RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT16 (Homo sapiens)

Ensembl gene IDs: ENSG00000198585

Ensembl transcript IDs: ENST00000502852.1, ENST00000521288.2, ENST00000537561.5

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAGAGGGAATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTaGGTACATACCCATGGTGAGGGCACAGGCAGCAGCTCCAATCTG +
Preference number: 1 (lower is better)
Translates to: KEGILCPRITWECLW*VHTHGEGTGSSSNL
Trigger: CAGATTGGAGCTGCTGCCTGTGCCCTCACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGATTCCCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 90 bp TGGAAAGAGGGAATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTaGTGGGTACATACCCATGGTGAGGGCACAGGCAGCAGCTCCAAT +
Preference number: 1 (lower is better)
Translates to: WKEGILCPRITWECL*WVHTHGEGTGSSSN
Trigger: ATTGGAGCTGCTGCCTGTGCCCTCACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGATTCCCTCTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 90 bp ACCATTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTaGAGGCTCACCCTGCCCTCCAGCCTCGCCAACCCTAGATTTCAC +
Preference number: 1 (lower is better)
Translates to: TILLNICRFLASAPM*RLTLPSSLANPRFH
Trigger: GTGAAATCTAGGGTTGGCGAGGCTGGAGGGCAGGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 90 bp TCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATaGGTCCATGGAGGGCTGCCTCTAGTGATGAGCTGGAATCTTAAG +
Preference number: 1 (lower is better)
Translates to: SFPPSLVPRSSSQFS*VHGGLPLVMSWNLK
Trigger: CTTAAGATTCCAGCTCATCACTAGAGGCAGCCCTCCATGGACCCATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR TCA 90 bp GGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGTAGATaGAGTGAAGGCAGGGTGGTGCTAGACTGGGGTGGGTCAATTCCC +
Preference number: 1 (lower is better)
Translates to: GLPPPVYVFIPPLCR*SEGRVVLDWGGSIP
Trigger: GGGAATTGACCCACCCCAGTCTAGCACCACCCTGCCTTCACTTCATCTACATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 90 bp GGAATCACAGCAACATTTCAGATAAGGAAAAGGAGGTCAAGGGCTTaGGTCAAAGTCACCACAGCAGTTAGTGGGGGTCAAAGATTGCAA +
Preference number: 1 (lower is better)
Translates to: GITATFQIRKRRSRA*VKVTTAVSGGQRLQ
Trigger: TTGCAATCTTTGACCCCCACTAACTGCTGTGGTGACTTTGACCCAAGCCCTTGACCTCCTTTTCCTTATCTGAAATGTTGCTGTGATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 90 bp TCTAGTGGCTACTGCCTCAAAGATGTATTCATACCCTTTCACCAGTaGTTGTCAAAATGTGGTCCTCAGATTATTTGCATCAGCATTATT +
Preference number: 1 (lower is better)
Translates to: SSGYCLKDVFIPFHQ*LSKCGPQIICISII
Trigger: AATAATGCTGATGCAAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTTTGAGGCAGTAGCCACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR CCA 90 bp CCTCAAAGATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTaGTCCTCAGATTATTTGCATCAGCATTATTTGGGAACTTTTGAA +
Preference number: 1 (lower is better)
Translates to: PQRCIHTLSPVVVKM*SSDYLHQHYLGTFE
Trigger: TTCAAAAGTTCCCAAATAATGCTGATGCAAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTTTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGGCTGGGCTAGACCCTaGAGGGCAACCATGGAGGAG +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGGWARP*RATMEE
Trigger: CTCCTCCATGGTTGCCCTCCAGGGTCTAGCCCAGCC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCAGTGGGACCCACACTaGTCTGCATCAAGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGQWDPH*SASSFQ
Trigger: CTGGAAGCTTGATGCAGAGCAGTGTGGGTCCCACTG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCCTGGAGGGCAACCATaGAGGAGTGTGGGAAGGATT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGPGGQP*RSVGRI
Trigger: AATCCTTCCCACACTCCTCCATGGTTGCCCTCCAGG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAGAAACACGTGTTTGTaGAGAGGCGGCTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGRNTCL*RGGWAT
Trigger: AGTGGCCCAGCCGCCTCTCCACAAACACGTGTTTCT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGATACTCAAGCAGAGTaGGACAGAGCGGAACCTTCC +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGDTQAE*DRAEPS
Trigger: GGAAGGTTCCGCTCTGTCTCACTCTGCTTGAGTATC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCAGGCACTGAGAGACTaGTCAGTGGGATACTCAAGC +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGQALRD*SVGYSS
Trigger: GCTTGAGTATCCCACTGATCAGTCTCTCAGTGCCTG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCCACAGCAGCAGCTTTaGCATATGCCAAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGPQQQL*HMPSDH
Trigger: GTGGTCACTTGGCATATGGCAAAGCTGCTGCTGTGG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAAAAGGATTGGGGATTaGTTGGGCTGCTCTCCCACC +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGKRIGD*LGCSPT
Trigger: GGTGGGAGAGCAGCCCAACCAATCCCCAATCCTTTT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCCACCTTTATGTAGATaGAGTGAAGGCAGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGPPLCR*SEGRVV
Trigger: CACCACCCTGCCTTCACTTCATCTACATAAAGGTGG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTGTGGAGGCTCACCCTaGCCTCCAGCCTCGCCAACC +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVCGGSP*PPASPT
Trigger: GGTTGGCGAGGCTGGAGGGCAGGGTGAGCCTCCACA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTCATCTCAGTTTTCATaGGTCCATGGAGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGSSQFS*VHGGLP
Trigger: AGGCAGCCCTCCATGGACCCATGAAAACTGAGATGA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521288.2
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAACCATGGAGGAGTGTaGGAAGGATTCACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGNHGGV*EGFTLA
Trigger: AGCAAGGGTGAATCCTTCCCACACTCCTCCATGGTT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGGTGCTAGACTGGGGTaGGTCAATTCCCTTCTGATA +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGGARLG*VNSLLI
Trigger: TATCAGAAGGGAATTGACCCACCCCAGTCTAGCACC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCACCCATCCCAGCTCCTaGATCCTGATGAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPTHPSS*ILMRGR
Trigger: TCTTCCCCTCATCAGGATTCAGGAGCTGGGATGGGT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCAGGGTGGTGCTAGACTaGGGTGGGTCAATTCCCTTC +
Preference number: 2 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPRVVLD*GGSIPF
Trigger: GAAGGGAATTGACCCACCCCAGTCTAGCACCACCCT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCAAAAGGCTCTCACCTaGGAGATGCTATCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGQKALT*EMLSCH
Trigger: ATGACAGGATAGCATCTCCCAGGTGAGAGCCTTTTG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCCATACCGCCCTTCCTaGAACTGCTGCCATCATAGT +
Preference number: 2 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPPYRPS*NCCHHS
Trigger: ACTATGATGGCAGCAGTTTCAGGAAGGGCGGTATGG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGGAAATAGAGCCAGACTaGAGCAGTCCCAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMEIEPD*SSPKSW
Trigger: CCAGGACTTGGGACTGCTGCAGTCTGGCTCTATTTC...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGGCTGGGCTAGACCCTaGAGGGCAACCATGGAGGAG +
Preference number: 2 (lower is better)
Translates to: TALPETAAIIVIKHFMLLGWARP*RATMEE
Trigger: CTCCTCCATGGTTGCCCTCCAGGGTCTAGCCCAGCC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTGTTGCCATCAATATTaGCATGCTCTACCTCCCATC +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGCCHQY*HALPPI
Trigger: GATGGGAGGTAGAGCATGCCAATATTGATGGCAACA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CAA 90 bp GGCAGCAGCTCCAATCTGCATCTGTGCATCAGGATGAGCAGCACTTaGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GSSSNLHLCIRMSST*VKMLDTQTPSIWEL
Trigger: CAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTGCTCATCCTGATGCACAGATGCAGATTGGAGCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp AAGGCTCACACCTCACTAAAGCCTAGTGGCCCAACCTTCTGCAGGAAAATGACCCCGCCCCACCACCAATaGAGGAATGCTGAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: KAHTSLKPSGPTFCRKMTPPHHQ*RNAERN
Trigger: ATTTCTCTCAGCATTCCTGCATTGGTGGTGGGGCGG...GGTCATTTTCCTGCAGAAGGTTGGGCCACTAGGCTTTAGTGAGGTGTGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCACCATCTTGACTGTTaGCATCAATATTGGCATGCT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGHHLDC*HQYWHA
Trigger: AGCATGCCAATATTGATGGCAACAGTCAAGATGGTG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCTTTTTCTCTCTCCATaGATTACCTCCTCCAGTCTA +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGLFLSP*ITSSSL
Trigger: TAGACTGGAGGAGGTAATCCATGGAGAGAGAAAAAG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAGTGACTTTTTGCCCCTaGTGCCATAAGTTGGAGGGT +
Preference number: 2 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSVTFCP*CHKLEG
Trigger: ACCCTCCAACTTATGGCATCAGGGGCAAAAAGTCAC...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521288.2
3UTR-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAAACAAAATGTGCTGTaGAGCAGGAAAGTACATAGC +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGKQNVL*SRKVHS
Trigger: GCTATGTACTTTCCTGCTTCACAGCACATTTTGTTT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGGAAGGATTCACCCTTaGTTCAGAAGCTCCTTGCAA +
Preference number: 2 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPGRIHP*FRSSLQ
Trigger: TTGCAAGGAGCTTCTGAAGCAAGGGTGAATCCTTCC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTACTTCTCTGATAAGTaGCAAGGTCCAGCATCTTTT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGYFSDK*QGPASF
Trigger: AAAAGATGCTGGACCTTGGCACTTATCAGAGAAGTA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCTCAGAAGAAAAGGATTaGGGATTGGTTGGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPSEEKD*GLVGLL
Trigger: GAGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGA...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTAGGGTGGTGCTAGACTaGGGTGGGTCAATTCCCTTC +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVRVVLD*GGSIPF
Trigger: GAAGGGAATTGACCCACCCCAGTCTAGCACCACCCT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTTTAATACGAATAAGTaGACAGATGAGCTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGFNTNK*TDELPS
Trigger: ACTGGGCAGCTCATCTGTCCACTTATTCGTATTAAA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTAGAAACACGTGTTTGTaGAGAGGCGGCTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVRNTCL*RGGWAT
Trigger: AGTGGCCCAGCCGCCTCTCCACAAACACGTGTTTCT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTATAAAATCCCCTACCTaGCTCTTCTATACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: ILCPRITWECLWWVHTHGIKSPT*LFYTSL
Trigger: CAGAGAAGTATAGAAGAGCCAGGTAGGGGATTTTAT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCCATACCGCCCTTCCTaGAACTGCTGCCATCATAGT +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVPYRPS*NCCHHS
Trigger: ACTATGATGGCAGCAGTTTCAGGAAGGGCGGTATGG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCAGGCACTGAGAGACTaGTCAGTGGGATACTCAAGC +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVQALRD*SVGYSS
Trigger: GCTTGAGTATCCCACTGATCAGTCTCTCAGTGCCTG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAAGTGGCCCAACCTTCTaGAGGAAAATGACCCAAAAC +
Preference number: 2 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSSGPTF*RKMTQN
Trigger: GTTTTGGGTCATTTTCCTGCAGAAGGTTGGGCCACT...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCTCTCACCTGGGAGATaGTATCCTGTCATGCCTGCT +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVLSPGR*YPVMPA
Trigger: AGCAGGCATGACAGGATAGCATCTCCCAGGTGAGAG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCCTGGAGGGCAACCATaGAGGAGTGTGGGAAGGATT +
Preference number: 2 (lower is better)
Translates to: TALPETAAIIVIKHFMLLPGGQP*RSVGRI
Trigger: AATCCTTCCCACACTCCTCCATGGTTGCCCTCCAGG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGAGGTTAAACTGGACATaGCCAGGGGAAGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: TALPETAAIIVIKHFMLLRLNWT*PGEGVR
Trigger: CCTGACACCTTCCCCTGGTCATGTCCAGTTTAACCT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGGGACCAGGGTAGTGTaGCAAATGCCACTTCAAGGT +
Preference number: 2 (lower is better)
Translates to: TALPETAAIIVIKHFMLLGTRVV*QMPLQG
Trigger: ACCTTGAAGTGGCATTTGTCACACTACCCTGGTCCC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCCACCTTTATGTAGATaGAGTGAAGGCAGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVPPLCR*SEGRVV
Trigger: CACCACCCTGCCTTCACTTCATCTACATAAAGGTGG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGAAAAGGATTGGGGATTaGTTGGGCTGCTCTCCCACC +
Preference number: 2 (lower is better)
Translates to: TALPETAAIIVIKHFMLLKRIGD*LGCSPT
Trigger: GGTGGGAGAGCAGCCCAACCAATCCCCAATCCTTTT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGGTGCTAGACTGGGGTaGGTCAATTCCCTTCTGATA +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVGARLG*VNSLLI
Trigger: TATCAGAAGGGAATTGACCCACCCCAGTCTAGCACC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCAAAAGGCTCTCACCTaGGAGATGCTATCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVQKALT*EMLSCH
Trigger: ATGACAGGATAGCATCTCCCAGGTGAGAGCCTTTTG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCATCTTAAACATGCCTTaGCTCCATAGCTCTCTATTA +
Preference number: 2 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPILNMP*LHSSLL
Trigger: TAATAGAGAGCTATGGAGTCAAGGCATGTTTAAGAT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCTTCAATGGACAGTTTTaGCTCTGTTTTAGTGAAACC +
Preference number: 2 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPFNGQF*LCFSET
Trigger: GGTTTCACTAAAACAGAGGCAAAACTGTCCATTGAA...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp CAGTTTTCATGGGTCCATGGAGGGCTGCCTCTAGTGATGAGCTGGAATCTTAAGATACCCTTTCACCAGTaGTTGTCAAAATGTGGTCCT +
Preference number: 2 (lower is better)
Translates to: QFSWVHGGLPLVMSWNLKIPFHQ*LSKCGP
Trigger: AGGACCACATTTTGACAACCACTGGTGAAAGGGTAT...CTTAAGATTCCAGCTCATCACTAGAGGCAGCCCTCCATGGACCCATGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTAAGAGCCAACTGCTTTaGTCACCACTCAAGACAAGA +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVKSQLL*SPLKTR
Trigger: TCTTGTCTTGAGTGGTGACCAAAGCAGTTGGCTCTT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTCAGAAGAAAAGGATTaGGGATTGGTTGGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: TALPETAAIIVIKHFMLLSEEKD*GLVGLL
Trigger: GAGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAGTGGTTGTCAAAATGTaGTCCTCAGATTATTTGCAT +
Preference number: 2 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSVVVKM*SSDYLH
Trigger: ATGCAAATAATCTGAGGACCACATTTTGACAACCAC...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGAAGAGCCAACTGCTTTaGTCACCACTCAAGACAAGA +
Preference number: 2 (lower is better)
Translates to: TALPETAAIIVIKHFMLLKSQLL*SPLKTR
Trigger: TCTTGTCTTGAGTGGTGACCAAAGCAGTTGGCTCTT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp TCAAAGATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATCTACTAGCCCTGCCTaGAATATCAGGGCCACATCT +
Preference number: 2 (lower is better)
Translates to: SKMYSYPFTSGCQNVVLRSTSPA*NIRATS
Trigger: AGATGTGGCCCTGATATTTCAGGCAGGGCTAGTAGA...TCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR TCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGAGGTTAAACTGGACATaGCCAGGGGAAGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMRLNWT*PGEGVR
Trigger: CCTGACACCTTCCCCTGGTCATGTCCAGTTTAACCT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGGGACCAGGGTAGTGTaGCAAATGCCACTTCAAGGT +
Preference number: 2 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMGTRVV*QMPLQG
Trigger: ACCTTGAAGTGGCATTTGTCACACTACCCTGGTCCC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTAAACAAAATGTGCTGTaGAGCAGGAAAGTACATAGC +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVKQNVL*SRKVHS
Trigger: GCTATGTACTTTCCTGCTTCACAGCACATTTTGTTT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTCCCTTTGCTATTCTTaGTTTTCGAGTGTAAGAAGG +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVSLCYS*FSSVRR
Trigger: CCTTCTTACACTCGAAAAGCAAGAATAGCAAAGGGA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGGATTGGGGATTGGTTaGGCTGCTCTCCCACCTTTT +
Preference number: 2 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMGLGIG*AALPPF
Trigger: AAAAGGTGGGAGAGCAGCCCAACCAATCCCCAATCC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTATAAAATCCCCTACCTaGCTCTTCTATACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVIKSPT*LFYTSL
Trigger: CAGAGAAGTATAGAAGAGCCAGGTAGGGGATTTTAT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR TCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGTGACTTTTTGCCCCTaGTGCCATAAGTTGGAGGGT +
Preference number: 2 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMVTFCP*CHKLEG
Trigger: ACCCTCCAACTTATGGCATCAGGGGCAAAAAGTCAC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGAACCATGGAGGAGTGTaGGAAGGATTCACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMNHGGV*EGFTLA
Trigger: AGCAAGGGTGAATCCTTCCCACACTCCTCCATGGTT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGTATTAGTGTTGACCTaGATTACATCCCATAATGAG +
Preference number: 2 (lower is better)
Translates to: QHFGENARHTNSLHLGAVVLVLT*ITSHNE
Trigger: CTCATTATGGGATGTAATCCAGGTCAACACTAATAC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CAA 90 bp AGTGGCTACTGCCTCAAAGATGTATTCATACCCTTTCACCAGTGGTaGTCAAAATGTGGTCCTCAGATTATTTGCATCAGCATTATTTGG +
Preference number: 2 (lower is better)
Translates to: SGYCLKDVFIPFHQW*SKCGPQIICISIIW
Trigger: CCAAATAATGCTGATGCAAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTTTGAGGCAGTAGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR CAA 90 bp AGTTCTCTAACAGAGAGATCCCTCTCCTTAAATTCTTTCTTGGTGTaGCCAGCTGTTCCTGCATGTCTTATCTTTTCTCTCACCTCATTT +
Preference number: 2 (lower is better)
Translates to: SSLTERSLSLNSFLV*PAVPACLIFSLTSF
Trigger: AAATGAGGTGAGAGAAAAGATAAGACATGCAGGAACAGCTGGCAACACCAAGAAAGAATTTAAGGAGAGGGATCTCTCTGTTAGAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CAA 90 bp ATGTTAAGTTCTCTAACAGAGAGATCCCTCTCCTTAAATTCTTTCTaGGTGTTGCCAGCTGTTCCTGCATGTCTTATCTTTTCTCTCACC +
Preference number: 2 (lower is better)
Translates to: MLSSLTERSLSLNSF*VLPAVPACLIFSLT
Trigger: GGTGAGAGAAAAGATAAGACATGCAGGAACAGCTGGCAACACCAAGAAAGAATTTAAGGAGAGGGATCTCTCTGTTAGAGAACTTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR GCA 90 bp ACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATTTGCATCAGCATTATTTGGGGATGATTCTGCTACCTaGCAAATTTTGAGAACCACC +
Preference number: 2 (lower is better)
Translates to: TSGCQNVVLRLFASALFGDDSAT*QILRTT
Trigger: GGTGGTTCTCAAAATTTGGCAGGTAGCAGAATCATC...CCCAAATAATGCTGATGCAAATAATCTGAGGACCACATTTTGACAACCACTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR CCA 72 bp GGAATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTaGTGGGTACATACCCATGGTGAGGGCACAGGCAGC +
Preference number: 3 (lower is better)
Translates to: GILCPRITWECL*WVHTHGEGTGS
Trigger: GCTGCCTGTGCCCTCACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAAGGAGGTCAAGGGCTaGGGTCAAAGTCACCACAGC +
Preference number: 3 (lower is better)
Translates to: ILCPRITWECLWWVHTHGKEVKG*GQSHHS
Trigger: GCTGTGGTGACTTTGACCCAAGCCCTTGACCTCCTT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 72 bp GAGTGGAAAGAGGGAATCCTCTGCCCCCGCATCACCTaGGAATGCCTGTGGTGGGTACATACCCATGGTGAG +
Preference number: 3 (lower is better)
Translates to: EWKEGILCPRIT*ECLWWVHTHGE
Trigger: CTCACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGATTCCCTCTTTCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 72 bp CCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATaGGTCCATGGAGGGCTGCCTCTAGTGATGAGCTGG +
Preference number: 3 (lower is better)
Translates to: PSLVPRSSSQFS*VHGGLPLVMSW
Trigger: CCAGCTCATCACTAGAGGCAGCCCTCCATGGACCCATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR CAA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGAGGATTGGGGATTGGTaGGGCTGCTCTCCCACCTTT +
Preference number: 3 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMRIGDW*GCSPTF
Trigger: AAAGGTGGGAGAGCAGCCCAACCAATCCCCAATCCT...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
3UTR-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCTGTTGCCATCAATATaGGCATGCTCTACCTCCCAT +
Preference number: 3 (lower is better)
Translates to: ILCPRITWECLWWVHTHGLLPSI*ACSTSH
Trigger: ATGGGAGGTAGAGCATGCCAATATTGATGGCAACAG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGGGAAGGATTCACCCTaGCTTCAGAAGCTCCTTGCA +
Preference number: 3 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPGKDSP*LQKLLA
Trigger: TGCAAGGAGCTTCTGAAGCAAGGGTGAATCCTTCCC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCAGGTGCCACTGGCCTaGTGGCCACTCCTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVQVPLA*WPLLLF
Trigger: GAACAAGAGGAGTGGCCACAAGGCCAGTGGCACCTG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGTGTGTTGTTACAGATaGTATATTTGCATGCCTGGG +
Preference number: 3 (lower is better)
Translates to: ILCPRITWECLWWVHTHGVCCYR*YICMPG
Trigger: CCCAGGCATGCAAATATACAATCTGTAACAACACAC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCATTAACCTGAGCCCCTaGAAGGCCAACTTCTCACAC +
Preference number: 3 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPINLSP*KANFSH
Trigger: GTGTGAGAAGTTGGCCTTCAAGGGGCTCAGGTTAAT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGTCCCTTTGCTATTCTaGCTTTTCGAGTGTAAGAAG +
Preference number: 3 (lower is better)
Translates to: ILCPRITWECLWWVHTHGVPLLF*LFECKK
Trigger: CTTCTTACACTCGAAAAGCAAGAATAGCAAAGGGAC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTAGGATTGGGGATTGGTaGGGCTGCTCTCCCACCTTT +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVRIGDW*GCSPTF
Trigger: AAAGGTGGGAGAGCAGCCCAACCAATCCCCAATCCT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGAAAAGGATTGGGGATaGGTTGGGCTGCTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVEKDWG*VGLLSH
Trigger: GTGGGAGAGCAGCCCAACCAATCCCCAATCCTTTTC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCCCAAACTTTTAGGATaGGGCCTCCTCAGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVPKLLG*GLLRAL
Trigger: CAAGGCCCTGAGGAGGCCCAATCCTAAAAGTTTGGG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCTGTTGCCATCAATATaGGCATGCTCTACCTCCCAT +
Preference number: 3 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPLLPSI*ACSTSH
Trigger: ATGGGAGGTAGAGCATGCCAATATTGATGGCAACAG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATTCAGAAGAAAAGGATaGGGGATTGGTTGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSFRRKG*GIGWAA
Trigger: AGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGAA...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521288.2
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTTGTGGCCACTCCTCTaGTTCACCAAGGATGCTGAC +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVLWPLL*FTKDAD
Trigger: GTCAGCATCCTTGGTGAACAAGAGGAGTGGCCACAA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR GCA 72 bp GCACTCTGCATAGTCCGCTTTCTGTCTTCTTTAACGTaGCTGGTTCCCTCTGCCCAAACTTTTAGGATTGGG +
Preference number: 3 (lower is better)
Translates to: ALCIVRFLSSLT*LVPSAQTFRIG
Trigger: CCCAATCCTAAAAGTTTGGGCAGAGGGAACCAGGCACGTTAAAGAAGACAGAAAGCGGACTATGCAGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGGGAAGGATTCACCCTaGCTTCAGAAGCTCCTTGCA +
Preference number: 3 (lower is better)
Translates to: TALPETAAIIVIKHFMLLGKDSP*LQKLLA
Trigger: TGCAAGGAGCTTCTGAAGCAAGGGTGAATCCTTCCC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTTCAGAAGAAAAGGATaGGGGATTGGTTGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVFRRKG*GIGWAA
Trigger: AGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGAA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCCCCTTTCTGTTTTATaGAGCCATATGAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVPLSVL*SHMRLQ
Trigger: CTGCAGCCTCATATGGCTCAATAAAACAGAAAGGGG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGTGTCAGGCTGTGTGTaGTTACAGATTGTATATTTG +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVVSGCV*LQIVYL
Trigger: CAAATATACAATCTGTAACAACACACAGCCTGACAC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGTGCTTCAGAAGCTCCTaGCAATCAGGGACCAGGGTA +
Preference number: 3 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMCFRSS*QSGTRV
Trigger: TACCCTGGTCCCTGATTGCAAGGAGCTTCTGAAGCA...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTCTCATCACACCATCTaGACTGTTGCCATCAATATT +
Preference number: 3 (lower is better)
Translates to: QHFGENARHTNSLHLGAVSHHTI*TVAINI
Trigger: AATATTGATGGCAACAGTCAAGATGGTGTGATGAGA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR-3UTR CAA 90 bp CTCTATCAATTAATCTTTCCCACATCTGCTTCTAAACCTCTAGTGGCTACTGCCAGAATAAAACCTAGGTaGCCACACCTAGATAATGTG +
Preference number: 3 (lower is better)
Translates to: LYQLIFPTSASKPLVATARIKPR*PHLDNV
Trigger: CACATTATCTAGGTGTGGCAACCTAGGTTTTATTCT...GGCAGTAGCCACTAGAGGTTTAGAAGCAGATGTGGGAAAGATTAATTGATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGTGTGTTGTTACAGATaGTATATTTGCATGCCTGGG +
Preference number: 3 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMVCCYR*YICMPG
Trigger: CCCAGGCATGCAAATATACAATCTGTAACAACACAC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CCA 72 bp TGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTaGTCCTCAGATTATTTGCATCAGCATTATTTGGGA +
Preference number: 3 (lower is better)
Translates to: CIHTLSPVVVKM*SSDYLHQHYLG
Trigger: TCCCAAATAATGCTGATGCAAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR CCA 72 bp CAAAACATATGGTACACACTTCTCCTTCTTTTCATCTaGTATCATGTATCATCTCTCAGATCCAATAAGAAA +
Preference number: 3 (lower is better)
Translates to: QNIWYTLLLLFI*YHVSSLRSNKK
Trigger: TTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGAAAAGAAGGAGAAGTGTGTACCATATGTTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTGCGGGCTCCGGCCATaGCCGGACACTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGCGLRP*PDTAPL
Trigger: CAGAGGAGCAGTGTCCGGCCATGGCCGGAGCCCGCA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGAGCCTGGGCGGTGCTaGAAGGCCCAATCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGEPGRC*KAQSLQ
Trigger: CTGCAGGGATTGGGCCTTGCAGCACCGCCCAGGCTC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537561.5
CDS-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTACCCGACGTGGGAGCTaGGGTAGTCAGTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGTRRGS*GSQCAP
Trigger: TGGAGCGCACTGACTACCGCAGCTCCCACGTCGGGT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp AAGGCTCACACCTCACTAAAGCCTAGTGGCCCAACCTTCTGCAGGAAAATGACCCACAACGCGTGGCCCTaGCCCGACGTGGGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: KAHTSLKPSGPTFCRKMTHNAWP*PDVGAA
Trigger: CGCAGCTCCCACGTCGGGTCAGGGCCACGCGTTGTG...GGTCATTTTCCTGCAGAAGGTTGGGCCACTAGGCTTTAGTGAGGTGTGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGACTGGGACTGTAGGTaGGGGTCTTGGCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGDWDCR*GSWLSP
Trigger: TGGACTCAGCCAAGACCCTCACCTACAGTCCCAGTC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCTCCGAGCCTGGGCGGTaGTGCAAGGCCCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPSEPGR*CKAQSL
Trigger: CAGGGATTGGGCCTTGCAGCACCGCCCAGGCTCGGA...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537561.5
CDS-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCCAGTAGGCAGGCACTaGGAGACTGATCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGPVGRH*ETDQWD
Trigger: ATCCCACTGATCAGTCTCTCAGTGCCTGCCTACTGG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCACGTAGCGCAGCGGGATaGGGCCGAAGAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSRSAAG*GRRASQ
Trigger: CTGGGATGCTCTTCGGCCGCATCCCGCTGCGCTACG...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502852.1
ENST00000521288.2
CDS-3UTR GCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGGCCATGGCCGGACACTaGTCCTCTGCTGTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMAMAGH*SSAVPK
Trigger: CTTCGGGACAGCAGAGGAGCAGTGTCCGGCCATGGC...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGTGGAGGCTCACCCTaGCCTCCAGCCTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSCGGSP*PPASPT
Trigger: GGTTGGCGAGGCTGGAGGGCAGGGTGAGCCTCCACA...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp CAGTTTTCATGGGTCCATGGAGGGCTGCCTCTAGTGATGAGCTGGAATCTTAAGTGCGGGCTCCGGCCATaGCCGGACACTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QFSWVHGGLPLVMSWNLKCGLRP*PDTAPL
Trigger: CAGAGGAGCAGTGTCCGGCCATGGCCGGAGCCCGCA...CTTAAGATTCCAGCTCATCACTAGAGGCAGCCCTCCATGGACCCATGAAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGCTCCTCCCTGGCTCTaGCCAGCAACCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPAPPWL*PATPGH
Trigger: ATGACCTGGGGTTGCTGGCCAGAGCCAGGGAGGAGC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGAAGCTGCTACAGGCTaGAACCCCAGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPEAATG*NPRGHW
Trigger: CCAGTGGCCCCTGGGGTTCCAGCCTGTAGCAGCTTC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCCTTGTCTGTTTCACTaGCCGGCTCCCAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGPCLFH*PAPSSK
Trigger: CTTAGAGCTGGGAGCCGGCCAGTGAAACAGACAAGG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCACAACGCGTGGCCCTaGCCCGACGTGGGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLHNAWP*PDVGAA
Trigger: CGCAGCTCCCACGTCGGGTCAGGGCCACGCGTTGTG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAGGTTAAACTGGACATaGCCAGGGGAAGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGRLNWT*PGEGVR
Trigger: CCTGACACCTTCCCCTGGTCATGTCCAGTTTAACCT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp AAGGCTCACACCTCACTAAAGCCTAGTGGCCCAACCTTCTGCAGGAAAATGACCACCCGACGTGGGAGCTaGGGTAGTCAGTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: KAHTSLKPSGPTFCRKMTTRRGS*GSQCAP
Trigger: TGGAGCGCACTGACTACCGCAGCTCCCACGTCGGGT...GGTCATTTTCCTGCAGAAGGTTGGGCCACTAGGCTTTAGTGAGGTGTGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAACCCGACGTGGGAGCTaGGGTAGTCAGTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSTRRGS*GSQCAP
Trigger: TGGAGCGCACTGACTACCGCAGCTCCCACGTCGGGT...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502852.1
ENST00000521288.2
CDS-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCTCTCACCTGGGAGATaGTATCCTGTCATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGLSPGR*YPVMPA
Trigger: AGCAGGCATGACAGGATAGCATCTCCCAGGTGAGAG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGCTGCTTCAAGTAACTaGTCCCGCGCAGAGCCAATA +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGAASSN*SRAEPI
Trigger: TATTGGCTCTGCGCGGGAGCAGTTACTTGAAGCAGC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537561.5
CDS-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGACTGTCTATGTGAGTaGGATGAACACAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGDCLCE*DEHKPQ
Trigger: CTGGGGTTTGTGTTCATCTCACTCACATAGACAGTC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCTCAACCAGTACAGCCTaGCTTCCATACCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPSTSTA*LPYRPS
Trigger: GGAAGGGCGGTATGGAAGGCAGGCTGTACTGGTTGA...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTGTGGAGGCTCACCCTaGCCTCCAGCCTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLCGGSP*PPASPT
Trigger: GGTTGGCGAGGCTGGAGGGCAGGGTGAGCCTCCACA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGGACCCACACTGCTCTaGATCAAGCTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPGPTLL*IKLPDH
Trigger: GTGGTCTGGAAGCTTGATGCAGAGCAGTGTGGGTCC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCAGTGGGACCCACACTaGTCTGCATCAAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPQWDPH*SASSFQ
Trigger: CTGGAAGCTTGATGCAGAGCAGTGTGGGTCCCACTG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTCAGAAGAAAAGGATTaGGGATTGGTTGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGSEEKD*GLVGLL
Trigger: GAGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGCTCCTCCCTGGCTCTaGCCAGCAACCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVAPPWL*PATPGH
Trigger: ATGACCTGGGGTTGCTGGCCAGAGCCAGGGAGGAGC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAGTGCCACTGGCCTTGTaGCCACTCCTCTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSVPLAL*PLLLFT
Trigger: GGTGAACAAGAGGAGTGGCCACAAGGCCAGTGGCAC...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCAGAAACACGTGTTTGTaGAGAGGCGGCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPRNTCL*RGGWAT
Trigger: AGTGGCCCAGCCGCCTCTCCACAAACACGTGTTTCT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGTGGGGAGAAGGCACATaGTTTCTCTTTGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMWGEGT*FLFVGA
Trigger: GGCCCCCACAAAGAGAAACCATGTGCCTTCTCCCCA...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGAGGTTAAACTGGACATaGCCAGGGGAAGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMRLNWT*PGEGVR
Trigger: CCTGACACCTTCCCCTGGTCATGTCCAGTTTAACCT...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGGGACCAGGGTAGTGTaGCAAATGCCACTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPGTRVV*QMPLQG
Trigger: ACCTTGAAGTGGCATTTGTCACACTACCCTGGTCCC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGGATCCAGAATTACCTaGGGGAAGGGGTCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPGSRIT*GKGSVS
Trigger: GCTAACAGACCCCTTCCCTCAGGTAATTCTGGATCC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGATACTCAAGCAGAGTaGGACAGAGCGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPDTQAE*DRAEPS
Trigger: GGAAGGTTCCGCTCTGTCTCACTCTGCTTGAGTATC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGGTGAGGGTCTTGGCTaGGTCCAGGAGCTTTCTATA +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPGEGLG*VQELSI
Trigger: TATAGAAAGCTCCTGGACTCAGCCAAGACCCTCACC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCTGTCTTCTAGAGACCTaGAGAAGGTGGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPCLLET*RRWEDW
Trigger: CCAGTCCTCCCACCTTCTTCAGGTCTCTAGAAGACA...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATCAACCAGTACAGCCTaGCTTCCATACCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSSTSTA*LPYRPS
Trigger: GGAAGGGCGGTATGGAAGGCAGGCTGTACTGGTTGA...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTATTCTTTCTTGGTGTTaGCAGCTGTTCCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGILSWC*QLFLHV
Trigger: GACATGCAGGAACAGCTGGCAACACCAAGAAAGAAT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCATAATAGGAGCCACTaGCTCACAGCCAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPHNRSH*LTASPQ
Trigger: TTGTGGGCTGGCTGTGAGGCAGTGGCTCCTATTATG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGGGATTGGGGATTGGTTaGGCTGCTCTCCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMGLGIG*AALPPF
Trigger: AAAAGGTGGGAGAGCAGCCCAACCAATCCCCAATCC...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCAAAAGGATTGGGGATTaGTTGGGCTGCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPKRIGD*LGCSPT
Trigger: GGTGGGAGAGCAGCCCAACCAATCCCCAATCCTTTT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATTTGAGAGCGTGGCACGCATaGCGCCAGCCCGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CIHTLSPVVVKMWSSDYLRAWHA*RQPDPS
Trigger: GCTGGGGTCGGGCTGGCGTCATGCGTGCCACGCTCT...CAAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR TCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCAGAGCGTGGCACGCATaGCGCCAGCCCGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVRAWHA*RQPDPS
Trigger: GCTGGGGTCGGGCTGGCGTCATGCGTGCCACGCTCT...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCCACCTTTATGTAGATaGAGTGAAGGCAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPPPLCR*SEGRVV
Trigger: CACCACCCTGCCTTCACTTCATCTACATAAAGGTGG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCAAACCCCAGTACAGTaGAACACTTTTATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGQTPVQ*NTFMKA
Trigger: AGCCTTCATAAAAGTGTTTCACTGTACTGGGGTTTG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCAAGTGCTGCCTCATCTaGTCTCACCACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPKCCLI*SHHRNH
Trigger: GTGATTCCTGTGGTGAGATCAGATGAGGCAGCACTT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGACTGGGACTGTAGGTaGGGGTCTTGGCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVDWDCR*GSWLSP
Trigger: TGGACTCAGCCAAGACCCTCACCTACAGTCCCAGTC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp AAGGCTCACACCTCACTAAAGCCTAGTGGCCCAACCTTCTGCAGGAAAATGACCGAAATAGAGCCAGACTaGAGCAGTCCCAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KAHTSLKPSGPTFCRKMTEIEPD*SSPKSW
Trigger: CCAGGACTTGGGACTGCTGCAGTCTGGCTCTATTTC...GGTCATTTTCCTGCAGAAGGTTGGGCCACTAGGCTTTAGTGAGGTGTGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGCATCTGTCGGTTTCTTaGTTCAGCACCCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMHLSVS*FSTHVE
Trigger: CTCCACATGGGTGCTGAAGCAAGAAACCGACAGATG...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCATCTGTCGGTTTCTTaGTTCAGCACCCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPHLSVS*FSTHVE
Trigger: CTCCACATGGGTGCTGAAGCAAGAAACCGACAGATG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTTTCATACCGCTCAATaGATCTCTGCAAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGFHTAQ*ISASLS
Trigger: GGATAAGCTTGCAGAGATGCATTGAGCGGTATGAAA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGGTTTTCATGGGTCCATaGAGGGCTGCCTCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMVFMGP*RAASSD
Trigger: ATCACTAGAGGCAGCCCTCCATGGACCCATGAAAAC...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502852.1
ENST00000521288.2
CDS-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTGCCCCCGCATCACCTaGGAATGCCTGTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLCPRIT*ECLWWV
Trigger: TACCCACCACAGGCATTCCCAGGTGATGCGGGGGCA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCACTTGCCCTGCCCTTCTaGTGTTGCCTTAATCAACCT +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSLALPF*CCLNQP
Trigger: AGGTTGATTAAGGCAACAGCAGAAGGGCAGGGCAAG...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAGGTGCTAGACTGGGGTaGGTCAATTCCCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSGARLG*VNSLLI
Trigger: TATCAGAAGGGAATTGACCCACCCCAGTCTAGCACC...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTGGGGAGAAGGCACATaGTTTCTCTTTGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVWGEGT*FLFVGA
Trigger: GGCCCCCACAAAGAGAAACCATGTGCCTTCTCCCCA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGGGACCAGGGTAGTGTaGCAAATGCCACTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVGTRVV*QMPLQG
Trigger: ACCTTGAAGTGGCATTTGTCACACTACCCTGGTCCC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGCTTTCTATACTTGTTaGAAACCCCATCGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPAFYTC*KPHRGV
Trigger: AACCCCTCGATGGGGTTTTCAACAAGTATAGAAAGC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTGTCTTCTAGAGACCTaGAGAAGGTGGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVCLLET*RRWEDW
Trigger: CCAGTCCTCCCACCTTCTTCAGGTCTCTAGAAGACA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTCCAGTAAAACTGCATaGGTAATATCCATGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGSSKTA*VISMLL
Trigger: CAAAAGCATGGATATTACTCATGCAGTTTTACTGGA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp AAGATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATTACGTAGCGCAGCGGGATaGGGCCGAAGAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: KMYSYPFTSGCQNVVLRLRSAAG*GRRASQ
Trigger: CTGGGATGCTCTTCGGCCGCATCCCGCTGCGCTACG...TAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGAAATAGAGCCAGACTaGAGCAGTCCCAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVEIEPD*SSPKSW
Trigger: CCAGGACTTGGGACTGCTGCAGTCTGGCTCTATTTC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGACCTCATTGTACAGCTaGTCCCCCACTGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLTSLYS*SPTGYS
Trigger: GGAGTACCCAGTGGGGGAGCAGCTGTACAATGAGGT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp CAGTTTTCATGGGTCCATGGAGGGCTGCCTCTAGTGATGAGCTGGAATCTTAAGTCATCTCAGTTTTCATaGGTCCATGGAGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QFSWVHGGLPLVMSWNLKSSQFS*VHGGLP
Trigger: AGGCAGCCCTCCATGGACCCATGAAAACTGAGATGA...CTTAAGATTCCAGCTCATCACTAGAGGCAGCCCTCCATGGACCCATGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCAAGAGCCAACTGCTTTaGTCACCACTCAAGACAAGA +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPKSQLL*SPLKTR
Trigger: TCTTGTCTTGAGTGGTGACCAAAGCAGTTGGCTCTT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGGATTGGGGATTGGTTaGGCTGCTCTCCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVGLGIG*AALPPF
Trigger: AAAAGGTGGGAGAGCAGCCCAACCAATCCCCAATCC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGTATTAGTGTTGACCTaGATTACATCCCATAATGAG +
Preference number: 4 (lower is better)
Translates to: ILCPRITWECLWWVHTHGVLVLT*ITSHNE
Trigger: CTCATTATGGGATGTAATCCAGGTCAACACTAATAC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCCTTGTCTGTTTCACTaGCCGGCTCCCAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLPCLFH*PAPSSK
Trigger: CTTAGAGCTGGGAGCCGGCCAGTGAAACAGACAAGG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTGGGAATGCCTGTGGTaGGTACATACCCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVWECLW*VHTHGE
Trigger: CTCACCATGGGTATGTACCCACCACAGGCATTCCCA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTACCTGGGAATGCCTGTaGTGGGTACATACCCATGGT +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVTWECL*WVHTHG
Trigger: ACCATGGGTATGTACCCACCACAGGCATTCCCAGGT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGGATCCAGAATTACCTaGGGGAAGGGGTCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLGSRIT*GKGSVS
Trigger: GCTAACAGACCCCTTCCCTCAGGTAATTCTGGATCC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCAGGCACTGAGAGACTaGTCAGTGGGATACTCAAGC +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLQALRD*SVGYSS
Trigger: GCTTGAGTATCCCACTGATCAGTCTCTCAGTGCCTG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGGTGAGGGTCTTGGCTaGGTCCAGGAGCTTTCTATA +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLGEGLG*VQELSI
Trigger: TATAGAAAGCTCCTGGACTCAGCCAAGACCCTCACC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTAGAGCTTCAAGTAACTaGTCCCGCGCAGAGCCAATA +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVRASSN*SRAEPI
Trigger: TATTGGCTCTGCGCGGGAGCAGTTACTTGAAGCTCT...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCTCTCACCTGGGAGATaGTATCCTGTCATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLLSPGR*YPVMPA
Trigger: AGCAGGCATGACAGGATAGCATCTCCCAGGTGAGAG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAATTCTTTCTTGGTGTTaGCAGCTGTTCCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSILSWC*QLFLHV
Trigger: GACATGCAGGAACAGCTGGCAACACCAAGAAAGAAT...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCATAATAGGAGCCACTaGCTCACAGCCAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLHNRSH*LTASPQ
Trigger: TTGTGGGCTGGCTGTGAGGCAGTGGCTCCTATTATG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGAAGCTGCTACAGGCTaGAACCCCAGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMEAATG*NPRGHW
Trigger: CCAGTGGCCCCTGGGGTTCCAGCCTGTAGCAGCTTC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGACCTGGGAATGCCTGTaGTGGGTACATACCCATGGT +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLTWECL*WVHTHG
Trigger: ACCATGGGTATGTACCCACCACAGGCATTCCCAGGT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGAAGTGCTGCCTCATCTaGTCTCACCACAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLKCCLI*SHHRNH
Trigger: GTGATTCCTGTGGTGAGATCAGATGAGGCAGCACTT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATAATCTATCTACTAGCCCTGCCTGAAATATCAGGGCCACATCTCCTACACAAGCCGCCCCACCACCAATaGAGGAATGCTGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: IIYLLALPEISGPHLLHKPPHHQ*RNAERN
Trigger: ATTTCTCTCAGCATTCCTGCATTGGTGGTGGGGCGG...CTTGTGTAGGAGATGTGGCCCTGATATTTCAGGCAGGGCTAGTAGATAGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCCATCAATATTGGCATaGTCTACCTCCCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPPSILA*STSHLK
Trigger: TTTAAGATGGGAGGTAGAGCATGCCAATATTGATGG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAATACCCTTTCACCAGTaGTTGTCAAAATGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSIPFHQ*LSKCGP
Trigger: AGGACCACATTTTGACAACCACTGGTGAAAGGGTAT...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGAACCATGGAGGAGTGTaGGAAGGATTCACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLNHGGV*EGFTLA
Trigger: AGCAAGGGTGAATCCTTCCCACACTCCTCCATGGTT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCATAAAATCCCCTACCTaGCTCTTCTATACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPIKSPT*LFYTSL
Trigger: CAGAGAAGTATAGAAGAGCCAGGTAGGGGATTTTAT...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCTGCCCCCGCATCACCTaGGAATGCCTGTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVCPRIT*ECLWWV
Trigger: TACCCACCACAGGCATTCCCAGGTGATGCGGGGGCA...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGATCTTAAACATGCCTTaGCTCCATAGCTCTCTATTA +
Preference number: 4 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMILNMP*LHSSLL
Trigger: TAATAGAGAGCTATGGAGTCAAGGCATGTTTAAGAT...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCTCCAGTAAAACTGCATaGGTAATATCCATGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPSSKTA*VISMLL
Trigger: CAAAAGCATGGATATTACTCATGCAGTTTTACTGGA...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGGAAGGATTCACCCTTaGTTCAGAAGCTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLGRIHP*FRSSLQ
Trigger: TTGCAAGGAGCTTCTGAAGCAAGGGTGAATCCTTCC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATCATACCCTCTATTTTaGCTTTACCTGAGATTGCTC +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSSYPLF*LYLRLL
Trigger: GAGCAATCTCAGGTAAAGGCAAAATAGAGGGTATGA...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp ACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATTTGCATCAGCATTATTTGGGCTCCACCAAGAAAGCTaGGGAGAGGGCAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TSGCQNVVLRLFASALFGLHQES*GEGKVR
Trigger: TCTGACCTTGCCCTCTCCCCAGCTTTCTTGGTGGAG...CCCAAATAATGCTGATGCAAATAATCTGAGGACCACATTTTGACAACCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CCA 90 bp ATAATCTATCTACTAGCCCTGCCTGAAATATCAGGGCCACATCTCCTACACAAGGTTTTCATGGGTCCATaGAGGGCTGCCTCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: IIYLLALPEISGPHLLHKVFMGP*RAASSD
Trigger: ATCACTAGAGGCAGCCCTCCATGGACCCATGAAAAC...CTTGTGTAGGAGATGTGGCCCTGATATTTCAGGCAGGGCTAGTAGATAGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTGTTGCCATCAATATTaGCATGCTCTACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVCCHQY*HALPPI
Trigger: GATGGGAGGTAGAGCATGCCAATATTGATGGCAACA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGTGCCACTGGCCTTGTaGCCACTCCTCTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMVPLAL*PLLLFT
Trigger: GGTGAACAAGAGGAGTGGCCACAAGGCCAGTGGCAC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATTTAATACGAATAAGTaGACAGATGAGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSFNTNK*TDELPS
Trigger: ACTGGGCAGCTCATCTGTCCACTTATTCGTATTAAA...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTCATCTCAGTTTTCATaGGTCCATGGAGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLSSQFS*VHGGLL
Trigger: AAGCAGCCCTCCATGGACCCATGAAAACTGAGATGA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537561.5
CDS-3UTR TCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCACCCATCCCAGCTCCTaGATCCTGATGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVTHPSS*ILMRGR
Trigger: TCTTCCCCTCATCAGGATTCAGGAGCTGGGATGGGT...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCCCAGTAGGCAGGCACTaGGAGACTGATCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVPVGRH*ETDQWD
Trigger: ATCCCACTGATCAGTCTCTCAGTGCCTGCCTACTGG...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCTAGTTTTGACTCTCTaGCACCCGTTTGTGATTCTA +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVLVLTL*HPFVIL
Trigger: TAGAATCACAAACGGGTGTCAGAGAGTCAAAACTAG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGCTTTCTATACTTGTTaGAAACCCCATCGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLAFYTC*KPHRGV
Trigger: AACCCCTCGATGGGGTTTTCAACAAGTATAGAAAGC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCGGACCCACACTGCTCTaGATCAAGCTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVGPTLL*IKLPDH
Trigger: GTGGTCTGGAAGCTTGATGCAGAGCAGTGTGGGTCC...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGACCTCATTGTACAGCTaGTCCCCCACTGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMTSLYS*SPTGYS
Trigger: GGAGTACCCAGTGGGGGAGCAGCTGTACAATGAGGT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGTTGCCAGCTGTTCCTaGATGTCTTATCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVVASCS*MSYLFS
Trigger: AGAGAAAAGATAAGACATGCAGGAACAGCTGGCAAC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp ACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATTTGCATCAGCATTATTTGGGCCAGGGATGCTTTCTTaGGGGAGAGAAAGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TSGCQNVVLRLFASALFGPGMLS*GRESFG
Trigger: CCCAAAGCTTTCTCTCCCCCAAGAAAGCATCCCTGG...CCCAAATAATGCTGATGCAAATAATCTGAGGACCACATTTTGACAACCACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGCCTGGAGGGCAACCATaGAGGAGTGTGGGAAGGATT +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMPGGQP*RSVGRI
Trigger: AATCCTTCCCACACTCCTCCATGGTTGCCCTCCAGG...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCTTTTTCTCTCTCCATaGATTACCTCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVLFLSP*ITSSSL
Trigger: TAGACTGGAGGAGGTAATCCATGGAGAGAGAAAAAG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCCCATACCGCCCTTCCTaGAACTGCTGCCATCATAGT +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVPYRPS*NCCHHS
Trigger: ACTATGATGGCAGCAGTTTCAGGAAGGGCGGTATGG...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp CTCTATCAATTAATCTTTCCCACATCTGCTTCTAAACCTCTAGTGGCTACTGCCAGTGGCCCAACCTTCTaGAGGAAAATGACCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LYQLIFPTSASKPLVATASGPTF*RKMTQN
Trigger: GTTTTGGGTCATTTTCCTGCAGAAGGTTGGGCCACT...GGCAGTAGCCACTAGAGGTTTAGAAGCAGATGTGGGAAAGATTAATTGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTCATACCCTCTATTTTaGCTTTACCTGAGATTGCTC +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVSYPLF*LYLRLL
Trigger: GAGCAATCTCAGGTAAAGGCAAAATAGAGGGTATGA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTTTCATACCGCTCAATaGATCTCTGCAAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLFHTAQ*ISASLS
Trigger: GGATAAGCTTGCAGAGATGCATTGAGCGGTATGAAA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTACTTCTCTGATAAGTaGCAAGGTCCAGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: QHFGENARHTNSLHLGAVYFSDK*QGPASF
Trigger: AAAAGATGCTGGACCTTGGCACTTATCAGAGAAGTA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CAA 72 bp CATCCTAATCTTCTATACTTGCCCCTTTCTGTTTTATaGAGCCATATGAGGCTGCAGGACTGTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HPNLLYLPLSVL*SHMRLQDCVSS
Trigger: GGAAGAGACACAGTCCTGCAGCCTCATATGGCTCAATAAAACAGAAAGGGGCAAGTATAGAAGATTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp AAGATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATCTACTAGCCCTGCCTaGAATATCAGGGCCACATCT +
Preference number: 4 (lower is better)
Translates to: KMYSYPFTSGCQNVVLRLSTSPA*NIRATS
Trigger: AGATGTGGCCCTGATATTTCAGGCAGGGCTAGTAGA...TAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR TCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGCCACCTTTATGTAGATaGAGTGAAGGCAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMPPLCR*SEGRVV
Trigger: CACCACCCTGCCTTCACTTCATCTACATAAAGGTGG...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp AAGATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATTAAGAGCTTCAAGTAACTaGTCCCGCGCAGAGCCAATA +
Preference number: 4 (lower is better)
Translates to: KMYSYPFTSGCQNVVLRLRASSN*SRAEPI
Trigger: TATTGGCTCTGCGCGGGAGCAGTTACTTGAAGCTCT...TAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCCATCAATATTGGCATaGTCTACCTCCCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLPSILA*STSHLK
Trigger: TTTAAGATGGGAGGTAGAGCATGCCAATATTGATGG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGCTTGCCCTGCCCTTCTaGTGTTGCCTTAATCAACCT +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMLALPF*CCLNQP
Trigger: AGGTTGATTAAGGCAACAGCAGAAGGGCAGGGCAAG...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCTCATCTCAGTTTTCATaGGTCCATGGAGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVSSQFS*VHGGLP
Trigger: AGGCAGCCCTCCATGGACCCATGAAAACTGAGATGA...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
3UTR CAA 72 bp ACAGAGAGATCCCTCTCCTTAAATTCTTTCTTGGTGTaGCCAGCTGTTCCTGCATGTCTTATCTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TERSLSLNSFLV*PAVPACLIFSL
Trigger: GAGAGAAAAGATAAGACATGCAGGAACAGCTGGCAACACCAAGAAAGAATTTAAGGAGAGGGATCTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp CTCTATCAATTAATCTTTCCCACATCTGCTTCTAAACCTCTAGTGGCTACTGCCAATTCAGAGTATAGATaGTCACGATCCCAACTCCAC +
Preference number: 4 (lower is better)
Translates to: LYQLIFPTSASKPLVATANSEYR*SRSQLH
Trigger: GTGGAGTTGGGATCGTGATCATCTATACTCTGAATT...GGCAGTAGCCACTAGAGGTTTAGAAGCAGATGTGGGAAAGATTAATTGATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR TCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGATCTTAAACATGCCTTaGCTCCATAGCTCTCTATTA +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLILNMP*LHSSLL
Trigger: TAATAGAGAGCTATGGAGTCAAGGCATGTTTAAGAT...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGACTGTCTATGTGAGTaGGATGAACACAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMDCLCE*DEHKPQ
Trigger: CTGGGGTTTGTGTTCATCTCACTCACATAGACAGTC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCGGAAGGATTCACCCTTaGTTCAGAAGCTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVGRIHP*FRSSLQ
Trigger: TTGCAAGGAGCTTCTGAAGCAAGGGTGAATCCTTCC...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTTCAATGGACAGTTTTaGCTCTGTTTTAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLFNGQF*LCFSET
Trigger: GGTTTCACTAAAACAGAGGCAAAACTGTCCATTGAA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGTCAGAAGAAAAGGATTaGGGATTGGTTGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMSEEKD*GLVGLL
Trigger: GAGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGA...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCCAAAAGGCTCTCACCTaGGAGATGCTATCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVQKALT*EMLSCH
Trigger: ATGACAGGATAGCATCTCCCAGGTGAGAGCCTTTTG...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CCA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGTATTAGTGTTGACCTaGATTACATCCCATAATGAG +
Preference number: 4 (lower is better)
Translates to: TALPETAAIIVIKHFMLLVLVLT*ITSHNE
Trigger: CTCATTATGGGATGTAATCCAGGTCAACACTAATAC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
3UTR CAA 72 bp ATAAGACGCCCCGATGATTCTGCTACCTGCCAAATTTaGAGAACCACCTTCATACATAATCTATCTACTAGC +
Preference number: 4 (lower is better)
Translates to: IRRPDDSATCQI*RTTFIHNLSTS
Trigger: GCTAGTAGATAGATTATGTATGAAGGTGGTTCTCAAAATTTGGCAGGTAGCAGAATCATCGGGGCGTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
3UTR CAA 72 bp TCTCTAACAGAGAGATCCCTCTCCTTAAATTCTTTCTaGGTGTTGCCAGCTGTTCCTGCATGTCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: SLTERSLSLNSF*VLPAVPACLIF
Trigger: AAAGATAAGACATGCAGGAACAGCTGGCAACACCAAGAAAGAATTTAAGGAGAGGGATCTCTCTGTTAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCAAGAGCCAACTGCTTTaGTCACCACTCAAGACAAGA +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVKSQLL*SPLKTR
Trigger: TCTTGTCTTGAGTGGTGACCAAAGCAGTTGGCTCTT...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCCAAACCCCAGTACAGTaGAACACTTTTATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVQTPVQ*NTFMKA
Trigger: AGCCTTCATAAAAGTGTTTCACTGTACTGGGGTTTG...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR TCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGCTAGTTTTGACTCTCTaGCACCCGTTTGTGATTCTA +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMLVLTL*HPFVIL
Trigger: TAGAATCACAAACGGGTGTCAGAGAGTCAAAACTAG...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCCACCATCTTGACTGTTaGCATCAATATTGGCATGCT +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVHHLDC*HQYWHA
Trigger: AGCATGCCAATATTGATGGCAACAGTCAAGATGGTG...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGCACCATCTTGACTGTTaGCATCAATATTGGCATGCT +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMHHLDC*HQYWHA
Trigger: AGCATGCCAATATTGATGGCAACAGTCAAGATGGTG...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGCTTTTTCTCTCTCCATaGATTACCTCCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMLFLSP*ITSSSL
Trigger: TAGACTGGAGGAGGTAATCCATGGAGAGAGAAAAAG...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR TCA 90 bp TCAAAGATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGACCTTCTGCAGGAAAATaGCCCAAAACATATTATCTA +
Preference number: 4 (lower is better)
Translates to: SKMYSYPFTSGCQNVVLRPSAGK*PKTYYL
Trigger: TAGATAATATGTTTTGGGTCATTTTCCTGCAGAAGG...TCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACATCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp ATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATTTGATGATTCTGCTACCTaGCAAATTTTGAGAACCACC +
Preference number: 4 (lower is better)
Translates to: MYSYPFTSGCQNVVLRLFDDSAT*QILRTT
Trigger: GGTGGTTCTCAAAATTTGGCAGGTAGCAGAATCATC...AAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR GCA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCTACTTCTCTGATAAGTaGCAAGGTCCAGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVYFSDK*QGPASF
Trigger: AAAAGATGCTGGACCTTGGCACTTATCAGAGAAGTA...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR GCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGTCCCTTTGCTATTCTTaGTTTTCGAGTGTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMSLCYS*FSSVRR
Trigger: CCTTCTTACACTCGAAAAGCAAGAATAGCAAAGGGA...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGTTTAATACGAATAAGTaGACAGATGAGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMFNTNK*TDELPS
Trigger: ACTGGGCAGCTCATCTGTCCACTTATTCGTATTAAA...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGATAAAATCCCCTACCTaGCTCTTCTATACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMIKSPT*LFYTSL
Trigger: CAGAGAAGTATAGAAGAGCCAGGTAGGGGATTTTAT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CCA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGAGTACTGCCCACTTCTaGTGTAGTATCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMSTAHF*CSILSL
Trigger: TAAACTCAAGATACTACACCAGAAGTGGGCAGTACT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR GCA 90 bp ATGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATTTACCTCTAGTGGCTACTaGCTCAAAGATGTATTCATA +
Preference number: 4 (lower is better)
Translates to: MYSYPFTSGCQNVVLRLFTSSGY*LKDVFI
Trigger: TATGAATACATCTTTGAGGCAGTAGCCACTAGAGGT...AAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CCA 90 bp TGTATTCATACCCTTTCACCAGTGGTTGTCAAAATGTGGTCCTCAGATTATTTGGTGGTTGTCAAAATGTaGTCCTCAGATTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: CIHTLSPVVVKMWSSDYLVVVKM*SSDYLH
Trigger: ATGCAAATAATCTGAGGACCACATTTTGACAACCAC...CAAATAATCTGAGGACCACATTTTGACAACCACTGGTGAAAGGGTATGAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGGCAGAAACACGTGTTaGTGGAGAGGCGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPGRNTC*WRGGWA
Trigger: GGCCCAGCCGCCTCTCCACAAACACGTGTTTCTGCC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGGGAAGGATTCACCCTaGCTTCAGAAGCTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: ILCPRITWECLWWVHTHGGKDSP*LQKLLA
Trigger: TGCAAGGAGCTTCTGAAGCAAGGGTGAATCCTTCCC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGCAGGTGCCACTGGCCTaGTGGCCACTCCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SHVLPSLPSTKVLISVFMQVPLA*WPLLLF
Trigger: GAACAAGAGGAGTGGCCACAAGGCCAGTGGCACCTG...CATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCCAGGTGCCACTGGCCTaGTGGCCACTCCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPQVPLA*WPLLLF
Trigger: GAACAAGAGGAGTGGCCACAAGGCCAGTGGCACCTG...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTATTAACCTGAGCCCCTaGAAGGCCAACTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: ILCPRITWECLWWVHTHGINLSP*KANFSH
Trigger: GTGTGAGAAGTTGGCCTTCAAGGGGCTCAGGTTAAT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGAAAAGGATTGGGGATaGGTTGGGCTGCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPEKDWG*VGLLSH
Trigger: GTGGGAGAGCAGCCCAACCAATCCCCAATCCTTTTC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTTTCAGAAGAAAAGGATaGGGGATTGGTTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: ILCPRITWECLWWVHTHGFRRKG*GIGWAA
Trigger: AGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGAA...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTCCCCTTTCTGTTTTATaGAGCCATATGAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ILCPRITWECLWWVHTHGPLSVL*SHMRLQ
Trigger: CTGCAGCCTCATATGGCTCAATAAAACAGAAAGGGG...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGGCAGAAACACGTGTTaGTGGAGAGGCGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QHFGENARHTNSLHLGAVGRNTC*WRGGWA
Trigger: GGCCCAGCCGCCTCTCCACAAACACGTGTTTCTGCC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAAGGATTGGGGATTGGTaGGGCTGCTCTCCCACCTTT +
Preference number: 5 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSRIGDW*GCSPTF
Trigger: AAAGGTGGGAGAGCAGCCCAACCAATCCCCAATCCT...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTGTAAGAAGGGTTCCTTaGCAAGATTTCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ILCPRITWECLWWVHTHGVRRVP*QDFISA
Trigger: GGCAGAGATGAAATCTTGCAAAGGAACCCTTCTTAC...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAGGATGAGCAGCACTTaGGTGAAAATGCTAGACACA +
Preference number: 5 (lower is better)
Translates to: ILCPRITWECLWWVHTHGRMSST*VKMLDT
Trigger: TGTGTCTAGCATTTTCACCAAAGTGCTGCTCATCCT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATCCTCTGCCCCCGCATCACCTGGGAATGCCTGTGGTGGGTACATACCCATGGTAATTCTTTCTTGGTGTaGCCAGCTGTTCCTGCATGT +
Preference number: 5 (lower is better)
Translates to: ILCPRITWECLWWVHTHGNSFLV*PAVPAC
Trigger: ACATGCAGGAACAGCTGGCAACACCAAGAAAGAATT...ACCATGGGTATGTACCCACCACAGGCATTCCCAGGTGATGCGGGGGCAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATGCTTCAGAAGCTCCTaGCAATCAGGGACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSCFRSS*QSGTRV
Trigger: TACCCTGGTCCCTGATTGCAAGGAGCTTCTGAAGCA...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTTGCTTCAGAAGCTCCTaGCAATCAGGGACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: QHFGENARHTNSLHLGAVCFRSS*QSGTRV
Trigger: TACCCTGGTCCCTGATTGCAAGGAGCTTCTGAAGCA...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGAAAAGGATTGGGGATaGGTTGGGCTGCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: TALPETAAIIVIKHFMLLEKDWG*VGLLSH
Trigger: GTGGGAGAGCAGCCCAACCAATCCCCAATCCTTTTC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCCCAAACTTTTAGGATaGGGCCTCCTCAGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: TALPETAAIIVIKHFMLLPKLLG*GLLRAL
Trigger: CAAGGCCCTGAGGAGGCCCAATCCTAAAAGTTTGGG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGTCCCTTTGCTATTCTaGCTTTTCGAGTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPVPLLF*LFECKK
Trigger: CTTCTTACACTCGAAAAGCAAGAATAGCAAAGGGAC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTCTGTTGCCATCAATATaGGCATGCTCTACCTCCCAT +
Preference number: 5 (lower is better)
Translates to: QHFGENARHTNSLHLGAVLLPSI*ACSTSH
Trigger: ATGGGAGGTAGAGCATGCCAATATTGATGGCAACAG...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCTCTCATCACACCATCTaGACTGTTGCCATCAATATT +
Preference number: 5 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPSHHTI*TVAINI
Trigger: AATATTGATGGCAACAGTCAAGATGGTGTGATGAGA...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTCTCCTCAACATCTGTCGGTTTCTTGCTTCAGCACCCATGTGGAGGCTCACCCGACTCTGGATTCTCATaGTCTGATCTCTGTATCTAT +
Preference number: 5 (lower is better)
Translates to: FSSTSVGFLLQHPCGGSPDSGFS*SDLCIY
Trigger: ATAGATACAGAGATCAGACAATGAGAATCCAGAGTC...GGGTGAGCCTCCACATGGGTGCTGAAGCAAGAAACCGACAGATGTTGAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTTCAGAAGAAAAGGATaGGGGATTGGTTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: TALPETAAIIVIKHFMLLFRRKG*GIGWAA
Trigger: AGCAGCCCAACCAATCCCCAATCCTTTTCTTCTGAA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATCTCATCACACCATCTaGACTGTTGCCATCAATATT +
Preference number: 5 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSSHHTI*TVAINI
Trigger: AATATTGATGGCAACAGTCAAGATGGTGTGATGAGA...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGCCCCTTTCTGTTTTATaGAGCCATATGAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TALPETAAIIVIKHFMLLPLSVL*SHMRLQ
Trigger: CTGCAGCCTCATATGGCTCAATAAAACAGAAAGGGG...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAGACTCTGGATTCTCATaGTCTGATCTCTGTATCTAT +
Preference number: 5 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSDSGFS*SDLCIY
Trigger: ATAGATACAGAGATCAGACAATGAGAATCCAGAGTC...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp CAGTTTTCATGGGTCCATGGAGGGCTGCCTCTAGTGATGAGCTGGAATCTTAAGTGGTCCTCAGATTATTaGCATCAGCATTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: QFSWVHGGLPLVMSWNLKWSSDY*HQHYLG
Trigger: TCCCAAATAATGCTGATGCAAATAATCTGAGGACCA...CTTAAGATTCCAGCTCATCACTAGAGGCAGCCCTCCATGGACCCATGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGAGGATTGGGGATTGGTaGGGCTGCTCTCCCACCTTT +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMRIGDW*GCSPTF
Trigger: AAAGGTGGGAGAGCAGCCCAACCAATCCCCAATCCT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGCCCAAACTTTTAGGATaGGGCCTCCTCAGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMPKLLG*GLLRAL
Trigger: CAAGGCCCTGAGGAGGCCCAATCCTAAAAGTTTGGG...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCAAGGAGGTCAAGGGCTaGGGTCAAAGTCACCACAGC +
Preference number: 5 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVKEVKG*GQSHHS
Trigger: GCTGTGGTGACTTTGACCCAAGCCCTTGACCTCCTT...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp ATTCCCACGTCCTTCCCTCCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCAGTTTCCTCTAAAATGTaGTTCCTGTTACATGTGTTC +
Preference number: 5 (lower is better)
Translates to: IPTSFPPSLVPRSSSQFSVSSKM*FLLHVF
Trigger: GAACACATGTAACAGGAACAACATTTTAGAGGAAAC...TGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGGAGGGAAGGACGTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGTTGTGGCCACTCCTCTaGTTCACCAAGGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMLWPLL*FTKDAD
Trigger: GTCAGCATCCTTGGTGAACAAGAGGAGTGGCCACAA...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTCCTTAAATTCTTTCTaGGTGTTGCCAGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: TALPETAAIIVIKHFMLLSLNSF*VLPAVP
Trigger: AGGAACAGCTGGCAACACCAAGAAAGAATTTAAGGA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp CTCTATCAATTAATCTTTCCCACATCTGCTTCTAAACCTCTAGTGGCTACTGCCTACAGAAAGCCCAGGTaGGCAGTACTAATTCAGAGT +
Preference number: 5 (lower is better)
Translates to: LYQLIFPTSASKPLVATAYRKPR*AVLIQS
Trigger: ACTCTGAATTAGTACTGCCAACCTGGGCTTTCTGTA...GGCAGTAGCCACTAGAGGTTTAGAAGCAGATGTGGGAAAGATTAATTGATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGGTGTCAGGCTGTGTGTaGTTACAGATTGTATATTTG +
Preference number: 5 (lower is better)
Translates to: TALPETAAIIVIKHFMLLVSGCV*LQIVYL
Trigger: CAAATATACAATCTGTAACAACACACAGCCTGACAC...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGATTAACCTGAGCCCCTaGAAGGCCAACTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMINLSP*KANFSH
Trigger: GTGTGAGAAGTTGGCCTTCAAGGGGCTCAGGTTAAT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp CAGCACTTTGGTGAAAATGCTAGACACACAAACTCCCTCCATCTGGGAGCTGTTGTTTCCTCTAAAATGTaGTTCCTGTTACATGTGTTC +
Preference number: 5 (lower is better)
Translates to: QHFGENARHTNSLHLGAVVSSKM*FLLHVF
Trigger: GAACACATGTAACAGGAACAACATTTTAGAGGAAAC...AACAGCTCCCAGATGGAGGGAGTTTGTGTGTCTAGCATTTTCACCAAAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp ATAATCTATCTACTAGCCCTGCCTGAAATATCAGGGCCACATCTCCTACACAAGAGAATAAAACCTAGGTaGCCACACCTAGATAATGTG +
Preference number: 5 (lower is better)
Translates to: IIYLLALPEISGPHLLHKRIKPR*PHLDNV
Trigger: CACATTATCTAGGTGTGGCAACCTAGGTTTTATTCT...CTTGTGTAGGAGATGTGGCCCTGATATTTCAGGCAGGGCTAGTAGATAGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502852.1
CDS-3UTR CAA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCCTGTTGCCATCAATATaGGCATGCTCTACCTCCCAT +
Preference number: 5 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVLLPSI*ACSTSH
Trigger: ATGGGAGGTAGAGCATGCCAATATTGATGGCAACAG...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp ACCGCCCTTCCTGAAACTGCTGCCATCATAGTCATCAAACACTTCATGTTACTGTTCTGGTGTAGTATCTaGAGTTTAGGGAAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: TALPETAAIIVIKHFMLLFWCSI*SLGKFL
Trigger: CAAAAACTTCCCTAAACTCAAGATACTACACCAGAA...CAGTAACATGAAGTGTTTGATGACTATGATGGCAGCAGTTTCAGGAAGGGCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGTAAGAAGGGTTCCTTaGCAAGATTTCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMVRRVP*QDFISA
Trigger: GGCAGAGATGAAATCTTGCAAAGGAACCCTTCTTAC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCAGGATGAGCAGCACTTaGGTGAAAATGCTAGACACA +
Preference number: 5 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVRMSST*VKMLDT
Trigger: TGTGTCTAGCATTTTCACCAAAGTGCTGCTCATCCT...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGAATTCTTTCTTGGTGTaGCCAGCTGTTCCTGCATGT +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMNSFLV*PAVPAC
Trigger: ACATGCAGGAACAGCTGGCAACACCAAGAAAGAATT...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCGTGTGTTGTTACAGATaGTATATTTGCATGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVVCCYR*YICMPG
Trigger: CCCAGGCATGCAAATATACAATCTGTAACAACACAC...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGTCCCTTTGCTATTCTaGCTTTTCGAGTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMVPLLF*LFECKK
Trigger: CTTCTTACACTCGAAAAGCAAGAATAGCAAAGGGAC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGTCCTTAAATTCTTTCTaGGTGTTGCCAGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMSLNSF*VLPAVP
Trigger: AGGAACAGCTGGCAACACCAAGAAAGAATTTAAGGA...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TTTCTCTCTCCATGGATTACCTCCTCCAGTCTATGTTTTTATACCACCTTTATGGTGTCAGGCTGTGTGTaGTTACAGATTGTATATTTG +
Preference number: 5 (lower is better)
Translates to: FLSPWITSSSLCFYTTFMVSGCV*LQIVYL
Trigger: CAAATATACAATCTGTAACAACACACAGCCTGACAC...CATAAAGGTGGTATAAAAACATAGACTGGAGGAGGTAATCCATGGAGAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521288.2
ENST00000537561.5
CDS-3UTR CAA 90 bp TCATCTGGTATCATGTATCATCTCTCAGATCCAATAAGAAAACATTCCCACGTCTTCTGGTGTAGTATCTaGAGTTTAGGGAAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: SSGIMYHLSDPIRKHSHVFWCSI*SLGKFL
Trigger: CAAAAACTTCCCTAAACTCAAGATACTACACCAGAA...GACGTGGGAATGTTTTCTTATTGGATCTGAGAGATGATACATGATACCAGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521288.2
CDS CCA 72 bp CCCTCCCTAGTACCAAGGTCCTCATCTCAGTTTTCATaGGTCCATGGAGGGCTGCTTCAAGTAACTGCTCCC +
Preference number: 6 (lower is better)
Translates to: PSLVPRSSSQFS*VHGGLLQVTAP
Trigger: GGGAGCAGTTACTTGAAGCAGCCCTCCATGGACCCATGAAAACTGAGATGAGGACCTTGGTACTAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537561.5
CDS CAA 72 bp GTAAAGGGTGGGAAAGACCTTTACAGAAAGCCCAGGTaGGCAGTACTAATTCAGAGTATAGATGATCACGAT +
Preference number: 6 (lower is better)
Translates to: VKGGKDLYRKPR*AVLIQSIDDHD
Trigger: ATCGTGATCATCTATACTCTGAATTAGTACTGCCAACCTGGGCTTTCTGTAAAGGTCTTTCCCACCCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502852.1