RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT18 (Homo sapiens)

Ensembl gene IDs: ENSG00000275074

Ensembl transcript IDs: ENST00000611621.2, ENST00000613958.1

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTGCCTGGCTTGCTGGCGATACTGGGCGGCTAGTTCAACCAGGTaGAGGATGTCATGGGCTCGCAGCGGAGTGGGCAGGGAGGTCCGT +
Preference number: 1 (lower is better)
Translates to: GCLACWRYWAASSTR*RMSWARSGVGREVR
Trigger: ACGGACCTCCCTGCCCACTCCGCTGCGAGCCCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 90 bp GCTCGCAGCGGAGTGGGCAGGGAGGTCCGTGGGTACCAGGCAGCCTaGAGGGACTCCGCATCGGCCTCCTTGGAAGTCTTGAGAATTCCA +
Preference number: 1 (lower is better)
Translates to: ARSGVGREVRGYQAA*RDSASASLEVLRIP
Trigger: TGGAATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTACCCACGGACCTCCCTGCCCACTCCGCTGCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 90 bp TGCTGGCGATACTGGGCGGCTAGTTCAACCAGGTGCAGGATGTCATaGGCTCGCAGCGGAGTGGGCAGGGAGGTCCGTGGGTACCAGGCA +
Preference number: 1 (lower is better)
Translates to: CWRYWAASSTRCRMS*ARSGVGREVRGYQA
Trigger: TGCCTGGTACCCACGGACCTCCCTGCCCACTCCGCTGCGAGCCCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 90 bp TGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTaGTCGCCAGCCTCTTGCCTCCCTCAGAGGGAGACAAGTCCGCAC +
Preference number: 1 (lower is better)
Translates to: WGPGEPPLLPMQQDP*SPASCLPQRETSPH
Trigger: GTGCGGACTTGTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR CCA 90 bp CCCAGGTGCTGCAGTCCAAGCAACCCCTTGATCTCCACCACCAAGTaGTGCAGGGTCAGACACTCCTGCAGCAGCCGCAGGACGGCCATC +
Preference number: 1 (lower is better)
Translates to: PRCCSPSNPLISTTK*CRVRHSCSSRRTAI
Trigger: GATGGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACTGCAGCACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 90 bp CAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATaGAACAAGATCCCTGATCGCCAGCCTCTTGCCTCCCTCAGAGGG +
Preference number: 1 (lower is better)
Translates to: QSISPGDQESRPCSQ*NKIPDRQPLASLRG
Trigger: CCCTCTGAGGGAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR GCA 90 bp CTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTaGCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCC +
Preference number: 1 (lower is better)
Translates to: LFTQQRAPPSGDLPQ*PSMLEGPGRIRMQA
Trigger: GGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR GCA 90 bp AACCCCTTGATCTCCACCACCAAGTGGTGCAGGGTCAGACACTCCTaGAGCAGCCGCAGGACGGCCATCTTCATGCCACCCCTCTGCTCC +
Preference number: 1 (lower is better)
Translates to: NPLISTTKWCRVRHS*SSRRTAIFMPPLCS
Trigger: GGAGCAGAGGGGTGGCATGAAGATGGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGAGATCAAGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 90 bp AAGGTAGCCACGAGCCGCTGGCAGACCAGATCACAGGGTAGCTCTTaGGGCAGAATGAGAGGGTGCCTGGCTTGCTGGCGATACTGGGCG +
Preference number: 1 (lower is better)
Translates to: KVATSRWQTRSQGSS*GRMRGCLACWRYWA
Trigger: CGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGATCTGGTCTGCCAGCGGCTCGTGGCTACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 90 bp CGAGCCGCTGGCAGACCAGATCACAGGGTAGCTCTTGGGGCAGAATaGGAGGGTGCCTGGCTTGCTGGCGATACTGGGCGGCTAGTTCAA +
Preference number: 1 (lower is better)
Translates to: RAAGRPDHRVALGAE*EGAWLAGDTGRLVQ
Trigger: TTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGATCTGGTCTGCCAGCGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 90 bp AGGTGCTGCAGTCCAAGCAACCCCTTGATCTCCACCACCAAGTGGTaGAGGGTCAGACACTCCTGCAGCAGCCGCAGGACGGCCATCTTC +
Preference number: 1 (lower is better)
Translates to: RCCSPSNPLISTTKW*RVRHSCSSRRTAIF
Trigger: GAAGATGGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACTGCAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 90 bp AGCTCTTGGGGCAGAATGAGAGGGTGCCTGGCTTGCTGGCGATACTaGGCGGCTAGTTCAACCAGGTGCAGGATGTCATGGGCTCGCAGC +
Preference number: 1 (lower is better)
Translates to: SSWGRMRGCLACWRY*AASSTRCRMSWARS
Trigger: GCTGCGAGCCCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 90 bp CTGTGTGGAGAGAAGTGCAGCTCTGGCAGAGTCAACAGACATCCCTaGCCCAGGAGAGAGGCCCCCAGCCCAAAGGCTGGAATCTGCCCA +
Preference number: 1 (lower is better)
Translates to: LCGEKCSSGRVNRHP*PRREAPSPKAGICP
Trigger: TGGGCAGATTCCAGCCTTTGGGCTGGGGGCCTCTCTCCTGGGTCAGGGATGTCTGTTGACTCTGCCAGAGCTGCACTTCTCTCCACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 90 bp AATGCTCCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTaGTCCCAATGCAACAAGATCCCTGATCGCCAGCCTCTTGCCTCC +
Preference number: 1 (lower is better)
Translates to: NAPQSISPGDQESRP*SQCNKIPDRQPLAS
Trigger: GGAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGGAGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR GCA 90 bp TGGCAGACCAGATCACAGGGTAGCTCTTGGGGCAGAATGAGAGGGTaGCTGGCTTGCTGGCGATACTGGGCGGCTAGTTCAACCAGGTGC +
Preference number: 1 (lower is better)
Translates to: WQTRSQGSSWGRMRG*LACWRYWAASSTRC
Trigger: GCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGATCTGGTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 90 bp AACACCCACACTGTCTGGGCGCTGGTAAAGGTAGCCACGAGCCGCTaGCAGACCAGATCACAGGGTAGCTCTTGGGGCAGAATGAGAGGG +
Preference number: 1 (lower is better)
Translates to: NTHTVWALVKVATSR*QTRSQGSSWGRMRG
Trigger: CCCTCTCATTCTGCCCCAAGAGCTACCCTGTGATCTGGTCTGCCAGCGGCTCGTGGCTACCTTTACCAGCGCCCAGACAGTGTGGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 90 bp CATCACTGTGATCTCGGCCCAGGTGCTGCAGTCCAAGCAACCCCTTaGTCTCCACCACCAAGTGGTGCAGGGTCAGACACTCCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: HHCDLGPGAAVQATP*SPPPSGAGSDTPAA
Trigger: TGCTGCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACTGCAGCACCTGGGCCGAGATCACAGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 90 bp CCTCCCCCACCTCTCTATCTGTTCACTGGGACAACAGAGGATCCCTaGAGCCGCTGGAGGAGCTGGCTTTGCAGGTCTTCCTCCATCACC +
Preference number: 1 (lower is better)
Translates to: PPPPLYLFTGTTEDP*SRWRSWLCRSSSIT
Trigger: GGTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCAGCGGCTTCAGGGATCCTCTGTTGTCCCAGTGAACAGATAGAGAGGTGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 90 bp TTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATaGAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGC +
Preference number: 1 (lower is better)
Translates to: FPSAPPCSKGLEGSE*RPFPRTAQNVMRRC
Trigger: GCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR CCA 90 bp TCACAGGGTAGCTCTTGGGGCAGAATGAGAGGGTGCCTGGCTTGCTaGCGATACTGGGCGGCTAGTTCAACCAGGTGCAGGATGTCATGG +
Preference number: 1 (lower is better)
Translates to: SQGSSWGRMRGCLAC*RYWAASSTRCRMSW
Trigger: CCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 90 bp AGATCACAGGGTAGCTCTTGGGGCAGAATGAGAGGGTGCCTGGCTTaGTGGCGATACTGGGCGGCTAGTTCAACCAGGTGCAGGATGTCA +
Preference number: 1 (lower is better)
Translates to: RSQGSSWGRMRGCLA*WRYWAASSTRCRMS
Trigger: TGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 90 bp TCCCTGGGCTCCGAAAAGCCACGGTCACCAGCACATTCAAACAGATaGCATCACTGTGATCTCGGCCCAGGTGCTGCAGTCCAAGCAACC +
Preference number: 1 (lower is better)
Translates to: SLGSEKPRSPAHSNR*HHCDLGPGAAVQAT
Trigger: GGTTGCTTGGACTGCAGCACCTGGGCCGAGATCACAGTGATGGCATCTGTTTGAATGTGCTGGTGACCGTGGCTTTTCGGAGCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 90 bp CGAAAAGCCACGGTCACCAGCACATTCAAACAGATGCCATCACTGTaGTCTCGGCCCAGGTGCTGCAGTCCAAGCAACCCCTTGATCTCC +
Preference number: 1 (lower is better)
Translates to: RKATVTSTFKQMPSL*SRPRCCSPSNPLIS
Trigger: GGAGATCAAGGGGTTGCTTGGACTGCAGCACCTGGGCCGAGATCACAGTGATGGCATCTGTTTGAATGTGCTGGTGACCGTGGCTTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 90 bp GCGTGCCCTCAGGGTAGTCAGGTCCTGAGCTTTGGACTCCTCGCTTaGTTAAAGGCACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTC +
Preference number: 1 (lower is better)
Translates to: ACPQGSQVLSFGLLA*LKALSLVQSRGMLL
Trigger: GAGGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCTGAGGGCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp GGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCGCCAGCTGGAGGGAGCACGGCTaGCTAGCTCCCTGTCACCTC +
Preference number: 2 (lower is better)
Translates to: GTRRAAPAPNATRSLIASWREHG*LAPCHL
Trigger: GAGGTGACAGGGAGCTAGGCAGCCGTGCTCCCTCCA...GCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp GCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCCCAAAGGCTGGAATCTaGCCATGCCAGGCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: APHPPGKRRQRALRVVRSPKAGI*PCQAVP
Trigger: TGGCACAGCCTGGCATGGGCAGATTCCAGCCTTTGG...GGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR GCA 90 bp TGCAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGCCACTGGGGGGGGTACCAGGCAGCCTaGAGGGACTCCGCATCGGCC +
Preference number: 2 (lower is better)
Translates to: CRPFPRTAQNVMRRCHWGGYQAA*RDSASA
Trigger: GGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTACCC...CCCCCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCA
64% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CCA 90 bp CCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCGTAGCCACGAGCCGCTaGCAGACCAGATCACAGGGT +
Preference number: 2 (lower is better)
Translates to: PSPWEEASACPQGSQVLSVATSR*QTRSQG
Trigger: ACCCTGTGATCTGGTCTGCCAGCGGCTCGTGGCTAC...GCTCAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CAA 90 bp GTCCGTGGGTACCAGGCAGCCTGCAGGGACTCCGCATCGGCCTCCTaGGAAGTCTTGAGAATTCCACCTGGGGGAGATGTGGGGGATGGG +
Preference number: 2 (lower is better)
Translates to: VRGYQAACRDSASAS*EVLRIPPGGDVGDG
Trigger: CCCATCCCCCACATCTCCCCCAGGTGGAATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTACCCACGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CCA 90 bp CCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTAGCTCCCCATCCCCCTaGGAAGAGGCGTCAGCGTGC +
Preference number: 2 (lower is better)
Translates to: PQCPSMLEGPGRIRMQAFSSPSP*EEASAC
Trigger: GCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCT...AAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR CCA 90 bp CAGCCGCAGGACGGCCATCTTCATGCCACCCCTCTGCTCCATAGGGTCGAGGCCGCTTGCTGGCGATACTaGGCGGCTAGTTCAACCAGG +
Preference number: 2 (lower is better)
Translates to: QPQDGHLHATPLLHRVEAACWRY*AASSTR
Trigger: CCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGC...GGCCTCGACCCTATGGAGCAGAGGGGTGGCATGAAGATGGCCGTCCTGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR GCA 90 bp CCCACTAACACCCACACTGTCTGGGCGCTGGTAAAGGTAGCCACGAGCCGCTGGAGATGCCACTGGGGGTaGAGAAAGCTCCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: PTNTHTVWALVKVATSRWRCHWG*RKLPIP
Trigger: GGGGATGGGGAGCTTTCTGCACCCCCAGTGGCATCT...CCAGCGGCTCGTGGCTACCTTTACCAGCGCCCAGACAGTGTGGGTGTTAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR GCA 90 bp GGTCAGACACTCCTGCAGCAGCCGCAGGACGGCCATCTTCATGCCACCCCTCTGCTTTACTCAGCAACGTaGTCCTCCCTCGGGGGACCT +
Preference number: 2 (lower is better)
Translates to: GQTLLQQPQDGHLHATPLLYSAT*SSLGGP
Trigger: AGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAG...CAGAGGGGTGGCATGAAGATGGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR TCA 90 bp CACTGTCTGGGCGCTGGTAAAGGTAGCCACGAGCCGCTGGCAGACCAGATCACAGCTCTTGGGGCAGAATaGGAGGGTGCCTGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: HCLGAGKGSHEPLADQITALGAE*EGAWLA
Trigger: AGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGC...TGTGATCTGGTCTGCCAGCGGCTCGTGGCTACCTTTACCAGCGCCCAGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR GCA 90 bp CCTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCGCCCCTGCTCCCAATaGAACAAGATCCCTGATCGC +
Preference number: 2 (lower is better)
Translates to: PSPVPLHARRAWKDQNAGRPCSQ*NKIPDR
Trigger: GCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCG...GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp GCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCTTTGGACTCCTCGCTTGGCAGGAGAGCCGCCCCTaGTCCCAATGCAACAAGATC +
Preference number: 2 (lower is better)
Translates to: ASACPQGSQVLSFGLLAWQESRP*SQCNKI
Trigger: GATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTG...CCAAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCTGAGGGCACGCTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp GGATCCCTGAAGCCGCTGGAGGAGCTGGCTTTGCAGGTCTTCCTCCATCACCTTAGAGGGTGCCTGGCTTaGTGGCGATACTGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: GSLKPLEELALQVFLHHLRGCLA*WRYWAA
Trigger: AGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCT...AAGGTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCAGCGGCTTCAGGGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CCA 90 bp CCCCACCTCTCTATCTGTTCACTGGGACAACAGAGGATCCCTGAAGCCGCTGGAAGCTCCCCATCCCCCTaGGAAGAGGCGTCAGCGTGC +
Preference number: 2 (lower is better)
Translates to: PHLSICSLGQQRIPEAAGSSPSP*EEASAC
Trigger: GCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCT...TCCAGCGGCTTCAGGGATCCTCTGTTGTCCCAGTGAACAGATAGAGAGGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CCA 90 bp GGTCAGACACTCCTGCAGCAGCCGCAGGACGGCCATCTTCATGCCACCCCTCTGAACACCCACACTGTCTaGGCGCTGGTAAAGGTAGCC +
Preference number: 2 (lower is better)
Translates to: GQTLLQQPQDGHLHATPLNTHTV*ALVKVA
Trigger: GGCTACCTTTACCAGCGCCCAGACAGTGTGGGTGTT...CAGAGGGGTGGCATGAAGATGGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR GCA 90 bp CCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCAGGCACTGTCCCTTGTaGAATCTAGAGGAATGCTCC +
Preference number: 2 (lower is better)
Translates to: PSPWEEASACPQGSQVLSRHCPL*NLEECS
Trigger: GGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCT...GCTCAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp AGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGATGCCACTGGGGGTaGAGAAAGCTCCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: SAPPCSKGLEGSECRPFPRCHWG*RKLPIP
Trigger: GGGGATGGGGAGCTTTCTGCACCCCCAGTGGCATCT...TGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp GCTGGCGATACTGGGCGGCTAGTTCAACCAGGTGCAGGATGTCATGGGCTCGCAGCTGGAATCTGCCCATaGCAGGCTGTGCCAGCCATA +
Preference number: 2 (lower is better)
Translates to: AGDTGRLVQPGAGCHGLAAGICP*QAVPAI
Trigger: TATGGCTGGCACAGCCTGGCATGGGCAGATTCCAGC...TGCGAGCCCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR TCA 90 bp AACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTGCCATGCAACAAGATCCCTaGTCGCCAGCCTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: NTSLLSNVLLPRGTFPSAMQQDP*SPASCL
Trigger: GAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCAT...GGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp CACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGGGGATGGAGGGAGCACGGCTaGCTAGCTCCCTGTCACCTC +
Preference number: 2 (lower is better)
Translates to: HCPLCNLEECSSKHLSWGWREHG*LAPCHL
Trigger: GAGGTGACAGGGAGCTAGGCAGCCGTGCTCCCTCCA...TCCCCAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAAGGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR GCA 90 bp GTACCAGGCAGCCTGCAGGGACTCCGCATCGGCCTCCTTGGAAGTCTTGAGAATCTGTGTGGAGAGAAGTaGAGCTCTGGCAGAGTCAAC +
Preference number: 2 (lower is better)
Translates to: VPGSLQGLRIGLLGSLENLCGEK*SSGRVN
Trigger: GTTGACTCTGCCAGAGCTGCACTTCTCTCCACACAG...ATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CCA 90 bp AGTAACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTCATGCTCGAAGGGCCTaGAAGGATCAGAATGCAGGC +
Preference number: 2 (lower is better)
Translates to: SNTSLLSNVLLPRGTFPSHARRA*KDQNAG
Trigger: GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATG...ACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR CCA 90 bp ATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTTTTGGACTCCTCGCTTaGTTAAAGGCACTGTCCCTT +
Preference number: 2 (lower is better)
Translates to: ISPGDQESRPCSQCNKIPFGLLA*LKALSL
Trigger: AAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAA...AGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR CCA 90 bp AACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTGCCTCAGGTCCTGAGCTTTaGACTCCTCGCTTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: NTSLLSNVLLPRGTFPSASGPEL*TPRLVK
Trigger: TTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGA...GGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR CCA 90 bp CAGCACATTCAAACAGATGCCATCACTGTGATCTCGGCCCAGGTGCTGCAGTCCCTTGAGAATTCCACCTaGGGGAGATGTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: QHIQTDAITVISAQVLQSLENST*GRCGGW
Trigger: CCATCCCCCACATCTCCCCCAGGTGGAATTCTCAAG...GGACTGCAGCACCTGGGCCGAGATCACAGTGATGGCATCTGTTTGAATGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR TCA 90 bp TCAGGTCCTGAGCTTTGGACTCCTCGCTTGGTTAAAGGCACTGTCCCTTGTGCAATGCAACAAGATCCCTaGTCGCCAGCCTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: SGPELWTPRLVKGTVPCAMQQDP*SPASCL
Trigger: GAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCAT...TGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR CCA 90 bp TTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGGGGACCAGGAGAGACCTCACCGAGGAGCTaGGGGAAAGGTGTCAACTGG +
Preference number: 2 (lower is better)
Translates to: LCNLEECSSKHLSWGPGETSPRS*GKGVNW
Trigger: CCAGTTGACACCTTTCCCCCAGCTCCTCGGTGAGGT...CTCTCCTGGTCCCCAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 72 bp CAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTaGCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGA +
Preference number: 3 (lower is better)
Translates to: QQRAPPSGDLPQ*PSMLEGPGRIR
Trigger: TCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR CCA 72 bp GCCTCTTGCCTCCCTCAGAGGGAGACAAGTCCGCACTaGAGGGAGCACGGCTGCCTAGCTCCCTGTCACCTC +
Preference number: 3 (lower is better)
Translates to: ASCLPQRETSPH*REHGCLAPCHL
Trigger: GAGGTGACAGGGAGCTAGGCAGCCGTGCTCCCTCCAGTGCGGACTTGTCTCCCTCTGAGGGAGGCAAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR CCA 72 bp TACTGGGCGGCTAGTTCAACCAGGTGCAGGATGTCATaGGCTCGCAGCGGAGTGGGCAGGGAGGTCCGTGGG +
Preference number: 3 (lower is better)
Translates to: YWAASSTRCRMS*ARSGVGREVRG
Trigger: CCCACGGACCTCCCTGCCCACTCCGCTGCGAGCCCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 72 bp TCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATaGAACAAGATCCCTGATCGCCAGCCTCTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: SPGDQESRPCSQ*NKIPDRQPLAS
Trigger: GGAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR GCA 72 bp GCTTGCTGGCGATACTGGGCGGCTAGTTCAACCAGGTaGAGGATGTCATGGGCTCGCAGCGGAGTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: ACWRYWAASSTR*RMSWARSGVGR
Trigger: CCTGCCCACTCCGCTGCGAGCCCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 72 bp TCCCTGACCCAGGAGAGAGGCCCCCAGCCCAAAGGCTaGAATCTGCCCATGCCAGGCTGTGCCAGCCATAAC +
Preference number: 3 (lower is better)
Translates to: SLTQERGPQPKG*NLPMPGCASHN
Trigger: GTTATGGCTGGCACAGCCTGGCATGGGCAGATTCCAGCCTTTGGGCTGGGGGCCTCTCTCCTGGGTCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 72 bp GGCATCCCCACTGTGCCCACTAACACCCACACTGTCTaGGCGCTGGTAAAGGTAGCCACGAGCCGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: GIPTVPTNTHTV*ALVKVATSRWQ
Trigger: CTGCCAGCGGCTCGTGGCTACCTTTACCAGCGCCCAGACAGTGTGGGTGTTAGTGGGCACAGTGGGGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 72 bp GGCAGACCAGATCACAGGGTAGCTCTTGGGGCAGAATaGGAGGGTGCCTGGCTTGCTGGCGATACTGGGCGG +
Preference number: 3 (lower is better)
Translates to: GRPDHRVALGAE*EGAWLAGDTGR
Trigger: CCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGATCTGGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 72 bp GAAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTaGCCTCAGGGTAGTCAGGTCCTGAGCTTTGGACTC +
Preference number: 3 (lower is better)
Translates to: ESSPSPWEEASA*PQGSQVLSFGL
Trigger: GAGTCCAAAGCTCAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR CCA 72 bp ACGAGCCGCTGGCAGACCAGATCACAGGGTAGCTCTTaGGGCAGAATGAGAGGGTGCCTGGCTTGCTGGCGA +
Preference number: 3 (lower is better)
Translates to: TSRWQTRSQGSS*GRMRGCLACWR
Trigger: TCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGATCTGGTCTGCCAGCGGCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 72 bp GAGAAGTGCAGCTCTGGCAGAGTCAACAGACATCCCTaGCCCAGGAGAGAGGCCCCCAGCCCAAAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: EKCSSGRVNRHP*PRREAPSPKAG
Trigger: TCCAGCCTTTGGGCTGGGGGCCTCTCTCCTGGGTCAGGGATGTCTGTTGACTCTGCCAGAGCTGCACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 72 bp CAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTaGTCCCAATGCAACAAGATCCCTGATCGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: QSISPGDQESRP*SQCNKIPDRQP
Trigger: AGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR GCA 72 bp GGTAGCTCTTGGGGCAGAATGAGAGGGTGCCTGGCTTaGTGGCGATACTGGGCGGCTAGTTCAACCAGGTGC +
Preference number: 3 (lower is better)
Translates to: GSSWGRMRGCLA*WRYWAASSTRC
Trigger: GCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 72 bp AGTCCAAGCAACCCCTTGATCTCCACCACCAAGTGGTaGAGGGTCAGACACTCCTGCAGCAGCCGCAGGACG +
Preference number: 3 (lower is better)
Translates to: SPSNPLISTTKW*RVRHSCSSRRT
Trigger: CGTCCTGCGGCTGCTGCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 72 bp AGCTCTTGGGGCAGAATGAGAGGGTGCCTGGCTTGCTaGCGATACTGGGCGGCTAGTTCAACCAGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: SSWGRMRGCLAC*RYWAASSTRCR
Trigger: CCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 72 bp ACTGTCTGGGCGCTGGTAAAGGTAGCCACGAGCCGCTaGCAGACCAGATCACAGGGTAGCTCTTGGGGCAGA +
Preference number: 3 (lower is better)
Translates to: TVWALVKVATSR*QTRSQGSSWGR
Trigger: TCTGCCCCAAGAGCTACCCTGTGATCTGGTCTGCCAGCGGCTCGTGGCTACCTTTACCAGCGCCCAGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 72 bp TGCAGTCCAAGCAACCCCTTGATCTCCACCACCAAGTaGTGCAGGGTCAGACACTCCTGCAGCAGCCGCAGG +
Preference number: 3 (lower is better)
Translates to: CSPSNPLISTTK*CRVRHSCSSRR
Trigger: CCTGCGGCTGCTGCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CAA 90 bp CCTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCAGTCCAAGCAACCCCTaGATCTCCACCACCAAGTGG +
Preference number: 3 (lower is better)
Translates to: PSPVPLHARRAWKDQNAGSPSNP*ISTTKW
Trigger: CCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACT...GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR TCA 72 bp GATCTCGGCCCAGGTGCTGCAGTCCAAGCAACCCCTTaGTCTCCACCACCAAGTGGTGCAGGGTCAGACACT +
Preference number: 3 (lower is better)
Translates to: DLGPGAAVQATP*SPPPSGAGSDT
Trigger: AGTGTCTGACCCTGCACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACTGCAGCACCTGGGCCGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 72 bp GCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATaGAGGCCTTTCCCAAGGACGGCACAGAACGTGATG +
Preference number: 3 (lower is better)
Translates to: APPCSKGLEGSE*RPFPRTAQNVM
Trigger: CATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR CCA 72 bp GGGCAGGGAGGGTCTGTGTGGAGAGAAGTGCAGCTCTaGCAGAGTCAACAGACATCCCTGACCCAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: GQGGSVWREVQL*QSQQTSLTQER
Trigger: TCTCTCCTGGGTCAGGGATGTCTGTTGACTCTGCCAGAGCTGCACTTCTCTCCACACAGACCCTCCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 72 bp GGCAGAATGAGAGGGTGCCTGGCTTGCTGGCGATACTaGGCGGCTAGTTCAACCAGGTGCAGGATGTCATGG +
Preference number: 3 (lower is better)
Translates to: GRMRGCLACWRY*AASSTRCRMSW
Trigger: CCATGACATCCTGCACCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CAA 90 bp ATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTTCTCACCCCGAACTTTaGGGGGTTCATCCTGGATCC +
Preference number: 3 (lower is better)
Translates to: ISPGDQESRPCSQCNKIPSHPEL*GVHPGS
Trigger: GGATCCAGGATGAACCCCCAAAAGTTCGGGGTGAGA...AGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR-3UTR CAA 90 bp CACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGGGGACTGATCGCCAGCCTCTaGCCTCCCTCAGAGGGAGAC +
Preference number: 3 (lower is better)
Translates to: HCPLCNLEECSSKHLSWGLIASL*PPSEGD
Trigger: GTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAG...TCCCCAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAAGGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR CAA 90 bp CTCCTCGCTTGGTTAAAGGCACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCCTGATCGCCAGCCTCTaGCCTCCCTCAGAGGGAGAC +
Preference number: 3 (lower is better)
Translates to: LLAWLKALSLVQSRGMLLLIASL*PPSEGD
Trigger: GTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAG...GAGGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR-3UTR CAA 90 bp TGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCACAGCTTTGGACTCCTCGCTaGGTTAAAGGCACTGTCCCT +
Preference number: 3 (lower is better)
Translates to: CSKGLEGSECRPFPRTAQLWTPR*VKGTVP
Trigger: AGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAG...CTGTGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR TCA 72 bp ACGGTCACCAGCACATTCAAACAGATGCCATCACTGTaGTCTCGGCCCAGGTGCTGCAGTCCAAGCAACCCC +
Preference number: 3 (lower is better)
Translates to: TVTSTFKQMPSL*SRPRCCSPSNP
Trigger: GGGGTTGCTTGGACTGCAGCACCTGGGCCGAGATCACAGTGATGGCATCTGTTTGAATGTGCTGGTGACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR GCA 72 bp TCCGAAAAGCCACGGTCACCAGCACATTCAAACAGATaGCATCACTGTGATCTCGGCCCAGGTGCTGCAGTC +
Preference number: 3 (lower is better)
Translates to: SEKPRSPAHSNR*HHCDLGPGAAV
Trigger: GACTGCAGCACCTGGGCCGAGATCACAGTGATGGCATCTGTTTGAATGTGCTGGTGACCGTGGCTTTTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CCA 72 bp CAGGGTAGTCAGGTCCTGAGCTTTGGACTCCTCGCTTaGTTAAAGGCACTGTCCCTTGTGCAATCTAGAGGA +
Preference number: 3 (lower is better)
Translates to: QGSQVLSFGLLA*LKALSLVQSRG
Trigger: TCCTCTAGATTGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCCGCGGGCTAGAGTaGGCTGCGGAGCCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPSPWEEASACPQGSQVLSRGLE*AAEPAP
Trigger: GGGAGCGGGCTCCGCAGCGCACTCTAGCCCGCGGCT...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCGGGCTCGCAGCGGAGTaGGCAGGGAGGTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSPWEEASACPQGSQVLSGLAAE*AGRSVG
Trigger: ACCCACGGACCTCCCTGCCCACTCCGCTGCGAGCCC...GCTCAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAGCCGCGGGCTAGAGTaGGCTGCGGAGCCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: PQSISPGDQESRPCSQCNSRGLE*AAEPAP
Trigger: GGGAGCGGGCTCCGCAGCGCACTCTAGCCCGCGGCT...GTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCCGGGCTAGAGTGCGCTaGGGAGCCCGCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPRARVR*GARSQS
Trigger: GGACTGGGAGCGGGCTCCGCAGCGCACTCTAGCCCG...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCAGGGTCAGACACTCCTaGAGCAGCCGCAGGACGGCC +
Preference number: 4 (lower is better)
Translates to: PSPWEEASACPQGSQVLSRVRHS*SSRRTA
Trigger: GGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACCCT...GCTCAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp CCTCCCTCAGAGGGAGACAAGTCCGCACTGGAGGGAGCACGGCTGCCTAGCTCCCCTCATCCTGCTCGCTaGGGAACACGGCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PPSEGDKSALEGARLPSSPHPAR*GTRPAP
Trigger: TGGTGCTGGCCGTGTTCCTCAGCGAGCAGGATGAGG...GGAGCTAGGCAGCCGTGCTCCCTCCAGTGCGGACTTGTCTCCCTCTGAGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp GGAGACAAGTCCGCACTGGAGGGAGCACGGCTGCCTAGCTCCCTGTCACCTCCCGTCAACAGACATCCCTaGCCCAGGAGAGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GDKSALEGARLPSSLSPPVNRHP*PRREAP
Trigger: GGGGGCCTCTCTCCTGGGTCAGGGATGTCTGTTGAC...GGGAGGTGACAGGGAGCTAGGCAGCCGTGCTCCCTCCAGTGCGGACTTGTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCGCCGAGTCGCAGCTGTaGACGCTGGACCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPAESQL*TLDPWP
Trigger: TGGCCAGGGGTCCAGCGTGCACAGCTGCGACTCGGC...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACGGGTACCAGGCAGCCTaGAGGGACTCCGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: PQSISPGDQESRPCSQCNGYQAA*RDSASA
Trigger: GGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTACCC...GTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCTCCCTCAGAGGGAGACAAGTCCGCACTGGAGGGAGCACGGCTGCCTAGCTCCAGAGGGTGCCTGGCTTaGTGGCGATACTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PPSEGDKSALEGARLPSSRGCLA*WRYWAA
Trigger: AGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCT...GGAGCTAGGCAGCCGTGCTCCCTCCAGTGCGGACTTGTCTCCCTCTGAGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCTCCCTCAGAGGGAGACAAGTCCGCACTGGAGGGAGCACGGCTGCCTAGCTCCCCCAGTGCCCCTCCATaGTCGAAGGGCCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PPSEGDKSALEGARLPSSPSAPP*SKGLEG
Trigger: TCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGG...GGAGCTAGGCAGCCGTGCTCCCTCCAGTGCGGACTTGTCTCCCTCTGAGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CAGAGGGAGACAAGTCCGCACTGGAGGGAGCACGGCTGCCTAGCTCCCTGTCACGGGGACCTTCCCCAGTaGCCCTCCATGCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: QRETSPHWREHGCLAPCHGDLPQ*PSMLEG
Trigger: CCCTTCGAGCATGGAGGGGCACTGGGGAAGGTCCCC...GTGACAGGGAGCTAGGCAGCCGTGCTCCCTCCAGTGCGGACTTGTCTCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TGCAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGCCACTGGGGGGGGCTCGCAGCGGAGTaGGCAGGGAGGTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: CRPFPRTAQNVMRRCHWGGLAAE*AGRSVG
Trigger: ACCCACGGACCTCCCTGCCCACTCCGCTGCGAGCCC...CCCCCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCA
66% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CAGCCGCAGGACGGCCATCTTCATGCCACCCCTCTGCTCCATAGGGTCGAGGCCAGGTGCAGGATGTCATaGGCTCGCAGCGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QPQDGHLHATPLLHRVEARCRMS*ARSGVG
Trigger: GCCCACTCCGCTGCGAGCCCATGACATCCTGCACCT...GGCCTCGACCCTATGGAGCAGAGGGGTGGCATGAAGATGGCCGTCCTGCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGGGGTGCCTGGCTTGCTaGCGATACTGGGCGGCTAGT +
Preference number: 4 (lower is better)
Translates to: SPSPWEEASACPQGSQVLGCLAC*RYWAAS
Trigger: ACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCC...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp GAAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGAGCTCCCCATCCCCCTaGGAAGAGGCGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: ESSPSPWEEASACPQGSQSSPSP*EEASAC
Trigger: GCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCT...CTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCGTCTCGGGCTCACAGTaGAGCCCCGCCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPVSGSQ*SPASSF
Trigger: GAAGGAGGAGGCGGGGCTGCACTGTGAGCCCGAGAC...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp GCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTCCACCACCAAGTGGTaGAGGGTCAGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: APHPPGKRRQRALRVVRSSTTKW*RVRHSC
Trigger: GCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGA...GGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGATGCCACTGGGGGTaGAGAAAGCTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: SPSPWEEASACPQGSQVLRCHWG*RKLPIP
Trigger: GGGGATGGGGAGCTTTCTGCACCCCCAGTGGCATCT...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGCCCGGCACTCCCTCTTaGCCTCCTGGATCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPSPWEEASACPQGSQVLPGTPS*PPGSVA
Trigger: TGCTACTGATCCAGGAGGCCAAGAGGGAGTGCCGGG...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp GAAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGCACGATGGTCTCCCCTaGCTCCATTCTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESSPSPWEEASACPQGSQHDGLP*LHSPRR
Trigger: CCTGCGGGGAGAATGGAGCCAGGGGAGACCATCGTG...CTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CCTCCCTCAGAGGGAGACAAGTCCGCACTGGAGGGAGCACGGCTGCCTAGCTCCGTAGCCACGAGCCGCTaGCAGACCAGATCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PPSEGDKSALEGARLPSSVATSR*QTRSQG
Trigger: ACCCTGTGATCTGGTCTGCCAGCGGCTCGTGGCTAC...GGAGCTAGGCAGCCGTGCTCCCTCCAGTGCGGACTTGTCTCCCTCTGAGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp TGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCACAGTCCTCGCAGACCGACTaGGCCGAGCCGCGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: CSKGLEGSECRPFPRTAQSSQTD*AEPRAR
Trigger: TCTAGCCCGCGGCTCGGCTCAGTCGGTCTGCGAGGA...CTGTGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp GAATGCAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGCCACTGGCGGGCTAGAGTGCGCTaGGGAGCCCGCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ECRPFPRTAQNVMRRCHWRARVR*GARSQS
Trigger: GGACTGGGAGCGGGCTCCGCAGCGCACTCTAGCCCG...CCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGCAGGAGAGCCGCCCCTaGTCCCAATGCAACAAGATC +
Preference number: 4 (lower is better)
Translates to: SPSPWEEASACPQGSQVLQESRP*SQCNKI
Trigger: GATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTG...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTGCCGGGGACCTTCCCCAGTaGCCCTCCATGCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: NTSLLSNVLLPRGTFPSAGDLPQ*PSMLEG
Trigger: CCCTTCGAGCATGGAGGGGCACTGGGGAAGGTCCCC...GGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CAGCCGCAGGACGGCCATCTTCATGCCACCCCTCTGCTCCATAGGGTCGAGGCCCCAAAGGCTGGAATCTaGCCATGCCAGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QPQDGHLHATPLLHRVEAPKAGI*PCQAVP
Trigger: TGGCACAGCCTGGCATGGGCAGATTCCAGCCTTTGG...GGCCTCGACCCTATGGAGCAGAGGGGTGGCATGAAGATGGCCGTCCTGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp TGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCACAGTGCACGCTGGACCCCTaGCCAGCCAGCACGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CSKGLEGSECRPFPRTAQCTLDP*PASTEA
Trigger: GGCTTCCGTGCTGGCTGGCCAGGGGTCCAGCGTGCA...CTGTGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp GCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCTTTGGACTCCTCGCTTGGGCAGCGCCTCCACGATaGTCTCCCCTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: ASACPQGSQVLSFGLLAWAAPPR*SPLAPF
Trigger: GAATGGAGCCAGGGGAGACCATCGTGGAGGCGCTGC...CCAAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCTGAGGGCACGCTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCAGGTGCAGGATGTCATaGGCTCGCAGCGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPQCPSMLEGPGRIRMQARCRMS*ARSGVG
Trigger: GCCCACTCCGCTGCGAGCCCATGACATCCTGCACCT...GGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp GCTCCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAGCCGCTGGAGGAGCTaGCTTTGCAGGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: APQSISPGDQESRPCSQCSRWRS*LCRSSS
Trigger: GGAGGAAGACCTGCAAAGCCAGCTCCTCCAGCGGCT...GCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp CCCCACCTCTCTATCTGTTCACTGGGACAACAGAGGATCCCTGAAGCCGCTGGATCCTCGCAGACCGACTaGGCCGAGCCGCGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PHLSICSLGQQRIPEAAGSSQTD*AEPRAR
Trigger: TCTAGCCCGCGGCTCGGCTCAGTCGGTCTGCGAGGA...TCCAGCGGCTTCAGGGATCCTCTGTTGTCCCAGTGAACAGATAGAGAGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR TCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCGCTCTTGGGGCAGAATaGGAGGGTGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPALGAE*EGAWLA
Trigger: AGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGC...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGGTCTCGGGCTCACAGTaGAGCCCCGCCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LHARRAWKDQNAGLSQGRVSGSQ*SPASSF
Trigger: GAAGGAGGAGGCGGGGCTGCACTGTGAGCCCGAGAC...CCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AGTAACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTGGGTACCAGGCAGCCTaGAGGGACTCCGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: SNTSLLSNVLLPRGTFPSGYQAA*RDSASA
Trigger: GGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTACCC...ACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp GCTCCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCGAGGCATCCCCACTGTaGCCACTAACACCCACACTG +
Preference number: 4 (lower is better)
Translates to: APQSISPGDQESRPCSQCEASPL*PLTPTL
Trigger: CAGTGTGGGTGTTAGTGGGCACAGTGGGGATGCCTC...GCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGGTCAGACACTCCTaGAGCAGCCGCAGGACGGCC +
Preference number: 4 (lower is better)
Translates to: SAPPCSKGLEGSECRPFPRVRHS*SSRRTA
Trigger: GGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACCCT...TGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp TGCAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGCCACTGGGGGTGGAGGGAGCACGGCTaGCTAGCTCCCTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: CRPFPRTAQNVMRRCHWGWREHG*LAPCHL
Trigger: GAGGTGACAGGGAGCTAGGCAGCCGTGCTCCCTCCA...CCCCCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCTGGAGGGAGCACGGCTaGCTAGCTCCCTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: QCPSMLEGPGRIRMQAFPWREHG*LAPCHL
Trigger: GAGGTGACAGGGAGCTAGGCAGCCGTGCTCCCTCCA...GGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CCCCACCTCTCTATCTGTTCACTGGGACAACAGAGGATCCCTGAAGCCGCTGGATGCACGCTGGACCCCTaGCCAGCCAGCACGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PHLSICSLGQQRIPEAAGCTLDP*PASTEA
Trigger: GGCTTCCGTGCTGGCTGGCCAGGGGTCCAGCGTGCA...TCCAGCGGCTTCAGGGATCCTCTGTTGTCCCAGTGAACAGATAGAGAGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp CCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCACGATGGTCTCCCCTaGCTCCATTCTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PQCPSMLEGPGRIRMQAFHDGLP*LHSPRR
Trigger: CCTGCGGGGAGAATGGAGCCAGGGGAGACCATCGTG...AAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGTTCATCCTGGATCCCTaGGCTCCGAAAAGCCACGGT +
Preference number: 4 (lower is better)
Translates to: SPSPWEEASACPQGSQVLFILDP*APKSHG
Trigger: ACCGTGGCTTTTCGGAGCCCAGGGATCCAGGATGAA...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGCATGCTCGAAGGGCCTaGAAGGATCAGAATGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSPWEEASACPQGSQVLHARRA*KDQNAG
Trigger: GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATG...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCCCCAGCCCAAAGGCTaGAATCTGCCCATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPGDQESRPCSQCNKIPDPQPKG*NLPMPG
Trigger: GCCTGGCATGGGCAGATTCCAGCCTTTGGGCTGGGG...ATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CAA 72 bp GCCTGCAGGGACTCCGCATCGGCCTCCTTGGAAGTCTaGAGAATTCCACCTGGGGGAGATGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ACRDSASASLEV*RIPPGGDVGDG
Trigger: CCCATCCCCCACATCTCCCCCAGGTGGAATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR TCA 90 bp CCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGCCTCATCCTGCTCGCTaGGGAACACGGCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PPCSKGLEGSECRPFPRTPHPAR*GTRPAP
Trigger: TGGTGCTGGCCGTGTTCCTCAGCGAGCAGGATGAGG...CGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AGTGGTGCAGGGTCAGACACTCCTGCAGCAGCCGCAGGACGGCCATCTTCATGCGGCAGAATGAGAGGGTaGCTGGCTTGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: SGAGSDTPAAAAGRPSSCGRMRG*LACWRY
Trigger: GTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCC...GCATGAAGATGGCCGTCCTGCGGCTGCTGCAGGAGTGTCTGACCCTGCACCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp ATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTTCTCGGCCCAGGTGCTaGAGTCCAAGCAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: ISPGDQESRPCSQCNKIPSRPRC*SPSNPL
Trigger: CAAGGGGTTGCTTGGACTGCAGCACCTGGGCCGAGA...AGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp GCCCAGGTGCTGCAGTCCAAGCAACCCCTTGATCTCCACCACCAAGTGGTGCAGTCTCGGCCCAGGTGCTaGAGTCCAAGCAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: AQVLQSKQPLDLHHQVVQSRPRC*SPSNPL
Trigger: CAAGGGGTTGCTTGGACTGCAGCACCTGGGCCGAGA...CTGCACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACTGCAGCACCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCCGCCCCTGCTCCCAATaGAACAAGATCCCTGATCGC +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPRPCSQ*NKIPDR
Trigger: GCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCG...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCGCCAGCCTCTTGCCTAGATGCCACTGGGGGTaGAGAAAGCTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: RAAPAPNATRSLIASLLPRCHWG*RKLPIP
Trigger: GGGGATGGGGAGCTTTCTGCACCCCCAGTGGCATCT...AGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp GTACCAGGCAGCCTGCAGGGACTCCGCATCGGCCTCCTTGGAAGTCTTGAGAATCCCAGTGCCCCTCCATaGTCGAAGGGCCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VPGSLQGLRIGLLGSLENPSAPP*SKGLEG
Trigger: TCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGG...ATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCCTTTACTCAGCAACGTaGTCCTCCCTCGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPLYSAT*SSLGGP
Trigger: AGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAG...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp GAAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGTCCCTCTTGGCCTCCTaGATCAGTAGCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: ESSPSPWEEASACPQGSQSLLAS*ISSTSS
Trigger: GGATGAGGTGCTACTGATCCAGGAGGCCAAGAGGGA...CTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCGCTTGCTGGCGATACTaGGCGGCTAGTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: LPQCPSMLEGPGRIRMQAACWRY*AASSTR
Trigger: CCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGC...GGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCACAGGGGTGCCTGGCTTGCTaGCGATACTGGGCGGCTAGT +
Preference number: 4 (lower is better)
Translates to: CSKGLEGSECRPFPRTAQGCLAC*RYWAAS
Trigger: ACTAGCCGCCCAGTATCGCCAGCAAGCCAGGCACCC...CTGTGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CACTGTCTGGGCGCTGGTAAAGGTAGCCACGAGCCGCTGGCAGACCAGATCACAGTAGCCACGAGCCGCTaGCAGACCAGATCACAGGGT +
Preference number: 4 (lower is better)
Translates to: HCLGAGKGSHEPLADQITVATSR*QTRSQG
Trigger: ACCCTGTGATCTGGTCTGCCAGCGGCTCGTGGCTAC...TGTGATCTGGTCTGCCAGCGGCTCGTGGCTACCTTTACCAGCGCCCAGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp GCTCCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCTTCATCCTGGATCCCTaGGCTCCGAAAAGCCACGGT +
Preference number: 4 (lower is better)
Translates to: APQSISPGDQESRPCSQCFILDP*APKSHG
Trigger: ACCGTGGCTTTTCGGAGCCCAGGGATCCAGGATGAA...GCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TGCAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGCCACTGGGGGTCAAAGCATCTCTCCTaGGGACCAGGAGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: CRPFPRTAQNVMRRCHWGSKHLS*GPGEPP
Trigger: GGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGA...CCCCCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGGTGGGCCATACCTGTaGGGCGAGCGAGGAACACGA +
Preference number: 4 (lower is better)
Translates to: PPCSKGLEGSECRPFPRTGGPYL*GERGTR
Trigger: TCGTGTTCCTCGCTCGCCCCACAGGTATGGCCCACC...CGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp GGATCCCTGAAGCCGCTGGAGGAGCTGGCTTTGCAGGTCTTCCTCCATCACCTTCACACTGCCTCCAGGTaGGCCATACCTGTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: GSLKPLEELALQVFLHHLHTASR*AIPVGR
Trigger: TCGCCCCACAGGTATGGCCCACCTGGAGGCAGTGTG...AAGGTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCAGCGGCTTCAGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp GGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCGCCAGCGGGAAAGGTGTCAACTaGCCCTGTTCACACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTRRAAPAPNATRSLIASGKGVN*PCSHCL
Trigger: GAGGCAGTGTGAACAGGGCCAGTTGACACCTTTCCC...GCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR TCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCCCTCCTTGGAAGTCTTaGGAATTCCACCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPPPWKS*EFHLWG
Trigger: GCCCCACAGGTGGAATTCTCAAGACTTCCAAGGAGG...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611621.2
CDS-3UTR TCA 90 bp CCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACGTCCAAGCAACCCCTTaGTCTCCACCACCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PQSISPGDQESRPCSQCNVQATP*SPPPSG
Trigger: ACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGAC...GTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp CTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCAGATGCCATCACTGTaGTCTCGGCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LHARRAWKDQNAGLSQGRQMPSL*SRPRCC
Trigger: GCAGCACCTGGGCCGAGATCACAGTGATGGCATCTG...CCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp CCTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCAGGGTAGTCAGGTCCTaGGCTTTGGACTCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: PSPVPLHARRAWKDQNAGRVVRS*ALDSSL
Trigger: AAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCT...GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCGCTAGTTCAACCAGGTaGAGGATGTCATGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSPVPLHARRAWKDQNAGASSTR*RMSWAR
Trigger: GCGAGCCCATGACATCCTGCACCTGGTTGAACTAGC...GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCGAGGCATCCCCACTGTaGCCACTAACACCCACACTG +
Preference number: 4 (lower is better)
Translates to: QCPSMLEGPGRIRMQAFPEASPL*PLTPTL
Trigger: CAGTGTGGGTGTTAGTGGGCACAGTGGGGATGCCTC...GGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp TCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATTCCACCACCAAGTGGTaGAGGGTCAGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPGDQESRPCSQCNKIPDSTTKW*RVRHSC
Trigger: GCAGGAGTGTCTGACCCTGCACCACTTGGTGGTGGA...ATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp ATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTCAGGAGAGCCGCCCCTaGTCCCAATGCAACAAGATC +
Preference number: 4 (lower is better)
Translates to: ISPGDQESRPCSQCNKIPQESRP*SQCNKI
Trigger: GATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTG...AGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp TGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGAAGAGGCGTCAGCGTaGCCTCAGGGTAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: CPSMLEGPGRIRMQAFPKEEASA*PQGSQV
Trigger: GACCTGACTACCCTGAGGGCACGCTGACGCCTCTTC...CTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp GGATCCCTGAAGCCGCTGGAGGAGCTGGCTTTGCAGGTCTTCCTCCATCACCTTGAAGAGGCGTCAGCGTaGCCTCAGGGTAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSLKPLEELALQVFLHHLEEASA*PQGSQV
Trigger: GACCTGACTACCCTGAGGGCACGCTGACGCCTCTTC...AAGGTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCAGCGGCTTCAGGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp AACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTGCCCTTTACTCAGCAACGTaGTCCTCCCTCGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: NTSLLSNVLLPRGTFPSALYSAT*SSLGGP
Trigger: AGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAG...GGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp ATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGCTGGAATCTGCCCATaGCAGGCTGTGCCAGCCATA +
Preference number: 4 (lower is better)
Translates to: ISPGDQESRPCSQCNKIPAGICP*QAVPAI
Trigger: TATGGCTGGCACAGCCTGGCATGGGCAGATTCCAGC...AGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp GAAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGCTGTGTGGAGAGAAGTaGAGCTCTGGCAGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: ESSPSPWEEASACPQGSQLCGEK*SSGRVN
Trigger: GTTGACTCTGCCAGAGCTGCACTTCTCTCCACACAG...CTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp CTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTCCCTCTTGGCCTCCTaGATCAGTAGCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: LPQCPSMLEGPGRIRMQASLLAS*ISSTSS
Trigger: GGATGAGGTGCTACTGATCCAGGAGGCCAAGAGGGA...GGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp ATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGCTTGCTGGCGATACTaGGCGGCTAGTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: ISPGDQESRPCSQCNKIPACWRY*AASSTR
Trigger: CCTGGTTGAACTAGCCGCCCAGTATCGCCAGCAAGC...AGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGAGCCGCTGGAGGAGCTaGCTTTGCAGGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPCSKGLEGSECRPFPRTSRWRS*LCRSSS
Trigger: GGAGGAAGACCTGCAAAGCCAGCTCCTCCAGCGGCT...CGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCATCAAAGCATCTCTCCTaGGGACCAGGAGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PCSKGLEGSECRPFPRTASKHLS*GPGEPP
Trigger: GGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGA...TGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AATGCAACAAGATCCCTGATCGCCAGCCTCTTGCCTCCCTCAGAGGGAGACAAGAGCTCCCCATCCCCCTaGGAAGAGGCGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NATRSLIASLLPPSEGDKSSPSP*EEASAC
Trigger: GCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCT...CTTGTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AACAGGACTGGCTGTAGAGGGGCTCACCTCACCGAGGAGCTGGGGGAAAGGTGTATGAGGAGATGCCACTaGGGGTGCAGAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NRTGCRGAHLTEELGERCMRRCH*GCRKLP
Trigger: GGGGAGCTTTCTGCACCCCCAGTGGCATCTCCTCAT...ACACCTTTCCCCCAGCTCCTCGGTGAGGTGAGCCCCTCTACAGCCAGTCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613958.1
3UTR CAA 72 bp GCTCCCAATGCAACAAGATCCCTGATCGCCAGCCTCTaGCCTCCCTCAGAGGGAGACAAGTCCGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: APNATRSLIASL*PPSEGDKSALE
Trigger: CTCCAGTGCGGACTTGTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
3UTR CAA 72 bp TACCAGGCAGCCTGCAGGGACTCCGCATCGGCCTCCTaGGAAGTCTTGAGAATTCCACCTGGGGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: YQAACRDSASAS*EVLRIPPGGDV
Trigger: CACATCTCCCCCAGGTGGAATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR TCA 90 bp AGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCGCCAGCCTCTTGCCTGTCCAAGCAACCCCTTaGTCTCCACCACCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RAAPAPNATRSLIASLLPVQATP*SPPPSG
Trigger: ACCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGAC...AGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp GAATGCAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGCCACTGGCAGATGCCATCACTGTaGTCTCGGCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ECRPFPRTAQNVMRRCHWQMPSL*SRPRCC
Trigger: GCAGCACCTGGGCCGAGATCACAGTGATGGCATCTG...CCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp CAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCATGCAACAAGATCCCTaGTCGCCAGCCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: QCPSMLEGPGRIRMQAFPMQQDP*SPASCL
Trigger: GAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCAT...GGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp AACAGGACTGGCTGTAGAGGGGCTCACCTCACCGAGGAGCTGGGGGAAAGGTGTATGCAACAAGATCCCTaGTCGCCAGCCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: NRTGCRGAHLTEELGERCMQQDP*SPASCL
Trigger: GAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCAT...ACACCTTTCCCCCAGCTCCTCGGTGAGGTGAGCCCCTCTACAGCCAGTCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp ATGCCAGGCTGTGCCAGCCATAACAGGACTGGCTGTAGAGGGGCTCACCTCACCGCTAGTTCAACCAGGTaGAGGATGTCATGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: MPGCASHNRTGCRGAHLTASSTR*RMSWAR
Trigger: GCGAGCCCATGACATCCTGCACCTGGTTGAACTAGC...GGTGAGGTGAGCCCCTCTACAGCCAGTCCTGTTATGGCTGGCACAGCCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp TGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCACAGGGCAGAATGAGAGGGTaGCTGGCTTGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: CSKGLEGSECRPFPRTAQGRMRG*LACWRY
Trigger: GTATCGCCAGCAAGCCAGGCACCCTCTCATTCTGCC...CTGTGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTGCCTGGAGGAGCTGGCTTTaGAGGTCTTCCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: NTSLLSNVLLPRGTFPSAWRSWL*RSSSIT
Trigger: GGTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCA...GGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CAGCACATTCAAACAGATGCCATCACTGTGATCTCGGCCCAGGTGCTGCAGTCCGCAGCGCCTCCACGATaGTCTCCCCTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: QHIQTDAITVISAQVLQSAAPPR*SPLAPF
Trigger: GAATGGAGCCAGGGGAGACCATCGTGGAGGCGCTGC...GGACTGCAGCACCTGGGCCGAGATCACAGTGATGGCATCTGTTTGAATGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp TGCAGGCCTTTCCCAAGGACGGCACAGAACGTGATGAGGAGATGCCACTGGGGGTCACAGGGTAGCTCTTaGGGCAGAATGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: CRPFPRTAQNVMRRCHWGSQGSS*GRMRGC
Trigger: GCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGA...CCCCCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCTTGGGAAAGGCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CAGCCGCAGGACGGCCATCTTCATGCCACCCCTCTGCTCCATAGGGTCGAGGCCTCTCTATCTGTTCACTaGGACAACAGAGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: QPQDGHLHATPLLHRVEASLSVH*DNRGSL
Trigger: CAGGGATCCTCTGTTGTCCCAGTGAACAGATAGAGA...GGCCTCGACCCTATGGAGCAGAGGGGTGGCATGAAGATGGCCGTCCTGCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp CCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGATGAGGAGATGCCACTaGGGGTGCAGAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPCSKGLEGSECRPFPRTMRRCH*GCRKLP
Trigger: GGGGAGCTTTCTGCACCCCCAGTGGCATCTCCTCAT...CGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCACAGGGAGGGTCTGTGTaGAGAGAAGTGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SAPPCSKGLEGSECRPFPQGGSV*REVQLW
Trigger: CCAGAGCTGCACTTCTCTCCACACAGACCCTCCCTG...TGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp AAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGGCACATTCAAACAGATaGCATCACTGTGATCTCGGC +
Preference number: 4 (lower is better)
Translates to: KAPHPPGKRRQRALRVVRAHSNR*HHCDLG
Trigger: GCCGAGATCACAGTGATGGCATCTGTTTGAATGTGC...CCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCAGGCACTGTCCCTTGTaGAATCTAGAGGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: PSPVPLHARRAWKDQNAGRHCPL*NLEECS
Trigger: GGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCT...GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTGCCCTGGAAGGATCAGAATaGAGGCCTTTCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: NTSLLSNVLLPRGTFPSALEGSE*RPFPRT
Trigger: CGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAG...GGCACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCATCACAGGGTAGCTCTTaGGGCAGAATGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SAPPCSKGLEGSECRPFPSQGSS*GRMRGC
Trigger: GCACCCTCTCATTCTGCCCCAAGAGCTACCCTGTGA...TGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAACACCCACACTGTCTaGGCGCTGGTAAAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SAPPCSKGLEGSECRPFPNTHTV*ALVKVA
Trigger: GGCTACCTTTACCAGCGCCCAGACAGTGTGGGTGTT...TGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATTTTGGGGGTTCATCCTaGATCCCTGGGCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: SPGDQESRPCSQCNKIPDFGGSS*IPGLRK
Trigger: TTTTCGGAGCCCAGGGATCCAGGATGAACCCCCAAA...ATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CCTTCCCCAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCAGAGAAGTGCAGCTCTaGCAGAGTCAACAGACATCC +
Preference number: 4 (lower is better)
Translates to: PSPVPLHARRAWKDQNAGREVQL*QSQQTS
Trigger: GGATGTCTGTTGACTCTGCCAGAGCTGCACTTCTCT...GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR TCA 90 bp TCAGGTCCTGAGCTTTGGACTCCTCGCTTGGTTAAAGGCACTGTCCCTTGTGCAGCTCTTGGGGCAGAATaGGAGGGTGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SGPELWTPRLVKGTVPCAALGAE*EGAWLA
Trigger: AGCAAGCCAGGCACCCTCTCATTCTGCCCCAAGAGC...TGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AGTAACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTTGGAGGAGCTGGCTTTaGAGGTCTTCCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: SNTSLLSNVLLPRGTFPSWRSWL*RSSSIT
Trigger: GGTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCA...ACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp GGATCCCTGAAGCCGCTGGAGGAGCTGGCTTTGCAGGTCTTCCTCCATCACCTTAACGTGATGAGGAGATaGCACTGGGGGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GSLKPLEELALQVFLHHLNVMRR*HWGCRK
Trigger: CTTTCTGCACCCCCAGTGGCATCTCCTCATCACGTT...AAGGTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCAGCGGCTTCAGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp GTACCAGGCAGCCTGCAGGGACTCCGCATCGGCCTCCTTGGAAGTCTTGAGAATTTTGGGGGTTCATCCTaGATCCCTGGGCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: VPGSLQGLRIGLLGSLENFGGSS*IPGLRK
Trigger: TTTTCGGAGCCCAGGGATCCAGGATGAACCCCCAAA...ATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp CATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTCTCTATCTGTTCACTaGGACAACAGAGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: HLSWGPGEPPLLPMQQDPSLSVH*DNRGSL
Trigger: CAGGGATCCTCTGTTGTCCCAGTGAACAGATAGAGA...GGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AATGCAACAAGATCCCTGATCGCCAGCCTCTTGCCTCCCTCAGAGGGAGACAAGACCTCACCGAGGAGCTaGGGGAAAGGTGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: NATRSLIASLLPPSEGDKTSPRS*GKGVNW
Trigger: CCAGTTGACACCTTTCCCCCAGCTCCTCGGTGAGGT...CTTGTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp TCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCTTTGGACTCCTCGCTTGGTTACTTGAGAATTCCACCTaGGGGAGATGTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SACPQGSQVLSFGLLAWLLENST*GRCGGW
Trigger: CCATCCCCCACATCTCCCCCAGGTGGAATTCTCAAG...TAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCTGAGGGCACGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR GCA 90 bp CTGAGCTTTGGACTCCTCGCTTGGTTAAAGGCACTGTCCCTTGTGCAATCTAGAAGAGGGTGCCTGGCTTaGTGGCGATACTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LSFGLLAWLKALSLVQSRRGCLA*WRYWAA
Trigger: AGCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCT...TCTAGATTGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCGCCAGCCTCTTGCCTGCACATTCAAACAGATaGCATCACTGTGATCTCGGC +
Preference number: 4 (lower is better)
Translates to: RAAPAPNATRSLIASLLPAHSNR*HHCDLG
Trigger: GCCGAGATCACAGTGATGGCATCTGTTTGAATGTGC...AGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGAGGCACTGTCCCTTGTaGAATCTAGAGGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: LHARRAWKDQNAGLSQGRRHCPL*NLEECS
Trigger: GGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCT...CCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CCCCACCTCTCTATCTGTTCACTGGGACAACAGAGGATCCCTGAAGCCGCTGGACTGGAAGGATCAGAATaGAGGCCTTTCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: PHLSICSLGQQRIPEAAGLEGSE*RPFPRT
Trigger: CGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAG...TCCAGCGGCTTCAGGGATCCTCTGTTGTCCCAGTGAACAGATAGAGAGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CCA 90 bp TCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATTTTGGACTCCTCGCTTaGTTAAAGGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGDQESRPCSQCNKIPDFGLLA*LKALSL
Trigger: AAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAA...ATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp CTCCTCGCTTGGTTAAAGGCACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCCGCCCCTGCTCCCAATaGAACAAGATCCCTGATCGC +
Preference number: 4 (lower is better)
Translates to: LLAWLKALSLVQSRGMLLRPCSQ*NKIPDR
Trigger: GCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCG...GAGGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp CACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGGGGAAACACCCACACTGTCTaGGCGCTGGTAAAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: HCPLCNLEECSSKHLSWGNTHTV*ALVKVA
Trigger: GGCTACCTTTACCAGCGCCCAGACAGTGTGGGTGTT...TCCCCAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAAGGGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCTTTGGACTCCTCGCTTGGTTATTTGGACTCCTCGCTTaGTTAAAGGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SACPQGSQVLSFGLLAWLFGLLA*LKALSL
Trigger: AAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAA...TAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCTGAGGGCACGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR TCA 90 bp CTGAGCTTTGGACTCCTCGCTTGGTTAAAGGCACTGTCCCTTGTGCAATCTAGAAGGGTAGTCAGGTCCTaGGCTTTGGACTCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LSFGLLAWLKALSLVQSRRVVRS*ALDSSL
Trigger: AAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCT...TCTAGATTGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AAGGCACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGCATGCTCGAAGGGCCTaGAAGGATCAGAATGCAGGC +
Preference number: 4 (lower is better)
Translates to: KALSLVQSRGMLLKASLLHARRA*KDQNAG
Trigger: GCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATG...CAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR GCA 90 bp AAGGCACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGAACGTGATGAGGAGATaGCACTGGGGGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KALSLVQSRGMLLKASLLNVMRR*HWGCRK
Trigger: CTTTCTGCACCCCCAGTGGCATCTCCTCATCACGTT...CAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp TCAGGTCCTGAGCTTTGGACTCCTCGCTTGGTTAAAGGCACTGTCCCTTGTGCATCAGGTCCTGAGCTTTaGACTCCTCGCTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SGPELWTPRLVKGTVPCASGPEL*TPRLVK
Trigger: TTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGA...TGCACAAGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CCA 90 bp AAGGCACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGTCAGGTCCTGAGCTTTaGACTCCTCGCTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: KALSLVQSRGMLLKASLLSGPEL*TPRLVK
Trigger: TTTAACCAAGCGAGGAGTCCAAAGCTCAGGACCTGA...CAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAAGGGACAGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS GCA 90 bp GGGCCGGATCCTCGCAGACCGACTGAGCCGAGCCGCGGGCTAGAGTaGGCTGCGGAGCCCGCTCCCAGTCCCTGCGGCAGCGGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: GPDPRRPTEPSRGLE*AAEPAPSPCGSGPG
Trigger: TCCCGGCCCGCTGCCGCAGGGACTGGGAGCGGGCTCCGCAGCGCACTCTAGCCCGCGGCTCGGCTCAGTCGGTCTGCGAGGATCCGGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 90 bp TGTCAACTGGCCCTGTTCACACTGCCTCCAGGTGGGCCATACCTGTaGGGCGAGCGAGGAACACGAAGCGGACCCAGGAGGGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: CQLALFTLPPGGPYL*GERGTRSGPRRGPA
Trigger: AGCGGGGCCCCTCCTGGGTCCGCTTCGTGTTCCTCGCTCGCCCCACAGGTATGGCCCACCTGGAGGCAGTGTGAACAGGGCCAGTTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS CCA 90 bp GCTGGGGGAAAGGTGTCAACTGGCCCTGTTCACACTGCCTCCAGGTaGGCCATACCTGTGGGGCGAGCGAGGAACACGAAGCGGACCCAG +
Preference number: 5 (lower is better)
Translates to: AGGKVSTGPVHTASR*AIPVGRARNTKRTQ
Trigger: CTGGGTCCGCTTCGTGTTCCTCGCTCGCCCCACAGGTATGGCCCACCTGGAGGCAGTGTGAACAGGGCCAGTTGACACCTTTCCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CAA 90 bp AGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCGCCAGCCTCTTGCCTGAGAGGGTGCCTGGCTaGCTGGCGATACTGGGCGGC +
Preference number: 5 (lower is better)
Translates to: RAAPAPNATRSLIASLLPERVPG*LAILGG
Trigger: GCCGCCCAGTATCGCCAGCAAGCCAGGCACCCTCTC...AGGCAAGAGGCTGGCGATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp ATGCCAGGCTGTGCCAGCCATAACAGGACTGGCTGTAGAGGGGCTCACCTCACCCCCCGGCACTCCCTCTaGGCCTCCTGGATCAGTAGC +
Preference number: 5 (lower is better)
Translates to: MPGCASHNRTGCRGAHLTPRHSL*ASWISS
Trigger: GCTACTGATCCAGGAGGCCAAGAGGGAGTGCCGGGG...GGTGAGGTGAGCCCCTCTACAGCCAGTCCTGTTATGGCTGGCACAGCCTGGCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CAA 90 bp CCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGGCACCCCGGCACTCCCTCTaGGCCTCCTGGATCAGTAGC +
Preference number: 5 (lower is better)
Translates to: PCSKGLEGSECRPFPRTAPRHSL*ASWISS
Trigger: GCTACTGATCCAGGAGGCCAAGAGGGAGTGCCGGGG...TGCCGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp TCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACAAGATCCCTGATCTGATCGCCAGCCTCTaGCCTCCCTCAGAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: SPGDQESRPCSQCNKIPDLIASL*PPSEGD
Trigger: GTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAG...ATCAGGGATCTTGTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 90 bp GCCATAACAGGACTGGCTGTAGAGGGGCTCACCTCACCGAGGAGCTaGGGGAAAGGTGTCAACTGGCCCTGTTCACACTGCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: AITGLAVEGLTSPRS*GKGVNWPCSHCLQV
Trigger: CACCTGGAGGCAGTGTGAACAGGGCCAGTTGACACCTTTCCCCCAGCTCCTCGGTGAGGTGAGCCCCTCTACAGCCAGTCCTGTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS-3UTR CAA 90 bp TCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGTCCGCATCGGCCTCCTaGGAAGTCTTGAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: SPSPWEEASACPQGSQVLSASAS*EVLRIP
Trigger: TGGAATTCTCAAGACTTCCAAGGAGGCCGATGCGGA...CAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp AAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGAGTCCAAGCAACCCCTaGATCTCCACCACCAAGTGG +
Preference number: 5 (lower is better)
Translates to: KAPHPPGKRRQRALRVVRSPSNP*ISTTKW
Trigger: CCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACT...CCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp AAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCTCACCCCGAACTTTaGGGGGTTCATCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: KAPHPPGKRRQRALRVVRSHPEL*GVHPGS
Trigger: GGATCCAGGATGAACCCCCAAAAGTTCGGGGTGAGA...CCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp CCTCAAAGCATCTCTCCTGGGGACCAGGAGAGCCGCCCCTGCTCCCAATGCAACCTGGAGGAGCTGGCTTaGCAGGTCTTCCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: PQSISPGDQESRPCSQCNLEELA*QVFLHH
Trigger: GTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCAG...GTTGCATTGGGAGCAGGGGCGGCTCTCCTGGTCCCCAGGAGAGATGCTTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp CCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCAAGGACGCTGATCGCCAGCCTCTaGCCTCCCTCAGAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: PPCSKGLEGSECRPFPRTLIASL*PPSEGD
Trigger: GTCTCCCTCTGAGGGAGGCAAGAGGCTGGCGATCAG...CGTCCTTGGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp CCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCCTTTGGACTCCTCGCTaGGTTAAAGGCACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: PSPWEEASACPQGSQVLSLWTPR*VKGTVP
Trigger: AGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAG...GCTCAGGACCTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp GCGTCAGCGTGCCCTCAGGGTAGTCAGGTCCTGAGCTTTGGACTCCTCGCTTGGAGTCCAAGCAACCCCTaGATCTCCACCACCAAGTGG +
Preference number: 5 (lower is better)
Translates to: ASACPQGSQVLSFGLLAWSPSNP*ISTTKW
Trigger: CCACTTGGTGGTGGAGATCAAGGGGTTGCTTGGACT...CCAAGCGAGGAGTCCAAAGCTCAGGACCTGACTACCCTGAGGGCACGCTGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp GAAAGCTCCCCATCCCCCTGGGAAGAGGCGTCAGCGTGCCCTCAGGGTAGTCAGCTTTGGACTCCTCGCTaGGTTAAAGGCACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: ESSPSPWEEASACPQGSQLWTPR*VKGTVP
Trigger: AGGGACAGTGCCTTTAACCAAGCGAGGAGTCCAAAG...CTGACTACCCTGAGGGCACGCTGACGCCTCTTCCCAGGGGGATGGGGAGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp CAGTGCCCCTCCATGCTCGAAGGGCCTGGAAGGATCAGAATGCAGGCCTTTCCCTCTCACCCCGAACTTTaGGGGGTTCATCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: QCPSMLEGPGRIRMQAFPSHPEL*GVHPGS
Trigger: GGATCCAGGATGAACCCCCAAAAGTTCGGGGTGAGA...GGGAAAGGCCTGCATTCTGATCCTTCCAGGCCCTTCGAGCATGGAGGGGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp AGTAACACCTCTTTACTCAGCAACGTGCTCCTCCCTCGGGGGACCTTCCCCAGTTCCGCATCGGCCTCCTaGGAAGTCTTGAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: SNTSLLSNVLLPRGTFPSSASAS*EVLRIP
Trigger: TGGAATTCTCAAGACTTCCAAGGAGGCCGATGCGGA...ACTGGGGAAGGTCCCCCGAGGGAGGAGCACGTTGCTGAGTAAAGAGGTGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS-3UTR CAA 90 bp CACTGTCCCTTGTGCAATCTAGAGGAATGCTCCTCAAAGCATCTCTCCTGGGGACTGGAGGAGCTGGCTTaGCAGGTCTTCCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: HCPLCNLEECSSKHLSWGLEELA*QVFLHH
Trigger: GTGATGGAGGAAGACCTGCAAAGCCAGCTCCTCCAG...TCCCCAGGAGAGATGCTTTGAGGAGCATTCCTCTAGATTGCACAAGGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 72 bp GCCGGCGCCGAGTCGCAGCTGTGCACGCTGGACCCCTaGCCAGCCAGCACGGAAGCCAGCGCCCCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: AGAESQLCTLDP*PASTEASAPAR
Trigger: CCTGGCGGGGGCGCTGGCTTCCGTGCTGGCTGGCCAGGGGTCCAGCGTGCACAGCTGCGACTCGGCGCCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS GCA 72 bp CCTCGCAGACCGACTGAGCCGAGCCGCGGGCTAGAGTaGGCTGCGGAGCCCGCTCCCAGTCCCTGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: PRRPTEPSRGLE*AAEPAPSPCGS
Trigger: GCTGCCGCAGGGACTGGGAGCGGGCTCCGCAGCGCACTCTAGCCCGCGGCTCGGCTCAGTCGGTCTGCGAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 72 bp CACCTCCCGCTGCAGCGCCTCCACGATGGTCTCCCCTaGCTCCATTCTCCCCGCAGGCAGGTACCACGACCC +
Preference number: 6 (lower is better)
Translates to: HLPLQRLHDGLP*LHSPRRQVPRP
Trigger: GGGTCGTGGTACCTGCCTGCGGGGAGAATGGAGCCAGGGGAGACCATCGTGGAGGCGCTGCAGCGGGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 72 bp CCGCAGGCAGGTACCACGACCCCCGGCACTCCCTCTTaGCCTCCTGGATCAGTAGCACCTCATCCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: PQAGTTTPGTPS*PPGSVAPHPAR
Trigger: GCGAGCAGGATGAGGTGCTACTGATCCAGGAGGCCAAGAGGGAGTGCCGGGGGTCGTGGTACCTGCCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 72 bp GCCCTGTTCACACTGCCTCCAGGTGGGCCATACCTGTaGGGCGAGCGAGGAACACGAAGCGGACCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: ALFTLPPGGPYL*GERGTRSGPRR
Trigger: CCTCCTGGGTCCGCTTCGTGTTCCTCGCTCGCCCCACAGGTATGGCCCACCTGGAGGCAGTGTGAACAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS CAA 72 bp CCCGCAGGCAGGTACCACGACCCCCGGCACTCCCTCTaGGCCTCCTGGATCAGTAGCACCTCATCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: PAGRYHDPRHSL*ASWISSTSSCS
Trigger: CGAGCAGGATGAGGTGCTACTGATCCAGGAGGCCAAGAGGGAGTGCCGGGGGTCGTGGTACCTGCCTGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CAA 90 bp TCCATTCTCCCCGCAGGCAGGTACCACGACCCCCGGCACTCCCTCTaGGCCTCCTGGATCAGTAGCACCTCATCCTGCTCGCTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: SILPAGRYHDPRHSL*ASWISSTSSCSLRN
Trigger: GTTCCTCAGCGAGCAGGATGAGGTGCTACTGATCCAGGAGGCCAAGAGGGAGTGCCGGGGGTCGTGGTACCTGCCTGCGGGGAGAATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 72 bp AGGTACCACGACCCCCGGCACTCCCTCTTGGCCTCCTaGATCAGTAGCACCTCATCCTGCTCGCTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: RYHDPRHSLLAS*ISSTSSCSLRN
Trigger: GTTCCTCAGCGAGCAGGATGAGGTGCTACTGATCCAGGAGGCCAAGAGGGAGTGCCGGGGGTCGTGGTACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611621.2
ENST00000613958.1
CDS CCA 72 bp GGACTGGCTGTAGAGGGGCTCACCTCACCGAGGAGCTaGGGGAAAGGTGTCAACTGGCCCTGTTCACACTGC +
Preference number: 6 (lower is better)
Translates to: GLAVEGLTSPRS*GKGVNWPCSHC
Trigger: GCAGTGTGAACAGGGCCAGTTGACACCTTTCCCCCAGCTCCTCGGTGAGGTGAGCCCCTCTACAGCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613958.1
CDS CAA 72 bp TACCAGGCAGCCTGCAGGGACTCCGCATCGGCCTCCTaGGAAGTCTTGAGAATTCCACCTGTGGGGCGAGCG +
Preference number: 6 (lower is better)
Translates to: YQAACRDSASAS*EVLRIPPVGRA
Trigger: CGCTCGCCCCACAGGTGGAATTCTCAAGACTTCCAAGGAGGCCGATGCGGAGTCCCTGCAGGCTGCCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611621.2