Pregenerated sensors for NUDT8 (Homo sapiens)
Ensembl gene IDs: ENSG00000167799Ensembl transcript IDs: ENST00000301490.8, ENST00000376693.3, ENST00000534054.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTGATGACAGCTGTGAGGCCCCAGACCCGGTGTGGTCCATGCAGGAAGACGGGTAACACCTCATCTACCTaGAGGCAGGAGGCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VMTAVRPQTRCGPCRKTGNTSST*RQEAER Trigger: CCTCTCTGCCTCCTGCCTGCAGGTAGATGAGGTGTT...ACCCGTCTTCCTGCATGGACCACACCGGGTCTGGGGCCTCACAGCTGTCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTGAAGCCAGGGCCAGGTGCCAGCAGCTaGAGGGCAAACTCAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: KDLYSVLEWSWPDRVKPGPGASS*RANSVM Trigger: CATCACTGAGTTTGCCCTGCAGCTGCTGGCACCTGG...CCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTGAAGCCAGGGCTGGTAGGTACCAGGTaGCAGCAGCTGCAGGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: KDLYSVLEWSWPDRVKPGLVGTR*QQLQGK Trigger: TTTGCCCTGCAGCTGCTGGCACCTGGTACCTACCAG...CCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| 3UTR TCA 72 bp | TTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTaGAGCCAGGGGCTGCTTAGGGCGGGCCAGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: FIQSWSGAGLTG*SQGLLRAGQTL Trigger: GAGGGTCTGGCCCGCCCTAAGCAGCCCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| 3UTR TCA 72 bp | CAAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTaGCAGGGTGAAGCCAGGGGCTGCTTAGGGCGGGCC | + |
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Preference number: 3 (lower is better) Translates to: QRPLFSPGVELA*QGEARGCLGRA Trigger: GGCCCGCCCTAAGCAGCCCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR TCA 90 bp | GGCAAACTCAGTGATGACAGCTGTGAGGCCCCAGACCCGGTGTGGTCCATGCAGCGGGACCCCACGCACTaGGCAGAGCGGCACGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: GKLSDDSCEAPDPVWSMQRDPTH*AERHEH Trigger: GTGCTCGTGCCGCTCTGCTCAGTGCGTGGGGTCCCG...CTGCATGGACCACACCGGGTCTGGGGCCTCACAGCTGTCATCACTGAGTTTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR TCA 90 bp | GTCTGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACCTGCAGGCAGGGAGTGGAGCTGGCCTaGCAGGGTGAAGCCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VCSRWASGSANTSSTCRQGVELA*QGEARG Trigger: GCCCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCC...CTGCCTGCAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR TCA 90 bp | GTGATGACAGCTGTGAGGCCCCAGACCCGGTGTGGTCCATGCAGGAAGACGGGTGCTGGCCTGACAGGGTaGAGCCAGGGGCTGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: VMTAVRPQTRCGPCRKTGAGLTG*SQGLLR Trigger: CCTAAGCAGCCCCTGGCTTCACCCTGTCAGGCCAGC...ACCCGTCTTCCTGCATGGACCACACCGGGTCTGGGGCCTCACAGCTGTCATCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | AGACGGGTAGTGTGTAGCGGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTCTGACGTCGCCCTTGTaGCTCCCGGTCAGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RRVVCSGSGHPGRSGYSPLTSPL*LPVRRL Trigger: CAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAG...AGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCCGCTACACACTACCCGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | AGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACCTGCAGGCAGGAGGCAGAGGCCCCAGACCCGGTGTaGTCCATGCAGGAAGACGGG | + |
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Preference number: 4 (lower is better) Translates to: RWASGSANTSSTCRQEAEAPDPV*SMQEDG Trigger: CCCGTCTTCCTGCATGGACCACACCGGGTCTGGGGC...CTCTGCCTCCTGCCTGCAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR TCA 90 bp | AGACGGGTAGTGTGTAGCGGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTCCTCCGAGTTGGGCCTaGGGCTCTGGGGATCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RRVVCSGSGHPGRSGYSPPPSWA*GSGDPV Trigger: CACTGGATCCCCAGAGCCTCAGGCCCAACTCGGAGG...AGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCCGCTACACACTACCCGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR TCA 90 bp | GTAGTGTGTAGCGGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTGATTCTCAGACCCTCAGCCCCTaGGCAGGTCAGGCCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VVCSGSGHPGRSGYSPDSQTLSP*AGQAGQ Trigger: CTGGCCGGCCTGACCTGCTCAGGGGCTGAGGGTCTG...AGAATCAGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCCGCTACACACTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | TCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACCTGCATCCCGGTCAGGCGGCTaGACCGCAGCGTGTACAGCA | + |
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Preference number: 4 (lower is better) Translates to: SASAAGGPAAVQTPHLPASRSGG*TAACTA Trigger: TGCTGTACACGCTGCGGTCCAGCCGCCTGACCGGGA...TGCAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | GCCACCCCGGCAGAAGTGGGTATAGCCCTGATTCTGCGTCTGCAGCAGGTGGGCTTGGGCCTGAGGCTCTaGGGATCCAGTGGGCCTACA | + |
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Preference number: 4 (lower is better) Translates to: ATPAEVGIALILRLQQVGLGLRL*GSSGPT Trigger: TGTAGGCCCACTGGATCCCCAGAGCCTCAGGCCCAA...GCCCACCTGCTGCAGACGCAGAATCAGGGCTATACCCACTTCTGCCGGGGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | CGGGTAGTGTGTAGCGGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTGATTGCGTCTGCAGCAGGTaGGCCAGCGGCAGTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: RVVCSGSGHPGRSGYSPDCVCSR*ASGSAN Trigger: GTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCA...ATCAGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCCGCTACACACTACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | TGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACCTGCAGGCAGGAGCTGGTAGGTACCAGGTaGCAGCAGCTGCAGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CSRWASGSANTSSTCRQELVGTR*QQLQGK Trigger: TTTGCCCTGCAGCTGCTGGCACCTGGTACCTACCAG...CTCCTGCCTGCAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | AAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTGAAGCCAGGGGGTGAAGCCAGGGGCTaGTTAGGGCGGGCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: KDLYSVLEWSWPDRVKPGGEARG*LGRARP Trigger: GGGTCTGGCCCGCCCTAAGCAGCCCCTGGCTTCACC...CCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | TCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACCTGCAGCTCTGGGGATCCAGTaGGCCTACACCAGCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SASAAGGPAAVQTPHLPAALGIQ*AYTSKH Trigger: GTGCTTGCTGGTGTAGGCCCACTGGATCCCCAGAGC...TGCAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | GCTGTCAAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTGAAGAGCAGGCCCCACACGTaGTCCTCGGGCACTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AVKDLYSVLEWSWPDRVKSRPHT*SSGTAR Trigger: CCTGGCAGTGCCCGAGGAGCACGTGTGGGGCCTGCT...CTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTTGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAGTGGGTATAGCCCTGATTCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGAACACCTCATCTACCTaGAGGCAGGAGGCAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: AEVGIALILRLQQVGQRQNTSST*RQEAER Trigger: CCTCTCTGCCTCCTGCCTGCAGGTAGATGAGGTGTT...CTGCCGCTGGCCCACCTGCTGCAGACGCAGAATCAGGGCTATACCCACTTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | CGGGTAGTGTGTAGCGGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTGATGTGGGCCAGCGGCAGTaGAAACACCTCATCTACCTG | + |
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Preference number: 4 (lower is better) Translates to: RVVCSGSGHPGRSGYSPDVGQRQ*KHLIYL Trigger: CAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCAC...ATCAGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCCGCTACACACTACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | GGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTGATTCTGCGTCTGCAGCACCAGGTGCCAGCAGCTaGAGGGCAAACTCAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: GSGHPGRSGYSPDSASAAPGASS*RANSVM Trigger: CATCACTGAGTTTGCCCTGCAGCTGCTGGCACCTGG...TGCTGCAGACGCAGAATCAGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | CCTGATTCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTAGTCGCACTTGCCGCCTaGGAAACTGACGTCGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PDSASAAGGPAAVQTPHLVALAA*ETDVAL Trigger: AAGGGCGACGTCAGTTTCCCAGGCGGCAAGTGCGAC...TAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCAGAATCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | GCAGAAGTGGGTATAGCCCTGATTCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTACACCAGCAAGCACTaGCACCACGGTGGCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: AEVGIALILRLQQVGQRQYTSKH*HHGGLL Trigger: CAAAAGGCCACCGTGGTGCCAGTGCTTGCTGGTGTA...CTGCCGCTGGCCCACCTGCTGCAGACGCAGAATCAGGGCTATACCCACTTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACCTGGTCCTGGAGTGGAGCTaGCCTGACAGGGTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ILRLQQVGQRQCKHLIYLVLEWS*PDRVKP Trigger: TGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGAC...CAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCAGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | AAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTGAAGCCAGGGTCCCGCAGGGCCGTGTaGACCACATCTTGGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KDLYSVLEWSWPDRVKPGSRRAV*TTSWSA Trigger: GGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGA...CCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR GCA 90 bp | CTGATTCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACACCCGGTGTGGTCCATaGAGGAAGACGGGTAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LILRLQQVGQRQCKHLIYTRCGP*RKTGSV Trigger: CACACTACCCGTCTTCCTGCATGGACCACACCGGGT...GTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCAGAATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | GGCAAACTCAGTGATGACAGCTGTGAGGCCCCAGACCCGGTGTGGTCCATGCAGGCACTGGCACCACGGTaGCCTTTTGCGGATCATACA | + |
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Preference number: 4 (lower is better) Translates to: GKLSDDSCEAPDPVWSMQALAPR*PFADHT Trigger: TGTATGATCCGCAAAAGGCCACCGTGGTGCCAGTGC...CTGCATGGACCACACCGGGTCTGGGGCCTCACAGCTGTCATCACTGAGTTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | AGACGGGTAGTGTGTAGCGGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTTATTCAGTCCTGGAGTaGAGCTGGCCTGACAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RRVVCSGSGHPGRSGYSPYSVLE*SWPDRV Trigger: CACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATA...AGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCCGCTACACACTACCCGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CCA 90 bp | AAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTGAAGCCAGGGGTGTGCACCACATCTTaGTCAGCCGGGTCGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: KDLYSVLEWSWPDRVKPGVCTTS*SAGSHL Trigger: CAAGTGCGACCCGGCTGACCAAGATGTGGTGCACAC...CCCTGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS TCA 90 bp | GCGGCTGGACCGCAGCGTGTACAGCAGCGCCGGGACCCCACGCACTaGGCAGAGCGGCACGAGCACCGCGGCCGACGCGGGCCGCGCGCG | + |
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Preference number: 5 (lower is better) Translates to: AAGPQRVQQRRDPTH*AERHEHRGRRGPRA Trigger: CGCGCGCGGCCCGCGTCGGCCGCGGTGCTCGTGCCGCTCTGCTCAGTGCGTGGGGTCCCGGCGCTGCTGTACACGCTGCGGTCCAGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301490.8 ENST00000376693.3 ENST00000534054.1 |
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| CDS TCA 90 bp | CCTGTAGCCTCCGGCAAAGGGCGAGGAGTTCCCGGCCGCTGTACCTaGCGTCGCCCTTGTGCCTCCCGGTCAGGCGGCTGGACCGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: PVASGKGRGVPGRCT*RRPCASRSGGWTAA Trigger: CGCTGCGGTCCAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAGGTACAGCGGCCGGGAACTCCTCGCCCTTTGCCGGAGGCTACAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS GCA 90 bp | CCCTCTAAGCGGGAAACAGCTCAAAGGGGTGTCCCGGCCCAGGCGTaGGCGCAAGGACGCGTACGAGGGGCCCACGCGGCGAGGACGTGG | + |
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Preference number: 5 (lower is better) Translates to: PSKRETAQRGVPAQA*AQGRVRGAHAARTW Trigger: CCACGTCCTCGCCGCGTGGGCCCCTCGTACGCGTCCTTGCGCGCACGCCTGGGCCGGGACACCCCTTTGAGCTGTTTCCCGCTTAGAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS GCA 90 bp | CAAAGGGCGAGGAGTTCCCGGCCGCTGTACCTGACGTCGCCCTTGTaGCTCCCGGTCAGGCGGCTGGACCGCAGCGTGTACAGCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: QRARSSRPLYLTSPL*LPVRRLDRSVYSSA Trigger: GGCGCTGCTGTACACGCTGCGGTCCAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAGGTACAGCGGCCGGGAACTCCTCGCCCTTTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS GCA 90 bp | GGCACTGCCAGGCCCAGCTCCTCCCGGGTTTCCCGCAGGGCCGTGTaGACCACATCTTGGTCAGCCGGGTCGCACTTGCCGCCTGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: GTARPSSSRVSRRAV*TTSWSAGSHLPPGK Trigger: TTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGAGGAGCTGGGCCTGGCAGTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301490.8 ENST00000376693.3 ENST00000534054.1 |
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| CDS CCA 90 bp | GGGCCTGAGGCTCTGGGGATCCAGTGGGCCTACACCAGCAAGCACTaGCACCACGGTGGCCTTTTGCGGATCATACACAGGCCGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GPEALGIQWAYTSKH*HHGGLLRIIHRPQQ Trigger: CTGCTGCGGCCTGTGTATGATCCGCAAAAGGCCACCGTGGTGCCAGTGCTTGCTGGTGTAGGCCCACTGGATCCCCAGAGCCTCAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000301490.8 ENST00000376693.3 ENST00000534054.1 |
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| CDS CCA 90 bp | GCCACTGGCCCACCGAAGTGTCGCCTGCCTCTGCCCCTAGTTTACTaGGAGGCCCCAGGCAAGCCATGCGACCTCTGGAGGCCAGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: ATGPPKCRLPLPLVY*EAPGKPCDLWRPVY Trigger: GTAAACTGGCCTCCAGAGGTCGCATGGCTTGCCTGGGGCCTCCCAGTAAACTAGGGGCAGAGGCAGGCGACACTTCGGTGGGCCAGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 90 bp | CCCAGCTCCTCCCGGGTTTCCCGCAGGGCCGTGTGCACCACATCTTaGTCAGCCGGGTCGCACTTGCCGCCTGGGAAACTAAACAGACAC | + |
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Preference number: 5 (lower is better) Translates to: PSSSRVSRRAVCTTS*SAGSHLPPGKLNRH Trigger: GTGTCTGTTTAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGAGGAGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS-3UTR CAA 90 bp | AGACGGGTAGTGTGTAGCGGAAGTGGCCACCCCGGCAGAAGTGGGTATAGCCCTAAACTGACGTCGCCCTaGTGCCTCCCGGTCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RRVVCSGSGHPGRSGYSPKLTSP*CLPVRR Trigger: CCGCCTGACCGGGAGGCACAAGGGCGACGTCAGTTT...AGGGCTATACCCACTTCTGCCGGGGTGGCCACTTCCGCTACACACTACCCGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS-3UTR CAA 90 bp | GGCAAACTCAGTGATGACAGCTGTGAGGCCCCAGACCCGGTGTGGTCCATGCAGTCAGCCGGGTCGCACTaGCCGCCTGGGAAACTGACG | + |
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Preference number: 5 (lower is better) Translates to: GKLSDDSCEAPDPVWSMQSAGSH*PPGKLT Trigger: CGTCAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGA...CTGCATGGACCACACCGGGTCTGGGGCCTCACAGCTGTCATCACTGAGTTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS TCA 90 bp | GGCCCCAGGCAAGCCATGCGACCTCTGGAGGCCAGTTTACCTCCCTaGGCAATGGGGATAAGGAAGAGAGGCCCGGGACAGCGCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: GPRQAMRPLEASLPP*AMGIRKRGPGQRRI Trigger: TATCCTGCGCTGTCCCGGGCCTCTCTTCCTTATCCCCATTGCTCAGGGAGGTAAACTGGCCTCCAGAGGTCGCATGGCTTGCCTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS-3UTR CAA 90 bp | GCAGAAGTGGGTATAGCCCTGATTCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGCGTGTGCACCACATCTaGGTCAGCCGGGTCGCACTT | + |
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Preference number: 5 (lower is better) Translates to: AEVGIALILRLQQVGQRQRVHHI*VSRVAL Trigger: AAGTGCGACCCGGCTGACCAAGATGTGGTGCACACG...CTGCCGCTGGCCCACCTGCTGCAGACGCAGAATCAGGGCTATACCCACTTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS CCA 90 bp | CACTTGCCGCCTGGGAAACTAAACAGACACAAGGAGTCTGGTCCTTaGACTCTTGGGGCCACGGAGAGGTCGGGGTATCGGCAGTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: HLPPGKLNRHKESGP*TLGATERSGYRQCG Trigger: CCCGCACTGCCGATACCCCGACCTCTCCGTGGCCCCAAGAGTCCAAGGACCAGACTCCTTGTGTCTGTTTAGTTTCCCAGGCGGCAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 90 bp | CGGGTCGCACTTGCCGCCTGGGAAACTAAACAGACACAAGGAGTCTaGTCCTTGGACTCTTGGGGCCACGGAGAGGTCGGGGTATCGGCA | + |
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Preference number: 5 (lower is better) Translates to: RVALAAWETKQTQGV*SLDSWGHGEVGVSA Trigger: TGCCGATACCCCGACCTCTCCGTGGCCCCAAGAGTCCAAGGACCAGACTCCTTGTGTCTGTTTAGTTTCCCAGGCGGCAAGTGCGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS-3UTR CAA 90 bp | TCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTGCAAACACCTCATCTACCTGCACACCACGGTGGCCTTTaGCGGATCATACACAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SASAAGGPAAVQTPHLPAHHGGL*RIIHRP Trigger: CGGCCTGTGTATGATCCGCAAAAGGCCACCGTGGTG...TGCAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS CCA 90 bp | GGCCGTGTGCACCACATCTTGGTCAGCCGGGTCGCACTTGCCGCCTaGGAAACTAAACAGACACAAGGAGTCTGGTCCTTGGACTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: GRVHHILVSRVALAA*ETKQTQGVWSLDSW Trigger: CCAAGAGTCCAAGGACCAGACTCCTTGTGTCTGTTTAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS-3UTR CAA 90 bp | GTCAAAGACCTTTATTCAGTCCTGGAGTGGAGCTGGCCTGACAGGGTGAAGCCACTCACCTCCTCCGAGTaGGGCCTGAGGCTCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VKDLYSVLEWSWPDRVKPLTSSE*GLRLWG Trigger: TCCCCAGAGCCTCAGGCCCAACTCGGAGGAGGTGAG...TGGCTTCACCCTGTCAGGCCAGCTCCACTCCAGGACTGAATAAAGGTCTTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301490.8 |
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| CDS TCA 72 bp | CCGCAGCGTGTACAGCAGCGCCGGGACCCCACGCACTaGGCAGAGCGGCACGAGCACCGCGGCCGACGCGGG | + |
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Preference number: 6 (lower is better) Translates to: PQRVQQRRDPTH*AERHEHRGRRG Trigger: CCCGCGTCGGCCGCGGTGCTCGTGCCGCTCTGCTCAGTGCGTGGGGTCCCGGCGCTGCTGTACACGCTGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301490.8 ENST00000376693.3 ENST00000534054.1 |
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| CDS GCA 72 bp | CGGGAAACAGCTCAAAGGGGTGTCCCGGCCCAGGCGTaGGCGCAAGGACGCGTACGAGGGGCCCACGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RETAQRGVPAQA*AQGRVRGAHAA Trigger: CGCCGCGTGGGCCCCTCGTACGCGTCCTTGCGCGCACGCCTGGGCCGGGACACCCCTTTGAGCTGTTTCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS TCA 72 bp | CCGGCAGGTGCACCGGGGCCGACGGACACGGATCGCTaGCCTCTCGCTGCAGCCCTTGGGCGGAGGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: PAGAPGPTDTDR*PLAAALGRRDS Trigger: AGAGTCCCTCCGCCCAAGGGCTGCAGCGAGAGGTCAGCGATCCGTGTCCGTCGGCCCCGGTGCACCTGCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CAA 72 bp | GCGAGGAGTTCCCGGCCGCTGTACCTGACGTCGCCCTaGTGCCTCCCGGTCAGGCGGCTGGACCGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: ARSSRPLYLTSP*CLPVRRLDRSV Trigger: CACGCTGCGGTCCAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAGGTACAGCGGCCGGGAACTCCTCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS TCA 72 bp | TCCGGCAAAGGGCGAGGAGTTCCCGGCCGCTGTACCTaGCGTCGCCCTTGTGCCTCCCGGTCAGGCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGKGRGVPGRCT*RRPCASRSGGW Trigger: CCAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAGGTACAGCGGCCGGGAACTCCTCGCCCTTTGCCGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS GCA 72 bp | ACCGGGGCCGACGGACACGGATCGCTGACCTCTCGCTaGAGCCCTTGGGCGGAGGGACTCTCCCCAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: TGADGHGSLTSR*SPWAEGLSPDP Trigger: TGGGTCTGGGGAGAGTCCCTCCGCCCAAGGGCTGCAGCGAGAGGTCAGCGATCCGTGTCCGTCGGCCCCGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CAA 90 bp | CGGCAAAGGGCGAGGAGTTCCCGGCCGCTGTACCTGACGTCGCCCTaGTGCCTCCCGGTCAGGCGGCTGGACCGCAGCGTGTACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RQRARSSRPLYLTSP*CLPVRRLDRSVYSS Trigger: GCTGCTGTACACGCTGCGGTCCAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAGGTACAGCGGCCGGGAACTCCTCGCCCTTTGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CAA 90 bp | GCCCAGCTCCTCCCGGGTTTCCCGCAGGGCCGTGTGCACCACATCTaGGTCAGCCGGGTCGCACTTGCCGCCTGGGAAACTGACGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: AQLLPGFPQGRVHHI*VSRVALAAWETDVA Trigger: GGCGACGTCAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGAGGAGCTGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301490.8 ENST00000376693.3 |
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| CDS GCA 72 bp | AGGCCCAGCTCCTCCCGGGTTTCCCGCAGGGCCGTGTaGACCACATCTTGGTCAGCCGGGTCGCACTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RPSSSRVSRRAV*TTSWSAGSHLP Trigger: CGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGAGGAGCTGGGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301490.8 ENST00000376693.3 ENST00000534054.1 |
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| CDS GCA 72 bp | AGGAGTTCCCGGCCGCTGTACCTGACGTCGCCCTTGTaGCTCCCGGTCAGGCGGCTGGACCGCAGCGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: RSSRPLYLTSPL*LPVRRLDRSVY Trigger: GTACACGCTGCGGTCCAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAGGTACAGCGGCCGGGAACTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS GCA 72 bp | TCGCACTTGCCGCCTGGGAAACTGACGTCGCCCTTGTaGCTCCCGGTCAGGCGGCTGGACCGCAGCGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SHLPPGKLTSPL*LPVRRLDRSVY Trigger: GTACACGCTGCGGTCCAGCCGCCTGACCGGGAGGCACAAGGGCGACGTCAGTTTCCCAGGCGGCAAGTGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301490.8 ENST00000376693.3 |
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| CDS GCA 72 bp | TTACGGAGGCGGAAACCGAGGCTCGAAGGGGCTAAGTaGCCTGCCAGAGGTCCCTGCCAGCCCCGGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LRRRKPRLEGAK*PARGPCQPRAP Trigger: AGGAGCCCGGGGCTGGCAGGGACCTCTGGCAGGGCACTTAGCCCCTTCGAGCCTCGGTTTCCGCCTCCGTAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 72 bp | TCCCGGGTTTCCCGCAGGGCCGTGTGCACCACATCTTaGTCAGCCGGGTCGCACTTGCCGCCTGGGAAACTG | + |
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Preference number: 6 (lower is better) Translates to: SRVSRRAVCTTS*SAGSHLPPGKL Trigger: CAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301490.8 ENST00000376693.3 |
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| CDS CCA 72 bp | CCCCAGCTCACCTCCTCCGAGTTGGGCCTGAGGCTCTaGGGATCCAGTGGGCCTACACCAGCAAGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: PQLTSSELGLRL*GSSGPTPASTG Trigger: GCCAGTGCTTGCTGGTGTAGGCCCACTGGATCCCCAGAGCCTCAGGCCCAACTCGGAGGAGGTGAGCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301490.8 ENST00000534054.1 |
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| CDS CAA 72 bp | CTCCCGGGTTTCCCGCAGGGCCGTGTGCACCACATCTaGGTCAGCCGGGTCGCACTTGCCGCCTGGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: LPGFPQGRVHHI*VSRVALAAWET Trigger: AGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301490.8 ENST00000376693.3 ENST00000534054.1 |
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| CDS CCA 72 bp | CCACCGAAGTGTCGCCTGCCTCTGCCCCTAGTTTACTaGGAGGCCCCAGGCAAGCCATGCGACCTCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PPKCRLPLPLVY*EAPGKPCDLWR Trigger: CCTCCAGAGGTCGCATGGCTTGCCTGGGGCCTCCCAGTAAACTAGGGGCAGAGGCAGGCGACACTTCGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 72 bp | TCCCGGGTTTCCCGCAGGGCCGTGTGCACCACATCTTaGTCAGCCGGGTCGCACTTGCCGCCTGGGAAACTA | + |
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Preference number: 6 (lower is better) Translates to: SRVSRRAVCTTS*SAGSHLPPGKL Trigger: TAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CAA 72 bp | GCCGTGTGCACCACATCTTGGTCAGCCGGGTCGCACTaGCCGCCTGGGAAACTGACGTCGCCCTTGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: AVCTTSWSAGSH*PPGKLTSPLCL Trigger: GAGGCACAAGGGCGACGTCAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301490.8 ENST00000376693.3 |
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| CDS CAA 90 bp | GCCCAGCTCCTCCCGGGTTTCCCGCAGGGCCGTGTGCACCACATCTaGGTCAGCCGGGTCGCACTTGCCGCCTGGGAAACTAAACAGACA | + |
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Preference number: 6 (lower is better) Translates to: AQLLPGFPQGRVHHI*VSRVALAAWETKQT Trigger: TGTCTGTTTAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGAAACCCGGGAGGAGCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS TCA 72 bp | CTCATATCCCCCAGCTCACCTCCTCCGAGTTGGGCCTaGGGCTCTGGGGATCCAGTGGGCCTACACCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LISPSSPPPSWA*GSGDPVGLHQQ Trigger: TTGCTGGTGTAGGCCCACTGGATCCCCAGAGCCTCAGGCCCAACTCGGAGGAGGTGAGCTGGGGGATATGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301490.8 ENST00000534054.1 |
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| CDS CCA 72 bp | ACCTCATCTACCTCCTCCGAGTTGGGCCTGAGGCTCTaGGGATCCAGTGGGCCTACACCAGCAAGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: TSSTSSELGLRL*GSSGPTPASTG Trigger: GCCAGTGCTTGCTGGTGTAGGCCCACTGGATCCCCAGAGCCTCAGGCCCAACTCGGAGGAGGTAGATGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376693.3 |
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| CDS CAA 90 bp | TCCCGCAGGGCCGTGTGCACCACATCTTGGTCAGCCGGGTCGCACTaGCCGCCTGGGAAACTAAACAGACACAAGGAGTCTGGTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SRRAVCTTSWSAGSH*PPGKLNRHKESGPW Trigger: CCAAGGACCAGACTCCTTGTGTCTGTTTAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGCCCTGCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS GCA 72 bp | CTGATTCTGCGTCTGCAGCAGGTGGGCCAGCGGCAGTaGAAACACCTCATCTACCTCCTCCGAGTTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LILRLQQVGQRQ*KHLIYLLRVGP Trigger: AGGCCCAACTCGGAGGAGGTAGATGAGGTGTTTGCACTGCCGCTGGCCCACCTGCTGCAGACGCAGAATCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376693.3 |
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| CDS GCA 72 bp | CTGCCCCTAGTTTACTGGGAGGCCCCAGGCAAGCCATaGGACCTCTGGAGGCCAGTTTACCTCCCTGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LPLVYWEAPGKP*DLWRPVYLPEQ Trigger: TTGCTCAGGGAGGTAAACTGGCCTCCAGAGGTCGCATGGCTTGCCTGGGGCCTCCCAGTAAACTAGGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 72 bp | GCTCTGGGGATCCAGTGGGCCTACACCAGCAAGCACTaGCACCACGGTGGCCTTTTGCGGATCATACACAGG | + |
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Preference number: 6 (lower is better) Translates to: ALGIQWAYTSKH*HHGGLLRIIHR Trigger: CCTGTGTATGATCCGCAAAAGGCCACCGTGGTGCCAGTGCTTGCTGGTGTAGGCCCACTGGATCCCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000301490.8 ENST00000376693.3 ENST00000534054.1 |
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| CDS TCA 72 bp | GTGCAAACACCTCATCTACCTCCTCCGAGTTGGGCCTaGGGCTCTGGGGATCCAGTGGGCCTACACCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VQTPHLPPPSWA*GSGDPVGLHQQ Trigger: TTGCTGGTGTAGGCCCACTGGATCCCCAGAGCCTCAGGCCCAACTCGGAGGAGGTAGATGAGGTGTTTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376693.3 |
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| CDS TCA 72 bp | CAAGCCATGCGACCTCTGGAGGCCAGTTTACCTCCCTaGGCAATGGGGATAAGGAAGAGAGGCCCGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QAMRPLEASLPP*AMGIRKRGPGQ Trigger: CTGTCCCGGGCCTCTCTTCCTTATCCCCATTGCTCAGGGAGGTAAACTGGCCTCCAGAGGTCGCATGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 72 bp | ACTAAACAGACACAAGGAGTCTGGTCCTTGGACTCTTaGGGCCACGGAGAGGTCGGGGTATCGGCAGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: TKQTQGVWSLDS*GHGEVGVSAVR Trigger: CCGCACTGCCGATACCCCGACCTCTCCGTGGCCCCAAGAGTCCAAGGACCAGACTCCTTGTGTCTGTTTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 72 bp | CTTGCCGCCTGGGAAACTAAACAGACACAAGGAGTCTaGTCCTTGGACTCTTGGGGCCACGGAGAGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: LAAWETKQTQGV*SLDSWGHGEVG Trigger: CCCGACCTCTCCGTGGCCCCAAGAGTCCAAGGACCAGACTCCTTGTGTCTGTTTAGTTTCCCAGGCGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 72 bp | CCTGGGAAACTAAACAGACACAAGGAGTCTGGTCCTTaGACTCTTGGGGCCACGGAGAGGTCGGGGTATCGG | + |
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Preference number: 6 (lower is better) Translates to: PGKLNRHKESGP*TLGATERSGYR Trigger: CCGATACCCCGACCTCTCCGTGGCCCCAAGAGTCCAAGGACCAGACTCCTTGTGTCTGTTTAGTTTCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CAA 72 bp | GCCGTGTGCACCACATCTTGGTCAGCCGGGTCGCACTaGCCGCCTGGGAAACTAAACAGACACAAGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: AVCTTSWSAGSH*PPGKLNRHKES Trigger: AGACTCCTTGTGTCTGTTTAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTGCACACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS CCA 72 bp | CACCACATCTTGGTCAGCCGGGTCGCACTTGCCGCCTaGGAAACTAAACAGACACAAGGAGTCTGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HHILVSRVALAA*ETKQTQGVWSL Trigger: CAAGGACCAGACTCCTTGTGTCTGTTTAGTTTCCCAGGCGGCAAGTGCGACCCGGCTGACCAAGATGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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| CDS TCA 72 bp | ATACCCAAATTCGGCCTATGGTGGCCCCAGCAACACTaGCATTGTCCTCAGGATGTTCTTAATTCCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: IPKFGLWWPQQH*HCPQDVLNSRR Trigger: CCGGCGGGAATTAAGAACATCCTGAGGACAATGTCAGTGTTGCTGGGGCCACCATAGGCCGAATTTGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534054.1 |
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