLQRARH*LYQMKV
Trigger: CACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTG...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCAAAGAGATGTGACTTaGCTGTGCCTGTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHQRDVT*LCLLFV
Trigger: TACAAACAACAGGCACAGCCAAGTCACATCTCTTTG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTATGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLCKGVV*LAGGKG
Trigger: TCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCA...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVSSSFR*PHRASH
Trigger: ATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCTTCAATCTGAGGTGTaGCAGTACAGGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCLQSEV*QYRIAS
Trigger: GCTGGCTATCCTGTACTGCCACACCTCAGATTGAAG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACGTTTCCAATCCAACTaGGAGCACACGTTTATTTGC +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRRFQSN*EHTFIC
Trigger: GCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACAATGGAGGCTGTTGGTaGAAGCAAATACCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHNGGCW*KQIPKM
Trigger: CATCTTTGGTATTTGCTTCCACCAACAGCCTCCATT...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAGVSNS*QCRVSS
Trigger: GCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCC...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTACGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLRMMSL*QRFQCS
Trigger: TGAGCACTGGAACCGCTGCCACAAGCTCATCATCCG...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFRMMSL*QRFQCS
Trigger: TGAGCACTGGAACCGCTGCCACAAGCTCATCATCCG...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATCCACCTGCTGTATATaGCGGAGCATTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRSTCCI*RSISMT
Trigger: AGTCATTGAAATGCTCCGCCATATACAGCAGGTGGA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCCATAGTCCTCAGGCATaGGAAGCCGGCCAATGTGGG +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAHSPQA*EAGQCG
Trigger: CCCACATTGGCCGGCTTCCCATGCCTGAGGACTATG...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTATGCGCAGTTCGTCCATaGCATAGTCCTCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLCAVRP*HSPQAW
Trigger: CCATGCCTGAGGACTATGCCATGGACGAACTGCGCA...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCACAGGGAACCTCTGTGTaGTGTGAATGGGCATGTGAC +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAQGTSV*CEWACD
Trigger: GTCACATGCCCATTCACACCACACAGAGGTTCCCTG...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGCAGGGAACCTCTGTGTaGTGTGAATGGGCATGTGAC +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVQGTSV*CEWACD
Trigger: GTCACATGCCCATTCACACCACACAGAGGTTCCCTG...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCTCTGGAAGGGGTAGATaGAGGGTGGGAAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCSGRGR*RVGNAL
Trigger: CAAAGCATTTCCCACCCTCCATCTACCCCTTCCAGA...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGAGCTGGCTGGCTAAATaGACTGGTTCCAAACAATCC +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWSWLAK*TGSKQS
Trigger: GGATTGTTTGGAACCAGTTCATTTAGCCAGCCAGCT...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAAAGACCTCCAGGCTGTaGGGCTTGGGTTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLKTSRL*GLGYSK
Trigger: TTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTT...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAAAGACCTCCAGGCTGTaGGGCTTGGGTTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEKTSRL*GLGYSK
Trigger: TTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTT...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAAGACCTCCAGGCTGTaGGGCTTGGGTTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHKTSRL*GLGYSK
Trigger: TTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCCCAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: GCRSIKSRGPKGSCTKRPSMLDY*CAAGEQ
Trigger: CTGTTCTCCAGCAGCACATCAATAGTCTAACATACT...GGGCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCACTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWALLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTATGCTCTTCTTGGGCATaGATGCTCCATTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLCSSWA*MLHWLG
Trigger: CCCTAGCCAATGGAGCATTCATGCCCAAGAAGAGCA...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTTGCTCTTCTTGGGCATaGATGCTCCATTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGACSSWA*MLHWLG
Trigger: CCCTAGCCAATGGAGCATTCATGCCCAAGAAGAGCA...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACTGCTCTTCTTGGGCATaGATGCTCCATTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNCSSWA*MLHWLG
Trigger: CCCTAGCCAATGGAGCATTCATGCCCAAGAAGAGCA...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCTCTCCATCCTGCTGGTaGTTCTCATCAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCSPSCW*FSSTGL
Trigger: CAAACCTGTTGATGAGAATCACCAGCAGGATGGAGA...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTCTCCATCCTGCTGGTaGTTCTCATCAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLSPSCW*FSSTGL
Trigger: CAAACCTGTTGATGAGAATCACCAGCAGGATGGAGA...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWSSLFP*NCFQSS
Trigger: GGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCT...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGCAGACACAGGTTCCTaGTCCTCAGGCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAADTGS*SSGMLS
Trigger: AGAGAGCATGCCTGAGGATCAGGAACCTGTGTCTGC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGCAATGATGCTTTCATaGTCTGTAAGACATGTGGAT +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHAMMLS*SVRHVD
Trigger: ATCCACATGTCTTACAGATCATGAAAGCATCATTGC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTTCCCTTGCCATAGGTaGCAGACTTTTCACGAGGGA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVFPCHR*QTFHEG
Trigger: TCCCTCGTGAAAAGTCTGTCACCTATGGCAAGGGAA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCTGTGTTTTAATTTaGGCTCCAGAGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRCCVLI*APEVSD
Trigger: ATCAGACACCTCTGGAGCTCAAATTAAAACACAGCA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGCTGCATAGTCATGAATaGCAGCAACTCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGLHSHE*QQLPDW
Trigger: CCAATCTGGGAGTTGCTGTCATTCATGACTATGCAG...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAGAGCAGCTCCCGGACTaGCTGGCTACCCACAAACTG +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEEQLPD*LATHKL
Trigger: CAGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTC...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGAGCAGCTCCCGGACTaGCTGGCTACCCACAAACTG +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKEQLPD*LATHKL
Trigger: CAGTTTGTGGGTAGCCAGTCAGTCCGGGAGCTGCTC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACCACCAACTGCATGGTaGGCAGCTCCCGGACTGACT +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRPPTAW*AAPGLT
Trigger: AGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCCACCAACTGCATGGTaGGCAGCTCCCGGACTGACT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSPPTAW*AAPGLT
Trigger: AGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGC +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVESAWS*CQSTNC
Trigger: GCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAGTCTCTCATCCTGGATaGAGGAGTCTGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEVSHPG*RSLLGA
Trigger: AGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGAC...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTGTCTCTCATCCTGGATaGAGGAGTCTGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAVSHPG*RSLLGA
Trigger: AGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGAC...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAGTCTCTCATCCTGGATaGAGGAGTCTGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQVSHPG*RSLLGA
Trigger: AGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGAC...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR TCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTTATTTGCTTCTTTTCTaGGAGCTGCCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVYLLLF*ELPHRF
Trigger: AAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATA...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTCGAAGTGGTGTCTGTaGGTTTTGCTCCTCCGCTAT +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVSKWCL*VLLLRY
Trigger: ATAGCGGAGGAGCAAAACTCACAGACACCACTTCGA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGACTTCTCACGTATGCCTaGGTTGTCAATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGLLTYA*VVNVQE
Trigger: CTCCTGCACATTGACAACTCAGGCATACGTGAGAAG...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTGATGTTTCCCAATCCTaGATTAGGCTGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPDVSQS*IRLLRS
Trigger: AGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATC...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGATGTTTCCCAATCCTaGATTAGGCTGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSDVSQS*IRLLRS
Trigger: AGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGACTCCAGGTCATTACCTaGGCAATCCACCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGLQVIT*AIHLLY
Trigger: ATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAG...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATTGGCCATGTCTGACTaGGCCAGGCGATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCELAMSD*ARRSLA
Trigger: TGCTAAAGATCGCCTGGCTCAGTCAGACATGGCCAA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACGTTCTATCAGGAGGATaGTGCAGACTCAGCACCACG +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYVLSGG*CRLSTT
Trigger: CGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAAC...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCCTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGG +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFALRVWC*VGGSIR
Trigger: CCTGATAGAACCTCCGACTCAACACCAGACCCTCAG...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGG +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAALRVWC*VGGSIR
Trigger: CCTGATAGAACCTCCGACTCAACACCAGACCCTCAG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACGCAAAGGGACTCGCTaGGGGTCTGGTGTTGAGTCG +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPERKGTR*GSGVES
Trigger: CGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCGCAAAGGGACTCGCTaGGGGTCTGGTGTTGAGTCG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSRKGTR*GSGVES
Trigger: CGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACAGATCAATCCCTCCGTaGCAGGCATTCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYRSIPP*QAFTSA
Trigger: GGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCT...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATGCCAAAGCCACCTGTaGCACCCCCAAAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVCQSHL*HPQRVF
Trigger: GAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCA...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCATGCCAAAGCCACCTGTaGCACCCCCAAAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSCQSHL*HPQRVF
Trigger: GAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCA...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTGCCAAAGCCACCTGTaGCACCCCCAAAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGCQSHL*HPQRVF
Trigger: GAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTTGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPCRCSK*PSTSSA
Trigger: GGCACTACTAGTGGAGGGGCATTTGGAACATCTGCA...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAGAGACTGGTCCCTGTaGTTGCAGTTCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNRDWSL*LQFQTR
Trigger: CCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCT...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGAGCTGTTCCAAATCCTaGACCAAGCCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVSCSKS*TKPSSK
Trigger: CTTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLCWRTA*WAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCA...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVRLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCGGGCGTAGTCTGGCTTaGAGGAGGCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGGRSLA*RRQRSS
Trigger: ACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCC...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGACCATTAAGAGCCATCTaGAAGGGCGTAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGPLRAI*KGVVWL
Trigger: AAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGG...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGACAACCCTCCCTAACTaGTCCACCTCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALTTLPN*STSGLW
Trigger: CCAGAGCCCAGAGGTGGAGCAGTTAGGGAGGGTTGT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAACAACCCTCCCTAACTaGTCCACCTCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVTTLPN*STSGLW
Trigger: CCAGAGCCCAGAGGTGGAGCAGTTAGGGAGGGTTGT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAGGGACTAGGCCTAGTTaGCTACGTGTACCCACTGTT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEGTRPS*LRVPTV
Trigger: AACAGTGGGTACACGTAGGCAACTAGGCCTAGTCCC...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTGGGACTAGGCCTAGTTaGCTACGTGTACCCACTGTT +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAGTRPS*LRVPTV
Trigger: AACAGTGGGTACACGTAGGCAACTAGGCCTAGTCCC...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCELDEGV*LELMPV
Trigger: GACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAGGTGTCTGTGAGTTTTaGTCCTCCGCTATCACACAG +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGGVCEF*SSAITQ
Trigger: CTGTGTGATAGCGGAGGAGCAAAACTCACAGACACC...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGTCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALSNSWQ*RVSSSR
Trigger: TCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGA...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCGTCAGATTCCATGTGTaGTCGCACAGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VDPFGRYTELLGKESLFSVRFHV*SHSFGL
Trigger: GAGGCCAAAGCTGTGCGAGCACACATGGAATCTGAC...GCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTAATCCTGAATTAGGCTaGTGCGCTCTGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLNPELG*CALEVP
Trigger: TGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATT...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCGACTGTGATGCAAAGTaGCTGGGGCTCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGDCDAK*LGLTGS
Trigger: GGAGCCTGTGAGCCCCAGGCACTTTGCATCACAGTC...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCATGGAGGGTGGGAAATaGTTTGGAGCTAACATGGGA +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLMEGGK*FGANMG
Trigger: TCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCAT...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGTAGCAAAGGCCCTCTaGCTGCCCCTAACGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAVAKAL*LPLTPN
Trigger: GTTGGGCGTTAGGGGCAGGCAGAGGGCCTTTGCTAC...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TTTCTGAGAGCTGCCACACCGGTTTTCCAGCCAACAGAGCAAAGATGCGCAGTCAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FLRAATPVFQPTEQRCAVSCKTT*PKEGAR
Trigger: TCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCT...GACTGCGCATCTTTGCTCTGTTGGCTGGAAAACCGGTGTGGCAGCTCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVWVVVA*PNGLLK
Trigger: CTTCAGCAAACCATTTGGCCAGGCTACAACCACCCA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVWVVVA*PNGLLK
Trigger: CTTCAGCAAACCATTTGGCCAGGCTACAACCACCCA...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAAGATGCGCAGTCTCTCATCCTGGATGAAGGAGTCTGCTTGGAGCTGATGCCATGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KDAQSLILDEGVCLELMPWVVVA*PNGLLK
Trigger: CTTCAGCAAACCATTTGGCCAGGCTACAACCACCCA...TGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLCLAVL*CWYYQR
Trigger: CCTTTGGTAATACCAGCACCATAGGACAGCCAAGCA...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWCLAVL*CWYYQR
Trigger: CCTTTGGTAATACCAGCACCATAGGACAGCCAAGCA...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGTGGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGCATGGTGTTGGTGCTTaGCTGTCCTATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGRAGCQFIMSRCSKSLLHGVGA*LSYGAG
Trigger: ACCAGCACCATAGGACAGCCAAGCACCAACACCATG...CAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCCCGCCCTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGATAATCCCATGGTGTTaGTGCTTGGCTGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWIIPWC*CLAVLW
Trigger: CCATAGGACAGCCAAGCACCAACACCATGGGATTAT...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGCTCCAAATAATCCCATaGTGTTGGTGCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWLQIIP*CWCLAV
Trigger: GACAGCCAAGCACCAACACCATGGGATTATTTGGAG...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTCCAGGCTGTGAGGCTTaGGTTACTCCAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVPGCEA*VTPNNP
Trigger: GGGATTATTTGGAGTAACCCAAGCCTCACAGCCTGG...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGGGCTGCCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RAGCQFIMSRCSKSLLGCQRARH*LYQMKV
Trigger: CACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTG...GCAGCCCAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCCCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNQRARH*LYQMKV
Trigger: CACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTG...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAAGCTACTGGGGCCTaGGGGGCTCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALKATGA*GAPKPK
Trigger: TTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGTAGTAAGAGCCTTCTaGGCTGCTGGATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCVVRAF*AAGFVG
Trigger: ACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTAC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGCTCTGGCTCTGAGGTaGAGGTGCAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAALALR*RCRFAI
Trigger: AATGGCAAACCTGCACCTCCACCTCAGAGCCAGAGC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCCGAGTTTTCGACGAGTaGGATGCTGAAATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSRVFDE*DAEMGS
Trigger: ACTCCCCATTTCAGCATCCCACTCGTCGAAAACTCG...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRLKMLL*EYDILA
Trigger: TGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACCAGACCAAGAGGATGTaGATGGGATATTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHQTKRM*MGYSLK
Trigger: CTTTAATGAATATCCCATCCACATCCTCTTGGTCTG...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTTCAATCTGAGGTGTaGCAGTACAGGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPLQSEV*QYRIAS
Trigger: GCTGGCTATCCTGTACTGCCACACCTCAGATTGAAG...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTACGCAGTCTCTCATCCTaGATGAAGGAGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLRSLSS*MKESAW
Trigger: CCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCG...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVSKYQR*IARERF
Trigger: GAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp AGTCGGAGGTTCTATCAGGAGGATGATGCAGACTCAGCACCACGCGCAGCAGGTAGAAATGGAGGCTGTTaGTGGAAGCAAATACCAAAG +
Preference number: 4 (lower is better)
Translates to: SRRFYQEDDADSAPRAAGRNGGC*WKQIPK
Trigger: CTTTGGTATTTGCTTCCACCAACAGCCTCCATTTCT...ACCTGCTGCGCGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAACCTCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASGVSNS*QCRVSS
Trigger: GCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCC...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTGGGGTCTCCAACAGCTaGCAGTGCCGGGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLGVSNS*QCRVSS
Trigger: GCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCC...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTCCTCGTGGATCCATTTaGCAGGTACACGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAPRGSI*QVHGAS
Trigger: AGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGG...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVTALAS*IHLAGT
Trigger: TGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNRMMSL*QRFQCS
Trigger: TGAGCACTGGAACCGCTGCCACAAGCTCATCATCCG...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAATAGTAGCACCACCAGGAGAGGCCAGGGCTGGTGTACTGAGCTTCATACCTTCCACCTGCTGTATATaGCGGAGCATTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: GIVAPPGEARAGVLSFIPSTCCI*RSISMT
Trigger: AGTCATTGAAATGCTCCGCCATATACAGCAGGTGGA...AGGTATGAAGCTCAGTACACCAGCCCTGGCCTCTCCTGGTGGTGCTACTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGGAAGCCGGCCAATGTaGGGAGCCAAGAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAGSRPM*GAKRRK
Trigger: TTTGCGCCTCTTGGCTCCCCACATTGGCCGGCTTCC...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGCATAGTCCTCAGGCATaGGAAGCCGGCCAATGTGGG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALHSPQA*EAGQCG
Trigger: CCCACATTGGCCGGCTTCCCATGCCTGAGGACTATG...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAKALNK*RMLLLA
Trigger: TGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAGGAAGCTGGTTGGCATaGAGGGTCACAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQGSWLA*RVTRSR
Trigger: TCTGGATCTTGTGACCCTCCATGCCAACCAGCTTCC...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAGTAGGGAAGCTGGTTaGCATGGAGGGTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGSREAG*HGGSQD
Trigger: ATCTTGTGACCCTCCATGCCAACCAGCTTCCCTACT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGCTTTGGAGCTAACATaGGATGAACAGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGALELT*DEQGGL
Trigger: TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CAA 72 bp GCTCCTGTACCAAGAGGCCCTCCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCCTGTCCAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: APVPRGPPILGW*FPNKDACPAPR
Trigger: TCTTGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGGCCTCTTGGTACAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CAA 72 bp AAAGGCTCCTGTACCAAGAGGCCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KGSCTKRPSNLR*VVPKQRCLSST
Trigger: GGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGGCCTCTTGGTACAGGAGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR TCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTTCCTGGTTTAGTCTGTaGATTTCCAAAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPSWFSL*ISKEAS
Trigger: GGAGGCCTCTTTGGAAATTCACAGACTAAACCAGGA...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATCCTGGTTTAGTCTGTaGATTTCCAAAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGSWFSL*ISKEAS
Trigger: GGAGGCCTCTTTGGAAATTCACAGACTAAACCAGGA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCAGCTGGCTGGCTAAATaGACTGGTTCCAAACAATCC +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSSWLAK*TGSKQS
Trigger: GGATTGTTTGGAACCAGTTCATTTAGCCAGCCAGCT...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAAGCTGGCTGGCTAAATaGACTGGTTCCAAACAATCC +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWASWLAK*TGSKQS
Trigger: GGATTGTTTGGAACCAGTTCATTTAGCCAGCCAGCT...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTACCATATGCAAAGCCTaGATTAGTGGTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPTICKA*ISGGGA
Trigger: AGCTCCTCCACCACTAATTCAGGCTTTGCATATGGT...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTACCATATGCAAAGCCTaGATTAGTGGTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVTICKA*ISGGGA
Trigger: AGCTCCTCCACCACTAATTCAGGCTTTGCATATGGT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: ELLGKESLFSPRFRGLQQRLVVC*FCWPKR
Trigger: TCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCT...CTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTTCCTTACCCAGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACCCCATCAAAGAGATGTaGCTTGGCTGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNPIKEM*LGCACC
Trigger: ACAACAGGCACAGCCAAGTCACATCTCTTTGATGGG...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGCAGGCCGGTATTCTTTaGATTGAGCTCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKQAGIL*IELPVS
Trigger: GGAAACAGGGAGCTCAATTCAAAGAATACCGGCCTG...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGAGATGCAATATGTGTTaGGGCAGACACAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVRCNMC*GRHRFL
Trigger: CAGGAACCTGTGTCTGCCTCAACACATATTGCATCT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAGATGCAATATGTGTTaGGGCAGACACAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGRCNMC*GRHRFL
Trigger: CAGGAACCTGTGTCTGCCTCAACACATATTGCATCT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAGGAGAACAGATTTCTTaGGAAGTATCTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRGEQIS*EVSALE
Trigger: TTCCAAAGCAGATACTTCTCAAGAAATCTGTTCTCC...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTGAAATGAGCGTCCCATaGATAGGGCCATGTCCATCA +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLEMSVP*IGPCPS
Trigger: TGATGGACATGGCCCTATTCATGGGACGCTCATTTC...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGAAATGAGCGTCCCATaGATAGGGCCATGTCCATCA +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHEMSVP*IGPCPS
Trigger: TGATGGACATGGCCCTATTCATGGGACGCTCATTTC...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTGAAATGAGCGTCCCATaGATAGGGCCATGTCCATCA +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAEMSVP*IGPCPS
Trigger: TGATGGACATGGCCCTATTCATGGGACGCTCATTTC...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACTGAGTTTTTCTAAGTaGACTTTGAATGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRLSFSK*TLNGDS
Trigger: TGAGTCCCCATTCAAAGTTCACTTAGAAAAACTCAG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACCAGATTGGGGACAATaGGAGGACACAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEPDWGQ*EDTVHP
Trigger: TGGATGAACTGTGTCCTCTCATTGTCCCCAATCTGG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWLRSRI*MYSRGS
Trigger: TGAACCCCGTGAATACATTCAAATTCTGGAGCGAAG...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGACCACCAACTGCATGGTaGGCAGCTCCCGGACTGACT +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRPPTAW*AAPGLT
Trigger: AGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGG...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTATTTGCTTCTTTTCTaGGAGCTGCCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWYLLLF*ELPHRF
Trigger: AAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATA...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAGCTCCAGCAGCTGGTTaGGATCATAATGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQAPAAG*DHNVCH
Trigger: GTGACAGACATTATGATCTCAACCAGCTGCTGGAGC...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR TCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGCTCCAGCAGCTGGTTaGGATCATAATGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLAPAAG*DHNVCH
Trigger: GTGACAGACATTATGATCTCAACCAGCTGCTGGAGC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCTTCTCACGTATGCCTaGGTTGTCAATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VDPFGRYTELLGKESLFSLLTYA*VVNVQE
Trigger: CTCCTGCACATTGACAACTCAGGCATACGTGAGAAG...GCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACGATGTTTCCCAATCCTaGATTAGGCTGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYDVSQS*IRLLRS
Trigger: AGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATC...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACTCCAGGTCATTACCTaGGCAATCCACCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCELQVIT*AIHLLY
Trigger: ATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCGCAAAGGGACTCGCTaGGGGTCTGGTGTTGAGTCG +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDRKGTR*GSGVES
Trigger: CGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCG...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAGAGTCTCAGCAAGACTaGAAACCAGGGACCAAACCA +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVAESQQD*KPGTKP
Trigger: TGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTC...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTCTAGCTTTCAGCAGCTaGGAGGTAGAGGATGCTTTA +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVLAFSS*EVEDAL
Trigger: TAAAGCATCCTCTACCTCTCAGCTGCTGAAAGCTAG...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATGTGTCAGGAGTCCCCTaGTGCCACCCGCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHVSGVP*CHPPLT
Trigger: TGTGAGCGGCGGGTGGCAGCAGGGGACTCCTGACAC...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGCAAATGTTGAAGTTGTaGCAAAGCCACCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVQMLKL*QSHLCH
Trigger: GTGGCACAGGTGGCTTTGGCACAACTTCAACATTTG...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGTGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKCRCSK*PSTSSA
Trigger: GGCACTACTAGTGGAGGGGCATTTGGAACATCTGCA...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAGAGACTGGTCCCTGTaGTTGCAGTTCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHRDWSL*LQFQTR
Trigger: CCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACAGAGACTGGTCCCTGTaGTTGCAGTTCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNRDWSL*LQFQTR
Trigger: CCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGGCCAGTTGTGGTACCTaGTCCCACCTGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQASCGT*SHLVLW
Trigger: CCACAGAACCAGGTGGGAGCAGGTACCACAACTGGC...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGCTGAAGAGTCCTGTTaGGCTGGAAGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVAEESC*AGSGWR
Trigger: TCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWACSCSK*CPSAGV
Trigger: AACACCAGCACTGGGACAGCATTTGGAACAGGAACA...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTTGGCCGGACTCTAGTGGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LWPDSSGRAGCQFIMSRCNPVLV*PKRPVP
Trigger: AGGAACAGGTCTCTTTGGGCAGACCAATACTGGATT...ACACCTACTCATTATAAACTGACACCCCGCCCTGCCACTAGAGTCCGGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLNPVLV*PKRPVP
Trigger: AGGAACAGGTCTCTTTGGGCAGACCAATACTGGATT...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGTTCCCAAACAAAGATaGCTGTCCAGCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLVPKQR*LSSTKS
Trigger: GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAAC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTGTTCCCAAACAAAGATaGCTGTCCAGCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAVPKQR*LSSTKS
Trigger: GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAAC...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAGTTCCCAAACAAAGATaGCTGTCCAGCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQVPKQR*LSSTKS
Trigger: GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAAC...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNRLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGTTAGACTATTGATGTaGTGCTGGAGAACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVVRLLM*CWRTAC
Trigger: GCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAAC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAGTTAGACTATTGATGTaGTGCTGGAGAACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGVRLLM*CWRTAC
Trigger: GCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAAC...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGATGTGACTTGGCTGTaGCTGTTGTTTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLDVTWL*LLFVKP
Trigger: AGGCTTTACAAACAACAGGCACAGCCAAGTCACATC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTTGCCAGTCCACCAACTaGATGGTGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLCQSTN*MVSSSR
Trigger: CCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACCAACAGAGCAAAGATaGGCAGTCTCTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEPTEQR*AVSHPG
Trigger: TCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTGG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAAGGATCTGCTGTTATaGTTCGAGGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHKDLLL*FEAPAA
Trigger: AGCTGCTGGAGCCTCGAAGCATAACAGCAGATCCTT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGTAGTCCAAAGGATCTaGTGTTATGCTTCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSVVQRI*CYASRL
Trigger: GAGCCTCGAAGCATAACAGCAGATCCTTTGGACTAC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAGTAGTCCAAAGGATCTaGTGTTATGCTTCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGVVQRI*CYASRL
Trigger: GAGCCTCGAAGCATAACAGCAGATCCTTTGGACTAC...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGTAGTCCAAAGGATCTaGTGTTATGCTTCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVVVQRI*CYASRL
Trigger: GAGCCTCGAAGCATAACAGCAGATCCTTTGGACTAC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRSNSWQ*RVSSSR
Trigger: TCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATTGGCAGCGGTTCCAGTaGTCAGCCTTAAATAAGCAA +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNWQRFQ*SALNKQ
Trigger: TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCA...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACCTGAATTAGGCTGCTaGGCTCTGGAGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRPELGC*ALEVPG
Trigger: ACCTGGCACCTCCAGAGCGCAGCAGCCTAATTCAGG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATAATCCTGAATTAGGCTaGTGCGCTCTGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNNPELG*CALEVP
Trigger: TGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATT...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACCTGAGCAATCCACCTaGTGTATATGGCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEPEQST*CIWRSI
Trigger: AATGCTCCGCCATATACAGCAGGTGGATTGCTCAGG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGACTGTGATGCAAAGTaGCTGGGGCTCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRDCDAK*LGLTGS
Trigger: GGAGCCTGTGAGCCCCAGGCACTTTGCATCACAGTC...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGACTGTGATGCAAAGTaGCTGGGGCTCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKDCDAK*LGLTGS
Trigger: GGAGCCTGTGAGCCCCAGGCACTTTGCATCACAGTC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAACAAGTGGAGGATGCTaGTTCTGGCAGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRTSGGC*FWQQGG
Trigger: CCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGT...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACTTTACATTATCTTCATaGATAAAGACCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHFTLSS*IKTQVW
Trigger: CCACACCTGGGTCTTTATGCATGAAGATAATGTAAA...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTGAAAGCGCGGTTCGGTaGGGAAGGGGAAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLESAVR*GRGSVR
Trigger: CCTGACACTTCCCCTTCCCCACCGAACCGCGCTTTC...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPSCKTT*PKEGAR
Trigger: TCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCT...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGTACCTGCTCCCACCTaGTTCTGTGGGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASVPAPT*FCGPFL
Trigger: CAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTAC...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACAAACAAGCCAGTTGTaGTACCTGCTCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAQTSQL*YLLPPG
Trigger: ACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATCAAACAAGCCAGTTGTaGTACCTGCTCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNQTSQL*YLLPPG
Trigger: ACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTG...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGCAGSG*RRPKQA
Trigger: GGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAGAGTCCTGTTGCGCTaGAAGTGGCTGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSRVLLR*KWLEKT
Trigger: GGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCT...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCATGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVACSLAK*FAEEAG
Trigger: ACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACA...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCCATGGTGTTGGTGCTTaGCTGTCCTATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAHGVGA*LSYGAG
Trigger: ACCAGCACCATAGGACAGCCAAGCACCAACACCATG...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCATAATCCCATGGTGTTaGTGCTTGGCTGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSIIPWC*CLAVLW
Trigger: CCATAGGACAGCCAAGCACCAACACCATGGGATTAT...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGCCCTCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCCACCAAATCCAGTATTaGTCTGCCCAAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: RPSNLRLVVPKQRCLSSTHQIQY*SAQRDL
Trigger: CAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTG...GGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEQRARH*LYQMKV
Trigger: CACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNQRARH*LYQMKV
Trigger: CACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTG...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAAAAGCTACTGGGGCCTaGGGGGCTCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEKATGA*GAPKPK
Trigger: TTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGTAGTAAGAGCCTTCTaGGCTGCTGGATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVVVRAF*AAGFVG
Trigger: ACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTAC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGCKGVV*LAGGKG
Trigger: TCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGCTCTGGCTCTGAGGTaGAGGTGCAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALALALR*RCRFAI
Trigger: AATGGCAAACCTGCACCTCCACCTCAGAGCCAGAGC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGCTCTGGCTCTGAGGTaGAGGTGCAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVALALR*RCRFAI
Trigger: AATGGCAAACCTGCACCTCCACCTCAGAGCCAGAGC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATGGTATCCAAAACTaGCTCCTGGGTGATATCTAC +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCHGIQN*LLGDIY
Trigger: GTAGATATCACCCAGGAGCCAGTTTTGGATACCATG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGCATGGTATCCAAAACTaGCTCCTGGGTGATATCTAC +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWHGIQN*LLGDIY
Trigger: GTAGATATCACCCAGGAGCCAGTTTTGGATACCATG...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACCGAGTTTTCGACGAGTaGGATGCTGAAATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYRVFDE*DAEMGS
Trigger: ACTCCCCATTTCAGCATCCCACTCGTCGAAAACTCG...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCGGAACCTCAGGGGCTaGGCTGGGCATTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASRNLRG*AGHCEH
Trigger: GTGTTCACAATGCCCAGCCCAGCCCCTGAGGTTCCG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACACAGTTCATCCACATaGACAGTGCTGTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRHSSST*TVLCFN
Trigger: ATTAAAACACAGCACTGTCCATGTGGATGAACTGTG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAASSSFR*PHRASH
Trigger: ATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTCTTCAATCTGAGGTGTaGCAGTACAGGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGALQSEV*QYRIAS
Trigger: GCTGGCTATCCTGTACTGCCACACCTCAGATTGAAG...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACTGAGATAAAAGAAGAGCAAGACGATGATCCCCTGACTGCTGGGCCAGAGCTTCAATCTGAGGTGTaGCAGTACAGGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QTEIKEEQDDDPLTAGPELQSEV*QYRIAS
Trigger: GCTGGCTATCCTGTACTGCCACACCTCAGATTGAAG...CTCTGGCCCAGCAGTCAGGGGATCATCGTCTTGCTCTTCTTTTATCTCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTCAGATACGAAGGAAGTaGGGAGCAGGCATATCTGTC +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAQIRRK*GAGISV
Trigger: GACAGATATGCCTGCTCCCCACTTCCTTCGTATCTG...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACAGATACGAAGGAAGTaGGGAGCAGGCATATCTGTC +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEQIRRK*GAGISV
Trigger: GACAGATATGCCTGCTCCCCACTTCCTTCGTATCTG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTACAGATACGAAGGAAGTaGGGAGCAGGCATATCTGTC +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLQIRRK*GAGISV
Trigger: GACAGATATGCCTGCTCCCCACTTCCTTCGTATCTG...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGCTGGCCAGCGTAACTaGCCTGTAGCACACCTTCAC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSAGQRN*PVAHLH
Trigger: GTGAAGGTGTGCTACAGGCCAGTTACGCTGGCCAGC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATGCAGGAGGACAAAGATaGCCCACTCCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDAGGQR*PTPRAP
Trigger: AGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGC...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWTALAS*IHLAGT
Trigger: TGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGT...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGATALAS*IHLAGT
Trigger: TGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGT...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGTGCTCGCACAGCTTTaGCCTCGTGGATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALVLAQL*PRGSIW
Trigger: CCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCAC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGGAAGCCGGCCAATGTaGGGAGCCAAGAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRGSRPM*GAKRRK
Trigger: TTTGCGCCTCTTGGCTCCCCACATTGGCCGGCTTCC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACATAGTCCTCAGGCATaGGAAGCCGGCCAATGTGGG +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEHSPQA*EAGQCG
Trigger: CCCACATTGGCCGGCTTCCCATGCCTGAGGACTATG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVSVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTTCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPSVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHKALNK*RMLLLA
Trigger: TGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGAAGCTGGTTGGCATaGAGGGTCACAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAGSWLA*RVTRSR
Trigger: TCTGGATCTTGTGACCCTCCATGCCAACCAGCTTCC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGAGTAGGGAAGCTGGTTaGCATGGAGGGTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKSREAG*HGGSQD
Trigger: ATCTTGTGACCCTCCATGCCAACCAGCTTCCCTACT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGCTTTGGAGCTAACATaGGATGAACAGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGALELT*DEQGGL
Trigger: TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGC...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGCCCAGCTGGCAAGGATaGTGTGGACAGTACCTGACT +
Preference number: 4 (lower is better)
Translates to: HSPNRELVLRTGTEEKHKPSWQG*CGQYLT
Trigger: AGTCAGGTACTGTCCACACCATCCTTGCCAGCTGGG...CTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
3UTR CAA 72 bp AGAGGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACAGCCTGCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGESPKGEYVRL*MCCWRTACWAA
Trigger: TGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CAA 72 bp TGCTCAGCCTTAAATAAGCAAAGGGCCTCTAAGTGCTaGTCAGATTCCATGTGTGCTCGCACAGCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: CSALNKQRASKC*SDSMCARTALA
Trigger: GGCCAAAGCTGTGCGAGCACACATGGAATCTGACAAGCACTTAGAGGCCCTTTGCTTATTTAAGGCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAATTCTGTCCAAATGTTaGAGTTGTGCCAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGILSKC*SCAKAT
Trigger: GGTGGCTTTGGCACAACTTCAACATTTGGACAGAAT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTCCTGGTTTAGTCTGTaGATTTCCAAAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFSWFSL*ISKEAS
Trigger: GGAGGCCTCTTTGGAAATTCACAGACTAAACCAGGA...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTCCTGGTTTAGTCTGTaGATTTCCAAAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWSWFSL*ISKEAS
Trigger: GGAGGCCTCTTTGGAAATTCACAGACTAAACCAGGA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATACCATATGCAAAGCCTaGATTAGTGGTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHTICKA*ISGGGA
Trigger: AGCTCCTCCACCACTAATTCAGGCTTTGCATATGGT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAACCATATGCAAAGCCTaGATTAGTGGTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLTICKA*ISGGGA
Trigger: AGCTCCTCCACCACTAATTCAGGCTTTGCATATGGT...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLRLVVC*FCWPKR
Trigger: TCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCT...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCAAGACCTCCAGGCTGTaGGGCTTGGGTTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGKTSRL*GLGYSK
Trigger: TTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTT...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGATGCTK*RCTGCA
Trigger: AGCACAACCAGTGCACCTTCATTTGGTACAACCAGT...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATGCTCTTCTTGGGCATaGATGCTCCATTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVCSSWA*MLHWLG
Trigger: CCCTAGCCAATGGAGCATTCATGCCCAAGAAGAGCA...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGTGCTCTTCTTGGGCATaGATGCTCCATTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALCSSWA*MLHWLG
Trigger: CCCTAGCCAATGGAGCATTCATGCCCAAGAAGAGCA...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGCACTTTCTGGGGTTTaGGGAATAGGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAALSGV*GIGLAI
Trigger: TATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHSSLFP*NCFQSS
Trigger: GGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAAACTGGCTCCTGGGTaGTATCTACCATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHKLAPG*YLPCHC
Trigger: ACAGTGACATGGTAGATATCACCCAGGAGCCAGTTT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACAGATGCAATATGTGTTaGGGCAGACACAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYRCNMC*GRHRFL
Trigger: CAGGAACCTGTGTCTGCCTCAACACATATTGCATCT...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCCTTGCCATAGGTaGCAGACTTTTCACGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRFPCHR*QTFHEG
Trigger: TCCCTCGTGAAAAGTCTGTCACCTATGGCAAGGGAA...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVLRSRI*MYSRGS
Trigger: TGAACCCCGTGAATACATTCAAATTCTGGAGCGAAG...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GTGTGGCAGTACAGGATAGCCAGCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VWQYRIASGRKLFFAPEFLRSRI*MYSRGS
Trigger: TGAACCCCGTGAATACATTCAAATTCTGGAGCGAAG...AAATTCTGGAGCGAAGAAGAGCTTTCTCCCGCTGGCTATCCTGTACTGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR TCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAACTTCCTCTTCAATCTaGGGTGTGGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVATSSSI*GVAVQD
Trigger: ATCCTGTACTGCCACACCTCAGATTGAAGAGGAAGT...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAAAGAAGAGCAAGACGATaGTCCCCTGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQRRARR*SPDCWA
Trigger: GGCCCAGCAGTCAGGGGATCATCGTCTTGCTCTTCT...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324932.12
ENST00000359171.8
CDS-3UTR TCA 90 bp GCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGATGTTTCGAGTCTGCTTGGAGCTaGTGCCAGTCCACCAACTGC +
Preference number: 4 (lower is better)
Translates to: AEHFNDSNIVQVNKPRCFESAWS*CQSTNC
Trigger: GCAGTTGGTGGACTGGCATCAGCTCCAAGCAGACTC...GAAACATCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGTCTCTCATCCTGGATaGAGGAGTCTGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALVSHPG*RSLLGA
Trigger: AGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGAC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATATTTGCTTCTTTTCTaGGAGCTGCCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGYLLLF*ELPHRF
Trigger: AAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATATTTGCTTCTTTTCTaGGAGCTGCCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAYLLLF*ELPHRF
Trigger: AAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATA...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGCTCCAGCAGCTGGTTaGGATCATAATGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSAPAAG*DHNVCH
Trigger: GTGACAGACATTATGATCTCAACCAGCTGCTGGAGC...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCACCTTCACACTGCGCTaGGAGATGGGTGTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFATFTLR*EMGVVK
Trigger: CTTAACTACACCCATCTCTCAGCGCAGTGTGAAGGT...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAACCTTCACACTGCGCTaGGAGATGGGTGTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSTFTLR*EMGVVK
Trigger: CTTAACTACACCCATCTCTCAGCGCAGTGTGAAGGT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACTTCTCACGTATGCCTaGGTTGTCAATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAALLTYA*VVNVQE
Trigger: CTCCTGCACATTGACAACTCAGGCATACGTGAGAAG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGTVKSL*CVTAPG
Trigger: ACCTGGAGCAGTTACACATCAAAGTGACTTCACTGT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNTVKSL*CVTAPG
Trigger: ACCTGGAGCAGTTACACATCAAAGTGACTTCACTGT...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTTGGCCATGTCTGACTaGGCCAGGCGATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGLAMSD*ARRSLA
Trigger: TGCTAAAGATCGCCTGGCTCAGTCAGACATGGCCAA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTAGATCAATCCCTCCGTaGCAGGCATTCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPRSIPP*QAFTSA
Trigger: GGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCT...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCAGACATGTCACATGTaGCCAAGGGTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLQTCHM*PRVPAH
Trigger: ATGTGCAGGAACCCTTGGTCACATGTGACATGTCTG...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTGTGGCCATATTGCCTaGGATAGCCCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGCGHIA*DSPNTS
Trigger: GCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTGCTTCACACTGCGCTaGGAGATGGGTGTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRCFTLR*EMGVVK
Trigger: CTTAACTACACCCATCTCTCAGCGCAGTGTGAAGCA...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524563.1
CDS-3UTR GCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATCAAATGTTGAAGTTGTaGCAAAGCCACCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHQMLKL*QSHLCH
Trigger: GTGGCACAGGTGGCTTTGGCACAACTTCAACATTTG...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGAGAGACTGGTCCCTGTaGTTGCAGTTCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLRDWSL*LQFQTR
Trigger: CCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCT...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAATCCCATGGTGTTGGTaGTTGGCTGTCCTATGGTGC +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVIPWCW*LAVLWC
Trigger: GCACCATAGGACAGCCAAGCACCAACACCATGGGAT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGATCCCATGGTGTTGGTaGTTGGCTGTCCTATGGTGC +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALIPWCW*LAVLWC
Trigger: GCACCATAGGACAGCCAAGCACCAACACCATGGGAT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACTGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNCSCSK*CPSAGV
Trigger: AACACCAGCACTGGGACAGCATTTGGAACAGGAACA...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATCCCACTGGTATTTGTaGCAAAACCAAAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAASHWYL*QNQRAR
Trigger: GCGGGCTCTTTGGTTTTGGCACAAATACCAGTGGGA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000650171.1
CDS-3UTR GCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATTCCCACTGGTATTTGTaGCAAAACCAAAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNSHWYL*QNQRAR
Trigger: GCGGGCTCTTTGGTTTTGGCACAAATACCAGTGGGA...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324932.12
ENST00000650171.1
CDS-3UTR GCA 90 bp TCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCAAGAGCGTTCCCAAACAAAGATaGCTGTCCAGCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SNLRLVVPKQRCLSSTKSVPKQR*LSSTKS
Trigger: GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAAC...GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp AGAGCCTTCTGGGCTGCTGGATTTGTTGGTTTCAATCTCTTCCTTCTTCTTAGGTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: RAFWAAGFVGFNLFLLLRCWRTA*WAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCA...CCTAAGAAGAAGGAAGAGATTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGCWRTA*WAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSRLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCAAGAGCAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SNLRLVVPKQRCLSSTKSRLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAAAGAGCCTTCTGGGCTaGTGGATTTGTTGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGKSLLG*WICWFQ
Trigger: TTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATCTAGTTTTAGACGGATaGTCCTCCTCCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNLVLDG*SSSSSS
Trigger: TGATGAAGAGGAGGAGGAGCATCCGTCTAAAACTAG...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTGGGCGTAGTCTGGCTTaGAGGAGGCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLGRSLA*RRQRSS
Trigger: ACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCC...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGAGTACGACATTCTTaGACAGAGACACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGGVRHS*TETLGE
Trigger: TTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCC...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCCTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGLDEGV*LELMPV
Trigger: GACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAG...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGCCAACAGAGCAAAGATaGGCAGTCTCTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRPTEQR*AVSHPG
Trigger: TCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTGG...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGAAGGATCTGCTGTTATaGTTCGAGGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRKDLLL*FEAPAA
Trigger: AGCTGCTGGAGCCTCGAAGCATAACAGCAGATCCTT...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCAGCCTTCTCACGTATaGCTGAGTTGTCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: VDPFGRYTELLGKESLFSQPSHV*LSCQCA
Trigger: TGCACATTGACAACTCAGGCATACGTGAGAAGGCTG...GCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAATGGCAGCGGTTCCAGTaGTCAGCCTTAAATAAGCAA +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQWQRFQ*SALNKQ
Trigger: TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCA...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAG +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGTLMCN*SRSLPE
Trigger: CTCAGGTAATGACCTGGAGCAGTTACACATCAAAGT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGACTGTGATGCAAAGTaGCTGGGGCTCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRDCDAK*LGLTGS
Trigger: GGAGCCTGTGAGCCCCAGGCACTTTGCATCACAGTC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAATGGAGGGTGGGAAATaGTTTGGAGCTAACATGGGA +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVAMEGGK*FGANMG
Trigger: TCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCAT...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGTGGAGGTAGCTGGCTaGCTAAATGAACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAVEVAG*LNELVP
Trigger: TGGAACCAGTTCATTTAGCCAGCCAGCTACCTCCAC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGGGATGAGAAGAGACTaGTCCCTGTGCTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALGMRRD*SLCLQF
Trigger: GAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAGGGATGAGAAGAGACTaGTCCCTGTGCTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSGMRRD*SLCLQF
Trigger: GAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCC...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGCAAAGGCATTGTTTTaGGATGAGAAGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVAKALF*DEKRLV
Trigger: GACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGCAAAGGCATTGTTTTaGGATGAGAAGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSAKALF*DEKRLV
Trigger: GACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNSCKTT*PKEGAR
Trigger: TCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTTGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDACAGSG*RRPKQA
Trigger: GGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCA...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGAGTCCTGTTGCGCTaGAAGTGGCTGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKRVLLR*KWLEKT
Trigger: GGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCT...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAWVVVA*PNGLLK
Trigger: CTTCAGCAAACCATTTGGCCAGGCTACAACCACCCA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGCCCTCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RPSNLRLVVPKQRCLSSTAVLWC*YYQRKS
Trigger: GCTTTTCCTTTGGTAATACCAGCACCATAGGACAGC...GGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCTGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: VDPFGRYTELLGKESLFSCLAVL*CWYYQR
Trigger: CCTTTGGTAATACCAGCACCATAGGACAGCCAAGCA...GCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTACATGGTGTTGGTGCTTaGCTGTCCTATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVHGVGA*LSYGAG
Trigger: ACCAGCACCATAGGACAGCCAAGCACCAACACCATG...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGCACCAAATCCAGTATTaGTCTGCCCAAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWHQIQY*SAQRDL
Trigger: CAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTG...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACACCAAATCCAGTATTaGTCTGCCCAAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEHQIQY*SAQRDL
Trigger: CAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCACAAATGAAGGTGCACTaGTTGTGCTGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAQMKVH*LCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTG...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCAAAGCTACTGGGGCCTaGGGGGCTCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRKATGA*GAPKPK
Trigger: TTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTGGCAGCAGAAGCATTTaGATCTGTCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLGSRSI*ICQSYW
Trigger: CCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCC...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCATGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRCKGVV*LAGGKG
Trigger: TCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTTGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDACKGVV*LAGGKG
Trigger: TCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCA...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCACATGGTATCCAAAACTaGCTCCTGGGTGATATCTAC +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAHGIQN*LLGDIY
Trigger: GTAGATATCACCCAGGAGCCAGTTTTGGATACCATG...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCACTTCAATCTGAGGTGTaGCAGTACAGGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSLQSEV*QYRIAS
Trigger: GCTGGCTATCCTGTACTGCCACACCTCAGATTGAAG...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGCGCAGTCTCTCATCCTaGATGAAGGAGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALRSLSS*MKESAW
Trigger: CCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCG...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCCGCAGTCTCTCATCCTaGATGAAGGAGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGRSLSS*MKESAW
Trigger: CCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCG...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGAGAAATGGAGGCTGTTaGTGGAAGCAAATACCAAAG +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWRNGGC*WKQIPK
Trigger: CTTTGGTATTTGCTTCCACCAACAGCCTCCATTTCT...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGCAGATACGAAGGAAGTaGGGAGCAGGCATATCTGTC +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRQIRRK*GAGISV
Trigger: GACAGATATGCCTGCTCCCCACTTCCTTCGTATCTG...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVGTRSF*VRKVSL
Trigger: TAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNTALAS*IHLAGT
Trigger: TGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGT...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGTGCTCGCACAGCTTTaGCCTCGTGGATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRVLAQL*PRGSIW
Trigger: CCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCAC...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGTGCTCGCACAGCTTTaGCCTCGTGGATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSVLAQL*PRGSIW
Trigger: CCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCAC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGGTGCTCGCACAGCTTTaGCCTCGTGGATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQVLAQL*PRGSIW
Trigger: CCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCAC...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKRMMSL*QRFQCS
Trigger: TGAGCACTGGAACCGCTGCCACAAGCTCATCATCCG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGATGATGAGCTTGTaGCAGCGGTTCCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQRMMSL*QRFQCS
Trigger: TGAGCACTGGAACCGCTGCCACAAGCTCATCATCCG...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTCCACCTGCTGTATATaGCGGAGCATTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVSTCCI*RSISMT
Trigger: AGTCATTGAAATGCTCCGCCATATACAGCAGGTGGA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATCCACCTGCTGTATATaGCGGAGCATTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGSTCCI*RSISMT
Trigger: AGTCATTGAAATGCTCCGCCATATACAGCAGGTGGA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCCACGCGCAGCAGGTTaGCTACACGTTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASPRAAG*LHVWPC
Trigger: ACATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTTGCGCAGTTCGTCCATaGCATAGTCCTCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDACAVRP*HSPQAW
Trigger: CCATGCCTGAGGACTATGCCATGGACGAACTGCGCA...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATGCGCAGTTCGTCCATaGCATAGTCCTCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRCAVRP*HSPQAW
Trigger: CCATGCCTGAGGACTATGCCATGGACGAACTGCGCA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCESVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAAATACCCTGGTTCTTTaGGGGATTCTGCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVANTLVL*GILPKE
Trigger: CTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATT...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGGAAGCTGGTTGGCATaGAGGGTCACAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVGSWLA*RVTRSR
Trigger: TCTGGATCTTGTGACCCTCCATGCCAACCAGCTTCC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCTCTGGAAGGGGTAGATaGAGGGTGGGAAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFASGRGR*RVGNAL
Trigger: CAAAGCATTTCCCACCCTCCATCTACCCCTTCCAGA...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATTAGGCAAGAGGATGTaGATGGGATATTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: KALNKWRMLLLAAGREGRLGKRM*MGYSLK
Trigger: CTTTAATGAATATCCCATCCACATCCTCTTGCCTAA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429801.5
3UTR CAA 72 bp ACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTaGTTTCAACGTGATTGCCAATGTTTGTACTCTTCA +
Preference number: 4 (lower is better)
Translates to: TDACKTSRPPLH*FQRDCQCLYSS
Trigger: TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
3UTR CAA 72 bp ATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAG +
Preference number: 4 (lower is better)
Translates to: MMASEAKCRMMS*WQRFQCSALNK
Trigger: CTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR TCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVRLVVC*FCWPKR
Trigger: TCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TCCTTCTTCTTAGGGTCTGACATCGGATTCCGGAAGAGAGGAGAGTCTCCAAAAACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SFFLGSDIGFRKRGESPKTGCTK*RCTGCA
Trigger: AGCACAACCAGTGCACCTTCATTTGGTACAACCAGT...TTTTGGAGACTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGSMLDY*CAAGEQ
Trigger: CTGTTCTCCAGCAGCACATCAATAGTCTAACATACT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCACTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSLLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTACCCATCAAAGAGATGTaGCTTGGCTGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVPIKEM*LGCACC
Trigger: ACAACAGGCACAGCCAAGTCACATCTCTTTGATGGG...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGCACTTTCTGGGGTTTaGGGAATAGGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNALSGV*GIGLAI
Trigger: TATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPIFLHS*YQQGDL
Trigger: CAGATCGCCTTGCTGATATCAACTATGAAGGAAGAT...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVIFLHS*YQQGDL
Trigger: CAGATCGCCTTGCTGATATCAACTATGAAGGAAGAT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGIFLHS*YQQGDL
Trigger: CAGATCGCCTTGCTGATATCAACTATGAAGGAAGAT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCCAGGCCGGTATTCTTTaGATTGAGCTCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGQAGIL*IELPVS
Trigger: GGAAACAGGGAGCTCAATTCAAAGAATACCGGCCTG...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATAAACTGGCTCCTGGGTaGTATCTACCATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNKLAPG*YLPCHC
Trigger: ACAGTGACATGGTAGATATCACCCAGGAGCCAGTTT...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATGCAGACACAGGTTCCTaGTCCTCAGGCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDADTGS*SSGMLS
Trigger: AGAGAGCATGCCTGAGGATCAGGAACCTGTGTCTGC...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAAGATGCAATATGTGTTaGGGCAGACACAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSRCNMC*GRHRFL
Trigger: CAGGAACCTGTGTCTGCCTCAACACATATTGCATCT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAAGATGCAATATGTGTTaGGGCAGACACAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAARCNMC*GRHRFL
Trigger: CAGGAACCTGTGTCTGCCTCAACACATATTGCATCT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTTCCCTTGCCATAGGTaGCAGACTTTTCACGAGGGA +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGFPCHR*QTFHEG
Trigger: TCCCTCGTGAAAAGTCTGTCACCTATGGCAAGGGAA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATTTCTAAGTGAACTTTaGATGGGGACTCAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGFLSEL*MGTQLG
Trigger: CCCTAACTGAGTCCCCATTCAAAGTTCACTTAGAAA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCTGAGTTTTTCTAAGTaGACTTTGAATGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCLSFSK*TLNGDS
Trigger: TGAGTCCCCATTCAAAGTTCACTTAGAAAAACTCAG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGAGCTCCAGAGGTGTCTaGTATAATTTCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGSSRGV*YNFMSS
Trigger: TGAAGACATGAAATTATATCAGACACCTCTGGAGCT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGCTGCATAGTCATGAATaGCAGCAACTCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRLHSHE*QQLPDW
Trigger: CCAATCTGGGAGTTGCTGTCATTCATGACTATGCAG...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCACTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVALRSRI*MYSRGS
Trigger: TGAACCCCGTGAATACATTCAAATTCTGGAGCGAAG...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFLRSRI*MYSRGS
Trigger: TGAACCCCGTGAATACATTCAAATTCTGGAGCGAAG...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGTCTCTCATCCTGGATaGAGGAGTCTGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSVSHPG*RSLLGA
Trigger: AGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGAC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAATATTTGCTTCTTTTCTaGGAGCTGCCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQYLLLF*ELPHRF
Trigger: AAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATA...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR TCA 90 bp CACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGGATGTTTCCCAATCCTaGATTAGGCTGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: HSPNRELVLRTGTEEKHKDVSQS*IRLLRS
Trigger: AGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATC...CTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGGATGTTTCCCAATCCTaGATTAGGCTGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWDVSQS*IRLLRS
Trigger: AGAGCGCAGCAGCCTAATTCAGGATTGGGAAACATC...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGCTCCAGGTCATTACCTaGGCAATCCACCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: HSPNRELVLRTGTEEKHKLQVIT*AIHLLY
Trigger: ATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAG...CTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCETVKSL*CVTAPG
Trigger: ACCTGGAGCAGTTACACATCAAAGTGACTTCACTGT...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTTGGCCATGTCTGACTaGGCCAGGCGATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSLAMSD*ARRSLA
Trigger: TGCTAAAGATCGCCTGGCTCAGTCAGACATGGCCAA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATTGGCCATGTCTGACTaGGCCAGGCGATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRLAMSD*ARRSLA
Trigger: TGCTAAAGATCGCCTGGCTCAGTCAGACATGGCCAA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAACTGAGGGTCTGGTGTTaGGTCGGAGGTTCTATCAGG +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQLRVWC*VGGSIR
Trigger: CCTGATAGAACCTCCGACTCAACACCAGACCCTCAG...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTCGCAAAGGGACTCGCTaGGGGTCTGGTGTTGAGTCG +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPRKGTR*GSGVES
Trigger: CGACTCAACACCAGACCCTCAGCGAGTCCCTTTGCG...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGAGTCTCAGCAAGACTaGAAACCAGGGACCAAACCA +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVESQQD*KPGTKP
Trigger: TGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTGTGGCCATATTGCCTaGGATAGCCCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSCGHIA*DSPNTS
Trigger: GCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGCACTTGTTTCAACGTaGTTGCCAATGTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVALVST*LPMFVL
Trigger: GAGTACAAACATTGGCAATCACGTTGAAACAAGTGC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTTTCTAAGTGAACTTTaGATGGGGACTCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVFLSEL*MGTQLG
Trigger: GCCTAACTGAGTCCCCATTCAAAGTTCACTTAGAAA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429801.5
CDS-3UTR GCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACGTTGCTAGAACCAAATaGAGATGTTCCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYVARTK*RCSKCP
Trigger: GGGGCATTTGGAACATCTGCATTTGGTTCTAGCAAC...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAACTGGTCCCTGTGCTTaGAGTTCCAAACAAGGTATT +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLTGPCA*SSKQGI
Trigger: AATACCTTGTTTGGAACTGCAAGCACAGGGACCAGT...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGCAGTAATACACTGGTaGTTGGTACTTATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLAVIHW*LVLMLV
Trigger: CACTAACATAAGTACCAAGCACCAGTGTATTACTGC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATGCCAGTTGTGGTACCTaGTCCCACCTGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDASCGT*SHLVLW
Trigger: CCACAGAACCAGGTGGGAGCAGGTACCACAACTGGC...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCATGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSCSCSK*CPSAGV
Trigger: AACACCAGCACTGGGACAGCATTTGGAACAGGAACA...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPECWRTA*WAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCA...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCGTTAGACTATTGATGTaGTGCTGGAGAACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAVRLLM*CWRTAC
Trigger: GCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAAC...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ATCCTGCACCAAGCCCAGTTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAAAAGAGCCTTCTGGGCTaGTGGATTTGTTGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ILHQAQFQESQVLVYFQKKSLLG*WICWFQ
Trigger: TTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTT...TTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCTTGGTGCAGGAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATCTAGTTTTAGACGGATaGTCCTCCTCCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHLVLDG*SSSSSS
Trigger: TGATGAAGAGGAGGAGGAGCATCCGTCTAAAACTAG...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCACCATTAAGAGCCATCTaGAAGGGCGTAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSPLRAI*KGVVWL
Trigger: AAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGG...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGCCTGATCCTCAGGCATaGTCTCTTCTAACATGGTAT +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKPDPQA*SLLTWY
Trigger: ATACCATGTTAGAAGAGAGCATGCCTGAGGATCAGG...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGGGACTAGGCCTAGTTaGCTACGTGTACCCACTGTT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSGTRPS*LRVPTV
Trigger: AACAGTGGGTACACGTAGGCAACTAGGCCTAGTCCC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTAAGGATCTGCTGTTATaGTTCGAGGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPKDLLL*FEAPAA
Trigger: AGCTGCTGGAGCCTCGAAGCATAACAGCAGATCCTT...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGGTAGTCCAAAGGATCTaGTGTTATGCTTCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRVVQRI*CYASRL
Trigger: GAGCCTCGAAGCATAACAGCAGATCCTTTGGACTAC...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR GCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACAGCCTTCTCACGTATaGCTGAGTTGTCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAQPSHV*LSCQCA
Trigger: TGCACATTGACAACTCAGGCATACGTGAGAAGGCTG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGTCAGATTCCATGTGTaGTCGCACAGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKVRFHV*SHSFGL
Trigger: GAGGCCAAAGCTGTGCGAGCACACATGGAATCTGAC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGTCAGATTCCATGTGTaGTCGCACAGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSVRFHV*SHSFGL
Trigger: GAGGCCAAAGCTGTGCGAGCACACATGGAATCTGAC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGTGGCAGCGGTTCCAGTaGTCAGCCTTAAATAAGCAA +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLWQRFQ*SALNKQ
Trigger: TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCA...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATGGCAGCGGTTCCAGTaGTCAGCCTTAAATAAGCAA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAWQRFQ*SALNKQ
Trigger: TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAAATCCTGAATTAGGCTaGTGCGCTCTGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPENPELG*CALEVP
Trigger: TGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGAATCCTGAATTAGGCTaGTGCGCTCTGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQNPELG*CALEVP
Trigger: TGGCACCTCCAGAGCGCAGCAGCCTAATTCAGGATT...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAAGGCCAACCCTCCTTTaGCTCCAAAATTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCERPTLL*LQNSVL
Trigger: TAACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCT...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGAAAGCGCGGTTCGGTaGGGAAGGGGAAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALESAVR*GRGSVR
Trigger: CCTGACACTTCCCCTTCCCCACCGAACCGCGCTTTC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAGTGGAGGTAGCTGGCTaGCTAAATGAACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSVEVAG*LNELVP
Trigger: TGGAACCAGTTCATTTAGCCAGCCAGCTACCTCCAC...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACGCAAAGGCATTGTTTTaGGATGAGAAGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYAKALF*DEKRLV
Trigger: GACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGC...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGATTGCCAAAGCCAGTTaGTTTATTTTGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGIAKAS*FILCKG
Trigger: GCCTTTGCACAAAATAAACCAACTGGCTTTGGCAAT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATTCCCACCTGGTTCTGTaGGCCCTTCCTGTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDSHLVL*ALPVSL
Trigger: CAGGCTAACAGGAAGGGCCCACAGAACCAGGTGGGA...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATCCCACCTGGTTCTGTaGGCCCTTCCTGTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQSHLVL*ALPVSL
Trigger: CAGGCTAACAGGAAGGGCCCACAGAACCAGGTGGGA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTCAAACAAGCCAGTTGTaGTACCTGCTCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAQTSQL*YLLPPG
Trigger: ACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTG...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACATGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTCAGSG*RRPKQA
Trigger: GGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCA...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGCCAAAGAGACCACCTaGATTTGTTCCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLAKETT*ICSKSS
Trigger: ACTGGATTTGGAACAAATCCAGGTGGTCTCTTTGGC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGCCAAAGAGACCACCTaGATTTGTTCCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNAKETT*ICSKSS
Trigger: ACTGGATTTGGAACAAATCCAGGTGGTCTCTTTGGC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNAVLWC*YYQRKS
Trigger: GCTTTTCCTTTGGTAATACCAGCACCATAGGACAGC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLAVLWC*YYQRKS
Trigger: GCTTTTCCTTTGGTAATACCAGCACCATAGGACAGC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAATAATCCCATGGTGTTaGTGCTTGGCTGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAIIPWC*CLAVLW
Trigger: CCATAGGACAGCCAAGCACCAACACCATGGGATTAT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCAAGAGCATAATCCCATGGTGTTaGTGCTTGGCTGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: SNLRLVVPKQRCLSSTKSIIPWC*CLAVLW
Trigger: CCATAGGACAGCCAAGCACCAACACCATGGGATTAT...GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACTCCAAATAATCCCATaGTGTTGGTGCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAALQIIP*CWCLAV
Trigger: GACAGCCAAGCACCAACACCATGGGATTATTTGGAG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCACCAGGCTGTGAGGCTTaGGTTACTCCAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSPGCEA*VTPNNP
Trigger: GGGATTATTTGGAGTAACCCAAGCCTCACAGCCTGG...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGTGTAGTAAGAGCCTTCTGGGCTGCTGGATTTGTTGGTTTCAATCTCTTCCTTCCAGGCTGTGAGGCTTaGGTTACTCCAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: GVVRAFWAAGFVGFNLFLPGCEA*VTPNNP
Trigger: GGGATTATTTGGAGTAACCCAAGCCTCACAGCCTGG...AAGGAAGAGATTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCACCAAATCCAGTATTaGTCTGCCCAAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLHQIQY*SAQRDL
Trigger: CAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTG...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCACAAATGAAGGTGCACTaGTTGTGCTGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVAQMKVH*LCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTG...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACAAATGAAGGTGCACTaGTTGTGCTGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEQMKVH*LCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACCAAATGAAGGTGCACTaGTTGTGCTGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNQMKVH*LCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTG...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTACAAATGAAGGTGCACTaGTTGTGCTGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLQMKVH*LCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTG...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGGGCAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 4 (lower is better)
Translates to: GRAGCQFIMSRCSKSLLGKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...GCCCAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCCCGCCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp TCTCACGTATGCCTGAGTTGTCAATGTGCAGGAGGACAAAGATGGCCCACTCCCAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 4 (lower is better)
Translates to: SHVCLSCQCAGGQRWPTPKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...GGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAGGCATACGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCCCTCCAATCTTAGGTTaGTTGTTCCCAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLPPILG*LFPNKD
Trigger: ATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGG...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCCTCCAATCTTAGGTTaGTTGTTCCCAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: DPGVAILPEIALTPAISCPPILG*LFPNKD
Trigger: ATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGCAGCAGAAGCATTTaGATCTGTCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAGSRSI*ICQSYW
Trigger: CCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCAAGAGCGTAGTAAGAGCCTTCTaGGCTGCTGGATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SNLRLVVPKQRCLSSTKSVVRAF*AAGFVG
Trigger: ACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTAC...GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGACAAAGAGATGTGACTTaGCTGTGCCTGTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGQRDVT*LCLLFV
Trigger: TACAAACAACAGGCACAGCCAAGTCACATCTCTTTG...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGCTCTGGCTCTGAGGTaGAGGTGCAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASALALR*RCRFAI
Trigger: AATGGCAAACCTGCACCTCCACCTCAGAGCCAGAGC...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATTCCAAAACTGGCTCCTaGGTGATATCTACCATGTCA +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHSKTGS*VISTMS
Trigger: TGACATGGTAGATATCACCCAGGAGCCAGTTTTGGA...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTACGAGTTTTCGACGAGTaGGATGCTGAAATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVRVFDE*DAEMGS
Trigger: ACTCCCCATTTCAGCATCCCACTCGTCGAAAACTCG...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGGAATCCAAACTCCATaGAATCGGCAATCTGATGAT +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAGIQTP*NRQSDD
Trigger: ATCATCAGATTGCCGATTCCATGGAGTTTGGATTCC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGGGGTTTAACAGCTACTaGATTGGGCAGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWGFNSY*IGQESK
Trigger: TTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCC...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAGGGTTTAACAGCTACTaGATTGGGCAGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEGFNSY*IGQESK
Trigger: TTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCC...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGTCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKSSSFR*PHRASH
Trigger: ATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGA...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHSKYQR*IARERF
Trigger: GAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAAATGGAGGCTGTTGGTaGAAGCAAATACCAAAGATG +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGNGGCW*KQIPKM
Trigger: CATCTTTGGTATTTGCTTCCACCAACAGCCTCCATT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAAATGGAGGCTGTTGGTaGAAGCAAATACCAAAGATG +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWANGGCW*KQIPKM
Trigger: CATCTTTGGTATTTGCTTCCACCAACAGCCTCCATT...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAGAAATGGAGGCTGTTaGTGGAAGCAAATACCAAAG +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGRNGGC*WKQIPK
Trigger: CTTTGGTATTTGCTTCCACCAACAGCCTCCATTTCT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAAGAAATGGAGGCTGTTaGTGGAAGCAAATACCAAAG +
Preference number: 4 (lower is better)
Translates to: IKKSPEQVEDAASGSREGRNGGC*WKQIPK
Trigger: CTTTGGTATTTGCTTCCACCAACAGCCTCCATTTCT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAGAAATGGAGGCTGTTaGTGGAAGCAAATACCAAAG +
Preference number: 4 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNRNGGC*WKQIPK
Trigger: CTTTGGTATTTGCTTCCACCAACAGCCTCCATTTCT...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTACAGATACGAAGGAAGTaGGGAGCAGGCATATCTGTC +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVQIRRK*GAGISV
Trigger: GACAGATATGCCTGCTCCCCACTTCCTTCGTATCTG...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTGCAGGAGGACAAAGATaGCCCACTCCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPAGGQR*PTPRAP
Trigger: AGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGC...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAGTRSF*VRKVSL
Trigger: TAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACC...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTCCTCGTGGATCCATTTaGCAGGTACACGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAPRGSI*QVHGAS
Trigger: AGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGG...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCCTCGTGGATCCATTTaGCAGGTACACGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKPRGSI*QVHGAS
Trigger: AGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCCTCGTGGATCCATTTaGCAGGTACACGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQPRGSI*QVHGAS
Trigger: AGAAGCTCCGTGTACCTGCCAAATGGATCCACGAGG...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGACAGCTTTGGCCTCGTaGATCCATTTGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALTALAS*IHLAGT
Trigger: TGTACCTGCCAAATGGATCCACGAGGCCAAAGCTGT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATGTGCTCGCACAGCTTTaGCCTCGTGGATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDVLAQL*PRGSIW
Trigger: CCAAATGGATCCACGAGGCCAAAGCTGTGCGAGCAC...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCAGGGAACCTCTGTGTaGTGTGAATGGGCATGTGAC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKQGTSV*CEWACD
Trigger: GTCACATGCCCATTCACACCACACAGAGGTTCCCTG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAAATACCCTGGTTCTTTaGGGGATTCTGCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSNTLVL*GILPKE
Trigger: CTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTCCCTCTTCCTTCTGTaGATAGTTCATCTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSSLFLL*IVHLLR
Trigger: CCTTAACAGATGAACTATCCACAGAAGGAAGAGGGA...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAGATGCGCAGTCTCTCATCCTGGATGAAGGAGTCTGCTTGGAGCTGATGCCAAAGGTATGGTGTTCATaGAACTCTAAAGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: KDAQSLILDEGVCLELMPKVWCS*NSKGRN
Trigger: GTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT...TGGCATCAGCTCCAAGCAGACTCCTTCATCCAGGATGAGAGACTGCGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CACACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAAAATTAGGCCCAGCTaGCAAGGATGGTGTGGACAG +
Preference number: 4 (lower is better)
Translates to: HTPQIESLFSEQVLRRNTKIRPS*QGWCGQ
Trigger: CTGTCCACACCATCCTTGCCAGCTGGGCCTAATTTT...TGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAATTCTGTCCAAATGTTaGAGTTGTGCCAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSILSKC*SCAKAT
Trigger: GGTGGCTTTGGCACAACTTCAACATTTGGACAGAAT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCAAGACCTCCAGGCTGTaGGGCTTGGGTTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRKTSRL*GLGYSK
Trigger: TTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPTGCTK*RCTGCA
Trigger: AGCACAACCAGTGCACCTTCATTTGGTACAACCAGT...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTGATGTGCTGCTGGAGAACACTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GESPKGEYVRLLMCCWRTLLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...TGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR TCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACCCATCAAAGAGATGTaGCTTGGCTGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRPIKEM*LGCACC
Trigger: ACAACAGGCACAGCCAAGTCACATCTCTTTGATGGG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACCCATCAAAGAGATGTaGCTTGGCTGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEPIKEM*LGCACC
Trigger: ACAACAGGCACAGCCAAGTCACATCTCTTTGATGGG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAASVILK*LIMKRR
Trigger: ACGTCTTTTCATGATGAGTCACTTCAGGATGACCGA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAGGCCGGTATTCTTTaGATTGAGCTCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEQAGIL*IELPVS
Trigger: GGAAACAGGGAGCTCAATTCAAAGAATACCGGCCTG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACAGGCCGGTATTCTTTaGATTGAGCTCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRQAGIL*IELPVS
Trigger: GGAAACAGGGAGCTCAATTCAAAGAATACCGGCCTG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAACTGGCTCCTGGGTaGTATCTACCATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALKLAPG*YLPCHC
Trigger: ACAGTGACATGGTAGATATCACCCAGGAGCCAGTTT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTGCTGTGTTTTAATTTaGGCTCCAGAGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWCCVLI*APEVSD
Trigger: ATCAGACACCTCTGGAGCTCAAATTAAAACACAGCA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCCAGATTGGGGACAATaGGAGGACACAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKPDWGQ*EDTVHP
Trigger: TGGATGAACTGTGTCCTCTCATTGTCCCCAATCTGG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCACTTCCTCTTCAATCTaGGGTGTGGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGTSSSI*GVAVQD
Trigger: ATCCTGTACTGCCACACCTCAGATTGAAGAGGAAGT...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGTCGAAGTGGTGTCTGTaGGTTTTGCTCCTCCGCTAT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKSKWCL*VLLLRY
Trigger: ATAGCGGAGGAGCAAAACTCACAGACACCACTTCGA...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATCGAAGTGGTGTCTGTaGGTTTTGCTCCTCCGCTAT +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPESKWCL*VLLLRY
Trigger: ATAGCGGAGGAGCAAAACTCACAGACACCACTTCGA...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGTCGAAGTGGTGTCTGTaGGTTTTGCTCCTCCGCTAT +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQSKWCL*VLLLRY
Trigger: ATAGCGGAGGAGCAAAACTCACAGACACCACTTCGA...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR TCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTCCAGCAGCTGGTTaGGATCATAATGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAAPAAG*DHNVCH
Trigger: GTGACAGACATTATGATCTCAACCAGCTGCTGGAGC...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGCTCCAGCAGCTGGTTaGGATCATAATGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRAPAAG*DHNVCH
Trigger: GTGACAGACATTATGATCTCAACCAGCTGCTGGAGC...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAACCTTCACACTGCGCTaGGAGATGGGTGTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPETFTLR*EMGVVK
Trigger: CTTAACTACACCCATCTCTCAGCGCAGTGTGAAGGT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTCTTCTCACGTATGCCTaGGTTGTCAATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDALLTYA*VVNVQE
Trigger: CTCCTGCACATTGACAACTCAGGCATACGTGAGAAG...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACTCCAGGTCATTACCTaGGCAATCCACCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPELQVIT*AIHLLY
Trigger: ATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCGTTCTATCAGGAGGATaGTGCAGACTCAGCACCACG +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLVLSGG*CRLSTT
Trigger: CGTGGTGCTGAGTCTGCATCATCCTCCTGATAGAAC...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCAGACATGTCACATGTaGCCAAGGGTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKQTCHM*PRVPAH
Trigger: ATGTGCAGGAACCCTTGGTCACATGTGACATGTCTG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTTGTGGCCATATTGCCTaGGATAGCCCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLCGHIA*DSPNTS
Trigger: GCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACA...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGTGCATGAACCCACATaGGCAAATCTTAAGTTAATC +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVVHEPT*ANLKLI
Trigger: GATTAACTTAAGATTTGCTCATGTGGGTTCATGCAC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTAGAATTTACTGTGCATaGACCCACATGAGCAAATCT +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVRIYCA*THMSKS
Trigger: AGATTTGCTCATGTGGGTTCATGCACAGTAAATTCT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSCRCSK*PSTSSA
Trigger: GGCACTACTAGTGGAGGGGCATTTGGAACATCTGCA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRCRCSK*PSTSSA
Trigger: GGCACTACTAGTGGAGGGGCATTTGGAACATCTGCA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCATCCCATGGTGTTGGTaGTTGGCTGTCCTATGGTGC +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRIPWCW*LAVLWC
Trigger: GCACCATAGGACAGCCAAGCACCAACACCATGGGAT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCATGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSCSCSK*CPSAGV
Trigger: AACACCAGCACTGGGACAGCATTTGGAACAGGAACA...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGTCCCACTGGTATTTGTaGCAAAACCAAAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKSHWYL*QNQRAR
Trigger: GCGGGCTCTTTGGTTTTGGCACAAATACCAGTGGGA...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000650171.1
CDS-3UTR GCA 90 bp AGTGGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGTCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SGRAGCQFIMSRCSKSLLSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...CAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCCCGCCCTGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGTTCCCAAACAAAGATaGCTGTCCAGCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKVPKQR*LSSTKS
Trigger: GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAAC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGATGTGACTTGGCTGTaGCTGTTGTTTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLDVTWL*LLFVKP
Trigger: AGGCTTTACAAACAACAGGCACAGCCAAGTCACATC...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTATCATCCACACTGTTaGTGTTGCTGTGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWYHPHC*CCCVYF
Trigger: GAAATAAACACAGCAACAGCAACAGTGTGGATGATA...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTAGTGAGAATAATACCTaGTGGGTGCATATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVSENNT*WVHMVR
Trigger: TCTTACCATATGCACCCAGCAGGTATTATTCTCACT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAGTGAGAATAATACCTaGTGGGTGCATATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGSENNT*WVHMVR
Trigger: TCTTACCATATGCACCCAGCAGGTATTATTCTCACT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCACTAGTTTTAGACGGATaGTCCTCCTCCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSLVLDG*SSSSSS
Trigger: TGATGAAGAGGAGGAGGAGCATCCGTCTAAAACTAG...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGGGCGTAGTCTGGCTTaGAGGAGGCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALGRSLA*RRQRSS
Trigger: ACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACCTGATCCTCAGGCATaGTCTCTTCTAACATGGTAT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAPDPQA*SLLTWY
Trigger: ATACCATGTTAGAAGAGAGCATGCCTGAGGATCAGG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCGGAGTACGACATTCTTaGACAGAGACACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAGVRHS*TETLGE
Trigger: TTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCC...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTTCTTTAACCCAATCTaGATAGTCATGAATGACAGC +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLFFNPI*IVMNDS
Trigger: GCTGTCATTCATGACTATGCAGATTGGGTTAAAGAA...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACATGTCAGGCTCCAGTaGTTCACAATTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAHVRLQ*FTICAS
Trigger: AGAAGCACAAATTGTGAAGCACTGGAGCCTGACATG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCCATGTCAGGCTCCAGTaGTTCACAATTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAHVRLQ*FTICAS
Trigger: AGAAGCACAAATTGTGAAGCACTGGAGCCTGACATG...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLLDEGV*LELMPV
Trigger: GACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAG...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGACTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRLDEGV*LELMPV
Trigger: GACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAG...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAACTGGATGAAGGAGTCTaGTTGGAGCTGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQLDEGV*LELMPV
Trigger: GACTGGCATCAGCTCCAAGCAGACTCCTTCATCCAG...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCCAACAGAGCAAAGATaGGCAGTCTCTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSPTEQR*AVSHPG
Trigger: TCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTGG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGGTGTCTGTGAGTTTTaGTCCTCCGCTATCACACAG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSGVCEF*SSAITQ
Trigger: CTGTGTGATAGCGGAGGAGCAAAACTCACAGACACC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTCCTGAGCAATCCACCTaGTGTATATGGCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAPEQST*CIWRSI
Trigger: AATGCTCCGCCATATACAGCAGGTGGATTGCTCAGG...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAG +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKTLMCN*SRSLPE
Trigger: CTCAGGTAATGACCTGGAGCAGTTACACATCAAAGT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAG +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCETLMCN*SRSLPE
Trigger: CTCAGGTAATGACCTGGAGCAGTTACACATCAAAGT...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAG +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWTLMCN*SRSLPE
Trigger: CTCAGGTAATGACCTGGAGCAGTTACACATCAAAGT...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTTCTTTGGGGGATTCTaGCAAAGGAGCTTTATTGAC +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWFFGGF*QRSFID
Trigger: GTCAATAAAGCTCCTTTGGCAGAATCCCCCAAAGAA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTATGGAGGGTGGGAAATaGTTTGGAGCTAACATGGGA +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPMEGGK*FGANMG
Trigger: TCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCAT...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACCTGAGAGGTAGAGGATaGTTTACAAAGAAATCCCGT +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNLRGRG*FTKKSR
Trigger: ACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTGAATGTATTCACGGGGTTCATTCATGTCAGGCTCCAGTaGTTCACAAGGTTTAACAGC +
Preference number: 4 (lower is better)
Translates to: AGESSSSLQNLNVFTGFIHVRLQ*FTRFNS
Trigger: GCTGTTAAACCTTGTGAAGCACTGGAGCCTGACATG...AATGAACCCCGTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR CCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGTGGAGGTAGCTGGCTaGCTAAATGAACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRVEVAG*LNELVP
Trigger: TGGAACCAGTTCATTTAGCCAGCCAGCTACCTCCAC...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGGGATGAGAAGAGACTaGTCCCTGTGCTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRGMRRD*SLCLQF
Trigger: GAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTATTGCCAAAGCCAGTTaGTTTATTTTGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVIAKAS*FILCKG
Trigger: GCCTTTGCACAAAATAAACCAACTGGCTTTGGCAAT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALSCKTT*PKEGAR
Trigger: TCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACGTACCTGCTCCCACCTaGTTCTGTGGGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNVPAPT*FCGPFL
Trigger: CAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTAC...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATGTACCTGCTCCCACCTaGTTCTGTGGGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNVPAPT*FCGPFL
Trigger: CAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTAC...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATTGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDCAGSG*RRPKQA
Trigger: GGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCA...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPECSLAK*FAEEAG
Trigger: ACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACA...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSWVVVA*PNGLLK
Trigger: CTTCAGCAAACCATTTGGCCAGGCTACAACCACCCA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAGAGAGGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTGATGTGCTGCTGGTGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KRGESPKGEYVRLLMCCWWVVVA*PNGLLK
Trigger: CTTCAGCAAACCATTTGGCCAGGCTACAACCACCCA...CCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCATGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSCLAVL*CWYYQR
Trigger: CCTTTGGTAATACCAGCACCATAGGACAGCCAAGCA...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCATGGTGTTGGTGCTTaGCTGTCCTATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASHGVGA*LSYGAG
Trigger: ACCAGCACCATAGGACAGCCAAGCACCAACACCATG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAATAATCCCATGGTGTTaGTGCTTGGCTGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSIIPWC*CLAVLW
Trigger: CCATAGGACAGCCAAGCACCAACACCATGGGATTAT...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGCCCAGTTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTCCAAATAATCCCATaGTGTTGGTGCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPVPRVPGAGLLPKILFPLQIIP*CWCLAV
Trigger: GACAGCCAAGCACCAACACCATGGGATTATTTGGAG...TGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCCAGGCTGTGAGGCTTaGGTTACTCCAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSPGCEA*VTPNNP
Trigger: GGGATTATTTGGAGTAACCCAAGCCTCACAGCCTGG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACCAGGCTGTGAGGCTTaGGTTACTCCAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRPGCEA*VTPNNP
Trigger: GGGATTATTTGGAGTAACCCAAGCCTCACAGCCTGG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAGCTACTGGGGCCTaGGGGGCTCCAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHKATGA*GAPKPK
Trigger: TTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTT...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAGGCAGCAGAAGCATTTaGATCTGTCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSGSRSI*ICQSYW
Trigger: CCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCC...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCGGCAGCAGAAGCATTTaGATCTGTCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGGSRSI*ICQSYW
Trigger: CCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCC...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTGGTATTTGTGCCAATGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: SQVLVYFQKYYSHWYLCQWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...TTGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCACAAAGAGATGTGACTTaGCTGTGCCTGTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVAQRDVT*LCLLFV
Trigger: TACAAACAACAGGCACAGCCAAGTCACATCTCTTTG...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTATTTCCAGCACTTTCTaGGGTTTGAGGAATAGGTTT +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVISSTF*GLRNRF
Trigger: AAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAAT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTGTTTAATGCAACAATaGTATCATCCACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGCLMQQ*YHPHCC
Trigger: GCAACAGTGTGGATGATACCATTGTTGCATTAAACA...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATTGCTCTCTTCTAACATaGTATCCAAAACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHCSLLT*YPKLAP
Trigger: AGGAGCCAGTTTTGGATACCATGTTAGAAGAGAGCA...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTCGAGTTTTCGACGAGTaGGATGCTGAAATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDARVFDE*DAEMGS
Trigger: ACTCCCCATTTCAGCATCCCACTCGTCGAAAACTCG...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCELKMLL*EYDILA
Trigger: TGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGACAGACCAAGAGGATGTaGATGGGATATTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGQTKRM*MGYSLK
Trigger: CTTTAATGAATATCCCATCCACATCCTCTTGGTCTG...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAGGAATCCAAACTCCATaGAATCGGCAATCTGATGAT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEGIQTP*NRQSDD
Trigger: ATCATCAGATTGCCGATTCCATGGAGTTTGGATTCC...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCACAGTTCATCCACATaGACAGTGCTGTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPHSSST*TVLCFN
Trigger: ATTAAAACACAGCACTGTCCATGTGGATGAACTGTG...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTTCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLSSSFR*PHRASH
Trigger: ATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGA...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGCGTTTCCAATCCAACTaGGAGCACACGTTTATTTGC +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRRFQSN*EHTFIC
Trigger: GCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACG...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTGCTGGCCAGCGTAACTaGCCTGTAGCACACCTTCAC +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPAGQRN*PVAHLH
Trigger: GTGAAGGTGTGCTACAGGCCAGTTACGCTGGCCAGC...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRGTRSF*VRKVSL
Trigger: TAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACC...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKKALNK*RMLLLA
Trigger: TGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGGAAAAAGAATACCCTaGTTCTTTGGGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSGKRIP*FFGGFC
Trigger: GCAGAATCCCCCAAAGAACCAGGGTATTCTTTTTCC...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGAAAAAGAATACCCTaGTTCTTTGGGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAGKRIP*FFGGFC
Trigger: GCAGAATCCCCCAAAGAACCAGGGTATTCTTTTTCC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAAGTAGGGAAGCTGGTTaGCATGGAGGGTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPESREAG*HGGSQD
Trigger: ATCTTGTGACCCTCCATGCCAACCAGCTTCCCTACT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTAAGGTATGGTGTTCATaGAACTCTAAAGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAKVWCS*NSKGRN
Trigger: GTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
3UTR CAA 72 bp AAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTaGCACTTGTTTCAACGTGATTGCCAATGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: KKTDACKTSRPP*HLFQRDCQCLY
Trigger: GTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLLLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCCTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLLLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAACCCATCAAAGAGATGTaGCTTGGCTGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQPIKEM*LGCACC
Trigger: ACAACAGGCACAGCCAAGTCACATCTCTTTGATGGG...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATGCTCTTCTTGGGCATaGATGCTCCATTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQCSSWA*MLHWLG
Trigger: CCCTAGCCAATGGAGCATTCATGCCCAAGAAGAGCA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGCACTTTCTGGGGTTTaGGGAATAGGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALALSGV*GIGLAI
Trigger: TATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLIFLHS*YQQGDL
Trigger: CAGATCGCCTTGCTGATATCAACTATGAAGGAAGAT...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACACAGGCCGGTATTCTTTaGATTGAGCTCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTQAGIL*IELPVS
Trigger: GGAAACAGGGAGCTCAATTCAAAGAATACCGGCCTG...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTAAACTGGCTCCTGGGTaGTATCTACCATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAKLAPG*YLPCHC
Trigger: ACAGTGACATGGTAGATATCACCCAGGAGCCAGTTT...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTGCAATGATGCTTTCATaGTCTGTAAGACATGTGGAT +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLAMMLS*SVRHVD
Trigger: ATCCACATGTCTTACAGATCATGAAAGCATCATTGC...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGCAATGATGCTTTCATaGTCTGTAAGACATGTGGAT +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLAMMLS*SVRHVD
Trigger: ATCCACATGTCTTACAGATCATGAAAGCATCATTGC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATTTCCCTTGCCATAGGTaGCAGACTTTTCACGAGGGA +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDFPCHR*QTFHEG
Trigger: TCCCTCGTGAAAAGTCTGTCACCTATGGCAAGGGAA...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATTTTCTAAGTGAACTTTaGATGGGGACTCAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNFLSEL*MGTQLG
Trigger: CCCTAACTGAGTCCCCATTCAAAGTTCACTTAGAAA...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCAGCTCCAGAGGTGTCTaGTATAATTTCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFSSRGV*YNFMSS
Trigger: TGAAGACATGAAATTATATCAGACACCTCTGGAGCT...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATGCTGTGTTTTAATTTaGGCTCCAGAGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAACCVLI*APEVSD
Trigger: ATCAGACACCTCTGGAGCTCAAATTAAAACACAGCA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGACCAGATTGGGGACAATaGGAGGACACAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRPDWGQ*EDTVHP
Trigger: TGGATGAACTGTGTCCTCTCATTGTCCCCAATCTGG...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCCAGATTGGGGACAATaGGAGGACACAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDPDWGQ*EDTVHP
Trigger: TGGATGAACTGTGTCCTCTCATTGTCCCCAATCTGG...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCTGCATAGTCATGAATaGCAGCAACTCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSLHSHE*QQLPDW
Trigger: CCAATCTGGGAGTTGCTGTCATTCATGACTATGCAG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTCTGCATAGTCATGAATaGCAGCAACTCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDALHSHE*QQLPDW
Trigger: CCAATCTGGGAGTTGCTGTCATTCATGACTATGCAG...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCCTTCGCTCCAGAATTTaGATGTATTCACGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGLRSRI*MYSRGS
Trigger: TGAACCCCGTGAATACATTCAAATTCTGGAGCGAAG...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAACTTCCTCTTCAATCTaGGGTGTGGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRTSSSI*GVAVQD
Trigger: ATCCTGTACTGCCACACCTCAGATTGAAGAGGAAGT...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGTATTTGCTTCTTTTCTaGGAGCTGCCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALYLLLF*ELPHRF
Trigger: AAACCGGTGTGGCAGCTCTCAGAAAAGAAGCAAATA...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGATCGAAGTGGTGTCTGTaGGTTTTGCTCCTCCGCTAT +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRSKWCL*VLLLRY
Trigger: ATAGCGGAGGAGCAAAACTCACAGACACCACTTCGA...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTACCTTCACACTGCGCTaGGAGATGGGTGTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLTFTLR*EMGVVK
Trigger: CTTAACTACACCCATCTCTCAGCGCAGTGTGAAGGT...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPTVKSL*CVTAPG
Trigger: ACCTGGAGCAGTTACACATCAAAGTGACTTCACTGT...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HSPNRELVLRTGTEEKHKTVKSL*CVTAPG
Trigger: ACCTGGAGCAGTTACACATCAAAGTGACTTCACTGT...CTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAAAGAAGAGCAAGACGATaGTCCCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQRRARR*SPVIPA
Trigger: AGCTGGGATTACAGGGGATCATCGTCTTGCTCTTCT...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCAAATGTTGAAGTTGTaGCAAAGCCACCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSQMLKL*QSHLCH
Trigger: GTGGCACAGGTGGCTTTGGCACAACTTCAACATTTG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGGTTGCTAGAACCAAATaGAGATGTTCCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWVARTK*RCSKCP
Trigger: GGGGCATTTGGAACATCTGCATTTGGTTCTAGCAAC...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAACTGGTCCCTGTGCTTaGAGTTCCAAACAAGGTATT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVTGPCA*SSKQGI
Trigger: AATACCTTGTTTGGAACTGCAAGCACAGGGACCAGT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTACTGGTTCCAAAATTaGCAAAGCCAGTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVYWFQN*QSQLVY
Trigger: ATAAACCAACTGGCTTTGGCAATTTTGGAACCAGTA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGCAGTAATACACTGGTaGTTGGTACTTATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RWRVGNALELTWDEQGGLAVIHW*LVLMLV
Trigger: CACTAACATAAGTACCAAGCACCAGTGTATTACTGC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGGCAGTAATACACTGGTaGTTGGTACTTATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ELLGKESLFSPRFRGLQQAVIHW*LVLMLV
Trigger: CACTAACATAAGTACCAAGCACCAGTGTATTACTGC...CTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTTCCTTACCCAGAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCATTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSLAVLW*WYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAA...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TCAATCTCTTCCTTCTTCTTAGGGTCTGACATCGGATTCCGGAAGAGAGGAGAGTTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SISSFFLGSDIGFRKRGELAVLW*WYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAA...CTCTCCTCTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAGGAAGAGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR GCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATATCCCATGGTGTTGGTaGTTGGCTGTCCTATGGTGC +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDIPWCW*LAVLWC
Trigger: GCACCATAGGACAGCCAAGCACCAACACCATGGGAT...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVNPVLV*PKRPVP
Trigger: AGGAACAGGTCTCTTTGGGCAGACCAATACTGGATT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALNPVLV*PKRPVP
Trigger: AGGAACAGGTCTCTTTGGGCAGACCAATACTGGATT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGTCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCATCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDCWRTA*WAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCA...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAGTTAGACTATTGATGTaGTGCTGGAGAACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEVRLLM*CWRTAC
Trigger: GCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAAC...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGAGCCTTCTGGGCTaGTGGATTTGTTGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSKSLLG*WICWFQ
Trigger: TTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTT...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCGATGTGACTTGGCTGTaGCTGTTGTTTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGDVTWL*LLFVKP
Trigger: AGGCTTTACAAACAACAGGCACAGCCAAGTCACATC...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTATCATCCACACTGTTaGTGTTGCTGTGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVYHPHC*CCCVYF
Trigger: GAAATAAACACAGCAACAGCAACAGTGTGGATGATA...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCACTAGTTTTAGACGGATaGTCCTCCTCCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSLVLDG*SSSSSS
Trigger: TGATGAAGAGGAGGAGGAGCATCCGTCTAAAACTAG...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGGGCGTAGTCTGGCTTaGAGGAGGCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTGRSLA*RRQRSS
Trigger: ACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCC...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCCATTAAGAGCCATCTaGAAGGGCGTAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASPLRAI*KGVVWL
Trigger: AAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGATGTTTCCCATTAAGAGCCATCTaGAAGGGCGTAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: AEHFNDSNIVQVNKPRCFPLRAI*KGVVWL
Trigger: AAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGG...GAAACATCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTACCTGATCCTCAGGCATaGTCTCTTCTAACATGGTAT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVPDPQA*SLLTWY
Trigger: ATACCATGTTAGAAGAGAGCATGCCTGAGGATCAGG...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGGAGTACGACATTCTTaGACAGAGACACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALGVRHS*TETLGE
Trigger: TTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATTCTTTAACCCAATCTaGATAGTCATGAATGACAGC +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAFFNPI*IVMNDS
Trigger: GCTGTCATTCATGACTATGCAGATTGGGTTAAAGAA...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGCATGTCAGGCTCCAGTaGTTCACAATTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALHVRLQ*FTICAS
Trigger: AGAAGCACAAATTGTGAAGCACTGGAGCCTGACATG...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCCAACAGAGCAAAGATaGGCAGTCTCTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASPTEQR*AVSHPG
Trigger: TCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTGG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCCAACAGAGCAAAGATaGGCAGTCTCTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLPTEQR*AVSHPG
Trigger: TCCAGGATGAGAGACTGCGCATCTTTGCTCTGTTGG...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGGTGTCTGTGAGTTTTaGTCCTCCGCTATCACACAG +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRGVCEF*SSAITQ
Trigger: CTGTGTGATAGCGGAGGAGCAAAACTCACAGACACC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCAAGGATCTGCTGTTATaGTTCGAGGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLKDLLL*FEAPAA
Trigger: AGCTGCTGGAGCCTCGAAGCATAACAGCAGATCCTT...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACAGCCTTCTCACGTATaGCTGAGTTGTCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRQPSHV*LSCQCA
Trigger: TGCACATTGACAACTCAGGCATACGTGAGAAGGCTG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCCTGAGCAATCCACCTaGTGTATATGGCGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLPEQST*CIWRSI
Trigger: AATGCTCCGCCATATACAGCAGGTGGATTGCTCAGG...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGTTCTTTGGGGGATTCTaGCAAAGGAGCTTTATTGAC +
Preference number: 4 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRFFGGF*QRSFID
Trigger: GTCAATAAAGCTCCTTTGGCAGAATCCCCCAAAGAA...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTGCCCAACTCCATGCCTaGCTCAGTCATGGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLAQLHA*LSHGLF
Trigger: AAACAAACCATGACTGAGGCAGGCATGGAGTTGGGC...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAAGCCCAACTCCATGCCTaGCTCAGTCATGGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQAQLHA*LSHGLF
Trigger: AAACAAACCATGACTGAGGCAGGCATGGAGTTGGGC...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTTTTACATTATCTTCATaGATAAAGACCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPFTLSS*IKTQVW
Trigger: CCACACCTGGGTCTTTATGCATGAAGATAATGTAAA...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACACCTCACGCCCTCCCTTaGACTTGTTTCAACGTGATT +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTPHALP*TCFNVI
Trigger: AATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGG...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGATTGCCAAAGCCAGTTaGTTTATTTTGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKIAKAS*FILCKG
Trigger: GCCTTTGCACAAAATAAACCAACTGGCTTTGGCAAT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCTCACGTATGCCTGAGTTGTCAATGTGCAGGAGGACAAAGATGGCCCACTCCCATAGCAGTAATACACTaGTGCTTGGTACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: SHVCLSCQCAGGQRWPTPIAVIH*CLVLML
Trigger: TAACATAAGTACCAAGCACCAGTGTATTACTGCTAT...GGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAGGCATACGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTAGAGTCCTGTTGCGCTaGAAGTGGCTGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPRVLLR*KWLEKT
Trigger: GGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCT...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGCCAAAGAGACCACCTaGATTTGTTCCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVAKETT*ICSKSS
Trigger: ACTGGATTTGGAACAAATCCAGGTGGTCTCTTTGGC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTTGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLCSLAK*FAEEAG
Trigger: ACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACA...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALAVLWC*YYQRKS
Trigger: GCTTTTCCTTTGGTAATACCAGCACCATAGGACAGC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTGATGTGCTGCTGGAGAACATGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: GESPKGEYVRLLMCCWRTCLAVL*CWYYQR
Trigger: CCTTTGGTAATACCAGCACCATAGGACAGCCAAGCA...TGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATCATGGTGTTGGTGCTTaGCTGTCCTATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDHGVGA*LSYGAG
Trigger: ACCAGCACCATAGGACAGCCAAGCACCAACACCATG...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACACCAAATCCAGTATTaGTCTGCCCAAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEHQIQY*SAQRDL
Trigger: CAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCAAATACTATTCCCACTaGTATTTGTGCCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: QPTQRMANSANPNKAGNLKYYSH*YLCQNQ
Trigger: TTGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAGAGAGGAGAGTCTCCAAAAGGTGAGTATGTTAGACTATTGATGTGCTGCTGGGGCAGCAGAAGCATTTaGATCTGTCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: KRGESPKGEYVRLLMCCWGSRSI*ICQSYW
Trigger: CCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCC...CCAGCAGCACATCAATAGTCTAACATACTCACCTTTTGGAGACTCTCCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGATGTTTAATGCAACAATaGTATCATCCACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGCLMQQ*YHPHCC
Trigger: GCAACAGTGTGGATGATACCATTGTTGCATTAAACA...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGAGAATAATACCTGCTaGGTGCATATGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVENNTC*VHMVRI
Trigger: AATTCTTACCATATGCACCCAGCAGGTATTATTCTC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAGATGTTTTATCTGTTaGCCAAACTCCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGRCFIC*PNSIQC
Trigger: ACATTGGATGGAGTTTGGCCAACAGATAAAACATCT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCCCATACTTAGAAAAATaGGAGACCTTAAACACCCAA +
Preference number: 4 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSPYLEK*ETLNTQ
Trigger: TTGGGTGTTTAAGGTCTCCCATTTTTCTAAGTATGG...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCACCATACTTAGAAAAATaGGAGACCTTAAACACCCAA +
Preference number: 4 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAPYLEK*ETLNTQ
Trigger: TTGGGTGTTTAAGGTCTCCCATTTTTCTAAGTATGG...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCTCCAAAACTGGCTCCTaGGTGATATCTACCATGTCA +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGSKTGS*VISTMS
Trigger: TGACATGGTAGATATCACCCAGGAGCCAGTTTTGGA...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCTGCTCTCTTCTAACATaGTATCCAAAACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFACSLLT*YPKLAP
Trigger: AGGAGCCAGTTTTGGATACCATGTTAGAAGAGAGCA...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGACGAGTTTTCGACGAGTaGGATGCTGAAATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRRVFDE*DAEMGS
Trigger: ACTCCCCATTTCAGCATCCCACTCGTCGAAAACTCG...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCTTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFALKMLL*EYDILA
Trigger: TGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAA...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACCAGACCAAGAGGATGTaGATGGGATATTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: GVAILPEIALTPAISCHYQTKRM*MGYSLK
Trigger: CTTTAATGAATATCCCATCCACATCCTCTTGGTCTG...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGAATCCAAACTCCATaGAATCGGCAATCTGATGAT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAGIQTP*NRQSDD
Trigger: ATCATCAGATTGCCGATTCCATGGAGTTTGGATTCC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALSKYQR*IARERF
Trigger: GAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGAATGGAGGCTGTTGGTaGAAGCAAATACCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRNGGCW*KQIPKM
Trigger: CATCTTTGGTATTTGCTTCCACCAACAGCCTCCATT...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALGTRSF*VRKVSL
Trigger: TAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWGTRSF*VRKVSL
Trigger: TAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACC...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTTGCGCAGTTCGTCCATaGCATAGTCCTCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPCAVRP*HSPQAW
Trigger: CCATGCCTGAGGACTATGCCATGGACGAACTGCGCA...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAATACCCTGGTTCTTTaGGGGATTCTGCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSNTLVL*GILPKE
Trigger: CTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTGGAAAAAGAATACCCTaGTTCTTTGGGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPGKRIP*FFGGFC
Trigger: GCAGAATCCCCCAAAGAACCAGGGTATTCTTTTTCC...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGTCCCTCTTCCTTCTGTaGATAGTTCATCTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRSLFLL*IVHLLR
Trigger: CCTTAACAGATGAACTATCCACAGAAGGAAGAGGGA...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAAAGGTATGGTGTTCATaGAACTCTAAAGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSKVWCS*NSKGRN
Trigger: GTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGCTTTGGAGCTAACATaGGATGAACAGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSALELT*DEQGGL
Trigger: TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTTCTGGAAGGGGTAGATaGAGGGTGGGAAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLSGRGR*RVGNAL
Trigger: CAAAGCATTTCCCACCCTCCATCTACCCCTTCCAGA...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCGACCCTGTTATTCATTaGGCAACGCGTCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFADPVIH*ATRLLK
Trigger: TTTCAAAAGACGCGTTGCCCAATGAATAACAGGGTC...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR CCA 90 bp AGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGGGCTGCAAATACTATTCCCACTaGTATTTGTGCCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: RAGCQFIMSRCSKSLLGCKYYSH*YLCQNL
Trigger: CAGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...GCAGCCCAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCCCGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
3UTR CAA 72 bp ATTATCTTCATGCATAAAGACCCAGGTGTGGCCATATaGCCTGAGATAGCCCTAACACCAGCTATCTCATGC +
Preference number: 4 (lower is better)
Translates to: IIFMHKDPGVAI*PEIALTPAISC
Trigger: GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTCTTTATGCATGAAGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAATTCTGTCCAAATGTTaGAGTTGTGCCAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEILSKC*SCAKAT
Trigger: GGTGGCTTTGGCACAACTTCAACATTTGGACAGAAT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQRLVVC*FCWPKR
Trigger: TCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAAGACCTCCAGGCTGTaGGGCTTGGGTTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALKTSRL*GLGYSK
Trigger: TTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLTGCTK*RCTGCA
Trigger: AGCACAACCAGTGCACCTTCATTTGGTACAACCAGT...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGSMLDY*CAAGEQ
Trigger: CTGTTCTCCAGCAGCACATCAATAGTCTAACATACT...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALSMLDY*CAAGEQ
Trigger: CTGTTCTCCAGCAGCACATCAATAGTCTAACATACT...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSSMLDY*CAAGEQ
Trigger: CTGTTCTCCAGCAGCACATCAATAGTCTAACATACT...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTTCTCCATCCTGCTGGTaGTTCTCATCAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASSPSCW*FSSTGL
Trigger: CAAACCTGTTGATGAGAATCACCAGCAGGATGGAGA...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACATCTCCATCCTGCTGGTaGTTCTCATCAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTSPSCW*FSSTGL
Trigger: CAAACCTGTTGATGAGAATCACCAGCAGGATGGAGA...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAATCTCCATCCTGCTGGTaGTTCTCATCAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQSPSCW*FSSTGL
Trigger: CAAACCTGTTGATGAGAATCACCAGCAGGATGGAGA...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGTCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKSVILK*LIMKRR
Trigger: ACGTCTTTTCATGATGAGTCACTTCAGGATGACCGA...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLSSLFP*NCFQSS
Trigger: GGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCT...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCGCAATGATGCTTTCATaGTCTGTAAGACATGTGGAT +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAAMMLS*SVRHVD
Trigger: ATCCACATGTCTTACAGATCATGAAAGCATCATTGC...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGAGAACAGATTTCTTaGGAAGTATCTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAGEQIS*EVSALE
Trigger: TTCCAAAGCAGATACTTCTCAAGAAATCTGTTCTCC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTTCTAAGTGAACTTTaGATGGGGACTCAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVFLSEL*MGTQLG
Trigger: CCCTAACTGAGTCCCCATTCAAAGTTCACTTAGAAA...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACTGAGTTTTTCTAAGTaGACTTTGAATGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAALSFSK*TLNGDS
Trigger: TGAGTCCCCATTCAAAGTTCACTTAGAAAAACTCAG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGCTGAGTTTTTCTAAGTaGACTTTGAATGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRLSFSK*TLNGDS
Trigger: TGAGTCCCCATTCAAAGTTCACTTAGAAAAACTCAG...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCAGCTCCAGAGGTGTCTaGTATAATTTCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFASSRGV*YNFMSS
Trigger: TGAAGACATGAAATTATATCAGACACCTCTGGAGCT...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTTGCTGTGTTTTAATTTaGGCTCCAGAGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPCCVLI*APEVSD
Trigger: ATCAGACACCTCTGGAGCTCAAATTAAAACACAGCA...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKTVKSL*CVTAPG
Trigger: ACCTGGAGCAGTTACACATCAAAGTGACTTCACTGT...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACACAAATGTTGAAGTTGTaGCAAAGCCACCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTQMLKL*QSHLCH
Trigger: GTGGCACAGGTGGCTTTGGCACAACTTCAACATTTG...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGTTGCTAGAACCAAATaGAGATGTTCCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKVARTK*RCSKCP
Trigger: GGGGCATTTGGAACATCTGCATTTGGTTCTAGCAAC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGACTGGTCCCTGTGCTTaGAGTTCCAAACAAGGTATT +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQTGPCA*SSKQGI
Trigger: AATACCTTGTTTGGAACTGCAAGCACAGGGACCAGT...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAAGAGACTGGTCCCTGTaGTTGCAGTTCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQRDWSL*LQFQTR
Trigger: CCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTTACTGGTTCCAAAATTaGCAAAGCCAGTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAYWFQN*QSQLVY
Trigger: ATAAACCAACTGGCTTTGGCAATTTTGGAACCAGTA...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTTTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPLAVLW*WYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAA...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTATCCCATGGTGTTGGTaGTTGGCTGTCCTATGGTGC +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPIPWCW*LAVLWC
Trigger: GCACCATAGGACAGCCAAGCACCAACACCATGGGAT...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSNPVLV*PKRPVP
Trigger: AGGAACAGGTCTCTTTGGGCAGACCAATACTGGATT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGTTCCCAAACAAAGATaGCTGTCCAGCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQVPKQR*LSSTKS
Trigger: GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAAC...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGTTAGACTATTGATGTaGTGCTGGAGAACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRVRLLM*CWRTAC
Trigger: GCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAAC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAGAGCCTTCTGGGCTaGTGGATTTGTTGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKKSLLG*WICWFQ
Trigger: TTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTT...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGATGTGACTTGGCTGTaGCTGTTGTTTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKDVTWL*LLFVKP
Trigger: AGGCTTTACAAACAACAGGCACAGCCAAGTCACATC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAAGTGAGAATAATACCTaGTGGGTGCATATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAASENNT*WVHMVR
Trigger: TCTTACCATATGCACCCAGCAGGTATTATTCTCACT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTTCTTTCCTCCGGATATaGACAATATCATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPSFLRI*TISSKF
Trigger: AAATTTGGATGATATTGTGCATATCCGGAGGAAAGA...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCTAGTTTTAGACGGATaGTCCTCCTCCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKLVLDG*SSSSSS
Trigger: TGATGAAGAGGAGGAGGAGCATCCGTCTAAAACTAG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACCTGATCCTCAGGCATaGTCTCTTCTAACATGGTAT +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEPDPQA*SLLTWY
Trigger: ATACCATGTTAGAAGAGAGCATGCCTGAGGATCAGG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGGAGTACGACATTCTTaGACAGAGACACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKGVRHS*TETLGE
Trigger: TTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTTCTTTAACCCAATCTaGATAGTCATGAATGACAGC +
Preference number: 4 (lower is better)
Translates to: AGTKTALKINPSVTGIHFFFNPI*IVMNDS
Trigger: GCTGTCATTCATGACTATGCAGATTGGGTTAAAGAA...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCATGTCAGGCTCCAGTaGTTCACAATTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSHVRLQ*FTICAS
Trigger: AGAAGCACAAATTGTGAAGCACTGGAGCCTGACATG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCAGCCTTCTCACGTATaGCTGAGTTGTCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLQPSHV*LSCQCA
Trigger: TGCACATTGACAACTCAGGCATACGTGAGAAGGCTG...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAATGGCAGCGGTTCCAGTaGTCAGCCTTAAATAAGCAA +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQWQRFQ*SALNKQ
Trigger: TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCA...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGAGGCCAACCCTCCTTTaGCTCCAAAATTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQRPTLL*LQNSVL
Trigger: TAACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCT...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATCCTCACGCCCTCCCTTaGACTTGTTTCAACGTGATT +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDPHALP*TCFNVI
Trigger: AATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGG...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAAAAAGACAGATGCCTaGAAGACCTCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALKKTDA*KTSRPP
Trigger: GGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAGGCAGAATTTACTGTaGATGAACCCACATGAGCAA +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSRQNLL*MNPHEQ
Trigger: TTGCTCATGTGGGTTCATGCACAGTAAATTCTGCCT...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTAATGATACAAGTAATTaGGATAAACAATGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVNDTSN*DKQCRP
Trigger: GGGCCTACATTGTTTATCGCAATTACTTGTATCATT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGCAAAGGCATTGTTTTaGGATGAGAAGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKAKALF*DEKRLV
Trigger: GACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLSCKTT*PKEGAR
Trigger: TCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCT...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCAAACAAGCCAGTTGTaGTACCTGCTCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHQTSQL*YLLPPG
Trigger: ACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGCCAAAGAGACCACCTaGATTTGTTCCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSAKETT*ICSKSS
Trigger: ACTGGATTTGGAACAAATCCAGGTGGTCTCTTTGGC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATTGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDCSLAK*FAEEAG
Trigger: ACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACA...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCTGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRCLAVL*CWYYQR
Trigger: CCTTTGGTAATACCAGCACCATAGGACAGCCAAGCA...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATATAATCCCATGGTGTTaGTGCTTGGCTGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDIIPWC*CLAVLW
Trigger: CCATAGGACAGCCAAGCACCAACACCATGGGATTAT...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCATAATCCCATGGTGTTaGTGCTTGGCTGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRIIPWC*CLAVLW
Trigger: CCATAGGACAGCCAAGCACCAACACCATGGGATTAT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGACTCCAAATAATCCCATaGTGTTGGTGCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRLQIIP*CWCLAV
Trigger: GACAGCCAAGCACCAACACCATGGGATTATTTGGAG...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTAAATACTATTCCCACTaGTATTTGTGCCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: TANPENGKQCQSKQGREPKYYSH*YLCQNQ
Trigger: TTGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTAAATACTATTCCCACTaGTATTTGTGCCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: PARPHALPCTCFNVIANVKYYSH*YLCQNQ
Trigger: TTGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCCCTCCAATCTTAGGTTaGTTGTTCCCAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAPPILG*LFPNKD
Trigger: ATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGG...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGTAGTAAGAGCCTTCTaGGCTGCTGGATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRVVRAF*AAGFVG
Trigger: ACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTAC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGTAGTAAGAGCCTTCTaGGCTGCTGGATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASVVRAF*AAGFVG
Trigger: ACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTAC...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAGTAGTAAGAGCCTTCTaGGCTGCTGGATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTVVRAF*AAGFVG
Trigger: ACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTAC...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTGTAGTAAGAGCCTTCTaGGCTGCTGGATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLVVRAF*AAGFVG
Trigger: ACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTAC...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAATTTCCAGCACTTTCTaGGGTTTGAGGAATAGGTTT +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAISSTF*GLRNRF
Trigger: AAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAAT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGATTTCCAGCACTTTCTaGGGTTTGAGGAATAGGTTT +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLISSTF*GLRNRF
Trigger: AAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAAT...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACTGTTTAATGCAACAATaGTATCATCCACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNCLMQQ*YHPHCC
Trigger: GCAACAGTGTGGATGATACCATTGTTGCATTAAACA...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGGAGAATAATACCTGCTaGGTGCATATGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWENNTC*VHMVRI
Trigger: AATTCTTACCATATGCACCCAGCAGGTATTATTCTC...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAAGATGTTTTATCTGTTaGCCAAACTCCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCERCFIC*PNSIQC
Trigger: ACATTGGATGGAGTTTGGCCAACAGATAAAACATCT...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGAGATGTTTTATCTGTTaGCCAAACTCCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKRCFIC*PNSIQC
Trigger: ACATTGGATGGAGTTTGGCCAACAGATAAAACATCT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAACCATACTTAGAAAAATaGGAGACCTTAAACACCCAA +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEPYLEK*ETLNTQ
Trigger: TTGGGTGTTTAAGGTCTCCCATTTTTCTAAGTATGG...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACATGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTCKGVV*LAGGKG
Trigger: TCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCA...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATTGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNCKGVV*LAGGKG
Trigger: TCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCA...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTCCAAAACTGGCTCCTaGGTGATATCTACCATGTCA +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSSKTGS*VISTMS
Trigger: TGACATGGTAGATATCACCCAGGAGCCAGTTTTGGA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGGGTTTAACAGCTACTaGATTGGGCAGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKGFNSY*IGQESK
Trigger: TTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCGTTTCCAATCCAACTaGGAGCACACGTTTATTTGC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSRFQSN*EHTFIC
Trigger: GCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTCGTTTCCAATCCAACTaGGAGCACACGTTTATTTGC +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDARFQSN*EHTFIC
Trigger: GCAAATAAACGTGTGCTCCCAGTTGGATTGGAAACG...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPESKYQR*IARERF
Trigger: GAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGCAAATACCAAAGATaGATAGCCAGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSSKYQR*IARERF
Trigger: GAAACGCTCCCTGGCTATCCATCTTTGGTATTTGCT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGGTACACGGAGCTTCTaGGTAAGGAAAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAGTRSF*VRKVSL
Trigger: TAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACC...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGTCCACCTGCTGTATATaGCGGAGCATTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKSTCCI*RSISMT
Trigger: AGTCATTGAAATGCTCCGCCATATACAGCAGGTGGA...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGATCTGTGTGGTGTGAATaGGCATGTGACTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRSVWCE*ACDCDA
Trigger: TGCATCACAGTCACATGCCCATTCACACCACACAGA...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAGGAAAAAGAATACCCTaGTTCTTTGGGGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEGKRIP*FFGGFC
Trigger: GCAGAATCCCCCAAAGAACCAGGGTATTCTTTTTCC...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGTCCCTCTTCCTTCTGTaGATAGTTCATCTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALSLFLL*IVHLLR
Trigger: CCTTAACAGATGAACTATCCACAGAAGGAAGAGGGA...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGGTAGTAGCAAAGGTATaGTGTTCATGGAACTCTAAA +
Preference number: 4 (lower is better)
Translates to: KTALKINPSVTGIHFCPKVVAKV*CSWNSK
Trigger: TTTAGAGTTCCATGAACACCATACCTTTGCTACTAC...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACATTTCTCTACCTGAGGTaGAGGTGCAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTFLYLR*RCRFAI
Trigger: AATGGCAAACCTGCACCTCCACCTCAGGTAGAGAAA...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGCCCAGTTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCAGGCTGCTGGATTTGTTaGTTTCAATCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPVPRVPGAGLLPKILFPGCWIC*FQSLPS
Trigger: AGAAGGAAGAGATTGAAACCAACAAATCCAGCAGCC...TGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTGAATGTATTCACGGGGTTCATTAGGTTTAACAGCTACTaGATTGGGCAGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: AGESSSSLQNLNVFTGFIRFNSY*IGQESK
Trigger: TTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCT...AATGAACCCCGTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
3UTR CAA 72 bp GAATGGCTAGGGATGGAAAAAGAATACCCTGGTTCTTaGGGGGATTCTGCCAAAGGAGCTTTATTGACCATT +
Preference number: 4 (lower is better)
Translates to: EWLGMEKEYPGS*GDSAKGALLTI
Trigger: AATGGTCAATAAAGCTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTCTTTTTCCATCCCTAGCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAATTCTGTCCAAATGTTaGAGTTGTGCCAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTILSKC*SCAKAT
Trigger: GGTGGCTTTGGCACAACTTCAACATTTGGACAGAAT...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATCCTGGTTTAGTCTGTaGATTTCCAAAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQSWFSL*ISKEAS
Trigger: GGAGGCCTCTTTGGAAATTCACAGACTAAACCAGGA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATAGCTGGCTGGCTAAATaGACTGGTTCCAAACAATCC +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDSWLAK*TGSKQS
Trigger: GGATTGTTTGGAACCAGTTCATTTAGCCAGCCAGCT...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAAGCTGGCTGGCTAAATaGACTGGTTCCAAACAATCC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQSWLAK*TGSKQS
Trigger: GGATTGTTTGGAACCAGTTCATTTAGCCAGCCAGCT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACCATATGCAAAGCCTaGATTAGTGGTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDTICKA*ISGGGA
Trigger: AGCTCCTCCACCACTAATTCAGGCTTTGCATATGGT...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSKAVLF*PYAKPE
Trigger: TTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRKAVLF*PYAKPE
Trigger: TTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTT...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKKAVLF*PYAKPE
Trigger: TTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTT...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALRLVVC*FCWPKR
Trigger: TCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQTGCTK*RCTGCA
Trigger: AGCACAACCAGTGCACCTTCATTTGGTACAACCAGT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp TATATGGCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGAACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: YMAEHFNDSNIVQVNKPRTGCTK*RCTGCA
Trigger: AGCACAACCAGTGCACCTTCATTTGGTACAACCAGT...TCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSSMLDY*CAAGEQ
Trigger: CTGTTCTCCAGCAGCACATCAATAGTCTAACATACT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATTCTCCATCCTGCTGGTaGTTCTCATCAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDSPSCW*FSSTGL
Trigger: CAAACCTGTTGATGAGAATCACCAGCAGGATGGAGA...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGCACTTTCTGGGGTTTaGGGAATAGGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRALSGV*GIGLAI
Trigger: TATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGCACTTTCTGGGGTTTaGGGAATAGGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASALSGV*GIGLAI
Trigger: TATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGC...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAGCACTTTCTGGGGTTTaGGGAATAGGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTALSGV*GIGLAI
Trigger: TATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGC...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCTCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRSVILK*LIMKRR
Trigger: ACGTCTTTTCATGATGAGTCACTTCAGGATGACCGA...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATTCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDSVILK*LIMKRR
Trigger: ACGTCTTTTCATGATGAGTCACTTCAGGATGACCGA...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCAGGCCGGTATTCTTTaGATTGAGCTCCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHQAGIL*IELPVS
Trigger: GGAAACAGGGAGCTCAATTCAAAGAATACCGGCCTG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGGGAGAACAGATTTCTTaGGAAGTATCTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWGEQIS*EVSALE
Trigger: TTCCAAAGCAGATACTTCTCAAGAAATCTGTTCTCC...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTTCGAAGTGGTGTCTGTaGGTTTTGCTCCTCCGCTAT +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPSKWCL*VLLLRY
Trigger: ATAGCGGAGGAGCAAAACTCACAGACACCACTTCGA...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAACAAATGTTGAAGTTGTaGCAAAGCCACCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQQMLKL*QSHLCH
Trigger: GTGGCACAGGTGGCTTTGGCACAACTTCAACATTTG...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATTGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHCRCSK*PSTSSA
Trigger: GGCACTACTAGTGGAGGGGCATTTGGAACATCTGCA...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGTTGCTAGAACCAAATaGAGATGTTCCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRVARTK*RCSKCP
Trigger: GGGGCATTTGGAACATCTGCATTTGGTTCTAGCAAC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRLAVLW*WYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGTCCCACTGGTATTTGTaGCAAAACCAAAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALSHWYL*QNQRAR
Trigger: GCGGGCTCTTTGGTTTTGGCACAAATACCAGTGGGA...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397004.8
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGTCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAGCTGTTCCAAATCCTaGACCAAGCCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHSCSKS*TKPSSK
Trigger: CTTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCT...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNCWRTA*WAAEAF
Trigger: AAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCA...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAGACTATTGATGTGCTaGTGGAGAACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALRLLMC*WRTACW
Trigger: CCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAGATGTGACTTGGCTGTaGCTGTTGTTTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTDVTWL*LLFVKP
Trigger: AGGCTTTACAAACAACAGGCACAGCCAAGTCACATC...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATCTTTCCTCCGGATATaGACAATATCATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCESFLRI*TISSKF
Trigger: AAATTTGGATGATATTGTGCATATCCGGAGGAAAGA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGATGTTTCGGAGTACGACATTCTTaGACAGAGACACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: AEHFNDSNIVQVNKPRCFGVRHS*TETLGE
Trigger: TTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCC...GAAACATCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGTTCTTTAACCCAATCTaGATAGTCATGAATGACAGC +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLFFNPI*IVMNDS
Trigger: GCTGTCATTCATGACTATGCAGATTGGGTTAAAGAA...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCATGTCAGGCTCCAGTaGTTCACAATTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASHVRLQ*FTICAS
Trigger: AGAAGCACAAATTGTGAAGCACTGGAGCCTGACATG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAG +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDATLMCN*SRSLPE
Trigger: CTCAGGTAATGACCTGGAGCAGTTACACATCAAAGT...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp GAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGAGAGACTACATGGAAACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAG +
Preference number: 4 (lower is better)
Translates to: ELVLRTGTEEKHKRDYMETLMCN*SRSLPE
Trigger: CTCAGGTAATGACCTGGAGCAGTTACACATCAAAGT...TTCCATGTAGTCTCTCTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR GCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTTTCTTTGGGGGATTCTaGCAAAGGAGCTTTATTGAC +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAFFGGF*QRSFID
Trigger: GTCAATAAAGCTCCTTTGGCAGAATCCCCCAAAGAA...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGGCCAACCCTCCTTTaGCTCCAAAATTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRRPTLL*LQNSVL
Trigger: TAACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCT...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAAAAAAGACAGATGCCTaGAAGACCTCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTKKTDA*KTSRPP
Trigger: GGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTT...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATGTGGAGGTAGCTGGCTaGCTAAATGAACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHVEVAG*LNELVP
Trigger: TGGAACCAGTTCATTTAGCCAGCCAGCTACCTCCAC...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGCAAAGGCATTGTTTTaGGATGAGAAGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRAKALF*DEKRLV
Trigger: GACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAGCAAAGGCATTGTTTTaGGATGAGAAGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTAKALF*DEKRLV
Trigger: GACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGC...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDSCKTT*PKEGAR
Trigger: TCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCT...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACATAGCAGTAATACACTaGTGCTTGGTACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNIAVIH*CLVLML
Trigger: TAACATAAGTACCAAGCACCAGTGTATTACTGCTAT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACACAAACAAGCCAGTTGTaGTACCTGCTCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTQTSQL*YLLPPG
Trigger: ACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTG...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGTGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALCSLAK*FAEEAG
Trigger: ACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACA...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRAVLWC*YYQRKS
Trigger: GCTTTTCCTTTGGTAATACCAGCACCATAGGACAGC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATCTCCAAATAATCCCATaGTGTTGGTGCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDLQIIP*CWCLAV
Trigger: GACAGCCAAGCACCAACACCATGGGATTATTTGGAG...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTGGTATTTGTGCCAACAAATGAAGGTGCACTaGTTGTGCTGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SQVLVYFQKYYSHWYLCQQMKVH*LCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTG...TTGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHQRARH*LYQMKV
Trigger: CACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTACCTCCAATCTTAGGTTaGTTGTTCCCAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVPPILG*LFPNKD
Trigger: ATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGG...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCACCTCCAATCTTAGGTTaGTTGTTCCCAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSPPILG*LFPNKD
Trigger: ATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGG...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTGGAGAACAGCCTGCTaGGCAGCAGAAGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNWRTAC*AAEAFG
Trigger: TCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAATTTCCAGCACTTTCTaGGGTTTGAGGAATAGGTTT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVISSTF*GLRNRF
Trigger: AAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAAT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGAGAATAATACCTGCTaGGTGCATATGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLENNTC*VHMVRI
Trigger: AATTCTTACCATATGCACCCAGCAGGTATTATTCTC...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTAAGGTCATCCATAGATaGAATAGTATAGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLKVIHR*NSIVTN
Trigger: GTTGGTTACTATACTATTCCATCTATGGATGACCTT...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACAAGGTCATCCATAGATaGAATAGTATAGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: VKRQMPARPHALPCTCFNKVIHR*NSIVTN
Trigger: GTTGGTTACTATACTATTCCATCTATGGATGACCTT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATCCATACTTAGAAAAATaGGAGACCTTAAACACCCAA +
Preference number: 4 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNPYLEK*ETLNTQ
Trigger: TTGGGTGTTTAAGGTCTCCCATTTTTCTAAGTATGG...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTTCCAAAACTGGCTCCTaGGTGATATCTACCATGTCA +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASSKTGS*VISTMS
Trigger: TGACATGGTAGATATCACCCAGGAGCCAGTTTTGGA...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTGCTCTCTTCTAACATaGTATCCAAAACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSCSLLT*YPKLAP
Trigger: AGGAGCCAGTTTTGGATACCATGTTAGAAGAGAGCA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTGGGTTTAACAGCTACTaGATTGGGCAGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLGFNSY*IGQESK
Trigger: TTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCC...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCCACAGTTCATCCACATaGACAGTGCTGTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGHSSST*TVLCFN
Trigger: ATTAAAACACAGCACTGTCCATGTGGATGAACTGTG...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCTCCACCTGCTGTATATaGCGGAGCATTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLSTCCI*RSISMT
Trigger: AGTCATTGAAATGCTCCGCCATATACAGCAGGTGGA...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTAAAGCCCTGAACAAGTaGAGGATGCTGCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPKALNK*RMLLLA
Trigger: TGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGTAGTAGCAAAGGTATaGTGTTCATGGAACTCTAAA +
Preference number: 4 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAVVAKV*CSWNSK
Trigger: TTTAGAGTTCCATGAACACCATACCTTTGCTACTAC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAATTCTGTCCAAATGTTaGAGTTGTGCCAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQILSKC*SCAKAT
Trigger: GGTGGCTTTGGCACAACTTCAACATTTGGACAGAAT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGTCCTGGTTTAGTCTGTaGATTTCCAAAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALSWFSL*ISKEAS
Trigger: GGAGGCCTCTTTGGAAATTCACAGACTAAACCAGGA...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALTGCTK*RCTGCA
Trigger: AGCACAACCAGTGCACCTTCATTTGGTACAACCAGT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCAGTATGTTAGACTATTaGTGTGCTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRSMLDY*CAAGEQ
Trigger: CTGTTCTCCAGCAGCACATCAATAGTCTAACATACT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACCTTCTTCTTAGGGTCTaGCATCGGATTCCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNLLLRV*HRIPEE
Trigger: CTCTTCCGGAATCCGATGTCAGACCCTAAGAAGAAG...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACCCCATCAAAGAGATGTaGCTTGGCTGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNPIKEM*LGCACC
Trigger: ACAACAGGCACAGCCAAGTCACATCTCTTTGATGGG...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTIFLHS*YQQGDL
Trigger: CAGATCGCCTTGCTGATATCAACTATGAAGGAAGAT...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHSSLFP*NCFQSS
Trigger: GGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCT...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGGAGAACAGATTTCTTaGGAAGTATCTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKGEQIS*EVSALE
Trigger: TTCCAAAGCAGATACTTCTCAAGAAATCTGTTCTCC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATTTTCTAAGTGAACTTTaGATGGGGACTCAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDFLSEL*MGTQLG
Trigger: CCCTAACTGAGTCCCCATTCAAAGTTCACTTAGAAA...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACTGAGTTTTTCTAAGTaGACTTTGAATGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPELSFSK*TLNGDS
Trigger: TGAGTCCCCATTCAAAGTTCACTTAGAAAAACTCAG...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGCTCCAGAGGTGTCTaGTATAATTTCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKSSRGV*YNFMSS
Trigger: TGAAGACATGAAATTATATCAGACACCTCTGGAGCT...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCTGCTGTGTTTTAATTTaGGCTCCAGAGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLCCVLI*APEVSD
Trigger: ATCAGACACCTCTGGAGCTCAAATTAAAACACAGCA...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGCACTTGTTTCAACGTaGTTGCCAATGTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRALVST*LPMFVL
Trigger: GAGTACAAACATTGGCAATCACGTTGAAACAAGTGC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCTAGCTTTCAGCAGCTaGGAGGTAGAGGATGCTTTA +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHLAFSS*EVEDAL
Trigger: TAAAGCATCCTCTACCTCTCAGCTGCTGAAAGCTAG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATTGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNCRCSK*PSTSSA
Trigger: GGCACTACTAGTGGAGGGGCATTTGGAACATCTGCA...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGTTGCTAGAACCAAATaGAGATGTTCCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQVARTK*RCSKCP
Trigger: GGGGCATTTGGAACATCTGCATTTGGTTCTAGCAAC...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGCAGTAATACACTGGTaGTTGGTACTTATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSAVIHW*LVLMLV
Trigger: CACTAACATAAGTACCAAGCACCAGTGTATTACTGC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCTTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLLAVLW*WYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAA...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTTCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATAGCTGTTCCAAATCCTaGACCAAGCCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNSCSKS*TKPSSK
Trigger: CTTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCT...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACGTTCCCAAACAAAGATaGCTGTCCAGCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNVPKQR*LSSTKS
Trigger: GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAAC...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGTGAGAATAATACCTaGTGGGTGCATATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSSENNT*WVHMVR
Trigger: TCTTACCATATGCACCCAGCAGGTATTATTCTCACT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATCCATTAAGAGCCATCTaGAAGGGCGTAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNPLRAI*KGVVWL
Trigger: AAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGG...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTGTAGTCCAAAGGATCTaGTGTTATGCTTCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPVVQRI*CYASRL
Trigger: GAGCCTCGAAGCATAACAGCAGATCCTTTGGACTAC...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTGAGAATGGCAAACAGTaGCAATCCAAACAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPENGKQ*QSKQGR
Trigger: CCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTC...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGTTTACATTATCTTCATaGATAAAGACCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LFWVPEALMLRSVLRKALFTLSS*IKTQVW
Trigger: CCACACCTGGGTCTTTATGCATGAAGATAATGTAAA...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAATTGCCAAAGCCAGTTaGTTTATTTTGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRIAKAS*FILCKG
Trigger: GCCTTTGCACAAAATAAACCAACTGGCTTTGGCAAT...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAATTGCCAAAGCCAGTTaGTTTATTTTGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEIAKAS*FILCKG
Trigger: GCCTTTGCACAAAATAAACCAACTGGCTTTGGCAAT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGATAGCAGTAATACACTaGTGCTTGGTACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLIAVIH*CLVLML
Trigger: TAACATAAGTACCAAGCACCAGTGTATTACTGCTAT...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATTGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNWVVVA*PNGLLK
Trigger: CTTCAGCAAACCATTTGGCCAGGCTACAACCACCCA...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCTCCAAATAATCCCATaGTGTTGGTGCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHLQIIP*CWCLAV
Trigger: GACAGCCAAGCACCAACACCATGGGATTATTTGGAG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCACCAAATCCAGTATTaGTCTGCCCAAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHHQIQY*SAQRDL
Trigger: CAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGGCAGCAGAAGCATTTaGATCTGTCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALGSRSI*ICQSYW
Trigger: CCAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCAAAGAGATGTGACTTaGCTGTGCCTGTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASQRDVT*LCLLFV
Trigger: TACAAACAACAGGCACAGCCAAGTCACATCTCTTTG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCAGATGTTTTATCTGTTaGCCAAACTCCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGRCFIC*PNSIQC
Trigger: ACATTGGATGGAGTTTGGCCAACAGATAAAACATCT...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGATTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRLKMLL*EYDILA
Trigger: TGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAA...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTTTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCA +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASLKMLL*EYDILA
Trigger: TGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAA...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCGGAATCCAAACTCCATaGAATCGGCAATCTGATGAT +
Preference number: 4 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLGIQTP*NRQSDD
Trigger: ATCATCAGATTGCCGATTCCATGGAGTTTGGATTCC...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCCACAGTTCATCCACATaGACAGTGCTGTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSHSSST*TVLCFN
Trigger: ATTAAAACACAGCACTGTCCATGTGGATGAACTGTG...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAATGGAGGCTGTTGGTaGAAGCAAATACCAAAGATG +
Preference number: 4 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRNGGCW*KQIPKM
Trigger: CATCTTTGGTATTTGCTTCCACCAACAGCCTCCATT...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTAATACCCTGGTTCTTTaGGGGATTCTGCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPNTLVL*GILPKE
Trigger: CTCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATT...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AGCCCAGTTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACAGGAGAATAACGTGTaGTATAGTCAGTGTAACTTT +
Preference number: 4 (lower is better)
Translates to: SPVPRVPGAGLLPKILFPQENNV*YSQCNF
Trigger: AAAGTTACACTGACTATACCACACGTTATTCTCCTG...TGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGAGAGACTACATGGAAACAAGAGAGACTACATaGAAAGGGATTTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ELVLRTGTEEKHKRDYMETRETT*KGILGE
Trigger: TTCTCCCAAAATCCCTTTCCATGTAGTCTCTCTTGT...TTCCATGTAGTCTCTCTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR TCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDKAVLF*PYAKPE
Trigger: TTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTT...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTTCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPSVILK*LIMKRR
Trigger: ACGTCTTTTCATGATGAGTCACTTCAGGATGACCGA...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATTCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHSVILK*LIMKRR
Trigger: ACGTCTTTTCATGATGAGTCACTTCAGGATGACCGA...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQIFLHS*YQQGDL
Trigger: CAGATCGCCTTGCTGATATCAACTATGAAGGAAGAT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNSSLFP*NCFQSS
Trigger: GGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCT...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAAGGAGAACAGATTTCTTaGGAAGTATCTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQGEQIS*EVSALE
Trigger: TTCCAAAGCAGATACTTCTCAAGAAATCTGTTCTCC...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTAGCTCCAGAGGTGTCTaGTATAATTTCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLSSRGV*YNFMSS
Trigger: TGAAGACATGAAATTATATCAGACACCTCTGGAGCT...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR GCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATACTGGTCCCTGTGCTTaGAGTTCCAAACAAGGTATT +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHTGPCA*SSKQGI
Trigger: AATACCTTGTTTGGAACTGCAAGCACAGGGACCAGT...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTACTGGTTCCAAAATTaGCAAAGCCAGTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSYWFQN*QSQLVY
Trigger: ATAAACCAACTGGCTTTGGCAATTTTGGAACCAGTA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAGCAGTAATACACTGGTaGTTGGTACTTATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTAVIHW*LVLMLV
Trigger: CACTAACATAAGTACCAAGCACCAGTGTATTACTGC...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATTTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDLAVLW*WYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAA...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHNPVLV*PKRPVP
Trigger: AGGAACAGGTCTCTTTGGGCAGACCAATACTGGATT...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALNPVLV*PKRPVP
Trigger: AGGAACAGGTCTCTTTGGGCAGACCAATACTGGATT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTAAGAGCCTTCTGGGCTaGTGGATTTGTTGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPKSLLG*WICWFQ
Trigger: TTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTT...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAAGAGCCTTCTGGGCTaGTGGATTTGTTGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALKSLLG*WICWFQ
Trigger: TTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTAGTGAGAATAATACCTaGTGGGTGCATATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLSENNT*WVHMVR
Trigger: TCTTACCATATGCACCCAGCAGGTATTATTCTCACT...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCAGTGAGAATAATACCTaGTGGGTGCATATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRSENNT*WVHMVR
Trigger: TCTTACCATATGCACCCAGCAGGTATTATTCTCACT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATCTTTCCTCCGGATATaGACAATATCATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVSFLRI*TISSKF
Trigger: AAATTTGGATGATATTGTGCATATCCGGAGGAAAGA...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCTAGTTTTAGACGGATaGTCCTCCTCCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHLVLDG*SSSSSS
Trigger: TGATGAAGAGGAGGAGGAGCATCCGTCTAAAACTAG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAACTGAGAGGTAGAGGATaGTTTACAAAGAAATCCCGT +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQLRGRG*FTKKSR
Trigger: ACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGCCAAAGAGACCACCTaGATTTGTTCCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALAKETT*ICSKSS
Trigger: ACTGGATTTGGAACAAATCCAGGTGGTCTCTTTGGC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAAAATACTATTCCCACTaGTATTTGTGCCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVKYYSH*YLCQNQ
Trigger: TTGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTGGTATTTGTGCCAACCTCCAATCTTAGGTTaGTTGTTCCCAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: SQVLVYFQKYYSHWYLCQPPILG*LFPNKD
Trigger: ATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGG...TTGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CCA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTGTTTAATGCAACAATaGTATCATCCACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSCLMQQ*YHPHCC
Trigger: GCAACAGTGTGGATGATACCATTGTTGCATTAAACA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATGTTTAATGCAACAATaGTATCATCCACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRCLMQQ*YHPHCC
Trigger: GCAACAGTGTGGATGATACCATTGTTGCATTAAACA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGAGAATAATACCTGCTaGGTGCATATGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKENNTC*VHMVRI
Trigger: AATTCTTACCATATGCACCCAGCAGGTATTATTCTC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAAAGGTCATCCATAGATaGAATAGTATAGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVKVIHR*NSIVTN
Trigger: GTTGGTTACTATACTATTCCATCTATGGATGACCTT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATTTTCTCTACCTGAGGTaGAGGTGCAGGTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNFLYLR*RCRFAI
Trigger: AATGGCAAACCTGCACCTCCACCTCAGGTAGAGAAA...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATTCAGCAAGTCCAAATaGGAGAGAACAAAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQFSKSK*ERTKGL
Trigger: TAAACCCTTTGTTCTCTCTCATTTGGACTTGCTGAA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGTGCATGAACCCACATaGGCAAATCTTAAGTTAATC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQVHEPT*ANLKLI
Trigger: GATTAACTTAAGATTTGCTCATGTGGGTTCATGCAC...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACATACTGGTTCCAAAATTaGCAAAGCCAGTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTYWFQN*QSQLVY
Trigger: ATAAACCAACTGGCTTTGGCAATTTTGGAACCAGTA...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTTACTGGTTCCAAAATTaGCAAAGCCAGTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: YATFSIKKSPEQVEDAASYWFQN*QSQLVY
Trigger: ATAAACCAACTGGCTTTGGCAATTTTGGAACCAGTA...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATTATCATCCACACTGTTaGTGTTGCTGTGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDYHPHC*CCCVYF
Trigger: GAAATAAACACAGCAACAGCAACAGTGTGGATGATA...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTTATCATCCACACTGTTaGTGTTGCTGTGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLYHPHC*CCCVYF
Trigger: GAAATAAACACAGCAACAGCAACAGTGTGGATGATA...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp GCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGATGTTTCTATCATCCACACTGTTaGTGTTGCTGTGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: AEHFNDSNIVQVNKPRCFYHPHC*CCCVYF
Trigger: GAAATAAACACAGCAACAGCAACAGTGTGGATGATA...GAAACATCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR GCA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATCTTTCCTCCGGATATaGACAATATCATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRSFLRI*TISSKF
Trigger: AAATTTGGATGATATTGTGCATATCCGGAGGAAAGA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAATTGCCAAAGCCAGTTaGTTTATTTTGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQIAKAS*FILCKG
Trigger: GCCTTTGCACAAAATAAACCAACTGGCTTTGGCAAT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTATAGCAGTAATACACTaGTGCTTGGTACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAIAVIH*CLVLML
Trigger: TAACATAAGTACCAAGCACCAGTGTATTACTGCTAT...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTAVLWC*YYQRKS
Trigger: GCTTTTCCTTTGGTAATACCAGCACCATAGGACAGC...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACACAAATGAAGGTGCACTaGTTGTGCTGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTQMKVH*LCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTG...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAATTTCCAGCACTTTCTaGGGTTTGAGGAATAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQISSTF*GLRNRF
Trigger: AAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAAT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGAGAATAATACCTGCTaGGTGCATATGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRENNTC*VHMVRI
Trigger: AATTCTTACCATATGCACCCAGCAGGTATTATTCTC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTAAGGTCATCCATAGATaGAATAGTATAGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAKVIHR*NSIVTN
Trigger: GTTGGTTACTATACTATTCCATCTATGGATGACCTT...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCCCATACTTAGAAAAATaGGAGACCTTAAACACCCAA +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRPYLEK*ETLNTQ
Trigger: TTGGGTGTTTAAGGTCTCCCATTTTTCTAAGTATGG...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTTGCTCTCTTCTAACATaGTATCCAAAACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPCSLLT*YPKLAP
Trigger: AGGAGCCAGTTTTGGATACCATGTTAGAAGAGAGCA...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR TCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNKAVLF*PYAKPE
Trigger: TTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTT...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR TCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATTTCAGCAAGTCCAAATaGGAGAGAACAAAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHFSKSK*ERTKGL
Trigger: TAAACCCTTTGTTCTCTCTCATTTGGACTTGCTGAA...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNLAVLW*WYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACATCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTCCAAGAGTCCCAGGTaGTGGTTTACTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNSKSPR*WFTSKN
Trigger: ATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATAGGCAGAATTTACTGTaGATGAACCCACATGAGCAA +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNRQNLL*MNPHEQ
Trigger: TTGCTCATGTGGGTTCATGCACAGTAAATTCTGCCT...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCATAGCAGTAATACACTaGTGCTTGGTACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRIAVIH*CLVLML
Trigger: TAACATAAGTACCAAGCACCAGTGTATTACTGCTAT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAAATACTATTCCCACTaGTATTTGTGCCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTKYYSH*YLCQNQ
Trigger: TTGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATAAATACTATTCCCACTaGTATTTGTGCCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDKYYSH*YLCQNQ
Trigger: TTGGTTTTGGCACAAATACCAGTGGGAATAGTATTT...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAAGAGTCCCAGGTGCTaGTTTACTTCCAAAAATACT +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALKSPRC*FTSKNT
Trigger: AGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACACAAAGAGATGTGACTTaGCTGTGCCTGTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTQRDVT*LCLLFV
Trigger: TACAAACAACAGGCACAGCCAAGTCACATCTCTTTG...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATCAAAGAGATGTGACTTaGCTGTGCCTGTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNQRDVT*LCLLFV
Trigger: TACAAACAACAGGCACAGCCAAGTCACATCTCTTTG...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATGTTTAATGCAACAATaGTATCATCCACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQCLMQQ*YHPHCC
Trigger: GCAACAGTGTGGATGATACCATTGTTGCATTAAACA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTAAGGTCATCCATAGATaGAATAGTATAGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLKVIHR*NSIVTN
Trigger: GTTGGTTACTATACTATTCCATCTATGGATGACCTT...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAAGATGTTTTATCTGTTaGCCAAACTCCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQRCFIC*PNSIQC
Trigger: ACATTGGATGGAGTTTGGCCAACAGATAAAACATCT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTCACAGTTCATCCACATaGACAGTGCTGTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPHSSST*TVLCFN
Trigger: ATTAAAACACAGCACTGTCCATGTGGATGAACTGTG...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR GCA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATTCTTTCCTCCGGATATaGACAATATCATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDSFLRI*TISSKF
Trigger: AAATTTGGATGATATTGTGCATATCCGGAGGAAAGA...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATCTTTCCTCCGGATATaGACAATATCATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQSFLRI*TISSKF
Trigger: AAATTTGGATGATATTGTGCATATCCGGAGGAAAGA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAACACATTCTCCAGAAATaGCTCCTAAGAGATTATTTA +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQHILQK*LLRDYL
Trigger: TAAATAATCTCTTAGGAGGCATTTCTGGAGAATGTG...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397004.8
CDS-3UTR CCA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAAAGGTCATCCATAGATaGAATAGTATAGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQKVIHR*NSIVTN
Trigger: GTTGGTTACTATACTATTCCATCTATGGATGACCTT...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGAGATGTTTTATCTGTTaGCCAAACTCCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: VIANVCTLQSSKGHKTALRCFIC*PNSIQC
Trigger: ACATTGGATGGAGTTTGGCCAACAGATAAAACATCT...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACATACTGGTTCCAAAATTaGCAAAGCCAGTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTYWFQN*QSQLVY
Trigger: ATAAACCAACTGGCTTTGGCAATTTTGGAACCAGTA...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACATATCATCCACACTGTTaGTGTTGCTGTGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTYHPHC*CCCVYF
Trigger: GAAATAAACACAGCAACAGCAACAGTGTGGATGATA...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAATGATACAAGTAATTaGGATAAACAATGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHNDTSN*DKQCRP
Trigger: GGGCCTACATTGTTTATCGCAATTACTTGTATCATT...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CCA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTATAGCAGTAATACACTaGTGCTTGGTACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPIAVIH*CLVLML
Trigger: TAACATAAGTACCAAGCACCAGTGTATTACTGCTAT...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACACCATACTTAGAAAAATaGGAGACCTTAAACACCCAA +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTPYLEK*ETLNTQ
Trigger: TTGGGTGTTTAAGGTCTCCCATTTTTCTAAGTATGG...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTTGTTTCAACGTGATTaGCAATGTTTGTACTCTTCA +
Preference number: 4 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNLFQRD*QCLYSS
Trigger: TGAAGAGTACAAACATTGGCAATCACGTTGAAACAA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR GCA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACATTGTTTCAACGTGATTaGCAATGTTTGTACTCTTCA +
Preference number: 4 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTLFQRD*QCLYSS
Trigger: TGAAGAGTACAAACATTGGCAATCACGTTGAAACAA...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS GCA 90 bp CTGCCACCGACCGCCGCTTCGGGCGCAGCGCGCAGAGGGCCCGACTaGGTCACACGCCGCCCGGCGTCAGAGGCTCGTTGCGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: LPPTAASGAARRGPD*VTRRPASEARCGRS
Trigger: GGAGCGTCCGCAACGAGCCTCTGACGCCGGGCGGCGTGTGACGCAGTCGGGCCCTCTGCGCGCTGCGCCCGAAGCGGCGGTCGGTGGCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS GCA 90 bp AGAGGGCCCGACTGCGTCACACGCCGCCCGGCGTCAGAGGCTCGTTaGGGACGCTCCGCCCTCGCCGTCCGCGAATTGGTGGACGCGGCC +
Preference number: 5 (lower is better)
Translates to: RGPDCVTRRPASEAR*GRSALAVRELVDAA
Trigger: GGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACGCCGGGCGGCGTGTGACGCAGTCGGGCCCTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CCA 90 bp CAGAGGCTCGTTGCGGACGCTCCGCCCTCGCCGTCCGCGAATTGGTaGACGCGGCCGCCACTCTGGGTCGACCCTGTTATTCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: QRLVADAPPSPSANW*TRPPLWVDPVIHWA
Trigger: TGCCCAATGAATAACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CCA 90 bp CGTCAGAGGCTCGTTGCGGACGCTCCGCCCTCGCCGTCCGCGAATTaGTGGACGCGGCCGCCACTCTGGGTCGACCCTGTTATTCATTGG +
Preference number: 5 (lower is better)
Translates to: RQRLVADAPPSPSAN*WTRPPLWVDPVIHW
Trigger: CCAATGAATAACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CCA 90 bp GCTCCGCCCTCGCCGTCCGCGAATTGGTGGACGCGGCCGCCACTCTaGGTCGACCCTGTTATTCATTGGGCAACGCGTCTTTTGAAACCG +
Preference number: 5 (lower is better)
Translates to: APPSPSANWWTRPPL*VDPVIHWATRLLKP
Trigger: CGGTTTCAAAAGACGCGTTGCCCAATGAATAACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACTCGCCGTCCGCGAATaGGTGGACGCGGCCGCCACT +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRLAVRE*VDAAAT
Trigger: AGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS GCA 90 bp GGCGACAGAGGCGCAGAGAAGGACCATATGCCTTCCCCACCTGACTaGTGGGCCAGAGAGCAGGCCTCACTGATCCTTTTGCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: GDRGAEKDHMPSPPD*WAREQASLILLPVR
Trigger: CCTCACAGGCAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAGCAGTCAGGTGGGGAAGGCATATGGTCCTTCTCTGCGCCTCTGTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483285.1
CDS-3UTR CAA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGGCGTCAGAGGCTCGTaGCGGACGCTCCGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSGVRGS*RTLRPR
Trigger: GCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACGCC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS TCA 90 bp GGAAGGCGACAGAGGCGCAGAGAAGGACCATATGCCTTCCCCACCTaGCTGCTGGGCCAGAGAGCAGGCCTCACTGATCCTTTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GRRQRRREGPYAFPT*LLGQRAGLTDPFAC
Trigger: ACAGGCAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAGCAGTCAGGTGGGGAAGGCATATGGTCCTTCTCTGCGCCTCTGTCGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483285.1
CDS-3UTR CAA 90 bp CCCATGGCCCTGGCACTGCAAGAGCGGGGGCAGGTCTCTGGATGTGAGGCCTCCCCCCAAATAGAGAGCTaGTTCTCAGAACAGGTACTG +
Preference number: 5 (lower is better)
Translates to: PMALALQERGQVSGCEASPQIES*FSEQVL
Trigger: CAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGG...GGAGGCCTCACATCCAGAGACCTGCCCCCGCTCTTGCAGTGCCAGGGCCATGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAACCACGCGCAGCAGGTaGGCTACACGTTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRTTRSR*ATRLAM
Trigger: CATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGGT...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACCATGGTGTTGGTGCTaGGCTGTCCTATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRPWCWC*AVLWCW
Trigger: CCAGCACCATAGGACAGCCAAGCACCAACACCATGG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAGCCTCGTGGATCCATTaGGCAGGTACACGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRASWIH*AGTRSF
Trigger: GAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGC...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRCRMMS*WQRFQC
Trigger: GCACTGGAACCGCTGCCACAAGCTCATCATCCGACA...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGTTCGTCCATGGCATAGTCCTCAGGCATGGGAAGCCGGCCAATGTGGGGAGCGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: QFVHGIVLRHGKPANVGSDWSLC*QFQTRY
Trigger: ATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTC...GCTCCCCACATTGGCCGGCTTCCCATGCCTGAGGACTATGCCATGGACGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACAGTCTGCTGATTCTGTaGGCCAAAGAGACCACCTGG +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHSLLIL*AKETTW
Trigger: CCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACT...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGACCACGCGCAGCAGGTaGGCTACACGTTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWTTRSR*ATRLAM
Trigger: CATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGGT...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS GCA 90 bp GCTGGAAGTGGCTGGAGAAGACCCAAACAAGCCAGTTGTGGTACCTaGTCCCACCTGGTTCTGTGGGCCCTTCCTGTTAGCCTGATAATC +
Preference number: 5 (lower is better)
Translates to: AGSGWRRPKQASCGT*SHLVLWALPVSLII
Trigger: GATTATCAGGCTAACAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 90 bp ATTAGTGGTGGAGGAGCTGAAGAGTCCTGTTGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCCAGTTGTGGTACCTGCTCCCACCTG +
Preference number: 5 (lower is better)
Translates to: ISGGGAEESCCAGSG*RRPKQASCGTCSHL
Trigger: CAGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGCTCCTCCACCACTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHDWSLC*QFQTRY
Trigger: ATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCTGCGCTCTGGAGGTGCCAGGTCTTCCAAGAACCCCTTCAGGTAGTCATAGTTGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: AALWRCQVFQEPLQVVIVDEGVC*ELMPVH
Trigger: GTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATC...AACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCCAGAGCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACAGGGCCTCTAAGTGCTaGTCAGATTCCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHRASKC*SDSMCA
Trigger: AGCACACATGGAATCTGACAAGCACTTAGAGGCCCT...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGAATACCCTGGTTCTTaGGGGGATTCTGCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHEYPGS*GDSAKG
Trigger: TCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGACCATGGTGTTGGTGCTaGGCTGTCCTATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: IKKSPEQVEDAASGSREGPWCWC*AVLWCW
Trigger: CCAGCACCATAGGACAGCCAAGCACCAACACCATGG...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAGCACCAAATCCAGTATaGGTCTGCCCAAAGAGACCT +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRAPNPV*VCPKRP
Trigger: AGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGC...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTTGGCCGGACTCTAGTGGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: LWPDSSGRAGCQFIMSRCRARHW*YQMKVH
Trigger: GTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCT...ACACCTACTCATTATAAACTGACACCCCGCCCTGCCACTAGAGTCCGGCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGRARHW*YQMKVH
Trigger: GTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGTTCGTCCATGGCATAGTCCTCAGGCATGGGAAGCCGGCCAATGTGGGGAGCCCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCC +
Preference number: 5 (lower is better)
Translates to: QFVHGIVLRHGKPANVGSPILGW*FPNKDA
Trigger: GGCATCTTTGTTTGGGAACAACCAACCTAAGATTGG...GCTCCCCACATTGGCCGGCTTCCCATGCCTGAGGACTATGCCATGGACGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGGGCTGCTGGATTTGTaGGTTTCAATCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHGLLDL*VSISLP
Trigger: AGGAAGAGAGATTGAAACCAACAAATCCAGCAGCCC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: DPGVAILPEIALTPAISCDEGVC*ELMPVH
Trigger: GTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGCCTCGTGGATCCATTaGGCAGGTACACGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAASWIH*AGTRSF
Trigger: GAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGCCTCGTGGATCCATTaGGCAGGTACACGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSASWIH*AGTRSF
Trigger: GAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVCRMMS*WQRFQC
Trigger: GCACTGGAACCGCTGCCACAAGCTCATCATCCGACA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGCTGAGGGTCTGGTGTaGAGTCGGAGGTTCTATCAG +
Preference number: 5 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWAEGLV*SRRFYQ
Trigger: CTGATAGAACCTCCGACTCAACACCAGACCCTCAGC...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGCTGAGGGTCTGGTGTaGAGTCGGAGGTTCTATCAG +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLAEGLV*SRRFYQ
Trigger: CTGATAGAACCTCCGACTCAACACCAGACCCTCAGC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS GCA 90 bp AAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGAACAGCCTTCTCACGTATGCTGTCA +
Preference number: 5 (lower is better)
Translates to: KVSLAQDSGVSNSWQ*RVSSSRTAFSRMLS
Trigger: TGACAGCATACGTGAGAAGGCTGTTCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355260.7
CDS GCA 90 bp AAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGCTGGCAGTaGCGGGTAAGCAGCTCTCGAACAGCCTTCTCACGTATGCTTCAC +
Preference number: 5 (lower is better)
Translates to: KVSLAQDSGVSNSWQ*RVSSSRTAFSRMLH
Trigger: GTGAAGCATACGTGAGAAGGCTGTTCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524563.1
CDS CCA 90 bp ATGTATTCACGGGGTTCATTTAGCTGGCTGTCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACATAGTGTCCATGTCAGGCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: MYSRGSFSWLSSSFR*PHRASHSVHVRLQC
Trigger: GCACTGGAGCCTGACATGGACACTATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGACAGCCAGCTAAATGAACCCCGTGAATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000483285.1
ENST00000529063.1
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACGTGCTAACTCCAGCTTaGACCATAGTATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHVLTPA*TIVSVP
Trigger: TGGTACAGATACTATGGTCAAAGCTGGAGTTAGCAC...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAACCATGGTGTTGGTGCTaGGCTGTCCTATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQPWCWC*AVLWCW
Trigger: CCAGCACCATAGGACAGCCAAGCACCAACACCATGG...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp GTGGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCGCACCAAATCCAGTATaGGTCTGCCCAAAGAGACCT +
Preference number: 5 (lower is better)
Translates to: VAVVVLNPGAPKAPVPRGAPNPV*VCPKRP
Trigger: AGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGC...GCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACTATTCCCACTGGTATTaGTGCCAAAACCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHYSHWY*CQNQRA
Trigger: GGCTCTTTGGTTTTGGCACAAATACCAGTGGGAATA...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGGCATGAATGCTCCATaGGCTAGGGATGGTTCATCG +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLGMNAP*ARDGSS
Trigger: CGATGAACCATCCCTAGCCAATGGAGCATTCATGCC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGAGAGCTCCCTGTTTCCTaGAAACTGCTTCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRELPVS*KLLPIF
Trigger: GAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTC...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGATTAGCAAGAGTCCAGTaGGGGCCCCAACCAACACGA +
Preference number: 5 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGLARVQ*GPQPTR
Trigger: TCGTGTTGGTTGGGGCCCCAACTGGACTCTTGCTAA...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVDEGVC*ELMPVH
Trigger: GTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACGCCTCGTGGATCCATTaGGCAGGTACACGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYASWIH*AGTRSF
Trigger: GAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGC...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAGCCTCGTGGATCCATTaGGCAGGTACACGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQASWIH*AGTRSF
Trigger: GAAGCTCCGTGTACCTGCCAAATGGATCCACGAGGC...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CAA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVCARTA*ASWIHL
Trigger: CAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGATGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGCARTA*ASWIHL
Trigger: CAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACA...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGATGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: IKKSPEQVEDAASGSREGCARTA*ASWIHL
Trigger: CAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACA...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSCARTA*ASWIHL
Trigger: CAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACA...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAACCACGCGCAGCAGGTaGGCTACACGTTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSTTRSR*ATRLAM
Trigger: CATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGGT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGCTGAGGGTCTGGTGTaGAGTCGGAGGTTCTATCAG +
Preference number: 5 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSAEGLV*SRRFYQ
Trigger: CTGATAGAACCTCCGACTCAACACCAGACCCTCAGC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCCAGGTGTGGCCATATaGCCTGAGATAGCCCTAACA +
Preference number: 5 (lower is better)
Translates to: DPGVAILPEIALTPAISCPGVAI*PEIALT
Trigger: TGTTAGGGCTATCTCAGGCAATATGGCCACACCTGG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCTCACGTATGCCTGAGTTGTCAATGTGCAGGAGGACAAAGATGGCCCACTCCCCCAGGTGTGGCCATATaGCCTGAGATAGCCCTAACA +
Preference number: 5 (lower is better)
Translates to: SHVCLSCQCAGGQRWPTPPGVAI*PEIALT
Trigger: TGTTAGGGCTATCTCAGGCAATATGGCCACACCTGG...GGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAGGCATACGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp GGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCCCGGGCTGCTGGATTTGTaGGTTTCAATCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GCRSIKSRGPKGSCTKRPGLLDL*VSISSF
Trigger: GAAGGAAGAGATTGAAACCAACAAATCCAGCAGCCC...GGGCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCGTCCAAATGTTGAAGTaGTGCCAAAGCCACCTGTGC +
Preference number: 5 (lower is better)
Translates to: DPGVAILPEIALTPAISCVQMLK*CQSHLC
Trigger: GCACAGGTGGCTTTGGCACAACTTCAACATTTGGAC...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWDWSLC*QFQTRY
Trigger: ATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTC...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TGCCAGTCCACCAACTGCATGGTGAGCAGCTCCCGGACTGACTGGCTACCCACAGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: CQSTNCMVSSSRTDWLPTVIHWC*VLMLVL
Trigger: TAGCACTAACATAAGTACCAAGCACCAGTGTATTAC...TGTGGGTAGCCAGTCAGTCCGGGAGCTGCTCACCATGCAGTTGGTGGACTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAACCCAAACAAGCCAGTaGTGGTACCTGCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVATQTSQ*WYLLPP
Trigger: AGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGT...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACACCCAAACAAGCCAGTaGTGGTACCTGCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYTQTSQ*WYLLPP
Trigger: AGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGT...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCAAGAGCCCATGGTGTTGGTGCTaGGCTGTCCTATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SNLRLVVPKQRCLSSTKSPWCWC*AVLWCW
Trigger: CCAGCACCATAGGACAGCCAAGCACCAACACCATGG...GCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGCACCAAATCCAGTATaGGTCTGCCCAAAGAGACCT +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLAPNPV*VCPKRP
Trigger: AGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWRARHW*YQMKVH
Trigger: GTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCT...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAGGTGGAGGTGCAGGTTaGCCATTAAGAGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEGGGAG*PLRAIC
Trigger: GCAGATGGCTCTTAATGGCAAACCTGCACCTCCACC...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAAGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQDEGVC*ELMPVH
Trigger: GTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATC...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCATGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSCRMMS*WQRFQC
Trigger: GCACTGGAACCGCTGCCACAAGCTCATCATCCGACA...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGCTGAGGGTCTGGTGTaGAGTCGGAGGTTCTATCAG +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHAEGLV*SRRFYQ
Trigger: CTGATAGAACCTCCGACTCAACACCAGACCCTCAGC...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGGAATACCCTGGTTCTTaGGGGGATTCTGCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGEYPGS*GDSAKG
Trigger: TCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTC...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCCAGGCCAACCCTCCTTaGCCTCCAAAATTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLQANPP*PPKFSV
Trigger: AACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCTG...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGCCTGTCCAGCACCAAGAGCTGTTCCAAATCCTGCACCAAGCCCAGTTCCAAAAAGTCAGGGTTGGTTaGTTACCAAAGAGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: MPVQHQELFQILHQAQFQKVRVG*LPKSPP
Trigger: TGGCGGGCTCTTTGGTAACAAACCAACCCTGACTTT...TTGGAACTGGGCTTGGTGCAGGATTTGGAACAGCTCTTGGTGCTGGACAGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS GCA 90 bp TTGCCAAACAGGGTCGAACCAACAGCACCAAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCTGTTCCAAATGCTGTCCCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LPNRVEPTAPNPVLV*PKRPVPVPNAVPVL
Trigger: CAGCACTGGGACAGCATTTGGAACAGGAACAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGCTGTTGGTTCGACCCTGTTTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CCA 90 bp GGCTGTCCTATGGTGCTGGTATTACCAAAGGAAAAGCCAGTGTTCTaGGTGGTTGTAGCCTGGCCAAATGGTTTGCTGAAGAGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: GCPMVLVLPKEKPVF*VVVAWPNGLLKRLV
Trigger: TACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACAACCACCCAGAACACTGGCTTTTCCTTTGGTAATACCAGCACCATAGGACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 90 bp GGAGGTGCAGGTTTGCCATTAAGAGCCATCTGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGAGCAGTCTTCAACTTCTTTGTACTA +
Preference number: 5 (lower is better)
Translates to: GGAGLPLRAICKGVV*LAGGKGAVFNFFVL
Trigger: TAGTACAAAGAAGTTGAAGACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGGCAAACCTGCACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: TANPENGKQCQSKQGREPDWSLC*QFQTRY
Trigger: ATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTC...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVDWSLC*QFQTRY
Trigger: ATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAACCCAAACAAGCCAGTaGTGGTACCTGCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAATQTSQ*WYLLPP
Trigger: AGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGACCCAAACAAGCCAGTaGTGGTACCTGCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRTQTSQ*WYLLPP
Trigger: AGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGT...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTTGGCCGGACTCTAGTGGCAGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAATAATCCCATGGTGTaGGTGCTTGGCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: LWPDSSGRAGCQFIMSRCNNPMV*VLGCPM
Trigger: CATAGGACAGCCAAGCACCAACACCATGGGATTATT...ACACCTACTCATTATAAACTGACACCCCGCCCTGCCACTAGAGTCCGGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp AAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGACCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: KALNKWRMLLLAAGREGRPNVVS*LLPNRV
Trigger: GACCCTGTTTGGCAATAACAAGCTTACTACATTTGG...TCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLRARHW*YQMKVH
Trigger: GTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCT...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAGGCATGAATGCTCCATaGGCTAGGGATGGTTCATCG +
Preference number: 5 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEGMNAP*ARDGSS
Trigger: CGATGAACCATCCCTAGCCAATGGAGCATTCATGCC...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGGCATGAATGCTCCATaGGCTAGGGATGGTTCATCG +
Preference number: 5 (lower is better)
Translates to: VKRQMPARPHALPCTCFNGMNAP*ARDGSS
Trigger: CGATGAACCATCCCTAGCCAATGGAGCATTCATGCC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGGTGGAGGTGCAGGTTaGCCATTAAGAGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLGGGAG*PLRAIC
Trigger: GCAGATGGCTCTTAATGGCAAACCTGCACCTCCACC...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATTAGCAAGAGTCCAGTaGGGGCCCCAACCAACACGA +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAALARVQ*GPQPTR
Trigger: TCGTGTTGGTTGGGGCCCCAACTGGACTCTTGCTAA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATAGCCAGCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTGAATGTATTCACGGGTTAGCAAGAGTCCAGTaGGGGCCCCAACCAACACGA +
Preference number: 5 (lower is better)
Translates to: IASGRKLFFAPEFECIHGLARVQ*GPQPTR
Trigger: TCGTGTTGGTTGGGGCCCCAACTGGACTCTTGCTAA...CCCGTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGCTGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR CAA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGTTAGCAAGAGTCCAGTaGGGGCCCCAACCAACACGA +
Preference number: 5 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRLARVQ*GPQPTR
Trigger: TCGTGTTGGTTGGGGCCCCAACTGGACTCTTGCTAA...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp AGAGCAGGCCTCACTGATCCTTTTGCCTGTGAGGTAGCTGAATACAGCCTCCACTTAACAGCTACTGGATaGGGCAGGAATCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: RAGLTDPFACEVAEYSLHLTATG*GRNPNS
Trigger: GGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAA...GTGGAGGCTGTATTCAGCTACCTCACAGGCAAAAGGATCAGTGAGGCCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTTAACAGCTACTGGATaGGGCAGGAATCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLLTATG*GRNPNS
Trigger: GGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAA...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGATGAAGGAGTCTGCTaGGAGCTGATGCCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAADEGVC*ELMPVH
Trigger: GTGGACTGGCATCAGCTCCAAGCAGACTCCTTCATC...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp TCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: SLMMASEAKCRMMSLWQRCARTA*ASWIHL
Trigger: CAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACA...CCGCTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAAGGGCCTCTAAGTGCTaGTCAGATTCCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWARASKC*SDSMCA
Trigger: AGCACACATGGAATCTGACAAGCACTTAGAGGCCCT...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGTGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LFWVPEALMLRSVLRKALCRMMS*WQRFQC
Trigger: GCACTGGAACCGCTGCCACAAGCTCATCATCCGACA...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAACCACGCGCAGCAGGTaGGCTACACGTTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: LLGSRSPYATFSIKKSPETTRSR*ATRLAM
Trigger: CATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGGT...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGCTGAGGGTCTGGTGTaGAGTCGGAGGTTCTATCAG +
Preference number: 5 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLAEGLV*SRRFYQ
Trigger: CTGATAGAACCTCCGACTCAACACCAGACCCTCAGC...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGGAATACCCTGGTTCTTaGGGGGATTCTGCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVEYPGS*GDSAKG
Trigger: TCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTC...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCAGGGTGGGAAATGCTTaGGAGCTAACATGGGATGAA +
Preference number: 5 (lower is better)
Translates to: DPGVAILPEIALTPAISCRVGNA*ELTWDE
Trigger: TTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCT...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGCCAGGTGTGGCCATATaGCCTGAGATAGCCCTAACA +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWPGVAI*PEIALT
Trigger: TGTTAGGGCTATCTCAGGCAATATGGCCACACCTGG...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS CCA 90 bp ACCAAAGGAAAAGCCAGTGTTCTGGGTGGTTGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGTAGTCTGCTGATTCTGTTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: TKGKASVLGGCSLAK*FAEEAGSLLILLAK
Trigger: TTTGGCCAACAGAATCAGCAGACTACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACAACCACCCAGAACACTGGCTTTTCCTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 90 bp TCCTCAGGCATGCTCTCTTCTAACATGGTATCCAAAACTGGCTCCTaGGTGATATCTACCATGTCACTGTCCAGTTCCACAACCCTCCCT +
Preference number: 5 (lower is better)
Translates to: SSGMLSSNMVSKTGS*VISTMSLSSSTTLP
Trigger: AGGGAGGGTTGTGGAACTGGACAGTGACATGGTAGATATCACCCAGGAGCCAGTTTTGGATACCATGTTAGAAGAGAGCATGCCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTATTTGCTGTTCCTGTaGACGTACCAAACCCAAAGC +
Preference number: 5 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGYLLFL*TYQTQS
Trigger: GCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATA...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCGTGCTAACTCCAGCTTaGACCATAGTATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLVLTPA*TIVSVP
Trigger: TGGTACAGATACTATGGTCAAAGCTGGAGTTAGCAC...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCAGAGACCACCTGGATTaGTTCCAAATCCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLRDHLD*FQIQLY
Trigger: GTACAACTGGATTTGGAACAAATCCAGGTGGTCTCT...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGAATAATCCCATGGTGTaGGTGCTTGGCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVNNPMV*VLGCPM
Trigger: CATAGGACAGCCAAGCACCAACACCATGGGATTATT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPRARHW*YQMKVH
Trigger: GTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCT...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGGGGCAGCAGAAGCATTaGGATCTGTCAAAGCTACTG +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWGQQKH*DLSKLL
Trigger: CAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCCC...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGGGCAGCAGAAGCATTaGGATCTGTCAAAGCTACTG +
Preference number: 5 (lower is better)
Translates to: RWRVGNALELTWDEQGGLGQQKH*DLSKLL
Trigger: CAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCCC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AATCCTGCACCAAGCCCAGTTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAGGGCAGCAGAAGCATTaGGATCTGTCAAAGCTACTG +
Preference number: 5 (lower is better)
Translates to: NPAPSPVPRVPGAGLLPKGQQKH*DLSKLL
Trigger: CAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCCC...TTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCTTGGTGCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp GTGGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACA +
Preference number: 5 (lower is better)
Translates to: VAVVVLNPGAPKAPVPRGEYVRL*MCCWRT
Trigger: TGTTCTCCAGCAGCACATCAATAGTCTAACATACTC...GCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTGGGCTGCTGGATTTGTaGGTTTCAATCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TANPENGKQCQSKQGREPGLLDL*VSISLP
Trigger: AGGAAGAGAGATTGAAACCAACAAATCCAGCAGCCC...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTCTGGGCTGCTGGATTaGTTGGTTTCAATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWSGLLD*LVSISL
Trigger: AAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGA...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTCAAAGAGATGTGACTaGGCTGTGCCTGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGSKRCD*AVPVVC
Trigger: ACAAACAACAGGCACAGCCAAGTCACATCTCTTTGA...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCAGCACTTTCTGGGGTTaGAGGAATAGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: DPGVAILPEIALTPAISCSTFWG*RNRFGN
Trigger: ATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCT...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGACCAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGAGCACTTTCTGGGGTTaGAGGAATAGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: GPNQTLGASHRHVTCDQGSTFWG*RNRFGN
Trigger: ATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCT...CCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGTTAGCAAGAGTCCAGTaGGGGCCCCAACCAACACGA +
Preference number: 5 (lower is better)
Translates to: LFWVPEALMLRSVLRKALLARVQ*GPQPTR
Trigger: TCGTGTTGGTTGGGGCCCCAACTGGACTCTTGCTAA...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAGGGTAGATGCCACTTCATCTGGCTTTCTTaGTCTCAAACTGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LNKWRMLLLAAGREGRCHFIWLS*SQTEFF
Trigger: GAAAAACTCAGTTTGAGACAAAGAAAGCCAGATGAA...GTGGCATCTACCCTCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTCTTCGCTCCAGAATTaGAATGTATTCACGGGGTTC +
Preference number: 5 (lower is better)
Translates to: QPTQRMANSANPNKAGNLSSLQN*NVFTGF
Trigger: GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGA...GAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGAGGGCCTCTAAGTGCTaGTCAGATTCCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWRASKC*SDSMCA
Trigger: AGCACACATGGAATCTGACAAGCACTTAGAGGCCCT...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGTGTCGGATGATGAGCTaGTGGCAGCGGTTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQCRMMS*WQRFQC
Trigger: GCACTGGAACCGCTGCCACAAGCTCATCATCCGACA...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CAA 90 bp TGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATAAGCAACAGGCCAACCCTCCTTaGCCTCCAAAATTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: CRMMSLWQRFQCSALNKQQANPP*PPKFSV
Trigger: AACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCTG...TTGCTTATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp GTGGCTGTCGTAGTATTAAATCCAGGGGCCCCAAAGGCTCCTGTACCAAGAGGCTATTCCCACTGGTATTaGTGCCAAAACCTGAGAACT +
Preference number: 5 (lower is better)
Translates to: VAVVVLNPGAPKAPVPRGYSHWY*CQNLRT
Trigger: AGTTCTCAGGTTTTGGCACAAATACCAGTGGGAATA...GCCTCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACTACGACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS TCA 90 bp GTTGTAGCCTGGCCAAATGGTTTGCTGAAGAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGACCACCTGGATTTGTTCCAAATCCA +
Preference number: 5 (lower is better)
Translates to: VVAWPNGLLKRLVVC*FCWPKRPPGFVPNP
Trigger: TGGATTTGGAACAAATCCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 90 bp CAGGCATGCTCTCTTCTAACATGGTATCCAAAACTGGCTCCTGGGTaGTATCTACCATGTCACTGTCCAGTTCCACAACCCTCCCTAACT +
Preference number: 5 (lower is better)
Translates to: QACSLLTWYPKLAPG*YLPCHCPVPQPSLT
Trigger: AGTTAGGGAGGGTTGTGGAACTGGACAGTGACATGGTAGATATCACCCAGGAGCCAGTTTTGGATACCATGTTAGAAGAGAGCATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS GCA 90 bp AAATCCAGTATTGGTCTGCCCAAAGAGACCTGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTTTGTAGCTGTCCCAAAAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: KSSIGLPKETCSCSK*CPSAGVCSCPKKTS
Trigger: GGAGGTCTTTTTGGGACAGCTACAAACACCAGCACTGGGACAGCATTTGGAACAGGAACAGGTCTCTTTGGGCAGACCAATACTGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CCA 90 bp GGGTTACTCCAAATAATCCCATGGTGTTGGTGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGGAAAAGCCAGTGTTCTGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GLLQIIPWCWCLAVL*CWYYQRKSQCSGWL
Trigger: CAACCACCCAGAACACTGGCTTTTCCTTTGGTAATACCAGCACCATAGGACAGCCAAGCACCAACACCATGGGATTATTTGGAGTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CCA 90 bp TGGTTCCTAAAGTCAGGGTTGGTTTGTTACCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTGCACTGGTTGTGCTGCTTCCAAATG +
Preference number: 5 (lower is better)
Translates to: WFLKSGLVCYQRARH*LYQMKVHWLCCFQM
Trigger: CATTTGGAAGCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTAACAAACCAACCCTGACTTTAGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359171.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
CDS-3UTR CAA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAAGGCCTCCAGTATTGTaGCTAGAACCAAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWARPPVL*LEPNAD
Trigger: ATCTGCATTTGGTTCTAGCAACAATACTGGAGGCCT...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTAAGAGGCCTCCAGTATaGTTGCTAGAACCAAATGCA +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVKRPPV*LLEPNA
Trigger: TGCATTTGGTTCTAGCAACAATACTGGAGGCCTCTT...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTATTTGCTGTTCCTGTaGACGTACCAAACCCAAAGC +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVYLLFL*TYQTQS
Trigger: GCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATA...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAGTGCTAACTCCAGCTTaGACCATAGTATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGVLTPA*TIVSVP
Trigger: TGGTACAGATACTATGGTCAAAGCTGGAGTTAGCAC...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCAGTCTGCTGATTCTGTaGGCCAAAGAGACCACCTGG +
Preference number: 5 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGSLLIL*AKETTW
Trigger: CCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACT...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAAGTCTGCTGATTCTGTaGGCCAAAGAGACCACCTGG +
Preference number: 5 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVSLLIL*AKETTW
Trigger: CCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAACCATGGTGTTGGTGCTaGGCTGTCCTATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQPWCWC*AVLWCW
Trigger: CCAGCACCATAGGACAGCCAAGCACCAACACCATGG...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACCAAACTCTGGGAGCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: QTKLWELPTDMSHVTKGSVVSLL*PNRVEP
Trigger: TGGTTCGACCCTGTTTGGCAATAACAAGCTTACTAC...GGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGCTCCCAGAGTTTGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTCCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCC +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVPILGW*FPNKDA
Trigger: GGCATCTTTGTTTGGGAACAACCAACCTAAGATTGG...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AGGCCCTCCAATCTTAGGTTGGTTGTTCCCAAACAAAGATGCCTGTCCAGCACCCCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCC +
Preference number: 5 (lower is better)
Translates to: RPSNLRLVVPKQRCLSSTPILGW*FPNKDA
Trigger: GGCATCTTTGTTTGGGAACAACCAACCTAAGATTGG...GGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGGGCTGCTGGATTTGTaGGTTTCAATCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHGLLDL*VSISLP
Trigger: AGGAAGAGAGATTGAAACCAACAAATCCAGCAGCCC...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGGCATGAATGCTCCATaGGCTAGGGATGGTTCATCG +
Preference number: 5 (lower is better)
Translates to: LFWVPEALMLRSVLRKALGMNAP*ARDGSS
Trigger: CGATGAACCATCCCTAGCCAATGGAGCATTCATGCC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGAGCACTTTCTGGGGTTaGAGGAATAGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVSTFWG*RNRFGN
Trigger: ATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCT...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCAGAGCTCCCTGTTTCCTaGAAACTGCTTCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVAELPVS*KLLPIF
Trigger: GAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTC...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGAGCTCCCTGTTTCCTaGAAACTGCTTCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: VKRQMPARPHALPCTCFNELPVS*KLLPIF
Trigger: GAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGGTGGAGGTGCAGGTTaGCCATTAAGAGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKGGGAG*PLRAIC
Trigger: GCAGATGGCTCTTAATGGCAAACCTGCACCTCCACC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAAAGATGCAATATGTGTaGAGGCAGACACAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAKMQYV*RQTQVP
Trigger: AGGAACCTGTGTCTGCCTCAACACATATTGCATCTT...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCATTAACAGCTACTGGATaGGGCAGGAATCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVALTATG*GRNPNS
Trigger: GGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAA...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTATTAACAGCTACTGGATaGGGCAGGAATCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: RWRVGNALELTWDEQGGLLTATG*GRNPNS
Trigger: GGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAA...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTTCTTCGCTCCAGAATTaGAATGTATTCACGGGGTTC +
Preference number: 5 (lower is better)
Translates to: TANPENGKQCQSKQGREPSSLQN*NVFTGF
Trigger: GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGA...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGATCTTCGCTCCAGAATTaGAATGTATTCACGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGSSLQN*NVFTGF
Trigger: GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGA...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGATGTGCTCGCACAGCTTaGGCCTCGTGGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRCARTA*ASWIHL
Trigger: CAAATGGATCCACGAGGCCAAAGCTGTGCGAGCACA...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAAGGGCCTCTAAGTGCTaGTCAGATTCCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSRASKC*SDSMCA
Trigger: AGCACACATGGAATCTGACAAGCACTTAGAGGCCCT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTCACAGTGAAGTCACTTaGATGTGTAACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAHSEVT*MCNCSR
Trigger: CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTG...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TATATGGCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGAACCACGCGCAGCAGGTaGGCTACACGTTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: YMAEHFNDSNIVQVNKPRTTRSR*ATRLAM
Trigger: CATGGCCAAACGTGTAGCCAACCTGCTGCGCGTGGT...TCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGCCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATAGGGTGGGAAATGCTTaGGAGCTAACATGGGATGAA +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHRVGNA*ELTWDE
Trigger: TTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCT...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACTGCCTCAGTCATGGTTaGTTTTTGCTTCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYCLSHG*FLLLEG
Trigger: CCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCA...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTTGCCTCAGTCATGGTTaGTTTTTGCTTCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLCLSHG*FLLLEG
Trigger: CCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCA...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATTGCCTCAGTCATGGTTaGTTTTTGCTTCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHCLSHG*FLLLEG
Trigger: CCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCA...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATCGACCCTGTTATTCATaGGGCAACGCGTCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHRPCYS*GNASFE
Trigger: TTCAAAAGACGCGTTGCCCAATGAATAACAGGGTCG...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR CAA 90 bp GTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCCTTTGCCAAAGTCAGGGTTGGTTaGTTACCAAAGAGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: VCQKDPILFPNSGQPSFAKVRVG*LPKSPP
Trigger: TGGCGGGCTCTTTGGTAACAAACCAACCCTGACTTT...GGCAAAGGAGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS-3UTR CAA 90 bp AGGGCGGGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGGGCTGCTTCCTAAAGTCAGGGTaGGTTTGTTACCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: RAGCQFIMSRCSKSLLGCFLKSG*VCYQRA
Trigger: GGCTCTTTGGTAACAAACCAACCCTGACTTTAGGAA...GCAGCCCAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCCCGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCACGCCCTCCCTTGCACTaGTTTCAACGTGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSRPPLH*FQRDCQ
Trigger: TTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCG...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS TCA 90 bp CAGGGTTGGTTTGTTACCAAAGAGCCCGCCACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCTGCTTCCAAATGTAGTAAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: QGWFVTKEPATGCTK*RCTGCAASKCSKLV
Trigger: AACAAGCTTACTACATTTGGAAGCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTAACAAACCAACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359171.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
CDS-3UTR CAA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAAAGGCCTCCAGTATTGTaGCTAGAACCAAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCERPPVL*LEPNAD
Trigger: ATCTGCATTTGGTTCTAGCAACAATACTGGAGGCCT...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTAAGAGGCCTCCAGTATaGTTGCTAGAACCAAATGCA +
Preference number: 5 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLKRPPV*LLEPNA
Trigger: TGCATTTGGTTCTAGCAACAATACTGGAGGCCTCTT...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACTATTTGCTGTTCCTGTaGACGTACCAAACCCAAAGC +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYYLLFL*TYQTQS
Trigger: GCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATA...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGCTAACTCCAGCTTaGACCATAGTATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: VKRQMPARPHALPCTCFNVLTPA*TIVSVP
Trigger: TGGTACAGATACTATGGTCAAAGCTGGAGTTAGCAC...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWVIHWC*VLMLVL
Trigger: TAGCACTAACATAAGTACCAAGCACCAGTGTATTAC...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCACCCAAACAAGCCAGTaGTGGTACCTGCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRTQTSQ*WYLLPP
Trigger: AGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACAGAGACCACCTGGATTaGTTCCAAATCCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VKRQMPARPHALPCTCFNRDHLD*FQIQLY
Trigger: GTACAACTGGATTTGGAACAAATCCAGGTGGTCTCT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAAATAATCCCATGGTGTaGGTGCTTGGCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAANNPMV*VLGCPM
Trigger: CATAGGACAGCCAAGCACCAACACCATGGGATTATT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRRARHW*YQMKVH
Trigger: GTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTATTCCCACTGGTATTaGTGCCAAAACCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWYSHWY*CQNQRA
Trigger: GGCTCTTTGGTTTTGGCACAAATACCAGTGGGAATA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000650171.1
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATCCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCC +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHPILGW*FPNKDA
Trigger: GGCATCTTTGTTTGGGAACAACCAACCTAAGATTGG...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCTTCCCACAGACATGTCACATGTGACCAAGGGTTCCTGCACATAGTAGTAGCACCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCC +
Preference number: 5 (lower is better)
Translates to: ASHRHVTCDQGFLHIVVAPILGW*FPNKDA
Trigger: GGCATCTTTGTTTGGGAACAACCAACCTAAGATTGG...TGCTACTACTATGTGCAGGAACCCTTGGTCACATGTGACATGTCTGTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACCCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGCCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: ELLGKESLFSPRFRGLQQPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...CTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTTCCTTACCCAGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAGGGCAGCAGAAGCATTaGGATCTGTCAAAGCTACTG +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSGQQKH*DLSKLL
Trigger: CAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCCC...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCGGGCAGCAGAAGCATTaGGATCTGTCAAAGCTACTG +
Preference number: 5 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGGQQKH*DLSKLL
Trigger: CAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCCC...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACA +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVEYVRL*MCCWRT
Trigger: TGTTCTCCAGCAGCACATCAATAGTCTAACATACTC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACTCTGGGCTGCTGGATTaGTTGGTTTCAATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYSGLLD*LVSISL
Trigger: AAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGA...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTCAAAGAGATGTGACTaGGCTGTGCCTGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWSKRCD*AVPVVC
Trigger: ACAAACAACAGGCACAGCCAAGTCACATCTCTTTGA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATCAAAGAGATGTGACTaGGCTGTGCCTGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCESKRCD*AVPVVC
Trigger: ACAAACAACAGGCACAGCCAAGTCACATCTCTTTGA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTTCAAAGAGATGTGACTaGGCTGTGCCTGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLSKRCD*AVPVVC
Trigger: ACAAACAACAGGCACAGCCAAGTCACATCTCTTTGA...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAGGCATGAATGCTCCATaGGCTAGGGATGGTTCATCG +
Preference number: 5 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEGMNAP*ARDGSS
Trigger: CGATGAACCATCCCTAGCCAATGGAGCATTCATGCC...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTTCTTAATGCTCTTCTaGGGCATGAATGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVFLMLF*GMNAPL
Trigger: CAATGGAGCATTCATGCCCAAGAAGAGCATTAAGAA...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACAGCACTTTCTGGGGTTaGAGGAATAGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: VKRQMPARPHALPCTCFNSTFWG*RNRFGN
Trigger: ATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCT...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGGTATCATCCACACTGTaGCTGTTGCTGTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: PREWQTVPIQTRQGTSVWVSSTL*LLLCLF
Trigger: AAATAAACACAGCAACAGCAACAGTGTGGATGATAC...CCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GACCCAGGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCTCCTTCAAAATAGATaGAACCATAACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: DPGVAILPEIALTPAISCLLQNR*NHNLSD
Trigger: GTCGGAAAGGTTATGGTTCAATCTATTTTGAAGGAG...GCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACCTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCAGAGATGTTTTATCTGTaGGCCAAACTCCATCCAATG +
Preference number: 5 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAEMFYL*AKLHPM
Trigger: CATTGGATGGAGTTTGGCCAACAGATAAAACATCTC...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCTAAGTGTCGGATGATGAGCTTGTGGCAGCGGTTCCAGTGCTCAGCCTTAAATGAGATGTTTTATCTGTaGGCCAAACTCCATCCAATG +
Preference number: 5 (lower is better)
Translates to: AKCRMMSLWQRFQCSALNEMFYL*AKLHPM
Trigger: CATTGGATGGAGTTTGGCCAACAGATAAAACATCTC...ATTTAAGGCTGAGCACTGGAACCGCTGCCACAAGCTCATCATCCGACACTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGAGCTCCCTGTTTCCTaGAAACTGCTTCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLELPVS*KLLPIF
Trigger: GAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTC...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTGGTGGAGGTGCAGGTTaGCCATTAAGAGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLGGGAG*PLRAIC
Trigger: GCAGATGGCTCTTAATGGCAAACCTGCACCTCCACC...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGAAGATGCAATATGTGTaGAGGCAGACACAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: KTALKINPSVTGIHFCPKKMQYV*RQTQVP
Trigger: AGGAACCTGTGTCTGCCTCAACACATATTGCATCTT...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATTAACAGCTACTGGATaGGGCAGGAATCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAALTATG*GRNPNS
Trigger: GGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTTCTTCGCTCCAGAATTaGAATGTATTCACGGGGTTC +
Preference number: 5 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLSSLQN*NVFTGF
Trigger: GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGA...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAGGGAGGGAAGTCATGGTTTGTTTTaGCTTCTGGAAGGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: IKKSPEQVEDAASGSREGSHGLF*LLEGVD
Trigger: ATCTACCCCTTCCAGAAGCAAAAACAAACCATGACT...TCCCTCCCTGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGCCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAGTCATGGTTTGTTTTaGCTTCTGGAAGGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: LPQSWFVFASGRGRWRVGSHGLF*LLEGVD
Trigger: ATCTACCCCTTCCAGAAGCAAAAACAAACCATGACT...TCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTAGTCATGGTTTGTTTTaGCTTCTGGAAGGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: TANPENGKQCQSKQGREPSHGLF*LLEGVD
Trigger: ATCTACCCCTTCCAGAAGCAAAAACAAACCATGACT...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGTTCCTAAAGTCAGGGTaGGTTTGTTACCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: KTALKINPSVTGIHFCPKFLKSG*VCYQRA
Trigger: GGCTCTTTGGTAACAAACCAACCCTGACTTTAGGAA...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS TCA 90 bp TGTACTAGTTCCAAAGGCAGTTTTGTTCTGACCATATGCAAAGCCTaGATTAGTGGTGGAGGAGCTGAAGAGTCCTGTTGCGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: CTSSKGSFVLTICKA*ISGGGAEESCCAGS
Trigger: ACTTCCAGCGCAACAGGACTCTTCAGCTCCTCCACCACTAATTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTTTGGAACTAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 90 bp GGTATTTGTGCCAAAACCAAAGAGCCCGCCACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCTGCTTCCAAATGTAGTAAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: GICAKTKEPATGCTK*RCTGCAASKCSKLV
Trigger: AACAAGCTTACTACATTTGGAAGCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTTTTGGCACAAATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000397004.8
ENST00000529379.1
ENST00000650171.1
CDS TCA 90 bp ATTCCCAGTGAAGATGCAATATGTGTTGAGGCAGACACAGGTTCCTaGTCCTCAGGCATGCTCTCTTCTAACATGGTATCCAAAACTGGC +
Preference number: 5 (lower is better)
Translates to: IPSEDAICVEADTGS*SSGMLSSNMVSKTG
Trigger: GCCAGTTTTGGATACCATGTTAGAAGAGAGCATGCCTGAGGATCAGGAACCTGTGTCTGCCTCAACACATATTGCATCTTCACTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS GCA 90 bp GAGGCCTCCAGTATTGTTGCTAGAACCAAATGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCCAAAGCCAGTATTCTGTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: EASSIVARTKCRCSK*PSTSSAKASILSKC
Trigger: ACATTTGGACAGAATACTGGCTTTGGCACTACTAGTGGAGGGGCATTTGGAACATCTGCATTTGGTTCTAGCAACAATACTGGAGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000532475.1
ENST00000650171.1
CDS GCA 90 bp CTCGGTCATCCTGAAGTGACTCATCATGAAAAGACGTTTCTTCACTaGTTCCTTCCAGCCCATTTCGCAAAGCAGCACGCATGTTTAATG +
Preference number: 5 (lower is better)
Translates to: LGHPEVTHHEKTFLH*FLPAHFAKQHACLM
Trigger: CATTAAACATGCGTGCTGCTTTGCGAAATGGGCTGGAAGGAAGCAGTGAAGAAACGTCTTTTCATGATGAGTCACTTCAGGATGACCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAGCAATCCACCTACAAAGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: ICSIRLHSEVTLMCN*SRSLPEQSTYKEAE
Trigger: CTCTGCTTCTTTGTAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482690.1
CDS GCA 90 bp CCAGCAAGATTTTTGCTTGGCTCTATTGGCCACATATACCTGAAATaGTTCTTCATACATGCTGAGCGCCCTAGAAATGGAGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: PARFLLGSIGHIYLK*FFIHAERPRNGGCW
Trigger: CCAACAGCCTCCATTTCTAGGGCGCTCAGCATGTATGAAGAAGCATTTCAGGTATATGTGGCCAATAGAGCCAAGCAAAAATCTTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530345.1
CDS-3UTR CAA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGCTTCAAAATGAGTCTTaGTTTCAGAAAGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: KTALKINPSVTGIHFCPKLQNES*FQKARF
Trigger: GAACCGCGCTTTCTGAAACAAAGACTCATTTTGAAG...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGTCCAAATGTTGAAGTaGTGCCAAAGCCACCTGTGC +
Preference number: 5 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRVQMLK*CQSHLC
Trigger: GCACAGGTGGCTTTGGCACAACTTCAACATTTGGAC...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAAAGAGGCCTCCAGTATaGTTGCTAGAACCAAATGCA +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAKRPPV*LLEPNA
Trigger: TGCATTTGGTTCTAGCAACAATACTGGAGGCCTCTT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATATTTGCTGTTCCTGTaGACGTACCAAACCCAAAGC +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAYLLFL*TYQTQS
Trigger: GCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTGCTCCAGGTATTTGCTGTTCCTGTaGACGTACCAAACCCAAAGC +
Preference number: 5 (lower is better)
Translates to: ICSIRLHSEVTLMCNCSRYLLFL*TYQTQS
Trigger: GCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATA...CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp GAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTAC +
Preference number: 5 (lower is better)
Translates to: EWQTVPIQTRQGTSVWCEFQTRY*LFLLTY
Trigger: GTACGTCAACAGGAACAGCAAATACCTTGTTTGGAA...TTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACTTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTAC +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYFQTRY*LFLLTY
Trigger: GTACGTCAACAGGAACAGCAAATACCTTGTTTGGAA...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCCAAGATTCAGGGGTCTCCAACAGTTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTAC +
Preference number: 5 (lower is better)
Translates to: ELLGKESLFSPRFRGLQQFQTRY*LFLLTY
Trigger: GTACGTCAACAGGAACAGCAAATACCTTGTTTGGAA...CTGTTGGAGACCCCTGAATCTTGGGCTAAAGAGACTTTCCTTACCCAGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp CAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATTTTGTGCAAAGGCATaGTTTTGGGATGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: QTVPIQTRQGTSVWCEWAFCAKA*FWDEKR
Trigger: TCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAA...TGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTTTTTGTGCAAAGGCATaGTTTTGGGATGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: TANPENGKQCQSKQGREPFCAKA*FWDEKR
Trigger: TCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAA...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTAGTCTGCTGATTCTGTaGGCCAAAGAGACCACCTGG +
Preference number: 5 (lower is better)
Translates to: YATFSIKKSPEQVEDAASSLLIL*AKETTW
Trigger: CCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACT...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTCTGCTGATTCTGTaGGCCAAAGAGACCACCTGG +
Preference number: 5 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTSLLIL*AKETTW
Trigger: CCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACT...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAATAATCCCATGGTGTaGGTGCTTGGCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSNNPMV*VLGCPM
Trigger: CATAGGACAGCCAAGCACCAACACCATGGGATTATT...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGCACCAAATCCAGTATaGGTCTGCCCAAAGAGACCT +
Preference number: 5 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSAPNPV*VCPKRP
Trigger: AGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSVVSLL*PNRVEP
Trigger: TGGTTCGACCCTGTTTGGCAATAACAAGCTTACTAC...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCATATTCCCACTGGTATTaGTGCCAAAACCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSYSHWY*CQNQRA
Trigger: GGCTCTTTGGTTTTGGCACAAATACCAGTGGGAATA...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000650171.1
CDS-3UTR CAA 90 bp GCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACA +
Preference number: 5 (lower is better)
Translates to: AGTKTALKINPSVTGIHFEYVRL*MCCWRT
Trigger: TGTTCTCCAGCAGCACATCAATAGTCTAACATACTC...GAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACA +
Preference number: 5 (lower is better)
Translates to: RWRVGNALELTWDEQGGLEYVRL*MCCWRT
Trigger: TGTTCTCCAGCAGCACATCAATAGTCTAACATACTC...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCATCTGGGCTGCTGGATTaGTTGGTTTCAATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAASGLLD*LVSISL
Trigger: AAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGA...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGGCATGAATGCTCCATaGGCTAGGGATGGTTCATCG +
Preference number: 5 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRGMNAP*ARDGSS
Trigger: CGATGAACCATCCCTAGCCAATGGAGCATTCATGCC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GGTGTGGCCATATTGCCTGAGATAGCCCTAACACCAGCTATCTCATGCCATTACTTCTTAATGCTCTTCTaGGGCATGAATGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: GVAILPEIALTPAISCHYFLMLF*GMNAPL
Trigger: CAATGGAGCATTCATGCCCAAGAAGAGCATTAAGAA...GTAATGGCATGAGATAGCTGGTGTTAGGGCTATCTCAGGCAATATGGCCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGACAGAGTCTCAGCAAGACTGAAAACCAGGGACCAAACCAAACTCTGGGAGCTTTCTTAATGCTCTTCTaGGGCATGAATGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: RQSLSKTENQGPNQTLGAFLMLF*GMNAPL
Trigger: CAATGGAGCATTCATGCCCAAGAAGAGCATTAAGAA...AGCTCCCAGAGTTTGGTTTGGTCCCTGGTTTTCAGTCTTGCTGAGACTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTGTATCATCCACACTGTaGCTGTTGCTGTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVVSSTL*LLLCLF
Trigger: AAATAAACACAGCAACAGCAACAGTGTGGATGATAC...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp ACAGCCAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTCCTTCAAAATAGATaGAACCATAACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: TANPENGKQCQSKQGREPLLQNR*NHNLSD
Trigger: GTCGGAAAGGTTATGGTTCAATCTATTTTGAAGGAG...AGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTCTCCTTCAAAATAGATaGAACCATAACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: PARPHALPCTCFNVIANVLLQNR*NHNLSD
Trigger: GTCGGAAAGGTTATGGTTCAATCTATTTTGAAGGAG...AACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGAGATGTTTTATCTGTaGGCCAAACTCCATCCAATG +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHEMFYL*AKLHPM
Trigger: CATTGGATGGAGTTTGGCCAACAGATAAAACATCTC...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATGGTGGAGGTGCAGGTTaGCCATTAAGAGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDGGGAG*PLRAIC
Trigger: GCAGATGGCTCTTAATGGCAAACCTGCACCTCCACC...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAAAGATGCAATATGTGTaGAGGCAGACACAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: RMVNCLLFWVPEALMLRSKMQYV*RQTQVP
Trigger: AGGAACCTGTGTCTGCCTCAACACATATTGCATCTT...TGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGAGGGCCTCTAAGTGCTaGTCAGATTCCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQRASKC*SDSMCA
Trigger: AGCACACATGGAATCTGACAAGCACTTAGAGGCCCT...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524563.1
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGGAATACCCTGGTTCTTaGGGGGATTCTGCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQEYPGS*GDSAKG
Trigger: TCCTTTGGCAGAATCCCCCAAAGAACCAGGGTATTC...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGCCCTAAGCAGAAAGATCCCATTTaGTTTCCTAACTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: KTALKINPSVTGIHFCPKQKDPI*FPNSGQ
Trigger: TTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTG...CTTAGGGCAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS TCA 90 bp TGTAACACTGAATCTGCTCTATCCGACTGCACAGTGAAGTCACTTTaGTGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTACA +
Preference number: 5 (lower is better)
Translates to: CNTESALSDCTVKSL*CVTAPGHYLSNPPT
Trigger: TGTAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGATAGAGCAGATTCAGTGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482690.1
CDS TCA 90 bp AACACCCAGCAAGATTTTTGCTTGGCTCTATTGGCCACATATACCTaGAATGCTTCTTCATACATGCTGAGCGCCCTAGAAATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: NTQQDFCLALLATYT*NASSYMLSALEMEA
Trigger: AGCCTCCATTTCTAGGGCGCTCAGCATGTATGAAGAAGCATTTCAGGTATATGTGGCCAATAGAGCCAAGCAAAAATCTTGCTGGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530345.1
CDS GCA 90 bp TTTGTGCAAAGGCATTGTTTTGGGATGAGAAGAGACTGGTCCCTGTaGTTGCAGTTCCAAACAAGGTATTTGCTGTTCCTGTTGACGTAC +
Preference number: 5 (lower is better)
Translates to: FVQRHCFGMRRDWSL*LQFQTRYLLFLLTY
Trigger: GTACGTCAACAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 90 bp AAAGGTGAGTATGTTAGACTATTGATGTGCTGCTGGAGAACAGCCTaGTGGGCAGCAGAAGCATTTGGATCTGTCAAAGCTGTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: KGEYVRLLMCCWRTA*WAAEAFGSVKAVPN
Trigger: ATTTGGAACAGCTTTGACAGATCCAAATGCTTCTGCTGCCCAGCAGGCTGTTCTCCAGCAGCACATCAATAGTCTAACATACTCACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529379.1
CDS CCA 90 bp GAAGAGGCTGGTAGTCTGCTGATTCTGTTGGCCAAAGAGACCACCTaGATTTGTTCCAAATCCAGTTGTACTAGTTCCAAAGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: EEAGSLLILLAKETT*ICSKSSCTSSKGSF
Trigger: AAAACTGCCTTTGGAACTAGTACAACTGGATTTGGAACAAATCCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGTCCAAATGTTGAAGTaGTGCCAAAGCCACCTGTGC +
Preference number: 5 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRVQMLK*CQSHLC
Trigger: GCACAGGTGGCTTTGGCACAACTTCAACATTTGGAC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATGTCCAAATGTTGAAGTaGTGCCAAAGCCACCTGTGC +
Preference number: 5 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDVQMLK*CQSHLC
Trigger: GCACAGGTGGCTTTGGCACAACTTCAACATTTGGAC...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAAAGAGGCCTCCAGTATaGTTGCTAGAACCAAATGCA +
Preference number: 5 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVKRPPV*LLEPNA
Trigger: TGCATTTGGTTCTAGCAACAATACTGGAGGCCTCTT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTATTTTGTGCAAAGGCATaGTTTTGGGATGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: RWRVGNALELTWDEQGGLFCAKA*FWDEKR
Trigger: TCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAA...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTTTTTGTGCAAAGGCATaGTTTTGGGATGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLFCAKA*FWDEKR
Trigger: TCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAA...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTAAATTGCCAAAGCCAGTaGGTTTATTTTGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: RWRVGNALELTWDEQGGLNCQSQ*VYFVQR
Trigger: CCTTTGCACAAAATAAACCAACTGGCTTTGGCAATT...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCTCAGTCATGGTTTGTTTTTGCTTCTGGAAGGGGTAGATGGAGGGTGGGAAATGTACTGGTTCCAAAATaGCCAAAGCCAGTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: PQSWFVFASGRGRWRVGNVLVPK*PKPVGL
Trigger: TAAACCAACTGGCTTTGGCAATTTTGGAACCAGTAC...ATTTCCCACCCTCCATCTACCCCTTCCAGAAGCAAAAACAAACCATGACTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTCTGGTACTGGTTCCAAAATaGCCAAAGCCAGTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: RNKNSPEDQSLRDRHSLLVLVPK*PKPVGL
Trigger: TAAACCAACTGGCTTTGGCAATTTTGGAACCAGTAC...CAGAAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAAGAGACCACCTGGATTaGTTCCAAATCCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVRDHLD*FQIQLY
Trigger: GTACAACTGGATTTGGAACAAATCCAGGTGGTCTCT...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACCCATGGTGTTGGTGCTaGGCTGTCCTATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNPWCWC*AVLWCW
Trigger: CCAGCACCATAGGACAGCCAAGCACCAACACCATGG...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGAATAATCCCATGGTGTaGGTGCTTGGCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQNNPMV*VLGCPM
Trigger: CATAGGACAGCCAAGCACCAACACCATGGGATTATT...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp CTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: LFWVPEALMLRSVLRKALVVSLL*PNRVEP
Trigger: TGGTTCGACCCTGTTTGGCAATAACAAGCTTACTAC...CAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCACCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAAPNVVS*LLPNRV
Trigger: GACCCTGTTTGGCAATAACAAGCTTACTACATTTGG...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCATATTCCCACTGGTATTaGTGCCAAAACCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSYSHWY*CQNQRA
Trigger: GGCTCTTTGGTTTTGGCACAAATACCAGTGGGAATA...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397004.8
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCACCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTGGTGTGAATGGGCATGTATCATCCACACTGTaGCTGTTGCTGTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: KQCQSKQGREPLCGVNGHVSSTL*LLLCLF
Trigger: AAATAAACACAGCAACAGCAACAGTGTGGATGATAC...ATGCCCATTCACACCACACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGGTTCCTGCACATAGTAGTAGCAAAGGTATGGTGTTCATGGAACTCTAAAGGCAAGATGCAATATGTGTaGAGGCAGACACAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: GFLHIVVAKVWCSWNSKGKMQYV*RQTQVP
Trigger: AGGAACCTGTGTCTGCCTCAACACATATTGCATCTT...GCCTTTAGAGTTCCATGAACACCATACCTTTGCTACTACTATGTGCAGGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAACCCAGAGAATGGCAAACAGTGCCAATCCAAACAAGGCAGGGAACCTCTGTGTTCATCTGGCTTTCTTaGTCTCAAACTGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: QPREWQTVPIQTRQGTSVFIWLS*SQTEFF
Trigger: GAAAAACTCAGTTTGAGACAAAGAAAGCCAGATGAA...CACAGAGGTTCCCTGCCTTGTTTGGATTGGCACTGTTTGCCATTCTCTGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AGGATAGCCAGCGGGAGAAAGCTCTTCTTCGCTCCAGAATTTGAATGTATTCACTCTTCGCTCCAGAATTaGAATGTATTCACGGGGTTC +
Preference number: 5 (lower is better)
Translates to: RIASGRKLFFAPEFECIHSSLQN*NVFTGF
Trigger: GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGA...GTGAATACATTCAAATTCTGGAGCGAAGAAGAGCTTTCTCCCGCTGGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACACAGTGAAGTCACTTaGATGTGTAACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRHSEVT*MCNCSR
Trigger: CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp ACTCCCCAAATAGAGAGCTTGTTCTCAGAACAGGTACTGAGGAGAAACACAAGACACAGTGAAGTCACTTaGATGTGTAACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TPQIESLFSEQVLRRNTRHSEVT*MCNCSR
Trigger: CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTG...TCTTGTGTTTCTCCTCAGTACCTGTTCTGAGAACAAGCTCTCTATTTGGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533346.5
CDS-3UTR CAA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCCAGGCCAACCCTCCTTaGCCTCCAAAATTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLQANPP*PPKFSV
Trigger: AACACTGAATTTTGGAGGCAAAGGAGGGTTGGCCTG...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCATTCCTAAAGTCAGGGTaGGTTTGTTACCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSFLKSG*VCYQRA
Trigger: GGCTCTTTGGTAACAAACCAACCCTGACTTTAGGAA...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397007.8
CDS-3UTR CAA 90 bp GTAAAAAGACAGATGCCTGCAAGACCTCACGCCCTCCCTTGCACTTGTTTCAACCGTGATTGCCAATGTTaGTACTCTTCAAAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: VKRQMPARPHALPCTCFNRDCQC*YSSKFQ
Trigger: TTGGAACTTTGAAGAGTACAAACATTGGCAATCACG...GTTGAAACAAGTGCAAGGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAACGCCCTCCCTTGCACTaGTTTCAACGTGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQRPPLH*FQRDCQ
Trigger: TTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCG...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS TCA 90 bp GCCAAAGCCAGTTGGTTTATTTTGTGCAAAGGCATTGTTTTGGGATaGGAAGAGACTGGTCCCTGTGCTTGCAGTTCCAAACAAGGTATT +
Preference number: 5 (lower is better)
Translates to: AKASWFILCKGIVLG*EETGPCACSSKQGI
Trigger: AATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAATAAACCAACTGGCTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 90 bp ACCAGTTTCAGGCCGGTATTCTTTGAATTGAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCCTTCATAGTTGATATCAGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: TSFRPVFFELSSLFP*NCFQSSFIVDISKA
Trigger: CGCCTTGCTGATATCAACTATGAAGGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTCAATTCAAAGAATACCGGCCTGAAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 90 bp GGGTGTCAGTTTATAATGAGTAGGTGTAGTAAGAGCCTTCTGGGCTaGTGGATTTGTTGGTTTCAATCTCTCTTCCTTCTTCTTAGGGTC +
Preference number: 5 (lower is better)
Translates to: GCQFIMSRCSKSLLG*WICWFQSLFLLLRV
Trigger: GACCCTAAGAAGAAGGAAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTTACTACACCTACTCATTATAAACTGACACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000527104.5
ENST00000529379.1
ENST00000650171.1
CDS CCA 90 bp GTTAAATTTAATAGTAGTCCCAGTAGGAGCAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGATGTGCTGCCAAAAGGATTAGAGGT +
Preference number: 5 (lower is better)
Translates to: VKFNSSPSRSSCKTT*PKEGARCAAKRIRG
Trigger: ACCTCTAATCCTTTTGGCAGCACATCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCTGCTCCTACTGGGACTACTATTAAATTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 90 bp CAGACCAAGAGGATGTGGATGGGATATTCATTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCACAGAGACACTTGGTGAAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QTKRMWMGYSLKMLL*EYDILAQRHLVKEK
Trigger: CTTTTCTTTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAATGAATATCCCATCCACATCCTCTTGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTACTTCAAAATGAGTCTTaGTTTCAGAAAGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVLQNES*FQKARF
Trigger: GAACCGCGCTTTCTGAAACAAAGACTCATTTTGAAG...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGTCCAAATGTTGAAGTaGTGCCAAAGCCACCTGTGC +
Preference number: 5 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQVQMLK*CQSHLC
Trigger: GCACAGGTGGCTTTGGCACAACTTCAACATTTGGAC...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAGAGGCCTCCAGTATaGTTGCTAGAACCAAATGCA +
Preference number: 5 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRKRPPV*LLEPNA
Trigger: TGCATTTGGTTCTAGCAACAATACTGGAGGCCTCTT...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTAC +
Preference number: 5 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVFQTRY*LFLLTY
Trigger: GTACGTCAACAGGAACAGCAAATACCTTGTTTGGAA...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGGCAGCAAATTGCCAAAGCCAGTaGGTTTATTTTGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: RSVLRKALNKWRMLLLAANCQSQ*VYFVQR
Trigger: CCTTTGCACAAAATAAACCAACTGGCTTTGGCAATT...TGCTGCCAGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAGTACTGGTTCCAAAATaGCCAAAGCCAGTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSVLVPK*PKPVGL
Trigger: TAAACCAACTGGCTTTGGCAATTTTGGAACCAGTAC...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGGTGCTAACTCCAGCTTaGACCATAGTATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKVLTPA*TIVSVP
Trigger: TGGTACAGATACTATGGTCAAAGCTGGAGTTAGCAC...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACACCCAAACAAGCCAGTaGTGGTACCTGCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNTQTSQ*WYLLPP
Trigger: AGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGT...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAGAGACCACCTGGATTaGTTCCAAATCCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRRDHLD*FQIQLY
Trigger: GTACAACTGGATTTGGAACAAATCCAGGTGGTCTCT...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAGTCTGCTGATTCTGTaGGCCAAAGAGACCACCTGG +
Preference number: 5 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHSLLIL*AKETTW
Trigger: CCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACT...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATAATAATCCCATGGTGTaGGTGCTTGGCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDNNPMV*VLGCPM
Trigger: CATAGGACAGCCAAGCACCAACACCATGGGATTATT...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATGCACCAAATCCAGTATaGGTCTGCCCAAAGAGACCT +
Preference number: 5 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDAPNPV*VCPKRP
Trigger: AGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGC...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AGCCCAGTTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: SPVPRVPGAGLLPKILFPPNVVS*LLPNRV
Trigger: GACCCTGTTTGGCAATAACAAGCTTACTACATTTGG...TGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGCCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWPNVVS*LLPNRV
Trigger: GACCCTGTTTGGCAATAACAAGCTTACTACATTTGG...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTRARHW*YQMKVH
Trigger: GTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCT...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCC +
Preference number: 5 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKPILGW*FPNKDA
Trigger: GGCATCTTTGTTTGGGAACAACCAACCTAAGATTGG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGCCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: KLSPLLGSRSPYATFSIKPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...CTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTCTGGGCTGCTGGATTaGTTGGTTTCAATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSSGLLD*LVSISL
Trigger: AAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGTTCTTAATGCTCTTCTaGGGCATGAATGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWFLMLF*GMNAPL
Trigger: CAATGGAGCATTCATGCCCAAGAAGAGCATTAAGAA...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp AGATGGAGGGTGGGAAATGCTTTGGAGCTAACATGGGATGAACAGGGAGGGTTATTCTCATCAACAGGTTaGCTTAGGAAACTAAATCTC +
Preference number: 5 (lower is better)
Translates to: RWRVGNALELTWDEQGGLFSSTG*LRKLNL
Trigger: GAGATTTAGTTTCCTAAGCAAACCTGTTGATGAGAA...TAACCCTCCCTGTTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCTCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGCAGGAACAAAAACAGCCCTGAAGATCAATCCCTCCGTGACAGGCATTCACTTTTCTCATCAACAGGTTaGCTTAGGAAACTAAATCTC +
Preference number: 5 (lower is better)
Translates to: GRNKNSPEDQSLRDRHSLFSSTG*LRKLNL
Trigger: GAGATTTAGTTTCCTAAGCAAACCTGTTGATGAGAA...AAGTGAATGCCTGTCACGGAGGGATTGATCTTCAGGGCTGTTTTTGTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGCACTTTCTGGGGTTaGAGGAATAGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSSTFWG*RNRFGN
Trigger: ATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCT...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGCACTCTCCTTTTTCATaGGTAATTTTAGCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWHSPFS*VILARS
Trigger: TGACCTTGCTAAAATTACCAATGAAAAAGGAGAGTG...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTGGATCCATTTGGCAGGTACACGGAGCTTCTGGGTAAGGAAAGTCTCTTTAGCCACTCTCCTTTTTCATaGGTAATTTTAGCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VDPFGRYTELLGKESLFSHSPFS*VILARS
Trigger: TGACCTTGCTAAAATTACCAATGAAAAAGGAGAGTG...GCTAAAGAGACTTTCCTTACCCAGAAGCTCCGTGTACCTGCCAAATGGATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGAGATGTTTTATCTGTaGGCCAAACTCCATCCAATG +
Preference number: 5 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVEMFYL*AKLHPM
Trigger: CATTGGATGGAGTTTGGCCAACAGATAAAACATCTC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAGAGATGTTTTATCTGTaGGCCAAACTCCATCCAATG +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSEMFYL*AKLHPM
Trigger: CATTGGATGGAGTTTGGCCAACAGATAAAACATCTC...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAGAGCTCCCTGTTTCCTaGAAACTGCTTCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRELPVS*KLLPIF
Trigger: GAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTC...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCGAGCTCCCTGTTTCCTaGAAACTGCTTCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRELPVS*KLLPIF
Trigger: GAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTC...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACGGTGGAGGTGCAGGTTaGCCATTAAGAGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNGGGAG*PLRAIC
Trigger: GCAGATGGCTCTTAATGGCAAACCTGCACCTCCACC...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTCTCATTAATGATGGCATCAGAAGCTAAGTGTCGGATGATGAGCTTGTGGCAGAAGATGCAATATGTGTaGAGGCAGACACAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: FSLMMASEAKCRMMSLWQKMQYV*RQTQVP
Trigger: AGGAACCTGTGTCTGCCTCAACACATATTGCATCTT...CTGCCACAAGCTCATCATCCGACACTTAGCTTCTGATGCCATCATTAATGAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp GCATGGAGGGTCACAAGATCCAGAATGGCTAGGGATGGAAAAAGAATACCCTGGTTCATCTGGCTTTCTTaGTCTCAAACTGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: AWRVTRSRMARDGKRIPWFIWLS*SQTEFF
Trigger: GAAAAACTCAGTTTGAGACAAAGAAAGCCAGATGAA...CCAGGGTATTCTTTTTCCATCCCTAGCCATTCTGGATCTTGTGACCCTCCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTTCTTCGCTCCAGAATTaGAATGTATTCACGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SPYATFSIKKSPEQVEDASSLQN*NVFTGF
Trigger: GAACCCCGTGAATACATTCAAATTCTGGAGCGAAGA...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCACAGTGAAGTCACTTaGATGTGTAACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLHSEVT*MCNCSR
Trigger: CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTG...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGACACAGTGAAGTCACTTaGATGTGTAACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRHSEVT*MCNCSR
Trigger: CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTG...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTCAGAAAGATCCCATTTaGTTTCCTAACTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPQKDPI*FPNSGQ
Trigger: TTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTG...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AATCCTGCACCAAGCCCAGTTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAATTAGAAGTGTTTGTATaGGTTCCTAAAGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: NPAPSPVPRVPGAGLLPKLEVFV*VPKVRV
Trigger: AACCCTGACTTTAGGAACCAATACAAACACTTCTAA...TTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAACTGGGCTTGGTGCAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp TTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTGGTATTCTGGGCTGCTGGATTaGTTGGTTTCAATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FQESQVLVYFQKYYSHWYSGLLD*LVSISS
Trigger: GGAAGAGATTGAAACCAACAAATCCAGCAGCCCAGA...ATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS TCA 90 bp GAGCTCCCTGTTTCCTTGAAACTGCTTCCAATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTGGGCTCTTTATTAAACAACGAGATG +
Preference number: 5 (lower is better)
Translates to: ELPVSLKLLPIFLHS*YQQGDLGSLLNNEM
Trigger: CATCTCGTTGTTTAATAAAGAGCCCAGATCGCCTTGCTGATATCAACTATGAAGGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 90 bp AAGCAGCACGCATGTTTAATGCAACAATGGTATCATCCACACTGTTaGTGTTGCTGTGTTTATTTCCAGCACTTTCTGGGGTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KQHACLMQQWYHPHC*CCCVYFQHFLGFEE
Trigger: TTCCTCAAACCCCAGAAAGTGCTGGAAATAAACACAGCAACAGCAACAGTGTGGATGATACCATTGTTGCATTAAACATGCGTGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 90 bp TTGGTTTATTTTGTGCAAAGGCATTGTTTTGGGATGAGAAGAGACTaGTCCCTGTGCTTGCAGTTCCAAACAAGGTATTTGCTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LVYFVQRHCFGMRRD*SLCLQFQTRYLLFL
Trigger: CAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAATAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 90 bp TTAGGCAAGAGGATGTGGATGGGATATTCATTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCACAGAGACACTTGGTGAAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LGKRMWMGYSLKMLL*EYDILAQRHLVKEK
Trigger: CTTTTCTTTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAATGAATATCCCATCCACATCCTCTTGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429801.5
CDS-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGACTTCAAAATGAGTCTTaGTTTCAGAAAGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRLQNES*FQKARF
Trigger: GAACCGCGCTTTCTGAAACAAAGACTCATTTTGAAG...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGTCCAAATGTTGAAGTaGTGCCAAAGCCACCTGTGC +
Preference number: 5 (lower is better)
Translates to: VIANVCTLQSSKGHKTALVQMLK*CQSHLC
Trigger: GCACAGGTGGCTTTGGCACAACTTCAACATTTGGAC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTAGGCCTCCAGTATTGTaGCTAGAACCAAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: LMLRSVLRKALNKWRMLLRPPVL*LEPNAD
Trigger: ATCTGCATTTGGTTCTAGCAACAATACTGGAGGCCT...AAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: VIANVCTLQSSKGHKTALDWSLC*QFQTRY
Trigger: ATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TGCCCTAAGTGTGTCAGAAAGATCCCATTTTGTTTCCTAACTCAGGCCAACCCTAATTGCCAAAGCCAGTaGGTTTATTTTGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: CPKCVRKIPFCFLTQANPNCQSQ*VYFVQR
Trigger: CCTTTGCACAAAATAAACCAACTGGCTTTGGCAATT...AGGGTTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTGACACACTTAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAATTGCCAAAGCCAGTaGGTTTATTTTGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSNCQSQ*VYFVQR
Trigger: CCTTTGCACAAAATAAACCAACTGGCTTTGGCAATT...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGTACTGGTTCCAAAATaGCCAAAGCCAGTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAVLVPK*PKPVGL
Trigger: TAAACCAACTGGCTTTGGCAATTTTGGAACCAGTAC...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCGTACTGGTTCCAAAATaGCCAAAGCCAGTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSVLVPK*PKPVGL
Trigger: TAAACCAACTGGCTTTGGCAATTTTGGAACCAGTAC...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp ATGGTAAACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTAGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: MVNCLLFWVPEALMLRSVVIHWC*VLMLVL
Trigger: TAGCACTAACATAAGTACCAAGCACCAGTGTATTAC...TACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTTTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATAGAGACCACCTGGATTaGTTCCAAATCCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDRDHLD*FQIQLY
Trigger: GTACAACTGGATTTGGAACAAATCCAGGTGGTCTCT...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDVVSLL*PNRVEP
Trigger: TGGTTCGACCCTGTTTGGCAATAACAAGCTTACTAC...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCCAAGAGTCCCAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTGGTATGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: FQESQVLVYFQKYYSHWYVVSLL*PNRVEP
Trigger: TGGTTCGACCCTGTTTGGCAATAACAAGCTTACTAC...ATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTGGGACTCTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp GTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCAACCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: VWCSWNSKGRNKNSPEDQPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...TTGATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACACCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCAGCACTTTCTGGGGTTaGAGGAATAGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRSTFWG*RNRFGN
Trigger: ATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCT...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTGATGTGTAACTGCTCCAGGTCATTACCTGAGCAATCCACCTGCTGTATATGGCTCCTTCAAAATAGATaGAACCATAACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: LMCNCSRSLPEQSTCCIWLLQNR*NHNLSD
Trigger: GTCGGAAAGGTTATGGTTCAATCTATTTTGAAGGAG...CCATATACAGCAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp TATATGGCGGAGCATTTCAATGACTCTAATATAGTCCAGGTAAACAAGCCCAGAAGGGTGGGAAATGCTTaGGAGCTAACATGGGATGAA +
Preference number: 5 (lower is better)
Translates to: YMAEHFNDSNIVQVNKPRRVGNA*ELTWDE
Trigger: TTCATCCCATGTTAGCTCCAAAGCATTTCCCACCCT...TCTGGGCTTGTTTACCTGGACTATATTAGAGTCATTGAAATGCTCCGCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAACCTCACGCCCTCCCTaGCACTTGTTTCAACGTGAT +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTTSRPP*HLFQRD
Trigger: ATCACGTTGAAACAAGTGCAAGGGAGGGCGTGAGGT...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS TCA 90 bp TTTGTTCCAAATCCAGTTGTACTAGTTCCAAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAATTAGTGGTGGAGGAGCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: FVPNPVVLVPKAVLF*PYAKPELVVEELKS
Trigger: ACTCTTCAGCTCCTCCACCACTAATTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTTTGGAACTAGTACAACTGGATTTGGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 90 bp AAACAGGAAGAAAGTGGAGTTTATGAATCAACAGCCCTAAGAATCTaGCTCTGGCATGCCTTAAGATCCTCTCCTACTACATGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: KQEESGVYESTALRI*LWHALRSSPTTCWC
Trigger: ACACCAACATGTAGTAGGAGAGGATCTTAAGGCATGCCAGAGTCAGATTCTTAGGGCTGTTGATTCATAAACTCCACTTTCTTCCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488828.1
CDS-3UTR CAA 90 bp TTTCAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATAAGAGGCCTCCAGTATaGTTGCTAGAACCAAATGCA +
Preference number: 5 (lower is better)
Translates to: FQQLRGRGCFTKKSRINDKRPPV*LLEPNA
Trigger: TGCATTTGGTTCTAGCAACAATACTGGAGGCCTCTT...ATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AACTGTCTCCTCTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: NCLLFWVPEALMLRSVLRVIHWC*VLMLVL
Trigger: TAGCACTAACATAAGTACCAAGCACCAGTGTATTAC...TCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAGAGGAGACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCACCAAATCCAGTATaGGTCTGCCCAAAGAGACCT +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTAPNPV*VCPKRP
Trigger: AGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGC...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAGGTATGGTGTTCATGGAACTCTAAAGGCAGGAACAAAAACAGCCCTGAAGATCCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: KVWCSWNSKGRNKNSPEDPNVVS*LLPNRV
Trigger: GACCCTGTTTGGCAATAACAAGCTTACTACATTTGG...ATCTTCAGGGCTGTTTTTGTTCCTGCCTTTAGAGTTCCATGAACACCATACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATGGGCAGCAGAAGCATTaGGATCTGTCAAAGCTACTG +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNGQQKH*DLSKLL
Trigger: CAGTAGCTTTGACAGATCCAAATGCTTCTGCTGCCC...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACA +
Preference number: 5 (lower is better)
Translates to: YATFSIKKSPEQVEDAASEYVRL*MCCWRT
Trigger: TGTTCTCCAGCAGCACATCAATAGTCTAACATACTC...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGGGCTGCTGGATTTGTaGGTTTCAATCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VIANVCTLQSSKGHKTALGLLDL*VSISLP
Trigger: AGGAAGAGAGATTGAAACCAACAAATCCAGCAGCCC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATCTGGGCTGCTGGATTaGTTGGTTTCAATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQSGLLD*LVSISL
Trigger: AAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCAGATTCTTAATGCTCTTCTaGGGCATGAATGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: KTLNDLEDGKLSPLLGSRFLMLF*GMNAPL
Trigger: CAATGGAGCATTCATGCCCAAGAAGAGCATTAAGAA...TCTGGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TCACGCCCTCCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCATTCTCATCAACAGGTTaGCTTAGGAAACTAAATCTC +
Preference number: 5 (lower is better)
Translates to: SRPPLHLFQRDCQCLYSSFSSTG*LRKLNL
Trigger: GAGATTTAGTTTCCTAAGCAAACCTGTTGATGAGAA...TGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGGAGGGCGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAAGTATCATCCACACTGTaGCTGTTGCTGTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEVSSTL*LLLCLF
Trigger: AAATAAACACAGCAACAGCAACAGTGTGGATGATAC...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTCACAGTGAAGTCACTTaGATGTGTAACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPHSEVT*MCNCSR
Trigger: CCTGGAGCAGTTACACATCAAAGTGACTTCACTGTG...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATAAAGTCAGGGTTGGTTaGTTACCAAAGAGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNKVRVG*LPKSPP
Trigger: TGGCGGGCTCTTTGGTAACAAACCAACCCTGACTTT...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397007.8
CDS-3UTR CAA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATTATTTGCTGTTCCTGTaGACGTACCAAACCCAAAGC +
Preference number: 5 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHYLLFL*TYQTQS
Trigger: GCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATA...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CCCTTGCACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAATTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTAC +
Preference number: 5 (lower is better)
Translates to: PLHLFQRDCQCLYSSKFQFQTRY*LFLLTY
Trigger: GTACGTCAACAGGAACAGCAAATACCTTGTTTGGAA...TTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGTGCAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CAGCAGCTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAATTGCCAAAGCCAGTaGGTTTATTTTGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: QQLRGRGCFTKKSRINDTNCQSQ*VYFVQR
Trigger: CCTTTGCACAAAATAAACCAACTGGCTTTGGCAATT...TGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATCCAATCTTAGGTTGGTaGTTCCCAAACAAAGATGCC +
Preference number: 5 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHPILGW*FPNKDA
Trigger: GGCATCTTTGTTTGGGAACAACCAACCTAAGATTGG...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGGTTTACTTCCAAAAATACTATTCCCACTGGTATTTGTGCCAAAACCTGAGACCCTCCAATCTTAGGTaGGTTGTTCCCAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: LVYFQKYYSHWYLCQNLRPSNLR*VVPKQR
Trigger: TCTTTGTTTGGGAACAACCAACCTAAGATTGGAGGG...TCTCAGGTTTTGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397013.2
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACGGGCTGCTGGATTTGTaGGTTTCAATCTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNGLLDL*VSISLP
Trigger: AGGAAGAGAGATTGAAACCAACAAATCCAGCAGCCC...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTTTCTCATCAACAGGTTaGCTTAGGAAACTAAATCTC +
Preference number: 5 (lower is better)
Translates to: SPYATFSIKKSPEQVEDAFSSTG*LRKLNL
Trigger: GAGATTTAGTTTCCTAAGCAAACCTGTTGATGAGAA...AGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATTCTCATCAACAGGTTaGCTTAGGAAACTAAATCTC +
Preference number: 5 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEFSSTG*LRKLNL
Trigger: GAGATTTAGTTTCCTAAGCAAACCTGTTGATGAGAA...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TATGCTACGTTCAGTATTAAGAAAAGCCCTGAACAAGTGGAGGATGCTGCTTCTCTCCTTCAAAATAGATaGAACCATAACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: YATFSIKKSPEQVEDAASLLQNR*NHNLSD
Trigger: GTCGGAAAGGTTATGGTTCAATCTATTTTGAAGGAG...AGAAGCAGCATCCTCCACTTGTTCAGGGCTTTTCTTAATACTGAACGTAGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATTCATCTGGCTTTCTTaGTCTCAAACTGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLGSRSPYATFSIKKSPEFIWLS*SQTEFF
Trigger: GAAAAACTCAGTTTGAGACAAAGAAAGCCAGATGAA...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp GGAAAAACACTGAATGATCTTGAGGATGGTAAACTGTCTCCTCTTCTGGGTTCCTTCATCTGGCTTTCTTaGTCTCAAACTGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GKTLNDLEDGKLSPLLGSFIWLS*SQTEFF
Trigger: GAAAAACTCAGTTTGAGACAAAGAAAGCCAGATGAA...GGAACCCAGAAGAGGAGACAGTTTACCATCCTCAAGATCATTCAGTGTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTCTGGGTTCCAGAAGCCCTTATGCTACGTTCAGTATTAAGAAAAGCCCTGAATTAGAAGTGTTTGTATaGGTTCCTAAAGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: LLGSRSPYATFSIKKSPELEVFV*VPKVRV
Trigger: AACCCTGACTTTAGGAACCAATACAAACACTTCTAA...TTCAGGGCTTTTCTTAATACTGAACGTAGCATAAGGGCTTCTGGAACCCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS TCA 90 bp CATATGGTAAGAATTATTTTCTATTTCTTCTCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGTTTCTTCACTGCTTCCTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: HMVRIIFYFFSVILK*LIMKRRFFTASFQP
Trigger: GGGCTGGAAGGAAGCAGTGAAGAAACGTCTTTTCATGATGAGTCACTTCAGGATGACCGAGAAGAAATAGAAAATAATTCTTACCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 90 bp CAAGAACCCCTTCAGGTAGTCATAGTTCTCATTAATGATGGCATCTaGAGAAACAAAGTATTGAGCACAATGTCTGCACAAGTGCATAGT +
Preference number: 5 (lower is better)
Translates to: QEPLQVVIVLINDGI*RNKVLSTMSAQVHS
Trigger: ACTATGCACTTGTGCAGACATTGTGCTCAATACTTTGTTTCTTCAGATGCCATCATTAATGAGAACTATGACTACCTGAAGGGGTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469881.1
CDS GCA 90 bp GATGGGATATTCATTAAAGATGCTGCTCTGGGAGTACGACATTCTTaGACAGAGACACTTGGTGAAAGAAAAGCTCCACTTGTAAATTTT +
Preference number: 5 (lower is better)
Translates to: DGIFIKDAALGVRHS*TETLGERKAPLVNF
Trigger: AAAATTTACAAGTGGAGCTTTTCTTTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAATGAATATCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS CCA 90 bp ATCATCCACACTGTTGCTGTTGCTGTGTTTATTTCCAGCACTTTCTaGGGTTTGAGGAATAGGTTTGGCAATAGGGTTAGTATAAAAATG +
Preference number: 5 (lower is better)
Translates to: IIHTVAVAVFISSTF*GLRNRFGNRVSIKM
Trigger: CATTTTTATACTAACCCTATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAATAAACACAGCAACAGCAACAGTGTGGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACAGGCCTCCAGTATTGTaGCTAGAACCAAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNRPPVL*LEPNAD
Trigger: ATCTGCATTTGGTTCTAGCAACAATACTGGAGGCCT...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp ACTTGTTTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATGTACTGGTTCCAAAATaGCCAAAGCCAGTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: TCFNVIANVCTLQSSKGHVLVPK*PKPVGL
Trigger: TAAACCAACTGGCTTTGGCAATTTTGGAACCAGTAC...ATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGTGCTAACTCCAGCTTaGACCATAGTATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTVLTPA*TIVSVP
Trigger: TGGTACAGATACTATGGTCAAAGCTGGAGTTAGCAC...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACAGAGACCACCTGGATTaGTTCCAAATCCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNRDHLD*FQIQLY
Trigger: GTACAACTGGATTTGGAACAAATCCAGGTGGTCTCT...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNVVSLL*PNRVEP
Trigger: TGGTTCGACCCTGTTTGGCAATAACAAGCTTACTAC...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNVVSLL*PNRVEP
Trigger: TGGTTCGACCCTGTTTGGCAATAACAAGCTTACTAC...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGGAGTATGTTAGACTATaGATGTGCTGCTGGAGAACA +
Preference number: 5 (lower is better)
Translates to: VIANVCTLQSSKGHKTALEYVRL*MCCWRT
Trigger: TGTTCTCCAGCAGCACATCAATAGTCTAACATACTC...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTCTGGGCTGCTGGATTaGTTGGTTTCAATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNSGLLD*LVSISL
Trigger: AAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATTCAAAGAGATGTGACTaGGCTGTGCCTGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNSKRCD*AVPVVC
Trigger: ACAAACAACAGGCACAGCCAAGTCACATCTCTTTGA...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTCAAAGAGATGTGACTaGGCTGTGCCTGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNSKRCD*AVPVVC
Trigger: ACAAACAACAGGCACAGCCAAGTCACATCTCTTTGA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTTCCTTCTGTGGATAGTTCATCTGTTAAGGATCCATTATCACCTGTCTCACTCCACTCTCCTTTTTCATaGGTAATTTTAGCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LPSVDSSSVKDPLSPVSLHSPFS*VILARS
Trigger: TGACCTTGCTAAAATTACCAATGAAAAAGGAGAGTG...GAGTGAGACAGGTGATAATGGATCCTTAACAGATGAACTATCCACAGAAGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTCAGAAAGATCCCATTTaGTTTCCTAACTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPQKDPI*FPNSGQ
Trigger: TTGGCCTGAGTTAGGAAACAAAATGGGATCTTTCTG...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp GAGAATTCTTTAAATCTCTCCAGTAAAAAGACAGATGCCTGCAAGACCTCACGCTTAGAAGTGTTTGTATaGGTTCCTAAAGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: ENSLNLSSKKTDACKTSRLEVFV*VPKVRV
Trigger: AACCCTGACTTTAGGAACCAATACAAACACTTCTAA...GCGTGAGGTCTTGCAGGCATCTGTCTTTTTACTGGAGAGATTTAAAGAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397007.8
CDS CCA 90 bp TCCTCTAGTGACTTGCTTTCATATTCTTTCATAGCAGTAATACACTaGTGCTTGGTACTTATGTTAGTGCTAACTCCAGCTTTGACCATA +
Preference number: 5 (lower is better)
Translates to: SSSDLLSYSFIAVIH*CLVLMLVLTPALTI
Trigger: TATGGTCAAAGCTGGAGTTAGCACTAACATAAGTACCAAGCACCAGTGTATTACTGCTATGAAAGAATATGAAAGCAAGTCACTAGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACCTTCAAAATGAGTCTTaGTTTCAGAAAGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNLQNES*FQKARF
Trigger: GAACCGCGCTTTCTGAAACAAAGACTCATTTTGAAG...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACACTTCAAAATGAGTCTTaGTTTCAGAAAGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTLQNES*FQKARF
Trigger: GAACCGCGCTTTCTGAAACAAAGACTCATTTTGAAG...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTAC +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNFQTRY*LFLLTY
Trigger: GTACGTCAACAGGAACAGCAAATACCTTGTTTGGAA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATCCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNPNVVS*LLPNRV
Trigger: GACCCTGTTTGGCAATAACAAGCTTACTACATTTGG...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACCCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNPNVVS*LLPNRV
Trigger: GACCCTGTTTGGCAATAACAAGCTTACTACATTTGG...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTTTGCCTCCAAAATTCAGTGTTAACTAACCAATTACTTAAGAGACGGATCCCTGTATCATCCACACTGTaGCTGTTGCTGTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: LCLQNSVLTNQLLKRRIPVSSTL*LLLCLF
Trigger: AAATAAACACAGCAACAGCAACAGTGTGGATGATAC...AGGGATCCGTCTCTTAAGTAATTGGTTAGTTAACACTGAATTTTGGAGGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000650171.1
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGAGATGTTTTATCTGTaGGCCAAACTCCATCCAATG +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTEMFYL*AKLHPM
Trigger: CATTGGATGGAGTTTGGCCAACAGATAAAACATCTC...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGCGTGATTGCCAATGTTaGTACTCTTCAAAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: VIANVCTLQSSKGHKTALRDCQC*YSSKFQ
Trigger: TTGGAACTTTGAAGAGTACAAACATTGGCAATCACG...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS GCA 90 bp TCTAGTGACTTGCTTTCATATTCTTTCATAGCAGTAATACACTGGTaGTTGGTACTTATGTTAGTGCTAACTCCAGCTTTGACCATAGTA +
Preference number: 5 (lower is better)
Translates to: SSDLLSYSFIAVIHW*LVLMLVLTPALTIV
Trigger: TACTATGGTCAAAGCTGGAGTTAGCACTAACATAAGTACCAAGCACCAGTGTATTACTGCTATGAAAGAATATGAAAGCAAGTCACTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACTTTTGTGCAAAGGCATaGTTTTGGGATGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNFCAKA*FWDEKR
Trigger: TCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAA...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATTTTTGTGCAAAGGCATaGTTTTGGGATGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNFCAKA*FWDEKR
Trigger: TCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAA...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNVIHWC*VLMLVL
Trigger: TAGCACTAACATAAGTACCAAGCACCAGTGTATTAC...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTVIHWC*VLMLVL
Trigger: TAGCACTAACATAAGTACCAAGCACCAGTGTATTAC...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGTATCATCCACACTGTaGCTGTTGCTGTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTVSSTL*LLLCLF
Trigger: AAATAAACACAGCAACAGCAACAGTGTGGATGATAC...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp GTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACAGCTTTGCACTCTCCTTTTTCATaGGTAATTTTAGCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VIANVCTLQSSKGHKTALHSPFS*VILARS
Trigger: TGACCTTGCTAAAATTACCAATGAAAAAGGAGAGTG...CAAAGCTGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp AATGTAGGCCCTAATCTCCCCAAGCCAAATAATAATTCATTTACATTCCCAAACCTCCTTCAAAATAGATaGAACCATAACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: NVGPNLPKPNNNSFTFPNLLQNR*NHNLSD
Trigger: GTCGGAAAGGTTATGGTTCAATCTATTTTGAAGGAG...GTTTGGGAATGTAAATGAATTATTATTTGGCTTGGGGAGATTAGGGCCTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp TTCAACGTGATTGCCAATGTTTGTACTCTTCAAAGTTCCAAGGGTCATAAAACATTCTCATCAACAGGTTaGCTTAGGAAACTAAATCTC +
Preference number: 5 (lower is better)
Translates to: FNVIANVCTLQSSKGHKTFSSTG*LRKLNL
Trigger: GAGATTTAGTTTCCTAAGCAAACCTGTTGATGAGAA...TGTTTTATGACCCTTGGAACTTTGAAGAGTACAAACATTGGCAATCACGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS-3UTR CAA 90 bp CTGAGAGGTAGAGGATGCTTTACAAAGAAATCCCGTATCAATGATACAAGTAATCACTCTCCTTTTTCATaGGTAATTTTAGCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LRGRGCFTKKSRINDTSNHSPFS*VILARS
Trigger: TGACCTTGCTAAAATTACCAATGAAAAAGGAGAGTG...ATTACTTGTATCATTGATACGGGATTTCTTTGTAAAGCATCCTCTACCTCTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397004.8
ENST00000397007.8
CDS CCA 90 bp AAGAATAACCAATTATCTTCTGTATGCTACCACAGGTTTGAAACCTaGCCTCATACAATGTGTTACTTAACCAAATGTGTTTCCTTTATG +
Preference number: 5 (lower is better)
Translates to: KNNQLSSVCYHRFET*PHTMCYLTKCVSFM
Trigger: CATAAAGGAAACACATTTGGTTAAGTAACACATTGTATGAGGCCAGGTTTCAAACCTGTGGTAGCATACAGAAGATAATTGGTTATTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461047.2
CDS GCA 72 bp CCCCCACGAAACCGTCGCCGCCGCCGCTACCACCCCTaGCACCGACCGCCGCTTCGGGCGCAGCGCGCAGAG +
Preference number: 6 (lower is better)
Translates to: PPRNRRRRRYHP*HRPPLRAQRAE
Trigger: CTCTGCGCGCTGCGCCCGAAGCGGCGGTCGGTGGCAGGGGTGGTAGCGGCGGCGGCGACGGTTTCGTGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000359171.8
ENST00000397007.8
ENST00000532475.1
ENST00000650171.1
CDS CAA 90 bp CAGAGGGCCCGACTGCGTCACACGCCGCCCGGCGTCAGAGGCTCGTaGCGGACGCTCCGCCCTCGCCGTCCGCGAATTGGTGGACGCGGC +
Preference number: 6 (lower is better)
Translates to: QRARLRHTPPGVRGS*RTLRPRRPRIGGRG
Trigger: GCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACGCCGGGCGGCGTGTGACGCAGTCGGGCCCTCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS GCA 72 bp GACTGCGTCACACGCCGCCCGGCGTCAGAGGCTCGTTaGGGACGCTCCGCCCTCGCCGTCCGCGAATTGGTG +
Preference number: 6 (lower is better)
Translates to: DCVTRRPASEAR*GRSALAVRELV
Trigger: CACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACGCCGGGCGGCGTGTGACGCAGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CAA 72 bp GCTCGTTGCGGACGCTCCGCCCTCGCCGTCCGCGAATaGGTGGACGCGGCCGCCACTCTGGGTCGACCCTGT +
Preference number: 6 (lower is better)
Translates to: ARCGRSALAVRE*VDAAATLGRPC
Trigger: ACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CAA 72 bp CGACTGCGTCACACGCCGCCCGGCGTCAGAGGCTCGTaGCGGACGCTCCGCCCTCGCCGTCCGCGAATTGGT +
Preference number: 6 (lower is better)
Translates to: RLRHTPPGVRGS*RTLRPRRPRIG
Trigger: ACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACGCCGGGCGGCGTGTGACGCAGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CCA 72 bp CTCGTTGCGGACGCTCCGCCCTCGCCGTCCGCGAATTaGTGGACGCGGCCGCCACTCTGGGTCGACCCTGTT +
Preference number: 6 (lower is better)
Translates to: LVADAPPSPSAN*WTRPPLWVDPV
Trigger: AACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CCA 72 bp GTTGCGGACGCTCCGCCCTCGCCGTCCGCGAATTGGTaGACGCGGCCGCCACTCTGGGTCGACCCTGTTATT +
Preference number: 6 (lower is better)
Translates to: VADAPPSPSANW*TRPPLWVDPVI
Trigger: AATAACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CAA 90 bp GCGTCAGAGGCTCGTTGCGGACGCTCCGCCCTCGCCGTCCGCGAATaGGTGGACGCGGCCGCCACTCTGGGTCGACCCTGTTATTCATTG +
Preference number: 6 (lower is better)
Translates to: ASEARCGRSALAVRE*VDAAATLGRPCYSL
Trigger: CAATGAATAACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGAGGGCGGAGCGTCCGCAACGAGCCTCTGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CCA 72 bp TCGCCGTCCGCGAATTGGTGGACGCGGCCGCCACTCTaGGTCGACCCTGTTATTCATTGGGCAACGCGTCTT +
Preference number: 6 (lower is better)
Translates to: SPSANWWTRPPL*VDPVIHWATRL
Trigger: AAGACGCGTTGCCCAATGAATAACAGGGTCGACCCAGAGTGGCGGCCGCGTCCACCAATTCGCGGACGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS GCA 72 bp GGCGCAGAGAAGGACCATATGCCTTCCCCACCTGACTaGTGGGCCAGAGAGCAGGCCTCACTGATCCTTTTG +
Preference number: 6 (lower is better)
Translates to: GAEKDHMPSPPD*WAREQASLILL
Trigger: CAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAGCAGTCAGGTGGGGAAGGCATATGGTCCTTCTCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483285.1
CDS CCA 72 bp GCACTCCATCCTGGGGTACAGAGCGAGACTGACTGCTaGGCCAGAGAGCAGGCCTCACTGATCCTTTTGCCT +
Preference number: 6 (lower is better)
Translates to: ALHPGVQSETDC*AREQASLILLP
Trigger: AGGCAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAGCAGTCAGTCTCGCTCTGTACCCCAGGATGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650171.1
CDS CAA 72 bp CGCTGGAAGTGGCTGGAGAAGACCCAAACAAGCCAGTaGTGGTACCTGCTCCCACCTGGTTCTGTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: RWKWLEKTQTSQ*WYLLPPGSVGP
Trigger: AGGGCCCACAGAACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 72 bp GGCTGGAGAAGACCCAAACAAGCCAGTTGTGGTACCTaGTCCCACCTGGTTCTGTGGGCCCTTCCTGTTAGC +
Preference number: 6 (lower is better)
Translates to: GWRRPKQASCGT*SHLVLWALPVS
Trigger: GCTAACAGGAAGGGCCCACAGAACCAGGTGGGAGCAGGTACCACAACTGGCTTGTTTGGGTCTTCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp GCAGAGAAGGACCATATGCCTTCCCCACCTGACTGCTaGGCCAGAGAGCAGGCCTCACTGATCCTTTTGCCT +
Preference number: 6 (lower is better)
Translates to: AEKDHMPSPPDC*AREQASLILLP
Trigger: AGGCAAAAGGATCAGTGAGGCCTGCTCTCTGGCCCAGCAGTCAGGTGGGGAAGGCATATGGTCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483285.1
CDS CAA 72 bp GACGCGGCCGCCACTCTGGGTCGACCCTGTTATTCATaGGGCAACGCGTCTTTTGAAACCGAACTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: DAAATLGRPCYS*GNASFETELKG
Trigger: CCCCTTCAGTTCGGTTTCAAAAGACGCGTTGCCCAATGAATAACAGGGTCGACCCAGAGTGGCGGCCGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359171.8
CDS CCA 72 bp GGAGGAGCTGAAGAGTCCTGTTGCGCTGGAAGTGGCTaGAGAAGACCCAAACAAGCCAGTTGTGGTACCTGC +
Preference number: 6 (lower is better)
Translates to: GGAEESCCAGSG*RRPKQASCGTC
Trigger: GCAGGTACCACAACTGGCTTGTTTGGGTCTTCTCCAGCCACTTCCAGCGCAACAGGACTCTTCAGCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp CGGGGTTCATTTAGCTGGCTGTCAAGCTCCTTCAGGTaGCCCCATAGGGCTTCACATAGTGTCCATGTCAGG +
Preference number: 6 (lower is better)
Translates to: RGSFSWLSSSFR*PHRASHSVHVR
Trigger: CCTGACATGGACACTATGTGAAGCCCTATGGGGCCACCTGAAGGAGCTTGACAGCCAGCTAAATGAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000483285.1
ENST00000529063.1
ENST00000650171.1
CDS GCA 72 bp GGAGGCAAACGTTGTAGTGAGCCAAGATTATGCCACTaGACTCCATCCTGGGGTACAGAGCGAGACTGTCTC +
Preference number: 6 (lower is better)
Translates to: GGKRCSEPRLCH*TPSWGTERDCL
Trigger: GAGACAGTCTCGCTCTGTACCCCAGGATGGAGTGCAGTGGCATAATCTTGGCTCACTACAACGTTTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488828.1
CDS TCA 72 bp GGGCCATGTCCATCAAGAGTTTTCCCTTGCCATAGGTaGCAGACTTTTCACGAGGGACTAGGCCTAGTTGCC +
Preference number: 6 (lower is better)
Translates to: GPCPSRVFPCHR*QTFHEGLGLVA
Trigger: GGCAACTAGGCCTAGTCCCTCGTGAAAAGTCTGTCACCTATGGCAAGGGAAAACTCTTGATGGACATGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS CCA 72 bp CCAAAGGAAAAGCCAGTGTTCTGGGTGGTTGTAGCCTaGCCAAATGGTTTGCTGAAGAGGCTGGTAGTCTGC +
Preference number: 6 (lower is better)
Translates to: PKEKPVFWVVVA*PNGLLKRLVVC
Trigger: GCAGACTACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACAACCACCCAGAACACTGGCTTTTCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp GGTTTGCCATTAAGAGCCATCTGCAAGGGCGTAGTCTaGCTTGCAGGAGGCAAAGGAGCAGTCTTCAACTTC +
Preference number: 6 (lower is better)
Translates to: GLPLRAICKGVV*LAGGKGAVFNF
Trigger: GAAGTTGAAGACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 72 bp CCATTCAGCTGTTCTCCACTATTAGCAAGAGTCCAGTaGGGGCCCCAACCAACACGAAATGAGCGTCCCATG +
Preference number: 6 (lower is better)
Translates to: PFSCSPLLARVQ*GPQPTRNERPM
Trigger: CATGGGACGCTCATTTCGTGTTGGTTGGGGCCCCAACTGGACTCTTGCTAATAGTGGAGAACAGCTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000529063.1
ENST00000650171.1
CDS GCA 72 bp TGCCAAAGCCAGTATTCTGTCCAAATGTTGAAGTTGTaGCAAAGCCACCTGTGCCACCCCCAAAGGGTGTTC +
Preference number: 6 (lower is better)
Translates to: CQSQYSVQMLKL*QSHLCHPQRVF
Trigger: GAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCACAACTTCAACATTTGGACAGAATACTGGCTTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000532475.1
ENST00000650171.1
CDS GCA 72 bp GCCATTAAGAGCCATCTGCAAGGGCGTAGTCTGGCTTaGAGGAGGCAAAGGAGCAGTCTTCAACTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: AIKSHLQGRSLA*RRQRSSLQLLC
Trigger: ACAAAGAAGTTGAAGACTGCTCCTTTGCCTCCTGCAAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp AAAGCCAGTGTTCTGGGTGGTTGTAGCCTGGCCAAATaGTTTGCTGAAGAGGCTGGTAGTCTGCTGATTCTG +
Preference number: 6 (lower is better)
Translates to: KASVLGGCSLAK*FAEEAGSLLIL
Trigger: CAGAATCAGCAGACTACCAGCCTCTTCAGCAAACCATTTGGCCAGGCTACAACCACCCAGAACACTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp ATCCCATGGTGTTGGTGCTTGGCTGTCCTATGGTGCTaGTATTACCAAAGGAAAAGCCAGTGTTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: IPWCWCLAVLWC*YYQRKSQCSGW
Trigger: CCACCCAGAACACTGGCTTTTCCTTTGGTAATACCAGCACCATAGGACAGCCAAGCACCAACACCATGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CCA 72 bp CACTGGTATTTGTGCCAAAACCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTGCACTGGTTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: HWYLCQNQRARH*LYQMKVHWLCC
Trigger: GCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTTTTGGCACAAATACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000397004.8
ENST00000529379.1
ENST00000650171.1
CDS CCA 72 bp AAGTCAGGGTTGGTTTGTTACCAAAGAGCCCGCCACTaGTTGTACCAAATGAAGGTGCACTGGTTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: KSGLVCYQRARH*LYQMKVHWLCC
Trigger: GCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTAACAAACCAACCCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359171.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
CDS CCA 72 bp GTCAGGCTCCAGTGCTTCACAAGGTTTAACAGCTACTaGATTGGGCAGGAATCCAAACTCCATGGAATCGGC +
Preference number: 6 (lower is better)
Translates to: VRLQCFTRFNSY*IGQESKLHGIG
Trigger: GCCGATTCCATGGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCTTGTGAAGCACTGGAGCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS CAA 72 bp TCAGGGTTGGTTTGTTACCAAAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCACTGGTTGTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SGLVCYQRARHW*YQMKVHWLCCF
Trigger: GAAGCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTAACAAACCAACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359171.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
CDS TCA 72 bp GCCAAAACCAAAGAGCCCGCCACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCTGCTTCCAAATGTAGT +
Preference number: 6 (lower is better)
Translates to: AKTKEPATGCTK*RCTGCAASKCS
Trigger: ACTACATTTGGAAGCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000397004.8
ENST00000529379.1
ENST00000650171.1
CDS GCA 72 bp ATTGGTCTGCCCAAAGAGACCTGTTCCTGTTCCAAATaGTGTCCCAGTGCTGGTGTTTGTAGCTGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: IGLPKETCSCSK*CPSAGVCSCPK
Trigger: TTTGGGACAGCTACAAACACCAGCACTGGGACAGCATTTGGAACAGGAACAGGTCTCTTTGGGCAGACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS GCA 72 bp AGGGTCGAACCAACAGCACCAAATCCAGTATTGGTCTaGCCAAAGAGACCTGTTCCTGTTCCAAATGCTGTC +
Preference number: 6 (lower is better)
Translates to: RVEPTAPNPVLV*PKRPVPVPNAV
Trigger: GACAGCATTTGGAACAGGAACAGGTCTCTTTGGGCAGACCAATACTGGATTTGGTGCTGTTGGTTCGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CCA 72 bp AATAGTAGTCCCAGTAGGAGCAGCTGTAAAACTACTTaGCCCAAAGAGGGAGCCAGATGTGCTGCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: NSSPSRSSCKTT*PKEGARCAAKR
Trigger: CCTTTTGGCAGCACATCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCTGCTCCTACTGGGACTACTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp GTAGCTGTCCCAAAAAGACCTCCAGGCTGTGAGGCTTaGGTTACTCCAAATAATCCCATGGTGTTGGTGCTT +
Preference number: 6 (lower is better)
Translates to: VAVPKRPPGCEA*VTPNNPMVLVL
Trigger: AAGCACCAACACCATGGGATTATTTGGAGTAACCCAAGCCTCACAGCCTGGAGGTCTTTTTGGGACAGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CAA 72 bp GACTGGTCCCTGTGCTTGCAGTTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTACCAAACCCAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: DWSLCLQFQTRY*LFLLTYQTQSQ
Trigger: CTGGCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 72 bp TGGTATTTGTGCCAAAACCAAAGAGCCCGCCACTGGTaGTACCAAATGAAGGTGCACTGGTTGTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: WYLCQNQRARHW*YQMKVHWLCCF
Trigger: GAAGCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTTTTGGCACAAATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000397004.8
ENST00000529379.1
ENST00000650171.1
CDS CAA 72 bp GGCTCCAGTGCTTCACAAGGTTTAACAGCTACTGGATaGGGCAGGAATCCAAACTCCATGGAATCGGCAATC +
Preference number: 6 (lower is better)
Translates to: GSSASQGLTATG*GRNPNSMESAI
Trigger: GATTGCCGATTCCATGGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCTTGTGAAGCACTGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529063.1
CDS CAA 90 bp ATGAGAAGAGACTGGTCCCTGTGCTTGCAGTTCCAAACAAGGTATTaGCTGTTCCTGTTGACGTACCAAACCCAAAGCCAGTGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: MRRDWSLCLQFQTRY*LFLLTYQTQSQCLW
Trigger: CCACAAGCACTGGCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 72 bp ACTAGTAGTGCCAAAGCCAGTATTCTGTCCAAATGTTaGAGTTGTGCCAAAGCCACCTGTGCCACCCCCAAA +
Preference number: 6 (lower is better)
Translates to: TSSAKASILSKC*SCAKATCATPK
Trigger: TTTGGGGGTGGCACAGGTGGCTTTGGCACAACTTCAACATTTGGACAGAATACTGGCTTTGGCACTACTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000532475.1
ENST00000650171.1
CDS TCA 72 bp TGGCCAAATGGTTTGCTGAAGAGGCTGGTAGTCTGCTaGTTCTGTTGGCCAAAGAGACCACCTGGATTTGTT +
Preference number: 6 (lower is better)
Translates to: WPNGLLKRLVVC*FCWPKRPPGFV
Trigger: AACAAATCCAGGTGGTCTCTTTGGCCAACAGAATCAGCAGACTACCAGCCTCTTCAGCAAACCATTTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 72 bp ATAATCCCATGGTGTTGGTGCTTGGCTGTCCTATGGTaGTGGTATTACCAAAGGAAAAGCCAGTGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: IIPWCWCLAVLW*WYYQRKSQCSG
Trigger: CCCAGAACACTGGCTTTTCCTTTGGTAATACCAGCACCATAGGACAGCCAAGCACCAACACCATGGGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS GCA 72 bp CCTGAAGTGACTCATCATGAAAAGACGTTTCTTCACTaGTTCCTTCCAGCCCATTTCGCAAAGCAGCACGCA +
Preference number: 6 (lower is better)
Translates to: PEVTHHEKTFLH*FLPAHFAKQHA
Trigger: TGCGTGCTGCTTTGCGAAATGGGCTGGAAGGAAGCAGTGAAGAAACGTCTTTTCATGATGAGTCACTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 72 bp TGCTTGCAGTTCCAAACAAGGTATTTGCTGTTCCTGTaGACGTACCAAACCCAAAGCCAGTGCTTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: CLQFQTRYLLFL*TYQTQSQCLWR
Trigger: CCTCCACAAGCACTGGCTTTGGGTTTGGTACGTCAACAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 72 bp GGTGCACTGGTTGTGCTGCTTCCAAATGTAGTAAGCTaGTTATTGCCAAACAGGGTCGAACCAACAGCACCA +
Preference number: 6 (lower is better)
Translates to: GALVVLLPNVVS*LLPNRVEPTAP
Trigger: TGGTGCTGTTGGTTCGACCCTGTTTGGCAATAACAAGCTTACTACATTTGGAAGCAGCACAACCAGTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
ENST00000529379.1
ENST00000650171.1
CDS CAA 72 bp AATGGGGACTCAGTTAGGGGTTTAACAGCTACTGGATaGGGCAGGAATCCAAACTCCATGGAATCGGCAATC +
Preference number: 6 (lower is better)
Translates to: NGDSVRGLTATG*GRNPNSMESAI
Trigger: GATTGCCGATTCCATGGAGTTTGGATTCCTGCCCAATCCAGTAGCTGTTAAACCCCTAACTGAGTCCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS CAA 90 bp GTGCAAAGGCATTGTTTTGGGATGAGAAGAGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTATTTGCTGTTCCTGTTGACGTACCAA +
Preference number: 6 (lower is better)
Translates to: VQRHCFGMRRDWSLC*QFQTRYLLFLLTYQ
Trigger: TTGGTACGTCAACAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 72 bp TCTCTTCTAACATGGTATCCAAAACTGGCTCCTGGGTaGTATCTACCATGTCACTGTCCAGTTCCACAACCC +
Preference number: 6 (lower is better)
Translates to: SLLTWYPKLAPG*YLPCHCPVPQP
Trigger: GGGTTGTGGAACTGGACAGTGACATGGTAGATATCACCCAGGAGCCAGTTTTGGATACCATGTTAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS TCA 72 bp GAAGATGCAATATGTGTTGAGGCAGACACAGGTTCCTaGTCCTCAGGCATGCTCTCTTCTAACATGGTATCC +
Preference number: 6 (lower is better)
Translates to: EDAICVEADTGS*SSGMLSSNMVS
Trigger: GGATACCATGTTAGAAGAGAGCATGCCTGAGGATCAGGAACCTGTGTCTGCCTCAACACATATTGCATCTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS TCA 72 bp TTTGTTACCAAAGAGCCCGCCACTGGTTGTACCAAATaGAGGTGCACTGGTTGTGCTGCTTCCAAATGTAGT +
Preference number: 6 (lower is better)
Translates to: FVTKEPATGCTK*RCTGCAASKCS
Trigger: ACTACATTTGGAAGCAGCACAACCAGTGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359171.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
CDS TCA 72 bp TTTCTACCAAACATGATTCCTAGGAGAAGGGGTGTGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: FLPNMIPRRRGV*VCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACTCACACACCCCTTCTCCTAGGAATCATGTTTGGTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530516.1
CDS GCA 72 bp AGGCATTGTTTTGGGATGAGAAGAGACTGGTCCCTGTaGTTGCAGTTCCAAACAAGGTATTTGCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: RHCFGMRRDWSL*LQFQTRYLLFL
Trigger: CAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCCAAAACAATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp CAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTaGTATTTGTGCCAAAACCAAAGAGCCCGCCACTGG +
Preference number: 6 (lower is better)
Translates to: QVLVYFQKYYSH*YLCQNQRARHW
Trigger: CCAGTGGCGGGCTCTTTGGTTTTGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000397004.8
ENST00000529379.1
ENST00000650171.1
CDS CAA 90 bp GTGCCAAAGCCACCTGTGCCACCCCCAAAGGGTGTTCCAAATGATTaGTTAAACATCTTCAAAATGAGTCTTTGTTTCAGAAAGCGCGGT +
Preference number: 6 (lower is better)
Translates to: VPKPPVPPPKGVPND*LNIFKMSLCFRKRG
Trigger: ACCGCGCTTTCTGAAACAAAGACTCATTTTGAAGATGTTTAACAAATCATTTGGAACACCCTTTGGGGGTGGCACAGGTGGCTTTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000532475.1
ENST00000650171.1
CDS CAA 90 bp CCTCCTGGTTTAGTCTGTGAATTTCCAAAGAGGCCTCCAGTATTGTaGCTAGAACCAAATGCAGATGTTCCAAATGCCCCTCCACTAGTA +
Preference number: 6 (lower is better)
Translates to: PPGLVCEFPKRPPVL*LEPNADVPNAPPLV
Trigger: TACTAGTGGAGGGGCATTTGGAACATCTGCATTTGGTTCTAGCAACAATACTGGAGGCCTCTTTGGAAATTCACAGACTAAACCAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000532475.1
ENST00000650171.1
CDS GCA 72 bp ATCCGACTGCACAGTGAAGTCACTTTGATGTGTAACTaGTCCAGGTCATTACCTGAGCAATCCACCTACAAA +
Preference number: 6 (lower is better)
Translates to: IRLHSEVTLMCN*SRSLPEQSTYK
Trigger: TTTGTAGGTGGATTGCTCAGGTAATGACCTGGAGCAGTTACACATCAAAGTGACTTCACTGTGCAGTCGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482690.1
CDS CCA 72 bp CAAATAATCCCATGGTGTTGGTGCTTGGCTGTCCTATaGTGCTGGTATTACCAAAGGAAAAGCCAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: QIIPWCWCLAVL*CWYYQRKSQCS
Trigger: AGAACACTGGCTTTTCCTTTGGTAATACCAGCACCATAGGACAGCCAAGCACCAACACCATGGGATTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CCA 72 bp ATGCTCTCTTCTAACATGGTATCCAAAACTGGCTCCTaGGTGATATCTACCATGTCACTGTCCAGTTCCACA +
Preference number: 6 (lower is better)
Translates to: MLSSNMVSKTGS*VISTMSLSSST
Trigger: TGTGGAACTGGACAGTGACATGGTAGATATCACCCAGGAGCCAGTTTTGGATACCATGTTAGAAGAGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000650171.1
CDS CCA 72 bp AGGATGTGGATGGGATATTCATTAAAGATGCTGCTCTaGGAGTACGACATTCTTGCACAGAGACACTTGGTG +
Preference number: 6 (lower is better)
Translates to: RMWMGYSLKMLL*EYDILAQRHLV
Trigger: CACCAAGTGTCTCTGTGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAATGAATATCCCATCCACATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS CCA 72 bp AGATTGGGGACAATGAGAGGACACAGTTCATCCACATaGACAGTGCTGTGTTTTAATTTGAGCTCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: RLGTMRGHSSST*TVLCFNLSSRG
Trigger: ACCTCTGGAGCTCAAATTAAAACACAGCACTGTCCATGTGGATGAACTGTGTCCTCTCATTGTCCCCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000483285.1
ENST00000650171.1
CDS CAA 72 bp CATTGTTTTGGGATGAGAAGAGACTGGTCCCTGTGCTaGCAGTTCCAAACAAGGTATTTGCTGTTCCTGTTG +
Preference number: 6 (lower is better)
Translates to: HCFGMRRDWSLC*QFQTRYLLFLL
Trigger: CAACAGGAACAGCAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCCAAAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 72 bp CTTGGGTTACTCCAAATAATCCCATGGTGTTGGTGCTaGGCTGTCCTATGGTGCTGGTATTACCAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: LGLLQIIPWCWC*AVLWCWYYQRK
Trigger: TTTCCTTTGGTAATACCAGCACCATAGGACAGCCAAGCACCAACACCATGGGATTATTTGGAGTAACCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000650171.1
CDS CAA 72 bp CTGGTTGTGCTGCTTCCAAATGTAGTAAGCTTGTTATaGCCAAACAGGGTCGAACCAACAGCACCAAATCCA +
Preference number: 6 (lower is better)
Translates to: LVVLLPNVVSLL*PNRVEPTAPNP
Trigger: TGGATTTGGTGCTGTTGGTTCGACCCTGTTTGGCAATAACAAGCTTACTACATTTGGAAGCAGCACAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
ENST00000529379.1
ENST00000650171.1
CDS GCA 72 bp AGTATTGTTGCTAGAACCAAATGCAGATGTTCCAAATaGCCCTCCACTAGTAGTGCCAAAGCCAGTATTCTG +
Preference number: 6 (lower is better)
Translates to: SIVARTKCRCSK*PSTSSAKASIL
Trigger: CAGAATACTGGCTTTGGCACTACTAGTGGAGGGGCATTTGGAACATCTGCATTTGGTTCTAGCAACAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000532475.1
ENST00000650171.1
CDS CCA 72 bp TTTGTGCAAAGGCATTGTTTTGGGATGAGAAGAGACTaGTCCCTGTGCTTGCAGTTCCAAACAAGGTATTTG +
Preference number: 6 (lower is better)
Translates to: FVQRHCFGMRRD*SLCLQFQTRYL
Trigger: CAAATACCTTGTTTGGAACTGCAAGCACAGGGACCAGTCTCTTCTCATCCCAAAACAATGCCTTTGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 72 bp GAAGTGTTTGTATTGGTTCCTAAAGTCAGGGTTGGTTaGTTACCAAAGAGCCCGCCACTGGTTGTACCAAAT +
Preference number: 6 (lower is better)
Translates to: EVFVLVPKVRVG*LPKSPPLVVPN
Trigger: ATTTGGTACAACCAGTGGCGGGCTCTTTGGTAACAAACCAACCCTGACTTTAGGAACCAATACAAACACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359171.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
CDS CAA 90 bp CCAAAATTAGAAGTGTTTGTATTGGTTCCTAAAGTCAGGGTTGGTTaGTTACCAAAGAGCCCGCCACTGGTTGTACCAAATGAAGGTGCA +
Preference number: 6 (lower is better)
Translates to: PKLEVFVLVPKVRVG*LPKSPPLVVPNEGA
Trigger: TGCACCTTCATTTGGTACAACCAGTGGCGGGCTCTTTGGTAACAAACCAACCCTGACTTTAGGAACCAATACAAACACTTCTAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359171.8
ENST00000397007.8
ENST00000397013.2
ENST00000461047.2
CDS TCA 72 bp AATCCAGTTGTACTAGTTCCAAAGGCAGTTTTGTTCTaGCCATATGCAAAGCCTGAATTAGTGGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: NPVVLVPKAVLF*PYAKPELVVEE
Trigger: CTCCTCCACCACTAATTCAGGCTTTGCATATGGTCAGAACAAAACTGCCTTTGGAACTAGTACAACTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 72 bp GAAAGTGGAGTTTATGAATCAACAGCCCTAAGAATCTaGCTCTGGCATGCCTTAAGATCCTCTCCTACTACA +
Preference number: 6 (lower is better)
Translates to: ESGVYESTALRI*LWHALRSSPTT
Trigger: TGTAGTAGGAGAGGATCTTAAGGCATGCCAGAGTCAGATTCTTAGGGCTGTTGATTCATAAACTCCACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488828.1
CDS GCA 72 bp GCATGTTTAATGCAACAATGGTATCATCCACACTGTTaGTGTTGCTGTGTTTATTTCCAGCACTTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: ACLMQQWYHPHC*CCCVYFQHFLG
Trigger: CCCCAGAAAGTGCTGGAAATAAACACAGCAACAGCAACAGTGTGGATGATACCATTGTTGCATTAAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 72 bp TTCATTAAAGATGCTGCTCTGGGAGTACGACATTCTTaGACAGAGACACTTGGTGAAAGAAAAGCTCCACTT +
Preference number: 6 (lower is better)
Translates to: FIKDAALGVRHS*TETLGERKAPL
Trigger: AAGTGGAGCTTTTCTTTCACCAAGTGTCTCTGTGCAAGAATGTCGTACTCCCAGAGCAGCATCTTTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000429801.5
ENST00000650171.1
CDS GCA 72 bp TTTTTGCTTGGCTCTATTGGCCACATATACCTGAAATaGTTCTTCATACATGCTGAGCGCCCTAGAAATGGA +
Preference number: 6 (lower is better)
Translates to: FLLGSIGHIYLK*FFIHAERPRNG
Trigger: TCCATTTCTAGGGCGCTCAGCATGTATGAAGAAGCATTTCAGGTATATGTGGCCAATAGAGCCAAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530345.1
CDS CCA 72 bp ACTGTTGCTGTTGCTGTGTTTATTTCCAGCACTTTCTaGGGTTTGAGGAATAGGTTTGGCAATAGGGTTAGT +
Preference number: 6 (lower is better)
Translates to: TVAVAVFISSTF*GLRNRFGNRVS
Trigger: ACTAACCCTATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAATAAACACAGCAACAGCAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp CAGGTGCTGGTTTACTTCCAAAAATACTATTCCCACTaGTATTTGTGCCAAAACCAAATGAAGGTGCACTGG +
Preference number: 6 (lower is better)
Translates to: QVLVYFQKYYSH*YLCQNQMKVHW
Trigger: CCAGTGCACCTTCATTTGGTTTTGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGCACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527104.5
CDS CAA 72 bp CGCATGTTTAATGCAACAATGGTATCATCCACACTGTaGCTGTTGCTGTGTTTATTTCCAGCACTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: RMFNATMVSSTL*LLLCLFPALSG
Trigger: CCCAGAAAGTGCTGGAAATAAACACAGCAACAGCAACAGTGTGGATGATACCATTGTTGCATTAAACATGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 72 bp AGGCCGGTATTCTTTGAATTGAGCTCCCTGTTTCCTTaGAACTGCTTCCAATCTTCCTTCATAGTTGATATC +
Preference number: 6 (lower is better)
Translates to: RPVFFELSSLFP*NCFQSSFIVDI
Trigger: GATATCAACTATGAAGGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTCAATTCAAAGAATACCGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 72 bp GTTTCCTTGAAACTGCTTCCAATCTTCCTTCATAGTTaGTATCAGCAAGGCGATCTGGGCTCTTTATTAAAC +
Preference number: 6 (lower is better)
Translates to: VSLKLLPIFLHS*YQQGDLGSLLN
Trigger: GTTTAATAAAGAGCCCAGATCGCCTTGCTGATATCAACTATGAAGGAAGATTGGAAGCAGTTTCAAGGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 72 bp TCTGGCTTTCTTTGTCTCAAACTGAGTTTTTCTAAGTaGACTTTGAATGGGGACTCAGTTAGGCAAGAGGAT +
Preference number: 6 (lower is better)
Translates to: SGFLCLKLSFSK*TLNGDSVRQED
Trigger: ATCCTCTTGCCTAACTGAGTCCCCATTCAAAGTTCACTTAGAAAAACTCAGTTTGAGACAAAGAAAGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429801.5
CDS CAA 72 bp GCTGTTGCTGTGTTTATTTCCAGCACTTTCTGGGGTTaGAGGAATAGGTTTGGCAATAGGGTTAGTATAAAA +
Preference number: 6 (lower is better)
Translates to: AVAVFISSTFWG*RNRFGNRVSIK
Trigger: TTTTATACTAACCCTATTGCCAAACCTATTCCTCAAACCCCAGAAAGTGCTGGAAATAAACACAGCAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 72 bp CTTTCATATTCTTTCATAGCAGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTAACTCCAGCTTTGACC +
Preference number: 6 (lower is better)
Translates to: LSYSFIAVIHWC*VLMLVLTPALT
Trigger: GGTCAAAGCTGGAGTTAGCACTAACATAAGTACCAAGCACCAGTGTATTACTGCTATGAAAGAATATGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CAA 90 bp AGTGACTTGCTTTCATATTCTTTCATAGCAGTAATACACTGGTGCTaGGTACTTATGTTAGTGCTAACTCCAGCTTTGACCATAGTATCT +
Preference number: 6 (lower is better)
Translates to: SDLLSYSFIAVIHWC*VLMLVLTPALTIVS
Trigger: AGATACTATGGTCAAAGCTGGAGTTAGCACTAACATAAGTACCAAGCACCAGTGTATTACTGCTATGAAAGAATATGAAAGCAAGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS TCA 72 bp AGAATTATTTTCTATTTCTTCTCGGTCATCCTGAAGTaGCTCATCATGAAAAGACGTTTCTTCACTGCTTCC +
Preference number: 6 (lower is better)
Translates to: RIIFYFFSVILK*LIMKRRFFTAS
Trigger: GGAAGCAGTGAAGAAACGTCTTTTCATGATGAGTCACTTCAGGATGACCGAGAAGAAATAGAAAATAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS GCA 72 bp TTGCTTTCATATTCTTTCATAGCAGTAATACACTGGTaGTTGGTACTTATGTTAGTGCTAACTCCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: LLSYSFIAVIHW*LVLMLVLTPAL
Trigger: CAAAGCTGGAGTTAGCACTAACATAAGTACCAAGCACCAGTGTATTACTGCTATGAAAGAATATGAAAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000650171.1
CDS CCA 72 bp CAATTATCTTCTGTATGCTACCACAGGTTTGAAACCTaGCCTCATACAATGTGTTACTTAACCAAATGTGTT +
Preference number: 6 (lower is better)
Translates to: QLSSVCYHRFET*PHTMCYLTKCV
Trigger: AACACATTTGGTTAAGTAACACATTGTATGAGGCCAGGTTTCAAACCTGTGGTAGCATACAGAAGATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461047.2
CDS CCA 72 bp AATATTTCCAATCATACGAATCAGGAGAATAACGTGTaGTATAGTCAGTGTAACTTTAAGAGAGCCAAACCT +
Preference number: 6 (lower is better)
Translates to: NISNHTNQENNV*YSQCNFKRAKP
Trigger: AGGTTTGGCTCTCTTAAAGTTACACTGACTATACCACACGTTATTCTCCTGATTCGTATGATTGGAAATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397013.2
ENST00000461047.2
CDS CAA 72 bp GTATTTGTGCCAAAACCAAAATTAGAAGTGTTTGTATaGGTTCCTAAAGTCAGGGTTGGTTTGTTACCAAAG +
Preference number: 6 (lower is better)
Translates to: VFVPKPKLEVFV*VPKVRVGLLPK
Trigger: CTTTGGTAACAAACCAACCCTGACTTTAGGAACCAATACAAACACTTCTAATTTTGGTTTTGGCACAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359171.8
ENST00000397007.8
CDS CAA 72 bp ATAGTGAAATCAGAGACAATGCACTCTCCTTTTTCATaGGTAATTTTAGCAAGGTCATCCATAGATGGAATA +
Preference number: 6 (lower is better)
Translates to: IVKSETMHSPFS*VILARSSIDGI
Trigger: TATTCCATCTATGGATGACCTTGCTAAAATTACCAATGAAAAAGGAGAGTGCATTGTCTCTGATTTCACTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324932.12
ENST00000355260.7
ENST00000359171.8
ENST00000397004.8
ENST00000397007.8
ENST00000530516.1
ENST00000650171.1