RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NTRK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148053

Ensembl transcript IDs: ENST00000277120.8, ENST00000304053.10, ENST00000323115.10, ENST00000359847.4, ENST00000376208.6, ENST00000376213.6, ENST00000395882.6

Found 2269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTCCCATTCCTGTGGGACACAGTTGGCTGCGGCTGGGGACAGTaGCCCCTCTGGAAGGGCAGGCATCGGCTCACACAGATCATTCTG +
Preference number: 1 (lower is better)
Translates to: RLPFLWDTVGCGWGQ*PLWKGRHRLTQIIL
Trigger: CAGAATGATCTGTGTGAGCCGATGCCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGAATGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp GGATGTCTCTGGCCACACGGGAGTAGGACCAACCAGGGAATGGGTTaGGGGGAGACATTGGTGCAGAATTCCCAGCAAAGGGAGACAGCT +
Preference number: 1 (lower is better)
Translates to: GCLWPHGSRTNQGMG*GETLVQNSQQRETA
Trigger: AGCTGTCTCCCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCCTACTCCCGTGTGGCCAGAGACATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 90 bp ACGGGAGTAGGACCAACCAGGGAATGGGTTGAGGGGAGACATTGGTaGAGAATTCCCAGCAAAGGGAGACAGCTGAGGGTCACAGCATGG +
Preference number: 1 (lower is better)
Translates to: TGVGPTREWVEGRHW*RIPSKGRQLRVTAW
Trigger: CCATGCTGTGACCCTCAGCTGTCTCCCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCCTACTCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp CACACGGGAGTAGGACCAACCAGGGAATGGGTTGAGGGGAGACATTaGTGCAGAATTCCCAGCAAAGGGAGACAGCTGAGGGTCACAGCA +
Preference number: 1 (lower is better)
Translates to: HTGVGPTREWVEGRH*CRIPSKGRQLRVTA
Trigger: TGCTGTGACCCTCAGCTGTCTCCCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCCTACTCCCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp CCAGCGCATAACACAGGCCTCATGTGCTCTGTGATACTTACCATATaGGAGTCTGACGTGGCCAGCTATGGCCAGACCCCCGCTCTTAAC +
Preference number: 1 (lower is better)
Translates to: PAHNTGLMCSVILTI*ESDVASYGQTPALN
Trigger: GTTAAGAGCGGGGGTCTGGCCATAGCTGGCCACGTCAGACTCTCATATGGTAAGTATCACAGAGCACATGAGGCCTGTGTTATGCGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp AGAGGGGGAAGGAATTGTATTGGGACCTGCAGAACAGCAGCAATGTaGCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCA +
Preference number: 1 (lower is better)
Translates to: RGGRNCIGTCRTAAM*HEGSHEMSRQPSVP
Trigger: TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCTGTTCTGCAGGTCCCAATACAATTCCTTCCCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp TGGGGACATAGACTAGATGTGACTGGCCCTGCCCATGTGGCTGGATaGACCAACCCTGAGAGACCCTATGCTAGATGGAATTGCTTGTCC +
Preference number: 1 (lower is better)
Translates to: WGHRLDVTGPAHVAG*TNPERPYARWNCLS
Trigger: GGACAAGCAATTCCATCTAGCATAGGGTCTCTCAGGGTTGGTGCATCCAGCCACATGGGCAGGGCCAGTCACATCTAGTCTATGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp GCCCATGTGGCTGGATGCACCAACCCTGAGAGACCCTATGCTAGATaGAATTGCTTGTCCTCAGTCCAGCTGTCCCTCTGTATCTGGAGT +
Preference number: 1 (lower is better)
Translates to: AHVAGCTNPERPYAR*NCLSSVQLSLCIWS
Trigger: ACTCCAGATACAGAGGGACAGCTGGACTGAGGACAAGCAATTCCATCTAGCATAGGGTCTCTCAGGGTTGGTGCATCCAGCCACATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp GGTTTTCTGTCTTCAGCTCTTCGAGCTATTTACTCCACACACCCCTaGAGAGGTGTCGCCTCTGCTCTGTCTGAGGAGATGCTCCAAGCC +
Preference number: 1 (lower is better)
Translates to: GFLSSALRAIYSTHP*RGVASALSEEMLQA
Trigger: GGCTTGGAGCATCTCCTCAGACAGAGCAGAGGCGACACCTCTTCAGGGGTGTGTGGAGTAAATAGCTCGAAGAGCTGAAGACAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp CACATGCAAGAGTGGCCAATCCGAAACCAAAATGGGGGCGTAGCTTaGTTGGATTCATCCTGTTGGTACACACACTCCAGTCAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: HMQEWPIRNQNGGVA*LDSSCWYTHSSQAG
Trigger: CCCAGCCTGACTGGAGTGTGTGTACCAACAGGATGAATCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATTGGCCACTCTTGCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp TCTCTCAGTCTCAGAGGGCAGTGGCTCTTGCTTCCAGTTAGGGGCTaGGTCCAAGGAGAGAGATTCCTTTATGTGGCAACCAGGTTGAAC +
Preference number: 1 (lower is better)
Translates to: SLSLRGQWLLLPVRG*VQGERFLYVATRLN
Trigger: GTTCAACCTGGTTGCCACATAAAGGAATCTCTCTCCTTGGACTCAGCCCCTAACTGGAAGCAAGAGCCACTGCCCTCTGAGACTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp CCAAGCCTCAGCCATTCTGGGCCTAATTCAGGGTTACTTGGAGAGTaGGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTGCTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: PSLSHSGPNSGLLGE*EAKSKLLCSVLLGG
Trigger: CCCACCCAGCAACACAGAACACAGGAGTTTGCTTTTGGCTTCTCACTCTCCAAGTAACCCTGAATTAGGCCCAGAATGGCTGAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 90 bp GTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTaGTCATCATTGGCCTTCAAGCCACTGGGCTGCCAACATTCCAAT +
Preference number: 1 (lower is better)
Translates to: VGIPKSCSSRCGVLD*SSLAFKPLGCQHSN
Trigger: ATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp AGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTaGACTGCTCATCATTGGCCTTCAAGCCACTGGGCTGCCAACATT +
Preference number: 1 (lower is better)
Translates to: RMWEFLRVAHLAVGS*TAHHWPSSHWAANI
Trigger: AATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTaGCTGTTGAGGGGAGCAGAATGGGTGCCTTGTGTGATAGCTTTA +
Preference number: 1 (lower is better)
Translates to: LQPFPLLVRQGRSGL*LLRGAEWVPCVIAL
Trigger: TAAAGCTATCACACAAGGCACCCATTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp ATATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTaGGCTGTGGCTGTTGAGGGGAGCAGAATGGGTGCCTTGTGTGAT +
Preference number: 1 (lower is better)
Translates to: ISPPAFPLIGKTRTK*AVAVEGSRMGALCD
Trigger: ATCACACAAGGCACCCATTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp GGGAAGGAATTGTATTGGGACCTGCAGAACAGCAGCAATGTGCCATaGAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCATAAAA +
Preference number: 1 (lower is better)
Translates to: GKELYWDLQNSSNVP*RLPRDESSTQCAIK
Trigger: TTTTATGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCTGTTCTGCAGGTCCCAATACAATTCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp GAGCTCTCAGCCTGCCTTGTCAGAACAAGAGAGCCTCTCATTTCCTaGGTCTTTCCAGCGCATAACACAGGCCTCATGTGCTCTGTGATA +
Preference number: 1 (lower is better)
Translates to: ELSACLVRTREPLIS*VFPAHNTGLMCSVI
Trigger: TATCACAGAGCACATGAGGCCTGTGTTATGCGCTGGAAAGACTCAGGAAATGAGAGGCTCTCTTGTTCTGACAAGGCAGGCTGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp GAGAAAGCGGGCTTCCCTCCATTATGCTCTCTCTCGCACCTGGCGTaGAACTGGTTTTCTGTCTTCAGCTCTTCGAGCTATTTACTCCAC +
Preference number: 1 (lower is better)
Translates to: EKAGFPPLCSLSHLA*NWFSVFSSSSYLLH
Trigger: GTGGAGTAAATAGCTCGAAGAGCTGAAGACAGAAAACCAGTTTCACGCCAGGTGCGAGAGAGAGCATAATGGAGGGAAGCCCGCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp GGAGAGAGAAAGCGGGCTTCCCTCCATTATGCTCTCTCTCGCACCTaGCGTGAAACTGGTTTTCTGTCTTCAGCTCTTCGAGCTATTTAC +
Preference number: 1 (lower is better)
Translates to: GERKRASLHYALSRT*RETGFLSSALRAIY
Trigger: GTAAATAGCTCGAAGAGCTGAAGACAGAAAACCAGTTTCACGCCAGGTGCGAGAGAGAGCATAATGGAGGGAAGCCCGCTTTCTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp GAAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTaGGAGTTCTGTCAGCCAAATTCAGTCTGGCAGCACCTGGCAGCA +
Preference number: 1 (lower is better)
Translates to: EISFCDSHCHGTFLG*EFCQPNSVWQHLAA
Trigger: TGCTGCCAGGTGCTGCCAGACTGAATTTGGCTGACAGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp AGTGGGAAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTaGGCTGGGAGTTCTGTCAGCCAAATTCAGTCTGGCAGCACCTGG +
Preference number: 1 (lower is better)
Translates to: SGKFPSATVIVMELS*AGSSVSQIQSGSTW
Trigger: CCAGGTGCTGCCAGACTGAATTTGGCTGACAGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTTCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp TTTCCTGAGTCTTTCCAGCGCATAACACAGGCCTCATGTGCTCTGTaGTACTTACCATATGAGAGTCTGACGTGGCCAGCTATGGCCAGA +
Preference number: 1 (lower is better)
Translates to: FPESFQRITQASCAL*YLPYESLTWPAMAR
Trigger: TCTGGCCATAGCTGGCCACGTCAGACTCTCATATGGTAAGTATCACAGAGCACATGAGGCCTGTGTTATGCGCTGGAAAGACTCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp AAAGCTGGGAGTGACCAAAAGGAGACTCCAGCTATCAGAGGTCCTTaGACAGCCAAGGTATCCTTGATGGAAGTGAAGGCATCCCTAAAC +
Preference number: 1 (lower is better)
Translates to: KAGSDQKETPAIRGP*TAKVSLMEVKASLN
Trigger: GTTTAGGGATGCCTTCACTTCCATCAAGGATACCTTGGCTGTGCAAGGACCTCTGATAGCTGGAGTCTCCTTTTGGTCACTCCCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp CATACACGTGGGCAAGCCCTGGAGTTTCTGAACATAGGAAGAGAATaGAAGTCATGTGTTAGGTCCGCTCCCTTGCATGAAATGTGGGAG +
Preference number: 1 (lower is better)
Translates to: HTRGQALEFLNIGRE*KSCVRSAPLHEMWE
Trigger: CTCCCACATTTCATGCAAGGGAGCGGACCTAACACATGACTTGCATTCTCTTCCTATGTTCAGAAACTCCAGGGCTTGCCCACGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp GATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGAGTaGCCAAAAGGAGACTCCAGCTATCAGAGGTCCTTGCACAGCCAA +
Preference number: 1 (lower is better)
Translates to: DHWTANSIKFKQSWE*PKGDSSYQRSLHSQ
Trigger: TTGGCTGTGCAAGGACCTCTGATAGCTGGAGTCTCCTTTTGGTCACTCCCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp TGGGGTGGGGATAGCCAAACCTCTCTTCAGGACAAGCATACTGCCTaGCACAGACTGAACAGAGCATACAAAGGTCACTGTGATGCTAAA +
Preference number: 1 (lower is better)
Translates to: WGGDSQTSLQDKHTA*HRLNRAYKGHCDAK
Trigger: TTTAGCATCACAGTGACCTTTGTATGCTCTGTTCAGTCTGTGTCAGGCAGTATGCTTGTCCTGAAGAGAGGTTTGGCTATCCCCACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 90 bp TCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTaGTCTCTACTGCACGCTATCATTTCTGGTGATGGGAAAAGAATC +
Preference number: 1 (lower is better)
Translates to: SEHTMRHLVSHGSHL*SLLHAIISGDGKRI
Trigger: GATTCTTTTCCCATCACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 90 bp CTATCATCACAACCTACGAAGACAAAACTGTGTCCGAGCACACTATaGGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGC +
Preference number: 1 (lower is better)
Translates to: LSSQPTKTKLCPSTL*AILCLTEAIFALYC
Trigger: GCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGTCTTCGTAGGTTGTGATGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATaGAGGCTTCATATAGTACAGCCTCCAAACACCGCCCACATCTAC +
Preference number: 1 (lower is better)
Translates to: ELPLHWCSPITAHSI*RLHIVQPPNTAHIY
Trigger: GTAGATGTGGGCGGTGTTTGGAGGCTGTACTATATGAAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp CTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGCTCATCATTaGCCTTCAAGCCACTGGGCTGCCAACATTCCAATTTATATTTGG +
Preference number: 1 (lower is better)
Translates to: LRVAHLAVGSWTAHH*PSSHWAANIPIYIW
Trigger: CCAAATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 90 bp TACTTTACATGCCTCTGCCACAGGGAGTTACTAGCCCTAGGCACATaGAGAGGGCATGCTCTGCAAGTACAAACACATCCAGGTACATAT +
Preference number: 1 (lower is better)
Translates to: YFTCLCHRELLALGT*RGHALQVQTHPGTY
Trigger: ATATGTACCTGGATGTGTTTGTACTTGCAGAGCATGCCCTCTTCATGTGCCTAGGGCTAGTAACTCCCTGTGGCAGAGGCATGTAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp TCCAATCCAGCTATGGCGTCTGTGTGCATGTCTAACTGTCAGAGCTaGTTGTGTTTTCAAACAAAATGCTGCAGGCCTGGCTCTGAAGTC +
Preference number: 1 (lower is better)
Translates to: SNPAMASVCMSNCQS*LCFQTKCCRPGSEV
Trigger: GACTTCAGAGCCAGGCCTGCAGCATTTTGTTTGAAAACACAATCAGCTCTGACAGTTAGACATGCACACAGACGCCATAGCTGGATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 90 bp CTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTaGACGCTATCATTTCTGGTGATGGGAAAAGAATCATCCATGGCA +
Preference number: 1 (lower is better)
Translates to: LCAILCLTEAIFALY*TLSFLVMGKESSMA
Trigger: TGCCATGGATGATTCTTTTCCCATCACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 90 bp CCTCTGCCACAGGGAGTTACTAGCCCTAGGCACATGAAGAGGGCATaGTCTGCAAGTACAAACACATCCAGGTACATATTTAGAGACAAT +
Preference number: 1 (lower is better)
Translates to: PLPQGVTSPRHMKRA*SASTNTSRYIFRDN
Trigger: ATTGTCTCTAAATATGTACCTGGATGTGTTTGTACTTGCAGAGCATGCCCTCTTCATGTGCCTAGGGCTAGTAACTCCCTGTGGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp CCTAATGCTCGTGCTGGGCAGAATGGACTTAGCTTATTTTTAAAGTaGAGGCCATGGCCTTCCAAGGCATACAAACAACTCCCAAAGCAG +
Preference number: 1 (lower is better)
Translates to: PNARAGQNGLSLFLK*RPWPSKAYKQLPKQ
Trigger: CTGCTTTGGGAGTTGTTTGTATGCCTTGGAAGGCCATGGCCTGCACTTTAAAAATAAGCTAAGTCCATTCTGCCCAGCACGAGCATTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp TACTTGGAGAGTGAGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTaGTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTA +
Preference number: 1 (lower is better)
Translates to: YLESEKPKANSCVLC*WVGLGLFSSCPCYL
Trigger: TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAACACAGGAGTTTGCTTTTGGCTTCTCACTCTCCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp GTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGAGGGGAGCAGAATaGGTGCCTTGTGTGATAGCTTTAGCTAATGTTAAAATACTCCCT +
Preference number: 1 (lower is better)
Translates to: VRQGRSGLWLLRGAE*VPCVIALANVKILP
Trigger: AGGGAGTATTTTAACATTAGCTAAAGCTATCACACAAGGCACCCATTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp CACAATCTACTAGCACATGCAAGAGTGGCCAATCCGAAACCAAAATaGGGGCGTAGCTTGATTGGATTCATCCTGTTGGTACACACACTC +
Preference number: 1 (lower is better)
Translates to: HNLLAHARVANPKPK*GRSLIGFILLVHTL
Trigger: GAGTGTGTGTACCAACAGGATGAATCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATTGGCCACTCTTGCATGTGCTAGTAGATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp GGACTGACTTTAGTGGGAAATTTCCTTCTGCGACAGTCATTGTCATaGAACTTTCCTGGGCTGGGAGTTCTGTCAGCCAAATTCAGTCTG +
Preference number: 1 (lower is better)
Translates to: GLTLVGNFLLRQSLS*NFPGLGVLSAKFSL
Trigger: CAGACTGAATTTGGCTGACAGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTTCCCACTAAAGTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 90 bp AGGCCAGTAGTCTTTTTACTCCTCAGAAAGGTCCTCAGGGGAAGGTaGCGAATACATTCTTCCCAGCTAACAGTTGCTGAGTATTTCCTA +
Preference number: 1 (lower is better)
Translates to: RPVVFLLLRKVLRGR*RIHSSQLTVAEYFL
Trigger: TAGGAAATACTCAGCAACTGTTAGCTGGGAAGAATGTATTCGGCACCTTCCCCTGAGGACCTTTCTGAGGAGTAAAAAGACTACTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 90 bp TGGAGCAGTAGTGTCTGCACACAAGGTATTAATCGACGAAGACCATaGACAATTTTGCTTGCACAGTTAAAAGGACGGGTGGGCATGGAA +
Preference number: 1 (lower is better)
Translates to: WSSSVCTQGINRRRP*TILLAQLKGRVGME
Trigger: TTCCATGCCCACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATTAATACCTTGTGTGCAGACACTACTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 90 bp TGTGGGGTCTTGGACTGCTCATCATTGGCCTTCAAGCCACTGGGCTaGCAACATTCCAATTTATATTTGGAATGCTTGAACTCTGAACTC +
Preference number: 1 (lower is better)
Translates to: CGVLDCSSLAFKPLG*QHSNLYLECLNSEL
Trigger: GAGTTCAGAGTTCAAGCATTCCAAATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp AGGACAGCATTCTATACTGTTAGTTGGTGCATTCACTCTAGGATGTaGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACT +
Preference number: 1 (lower is better)
Translates to: RTAFYTVSWCIHSRM*EFLRVAHLAVGSWT
Trigger: AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGTATAGAATGCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp AGCTTGATTGGATTCATCCTGTTGGTACACACACTCCAGTCAGGCTaGGCCTTGGGAAATACCCAGAACAAATACATTAGGATCCTCCAT +
Preference number: 1 (lower is better)
Translates to: SLIGFILLVHTLQSG*ALGNTQNKYIRILH
Trigger: ATGGAGGATCCTAATGTATTTGTTCTGGGTATTTCCCAAGGCCCAGCCTGACTGGAGTGTGTGTACCAACAGGATGAATCCAATCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp TTGGAGAGTGAGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTGCTaGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATTT +
Preference number: 1 (lower is better)
Translates to: LESEKPKANSCVLCC*VGLGLFSSCPCYLF
Trigger: AAATAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAACACAGGAGTTTGCTTTTGGCTTCTCACTCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp GAACAAACGACCCAACTCTCATCTCTCATAGGCCAGCATATAACTTaGATGGACGTAAGGTTTATCTTGTCAACTCCCTCGCTTGACTGC +
Preference number: 1 (lower is better)
Translates to: EQTTQLSSLIGQHIT*MDVRFILSTPSLDC
Trigger: GCAGTCAAGCGAGGGAGTTGACAAGATAAACCTTACGTCCATTCAAGTTATATGCTGGCCTATGAGAGATGAGAGTTGGGTCGTTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 90 bp GCTGAGTTTGTAAATTTTACTGGGAAACCACCCCGTGCTGTCAGGTaGTGTGGTGTTCAGACACGTCTAAACGAGCTAGTTGAGTTAAAG +
Preference number: 1 (lower is better)
Translates to: AEFVNFTGKPPRAVR*CGVQTRLNELVELK
Trigger: CTTTAACTCAACTAGCTCGTTTAGACGTGTCTGAACACCACATCACCTGACAGCACGGGGTGGTTTCCCAGTAAAATTTACAAACTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp TCCTCCATCTGCTGGGATGCTTCTAGAACATCACTGATGCTTTGGTaGAATTGGACTGAAATGTCTGATATGTGCAGGATGCAGAACTCC +
Preference number: 1 (lower is better)
Translates to: SSICWDASRTSLMLW*NWTEMSDMCRMQNS
Trigger: GGAGTTCTGCATCCTGCACATATCAGACATTTCAGTCCAATTTCACCAAAGCATCAGTGATGTTCTAGAAGCATCCCAGCAGATGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp GCAGTTAGTGCCTCTCTATTCCTCAGTAGTAGACTGAAGACCAAATaGCTTGCAAAAGTAAACTCTTTGGGTGTTGCAGGGAAGGGGAGT +
Preference number: 1 (lower is better)
Translates to: AVSASLFLSSRLKTK*LAKVNSLGVAGKGS
Trigger: ACTCCCCTTCCCTGCAACACCCAAAGAGTTTACTTTTGCAAGTCATTTGGTCTTCAGTCTACTACTGAGGAATAGAGAGGCACTAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp ATCTGCTCTACCTATCAGGGAAACGACGTCTGGAGCAGTAGTGTCTaGACACAAGGTATTAATCGACGAAGACCATGCACAATTTTGCTT +
Preference number: 1 (lower is better)
Translates to: ICSTYQGNDVWSSSV*TQGINRRRPCTILL
Trigger: AAGCAAAATTGTGCATGGTCTTCGTCGATTAATACCTTGTGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTGATAGGTAGAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp CATACCTTTTTATGGATCTGCTCTACCTATCAGGGAAACGACGTCTaGAGCAGTAGTGTCTGCACACAAGGTATTAATCGACGAAGACCA +
Preference number: 1 (lower is better)
Translates to: HTFLWICSTYQGNDV*SSSVCTQGINRRRP
Trigger: TGGTCTTCGTCGATTAATACCTTGTGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTGATAGGTAGAGCAGATCCATAAAAAGGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp TGGAGTGAAGGAAACAAAAACAGCATACTGACAATGGAGTACACTTaGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTT +
Preference number: 1 (lower is better)
Translates to: WSEGNKNSILTMEYT*NETTLPTRAQSKGL
Trigger: AAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGTGTACTCCATTGTCAGTATGCTGTTTTTGTTTCCTTCACTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp ACACTGCTTTGTCTTGGAAAGGCAACTTCTTGCTTGGCTAGGTTATaGAAGCTAAGGAGTGACGTCAAGATGTTGTCTGGCCAGAATTTG +
Preference number: 1 (lower is better)
Translates to: TLLCLGKATSCLARL*KLRSDVKMLSGQNL
Trigger: CAAATTCTGGCCAGACAACATCTTGACGTCACTCCTTAGCTTCCATAACCTAGCCAAGCAAGAAGTTGCCTTTCCAAGACAAAGCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp CGTGCTGGGCAGAATGGACTTAGCTTATTTTTAAAGTGCAGGCCATaGCCTTCCAAGGCATACAAACAACTCCCAAAGCAGCCATTATTT +
Preference number: 1 (lower is better)
Translates to: RAGQNGLSLFLKCRP*PSKAYKQLPKQPLF
Trigger: AAATAATGGCTGCTTTGGGAGTTGTTTGTATGCCTTGGAAGGCCATGGCCTGCACTTTAAAAATAAGCTAAGTCCATTCTGCCCAGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp AGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTGCTGGGTGGGGCTaGGATTGTTTAGTTCTTGTCCTTGCTACCTATTTCTGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: RSQKQTPVFCVAGWG*DCLVLVLATYFWKE
Trigger: TTCTTTCCAGAAATAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAACACAGGAGTTTGCTTTTGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp CAGGGAGAAAACCTTCACTTTGTTATAATAGCTGCCGTAAAGGATTaGGCCTCACATCCAAGAAAAACTCCGGTGGTGCCATCTCTACTT +
Preference number: 1 (lower is better)
Translates to: QGENLHFVIIAAVKD*ASHPRKTPVVPSLL
Trigger: AAGTAGAGATGGCACCACCGGAGTTTTTCTTGGATGTGAGGCTCAATCCTTTACGGCAGCTATTATAACAAAGTGAAGGTTTTCTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp CTAAACCTGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTaGAAAGAAATTAGTGTCAGATATAATAGGAGGAAGGATTTGCTA +
Preference number: 1 (lower is better)
Translates to: LNLAAPDWAKRHERC*KEISVRYNRRKDLL
Trigger: TAGCAAATCCTTCCTCCTATTATATCTGACACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCAGGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp ATGGTCTGTCCAAAAGAGTCCTTAATCTTCCCCTATGTCTTTAGATaGACCTGGCATGGTTTGCAGGTACTACAGGCATGTGAACATAGC +
Preference number: 1 (lower is better)
Translates to: MVCPKESLIFPYVFR*TWHGLQVLQACEHS
Trigger: GCTATGTTCACATGCCTGTAGTACCTGCAAACCATGCCAGGTTCATCTAAAGACATAGGGGAAGATTAAGGACTCTTTTGGACAGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 90 bp AAGCTGCATTTCCCAGGGAGAAAACCTTCACTTTGTTATAATAGCTaGCGTAAAGGATTGAGCCTCACATCCAAGAAAAACTCCGGTGGT +
Preference number: 1 (lower is better)
Translates to: KLHFPGRKPSLCYNS*RKGLSLTSKKNSGG
Trigger: ACCACCGGAGTTTTTCTTGGATGTGAGGCTCAATCCTTTACGGCAGCTATTATAACAAAGTGAAGGTTTTCTCCCTGGGAAATGCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTaGTACCTATTTCTGGAAAGAAAACCTAGTGGGTCAGAAATGAAA +
Preference number: 1 (lower is better)
Translates to: VLCCWVGLGLFSSCP*YLFLERKPSGSEMK
Trigger: TTTCATTTCTGACCCACTAGGTTTTCTTTCCAGAAATAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp CAGGGCATGAGAATGATTCACAGGCTGCCTCTGGATTACAGCAAATaGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTA +
Preference number: 1 (lower is better)
Translates to: QGMRMIHRLPLDYSK*LNMKCVKLKDLRFL
Trigger: TAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGCAGCCTGTGAATCATTCTCATGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 90 bp AAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAACTTaGAAATGGACTGACTTTAGTGGGAAATTTCCTTCTGCGACAGTC +
Preference number: 1 (lower is better)
Translates to: KSGGWDVLLSLKTKT*KWTDFSGKFPSATV
Trigger: GACTGTCGCAGAAGGAAATTTCCCACTAAAGTCAGTCCATTTTCAAGTTTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 90 bp GTTGATTTAGGCCTCAACCCTAGGACCCTAGCTAATTTACAAGGCTaGTCTAGGGAAGACAGAATTTTAGGGAGGACATCTATAGTGTTT +
Preference number: 1 (lower is better)
Translates to: VDLGLNPRTLANLQG*SREDRILGRTSIVF
Trigger: AAACACTATAGATGTCCTCCCTAAAATTCTGTCTTCCCTAGAGCAGCCTTGTAAATTAGCTAGGGTCCTAGGGTTGAGGCCTAAATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp AAGAGAAGCATTAATTTAACATGTTTTCTTGAGGTGCTGCTTAGCTaGCTGAGAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCA +
Preference number: 1 (lower is better)
Translates to: KRSINLTCFLEVLLS*LRVTSALVFPNHSS
Trigger: TGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAAACATGTTAAATTAATGCTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp GGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTaGATAGCGCTTGAGAAACAAACCAGTGCTATCATCACAACCTAC +
Preference number: 1 (lower is better)
Translates to: GHESTSFQLKLTKVL*IALEKQTSAIITTY
Trigger: GTAGGTTGTGATGATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp ATTGGACTGAAATGTCTGATATGTGCAGGATGCAGAACTCCATCTTaGTTGGCCGATGATGAGGGAGTAAACACAGTCTTCAGAATATCA +
Preference number: 1 (lower is better)
Translates to: IGLKCLICAGCRTPS*LADDEGVNTVFRIS
Trigger: TGATATTCTGAAGACTGTGTTTACTCCCTCATCATCGGCCAACCAAGATGGAGTTCTGCATCCTGCACATATCAGACATTTCAGTCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp ATAGATAAAGAATTCCAAGCTCCATTGGTCACTCATACATACACGTaGGCAAGCCCTGGAGTTTCTGAACATAGGAAGAGAATGCAAGTC +
Preference number: 1 (lower is better)
Translates to: IDKEFQAPLVTHTYT*ASPGVSEHRKRMQV
Trigger: GACTTGCATTCTCTTCCTATGTTCAGAAACTCCAGGGCTTGCCCACGTGTATGTATGAGTGACCAATGGAGCTTGGAATTCTTTATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 90 bp GAGAAAGAGATAATGCCAAAAAGAAGTCAATACTGTGTCTATGGATaGAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAGTCTTT +
Preference number: 1 (lower is better)
Translates to: EKEIMPKRSQYCVYG*RSTHCFPRELLGVF
Trigger: AAAGACTCCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTATTGACTTCTTTTTGGCATTATCTCTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 90 bp CACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCGCTTaGGAAACAAACCAGTGCTATCATCACAACCTACGAAGACAAAAC +
Preference number: 1 (lower is better)
Translates to: HLFSTEVDKGSVDSA*ETNQCYHHNLRRQN
Trigger: GTTTTGTCTTCGTAGGTTGTGATGATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 90 bp TATTCAAGAACCTTTGACTTGAGCAGCAGTGATTCATTCCAGCCCTaGCAACAAGAAAATACCCCTTCCTGCACTGTCGTTTCTAACTAT +
Preference number: 1 (lower is better)
Translates to: YSRTFDLSSSDSFQP*QQENTPSCTVVSNY
Trigger: ATAGTTAGAAACGACAGTGCAGGAAGGGGTATTTTCTTGTTGTCAGGGCTGGAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 90 bp ATTCACAGGCTGCCTCTGGATTACAGCAAATGGTTGAACATGAAGTaGGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTCTTGTTAC +
Preference number: 1 (lower is better)
Translates to: IHRLPLDYSKWLNMK*VKLKDLRFLGISCY
Trigger: GTAACAAGAGATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGCAGCCTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp AAGAGAGAAAGAGATAATGCCAAAAAGAAGTCAATACTGTGTCTATaGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAGT +
Preference number: 1 (lower is better)
Translates to: KRERDNAKKKSILCL*MKKYTLLPSRASRS
Trigger: ACTCCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTATTGACTTCTTTTTGGCATTATCTCTTTCTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 90 bp ACCCAATGTGCTTCCTACACACTGTGCAGCACAATCTCCCCAAAGTaGGCCATTACTATAGAAATATTAACAGAGTCCAGTACAAACAAA +
Preference number: 1 (lower is better)
Translates to: TQCASYTLCSTISPK*AITIEILTESSTNK
Trigger: TTTGTTTGTACTGGACTCTGTTAATATTTCTATAGTAATGGCTCACTTTGGGGAGATTGTGCTGCACAGTGTGTAGGAAGCACATTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 90 bp GTCACTTTGAAATCAGCCAAGATGCAGTGGGTCTTAGTAAAGCAATaGACCTCAAAACAGATTGCAAAACAAGAACTGGTAAGTATTAGC +
Preference number: 1 (lower is better)
Translates to: VTLKSAKMQWVLVKQ*TSKQIAKQELVSIS
Trigger: GCTAATACTTACCAGTTCTTGTTTTGCAATCTGTTTTGAGGTCCATTGCTTTACTAAGACCCACTGCATCTTGGCTGATTTCAAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 90 bp AGGATATCCACAAGACTAGAAAGCCATATATCCAAACGATATCAGTaGTTAACTCTAACTGGTGGAATTACATGGGACTTTTCGTTTCAT +
Preference number: 1 (lower is better)
Translates to: RISTRLESHISKRYQ*LTLTGGITWDFSFH
Trigger: ATGAAACGAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAACCACTGATATCGTTTGGATATATGGCTTTCTAGTCTTGTGGATATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 90 bp CAAAGGAAGAAAGCACAGGTCTTGTGTAGTATCTTGATTCCATTTTaGAATGGAGGAATAAAAAGTCGTGTGTGTTCTAATTCTGTGAAA +
Preference number: 1 (lower is better)
Translates to: QRKKAQVLCSILIPF*NGGIKSRVCSNSVK
Trigger: TTTCACAGAATTAGAACACACACGACTTTTTATTCCTCCATTGCAAAATGGAATCAAGATACTACACAAGACCTGTGCTTTCTTCCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 90 bp ACTAGAAAGCCATATATCCAAACGATATCAGTGGTTAACTCTAACTaGTGGAATTACATGGGACTTTTCGTTTCATCTTTGTTTCTTATG +
Preference number: 1 (lower is better)
Translates to: TRKPYIQTISVVNSN*WNYMGLFVSSLFLM
Trigger: CATAAGAAACAAAGATGAAACGAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAACCACTGATATCGTTTGGATATATGGCTTTCTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCGGACCTCCCCACATTaGGGGCCAGCTGCCCTTACA +
Preference number: 2 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPRTSPH*GPAALT
Trigger: TGTAAGGGCAGCTGGCCCCCAATGTGGGGAGGTCCG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTGCGGCTGGGGACAGTaGCCCCTCTGGAAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVCGWGQ*PLWKGR
Trigger: CCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATGGGACACAGTTGGCTaGGGCTGGGGACAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLWDTVG*GWGQWP
Trigger: GGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGGACGAAGTGGGCTGTaGCTGTTGAGGGGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRGRSGL*LLRGAE
Trigger: TTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAACAGTTGGCTGCGGCTaGGGACAGTGGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLTVGCG*GQWPLW
Trigger: CCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCTAGCCCTAGGCACATaGAGAGGGCATGCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRLALGT*RGHALQ
Trigger: TTGCAGAGCATGCCCTCTTCATGTGCCTAGGGCTAG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAGCAGCAATGTGCCATaGAGGCTCCCACGAGATGAG +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRSSNVP*RLPRDE
Trigger: CTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGAGGGCAGTGGCTCTTaGTTCCAGTTAGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLEGSGS*FQLGAE
Trigger: CTCAGCCCCTAACTGGAAGCAAGAGCCACTGCCCTC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATGCGGCTGGGGACAGTaGCCCCTCTGGAAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKCGWGQ*PLWKGR
Trigger: CCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTCCTCTCAGCCCGTCTaGGGAGTACGTTGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISSQPV*GVRWEG
Trigger: TCCTTCCCAACGTACTCCTCAGACGGGCTGAGAGGA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCTTGGCTTTCCCACCTaGCCCCGAAATGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLLGFPT*PRNELW
Trigger: CCAGAGCTCATTTCGGGGTCAGGTGGGAAAGCCAAG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCTTGGCTTTCCCACCTaGCCCCGAAATGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLGFPT*PRNELW
Trigger: CCAGAGCTCATTTCGGGGTCAGGTGGGAAAGCCAAG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTGGGAAACCACCCCGTaGTGTCAGGTGATGTGGTGT +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLWETTP*CQVMWC
Trigger: ACACCACATCACCTGACAGCACGGGGTGGTTTCCCA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAGAACAGCAGCAATGTaGCATGAAGGCTCCCACGAG +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRRTAAM*HEGSHE
Trigger: CTCGTGGGAGCCTTCATGGCACATTGCTGCTGTTCT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCACACTTCCAGTGCTTaGTCTGGGCACAGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTHTSSA*SGHSLP
Trigger: CGGGAGGCTGTGCCCAGACCAAGCACTGGAAGTGTG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTCCCCCGAGATTAGCTaGCCAGACATGCAGCGTGAC +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSPEIS*PDMQRD
Trigger: GTCACGCTGCATGTCTGGCCAGCTAATCTCGGGGGA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTATGAGAGTCTGACGTaGCCAGCTATGGCCAGACCC +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPYESLT*PAMARP
Trigger: GGGTCTGGCCATAGCTGGCCACGTCAGACTCTCATA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCAGCATGAGATACTGTaGCCTTCTCACTCGGCAGAC +
Preference number: 2 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTQHEIL*PSHSAD
Trigger: GTCTGCCGAGTGAGAAGGCCACAGTATCTCATGCTG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTGGGTTCGACGTGGATaGGGATTTCCAGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLWVRRG*GFPGFR
Trigger: CCTGAAGCCTGGAAATCCTCATCCACGTCGAACCCA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAATGGGGGCGTAGCTTaGTTGGATTCATCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRNGGVA*LDSSCW
Trigger: CCAACAGGATGAATCCAATCAAGCTACGCCCCCATT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCTGCCTGACACAGACTaGACAGAGCATACAAAGGTC +
Preference number: 2 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPLPDTD*TEHTKV
Trigger: GACCTTTGTATGCTCTGTTCAGTCTGTGTCAGGCAG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGCAAAGGGAGACAGCTaGGGGTCACAGCATGGTGGG +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKAKGDS*GSQHGG
Trigger: CCCACCATGCTGTGACCCTCAGCTGTCTCCCTTTGC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGACCTGCCACCTCTTTaGTGCTGGGGTCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLDLPPL*CWGQDK
Trigger: CTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGGTC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTATTCATTAGCGACCTaGCACCTCTTTGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPYSLAT*HLFAAG
Trigger: CCCAGCAGCAAAGAGGTGGCAGGTCGCTAATGAATA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCACATTGGGGGCCAGCTaGCCTTACATTCAAATGGAG +
Preference number: 2 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPTLGAS*PYIQME
Trigger: CTCCATTTGAATGTAAGGGCAGCTGGCCCCCAATGT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGAGGAGAGCAGCTTGGTaGCCTCCAGCGGCAGTTAAA +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLRRAAW*PPAAVK
Trigger: TTTAACTGCCGCTGGAGGCCACCAAGCTGCTCTCCT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAGGAGAGCAGCTTGGTaGCCTCCAGCGGCAGTTAAA +
Preference number: 2 (lower is better)
Translates to: TLCAILCLTEAIFALYCTRRAAW*PPAAVK
Trigger: TTTAACTGCCGCTGGAGGCCACCAAGCTGCTCTCCT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 90 bp GCACATGCAAGAGTGGCCAATCCGAAACCAAAATGGGGGCGTAGCTaGATTGGATTCATCCTGTTGGTACACACACTCCAGTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: AHARVANPKPKWGRS*IGFILLVHTLQSGW
Trigger: CCAGCCTGACTGGAGTGTGTGTACCAACAGGATGAATCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATTGGCCACTCTTGCATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGGGACTGACACCAGCTaGTCCCAGTGGTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTGTDTS*SQWLSL
Trigger: CAAAGACAACCACTGGGATCAGCTGGTGTCAGTCCC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTTCCTAAGTAGGGACTaGCACCAGCTGATCCCAGTG +
Preference number: 2 (lower is better)
Translates to: TLCAILCLTEAIFALYCTFLSRD*HQLIPV
Trigger: CACTGGGATCAGCTGGTGTCAGTCCCTACTTAGGAA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTCCTAAGTAGGGACTaGCACCAGCTGATCCCAGTG +
Preference number: 2 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIFLSRD*HQLIPV
Trigger: CACTGGGATCAGCTGGTGTCAGTCCCTACTTAGGAA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGAACATGAGTGCATGTaGTGCCCTCAGGGTGAGGTT +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPEHECM*CPQGEV
Trigger: AACCTCACCCTGAGGGCATCACATGCACTCATGTTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCATTTCAGTCCTACCTCTaGCCATCAAAATGGACCATG +
Preference number: 2 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPFQSYL*PSKWTM
Trigger: CATGGTCCATTTTGATGGTCAGAGGTAGGACTGAAA...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGAACCTTTGCCATACTaGGCTCCTGCCTGGCTCACA +
Preference number: 2 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVEPLPY*APAWLT
Trigger: TGTGAGCCAGGCAGGAGCTCAGTATGGCAAAGGTTC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGAACCTTTGCCATACTaGGCTCCTGCCTGGCTCACA +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLEPLPY*APAWLT
Trigger: TGTGAGCCAGGCAGGAGCTCAGTATGGCAAAGGTTC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGTCCTCAGGGGAAGGTaGCGAATACATTCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: TLCAILCLTEAIFALYCTVLRGR*RIHSSQ
Trigger: CTGGGAAGAATGTATTCGGCACCTTCCCCTGAGGAC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTGTCCGAGCACACTATaGGCCATCTTGTGTCTCACG +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPCPSTL*AILCLT
Trigger: CGTGAGACACAAGATGGCGCATAGTGTGCTCGGACA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCCTGTGGGTTCGACGTaGATGAGGATTTCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLPVGST*MRISRL
Trigger: AAGCCTGGAAATCCTCATCCACGTCGAACCCACAGG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGGCACAGCCTCCCGTTaGCATGCTGTGCCAAATTTT +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPGTASR*HAVPNF
Trigger: AAAATTTGGCACAGCATGCCAACGGGAGGCTGTGCC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTGCAGAACTCCATCTTaGTTGGCCGATGATGAGGGA +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLCRTPS*LADDEG
Trigger: TCCCTCATCATCGGCCAACCAAGATGGAGTTCTGCA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCTGTGTTTGCTCAGCTaGTCCTGGTCCACAATCTAC +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPLCLLS*SWSTIY
Trigger: GTAGATTGTGGACCAGGACCAGCTGAGCAAACACAG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGAAGCCCAGCTACGGTaGTTACTCTCACAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWEAQLR*LLSQAG
Trigger: GCCAGCCTGTGAGAGTAACCACCGTAGCTGGGCTTC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTCCCCATTTCCTTCCTaGCCGTGGGTTAGAGAAAGT +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPSPFPS*PWVRES
Trigger: ACTTTCTCTAACCCACGGCCAGGAAGGAAATGGGGA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAGATCCGGGGATCACTaGACAGCAAACTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPRSGDH*TANSIK
Trigger: CTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAAGGGTCACAGCATGGTaGGAATCACAGGAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLRVTAW*ESQERS
Trigger: GCTCCTCTCCTGTGATTCCCACCATGCTGTGACCCT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp GCTGGATGCACCAACCCTGAGAGACCCTATGCTAGATGGAATTGCTaGTCCTCAGTCCAGCTGTCCCTCTGTATCTGGAGTCTAGACAAA +
Preference number: 2 (lower is better)
Translates to: AGCTNPERPYARWNC*SSVQLSLCIWSLDK
Trigger: TTTGTCTAGACTCCAGATACAGAGGGACAGCTGGACTGAGGACAAGCAATTCCATCTAGCATAGGGTCTCTCAGGGTTGGTGCATCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTTGCCATCCTGATTaGTCGAGGAGATGGGTCTAT +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLSCHPD*SRRWVY
Trigger: ATAGACCCATCTCCTCGATCAATCAGGATGGCAAGA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCATCTAAACGAGCTAGTTaGGTTAAAGACCAACTCCAG +
Preference number: 2 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPSKRAS*VKDQLQ
Trigger: CTGGAGTTGGTCTTTAACTCAACTAGCTCGTTTAGA...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGTAATGCAAACAGCATaGGATACTGTGGCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTVMQTA*DTVAFS
Trigger: TGAGAAGGCCACAGTATCTCATGCTGTTTGCATTAC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTACTCCCTCGCTTGACTaGAGTTGCTACTGGATTTCC +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPTPSLD*SCYWIS
Trigger: GGAAATCCAGTAGCAACTGCAGTCAAGCGAGGGAGT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCTGCCCCTTCCTTACTaGGTCACAGAGTTCTACAGT +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLPLPY*VTEFYS
Trigger: ACTGTAGAACTCTGTGACGCAGTAAGGAAGGGGCAG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTTAGCTGGCCAGACATaGAGCGTGACAAACCTGTGT +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLAGQT*SVTNLC
Trigger: ACACAGGTTTGTCACGCTGCATGTCTGGCCAGCTAA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGGAAAGGCAACTTCTTaGTTGGCTAGGTTATGGAAG +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRGKATS*LARLWK
Trigger: CTTCCATAACCTAGCCAAGCAAGAAGTTGCCTTTCC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGTCATTAGAGCACACTaGTTTGTCTTGGAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPVIRAH*FVLERQ
Trigger: TTGCCTTTCCAAGACAAAGCAGTGTGCTCTAATGAC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTACTTTACATGCCTCTaGCACAGGGAGTTACTAGCC +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPYFTCL*HRELLA
Trigger: GGCTAGTAACTCCCTGTGGCAGAGGCATGTAAAGTA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTACTTTACATGCCTCTaGCACAGGGAGTTACTAGCC +
Preference number: 2 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLYFTCL*HRELLA
Trigger: GGCTAGTAACTCCCTGTGGCAGAGGCATGTAAAGTA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAATTGTATTGGGACCTaGAGAACAGCAGCAATGTGC +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRNCIGT*RTAAMC
Trigger: GCACATTGCTGCTGTTCTGCAGGTCCCAATACAATT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCTGATATGTGCAGGATaGAGAACTCCATCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRLICAG*RTPSWL
Trigger: CAACCAAGATGGAGTTCTGCATCCTGCACATATCAG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGAAAAACTCCGGTGGTaGCATCTCTACTTAACCAGA +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQREKLRW*HLYLTR
Trigger: TCTGGTTAAGTAGAGATGGCACCACCGGAGTTTTTC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGACCTGCCACCTCTTTaGTGCTGGGGTCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKDLPPL*CWGQDK
Trigger: CTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGGTC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAAACAAAGGGCAGAATaGATTCATCTCCTCCTCGGG +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPKQRAE*IHLLLG
Trigger: CCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGGAAAACAATTCAGGTaGCTGCTTAGTGGTGCCATC +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPGKQFR*LLSGAI
Trigger: GATGGCACCACTAAGCAGCCACCTGAATTGTTTTCC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCCACCTCTTTGCTGCTaGGGTCAGGACAAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKPPLCC*GQDKLS
Trigger: GGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCCTGTGGGACACAGTTaGCTGCGGCTGGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFPVGHS*LRLGTV
Trigger: CACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp CAACCTACGAAGACAAAACTGTGTCCGAGCACACTATGCGCCATCTaGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCTATCA +
Preference number: 2 (lower is better)
Translates to: QPTKTKLCPSTLCAI*CLTEAIFALYCTLS
Trigger: TGATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGTCTTCGTAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 90 bp CCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTaGAGGGGAGCAGAATGGGTGCCTTGTGTGATAGCTTTAGCTAAT +
Preference number: 2 (lower is better)
Translates to: PFPLLVRQGRSGLWL*RGAEWVPCVIALAN
Trigger: ATTAGCTAAAGCTATCACACAAGGCACCCATTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp GAGATGCTCCAAGCCTCAGCCATTCTGGGCCTAATTCAGGGTTACTaGGAGAGTGAGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTGC +
Preference number: 2 (lower is better)
Translates to: EMLQASAILGLIQGY*ESEKPKANSCVLCC
Trigger: GCAACACAGAACACAGGAGTTTGCTTTTGGCTTCTCACTCTCCAAGTAACCCTGAATTAGGCCCAGAATGGCTGAGGCTTGGAGCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGGGGTCGGAGGGAAGTaGGATCTGAAAAGTTCATTG +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTGVGGK*DLKSSL
Trigger: CAATGAACTTTTCAGATCTCACTTCCCTCCGACCCC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCAGCTGCCCTTGAGCTaGGTTTGTAAATTTTACTGG +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLQLPLS*VCKFYW
Trigger: CCAGTAAAATTTACAAACTCAGCTCAAGGGCAGCTG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCAACACAGCTGCCCTTaGGCTGAGTTTGTAAATTTT +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRQHSCP*AEFVNF
Trigger: AAAATTTACAAACTCAGCTCAAGGGCAGCTGTGTTG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTACCATATGAGAGTCTaGCGTGGCCAGCTATGGCCA +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWYHMRV*RGQLWP
Trigger: TGGCCATAGCTGGCCACGTCAGACTCTCATATGGTA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGCCTCATGTGCTCTGTaGTACTTACCATATGAGAGT +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPASCAL*YLPYES
Trigger: ACTCTCATATGGTAAGTATCACAGAGCACATGAGGC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCCGAGAAGGAAAGTGTaGTTGATTCAGGACATGAGT +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPPRRKV*LIQDMS
Trigger: ACTCATGTCCTGAATCAATCACACTTTCCTTCTCGG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTATGAAGTAGCCAAGTaGAATGCTGCAATCCATAGG +
Preference number: 2 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPYEVAK*NAAIHR
Trigger: CCTATGGATTGCAGCATTTCACTTGGCTACTTCATA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGAAGAGGGCATGCTCTaGAAGTACAAACACATCCAG +
Preference number: 2 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWEEGML*KYKHIQ
Trigger: CTGGATGTGTTTGTACTTGCAGAGCATGCCCTCTTC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAGCTTATTTTTAAAGTaGAGGCCATGGCCTTCCAAG +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRSLFLK*RPWPSK
Trigger: CTTGGAAGGCCATGGCCTGCACTTTAAAAATAAGCT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTTCCTGTGTTCTGTGTTaGTGGGTGGGGCTGGGATTG +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSSCVLC*WVGLGL
Trigger: CAATCCCAGCCCCACCCAGCAACACAGAACACAGGA...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTGGCCTTCAAGCCACTaGGCTGCCAACATTCCAATT +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTWPSSH*AANIPI
Trigger: AATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCGTCAAGATGTTGTCTaGCCAGAATTTGCAGATAAC +
Preference number: 2 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRRQDVV*PEFADN
Trigger: GTTATCTGCAAATTCTGGCCAGACAACATCTTGACG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGTGCTTGGCTAGGTTATaGAAGCTAAGGAGTGACGTC +
Preference number: 2 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWCLARL*KLRSDV
Trigger: GACGTCACTCCTTAGCTTCCATAACCTAGCCAAGCA...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTGCTGTCAGGTGATGTaGTGTTCAGACACGTCTAAA +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLCCQVM*CSDTSK
Trigger: TTTAGACGTGTCTGAACACCACATCACCTGACAGCA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCAAGAAAAACTCCGGTaGTGCCATCTCTACTTAACC +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLQEKLR*CHLYLT
Trigger: GGTTAAGTAGAGATGGCACCACCGGAGTTTTTCTTG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCGGACCTCCCCACATTaGGGGCCAGCTGCCCTTACA +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLRTSPH*GPAALT
Trigger: TGTAAGGGCAGCTGGCCCCCAATGTGGGGAGGTCCG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTCTGAGGGTCACAGCATaGTGGGAATCACAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSLRVTA*WESQER
Trigger: CCTCTCCTGTGATTCCCACCATGCTGTGACCCTCAG...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp CCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGCTCATCATaGGCCTTCAAGCCACTGGGCTGCCAACATTCCAATTTATATTTG +
Preference number: 2 (lower is better)
Translates to: PKSCSSRCGVLDCSS*AFKPLGCQHSNLYL
Trigger: CAAATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTCTGTGGATAGCGCTTaGGAAACAAACCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLSVDSA*ETNQCY
Trigger: ATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTTGGCTTTCCCACCTaGCCCCGAAATGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLGFPT*PRNELW
Trigger: CCAGAGCTCATTTCGGGGTCAGGTGGGAAAGCCAAG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAAAGGCTCCCACGAGATaGGTCGTCAACCCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSKAPTR*VVNPVC
Trigger: GCACACTGGGTTGACGACTCATCTCGTGGGAGCCTT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGATAAAACACACTCCTaGCCTTCAAGAGAACCCAAG +
Preference number: 2 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWDKTHS*PSREPK
Trigger: CTTGGGTTCTCTTGAAGGGCAGGAGTGTGTTTTATC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTCAGAATACTTTACATaGCTCTGCCACAGGGAGTTA +
Preference number: 2 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLSEYFT*LCHREL
Trigger: TAACTCCCTGTGGCAGAGGCATGTAAAGTATTCTGA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAAGACAGAGAAAAGCTaGATTTCCCAGGGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPKTEKS*ISQGEN
Trigger: GTTTTCTCCCTGGGAAATGCAGCTTTTCTCTGTCTT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGAGGGCAGTGGCTCTTaGTTCCAGTTAGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSEGSGS*FQLGAE
Trigger: CTCAGCCCCTAACTGGAAGCAAGAGCCACTGCCCTC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCACAGCTCACAGTATATaGAGGCTTCATATAGTACAG +
Preference number: 2 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPTAHSI*RLHIVQ
Trigger: CTGTACTATATGAAGCCTGCATATACTGTGAGCTGT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATCAGGACAAGCATACTaGCTGACACAGACTGAACAG +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLSGQAY*LTQTEQ
Trigger: CTGTTCAGTCTGTGTCAGGCAGTATGCTTGTCCTGA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATCAAGTCAGCTAAGCTaGGCAACTCCAAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKSSQLS*ATPRAL
Trigger: CAGAGCCCTTGGAGTTGCGCAGCTTAGCTGACTTGA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCCCCCGAGATTAGCTaGCCAGACATGCAGCGTGAC +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSPEIS*PDMQRD
Trigger: GTCACGCTGCATGTCTGGCCAGCTAATCTCGGGGGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCGTCAAGATGTTGTCTaGCCAGAATTTGCAGATAAC +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLRQDVV*PEFADN
Trigger: GTTATCTGCAAATTCTGGCCAGACAACATCTTGACG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTTCCTCAGGCCTAGCTaGCCTATGAATCTGTGCTTA +
Preference number: 2 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGFLRPS*PMNLCL
Trigger: TAAGCACAGATTCATAGGCCAGCTAGGCCTGAGGAA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGGACGAAGTGGGCTGTaGCTGTTGAGGGGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: LLSQAGRISKDREKLHFPGRSGL*LLRGAE
Trigger: TTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGATCTAATGAGCTTCTaGGGTCCTGGATGTAATTCA +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLDLMSF*GPGCNS
Trigger: TGAATTACATCCAGGACCCCAGAAGCTCATTAGATC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATATGAGAGTCTGACGTaGCCAGCTATGGCCAGACCC +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQYESLT*PAMARP
Trigger: GGGTCTGGCCATAGCTGGCCACGTCAGACTCTCATA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGGAGTCCAGCTTACATaGCAGCATCAACCAACAAGC +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKGVQLT*QHQPTS
Trigger: GCTTGTTGGTTGATGCTGCCATGTAAGCTGGACTCC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGAGTTACCTCTGCATTaGTGTTCCCCAATCACAGCT +
Preference number: 2 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVELPLH*CSPITA
Trigger: AGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGCTCTCTCTCGCACCTaGCGTGAAACTGGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSALSRT*RETGFL
Trigger: CAGAAAACCAGTTTCACGCCAGGTGCGAGAGAGAGC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTGGCCCTGCCCATGTaGCTGGATGCACCAACCCTG +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILALPM*LDAPTL
Trigger: CAGGGTTGGTGCATCCAGCCACATGGGCAGGGCCAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp ATTGGATTCATCCTGTTGGTACACACACTCCAGTCAGGCTGGGCCTaGGGAAATACCCAGAACAAATACATTAGGATCCTCCATCTGCTG +
Preference number: 2 (lower is better)
Translates to: IGFILLVHTLQSGWA*GNTQNKYIRILHLL
Trigger: CAGCAGATGGAGGATCCTAATGTATTTGTTCTGGGTATTTCCCAAGGCCCAGCCTGACTGGAGTGTGTGTACCAACAGGATGAATCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp GTTCATTTAGGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATaGGAGAGTGACAGGCCCGATTTCAGCAAAAATGCTACCTCTCCT +
Preference number: 2 (lower is better)
Translates to: VHLGDLPGIEVPEPL*ESDRPDFSKNATSP
Trigger: AGGAGAGGTAGCATTTTTGCTGAAATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCCTAAATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGGGACTGACACCAGCTaGTCCCAGTGGTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGGTDTS*SQWLSL
Trigger: CAAAGACAACCACTGGGATCAGCTGGTGTCAGTCCC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCTGTGGATAGCGCTTaGGAAACAAACCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSVDSA*ETNQCY
Trigger: ATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGAATGAGCTCTGGACATaGATCCACCTCTTTTCAACT +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLNELWT*IHLFST
Trigger: AGTTGAAAAGAGGTGGATTCATGTCCAGAGCTCATT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGGGTTCGACGTGGATaGGGATTTCCAGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHWVRRG*GFPGFR
Trigger: CCTGAAGCCTGGAAATCCTCATCCACGTCGAACCCA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCTAGCCCTAGGCACATaGAGAGGGCATGCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMLALGT*RGHALQ
Trigger: TTGCAGAGCATGCCCTCTTCATGTGCCTAGGGCTAG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAGCAGCAATGTGCCATaGAGGCTCCCACGAGATGAG +
Preference number: 2 (lower is better)
Translates to: RALEGILGEEDNPILLAKSSNVP*RLPRDE
Trigger: CTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCACTGATGCTTTGGTaGAATTGGACTGAAATGTCT +
Preference number: 2 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLSLMLW*NWTEMS
Trigger: AGACATTTCAGTCCAATTTCACCAAAGCATCAGTGA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATACCATATGAGAGTCTaGCGTGGCCAGCTATGGCCA +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQYHMRV*RGQLWP
Trigger: TGGCCATAGCTGGCCACGTCAGACTCTCATATGGTA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGTTAGGAGGAAAACTTaGGAACTGGCGGCATGTTTC +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKVRRKT*ELAACF
Trigger: GAAACATGCCGCCAGTTCTCAAGTTTTCCTCCTAAC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGAATCGACGAAGACCATaGACAATTTTGCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLNRRRP*TILLAQ
Trigger: CTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTGGGAAACCACCCCGTaGTGTCAGGTGATGTGGTGT +
Preference number: 2 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGWETTP*CQVMWC
Trigger: ACACCACATCACCTGACAGCACGGGGTGGTTTCCCA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCAATCTACTAGCACATaGAAGAGTGGCCAATCCGAA +
Preference number: 2 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGQSTST*KSGQSE
Trigger: TTCGGATTGGCCACTCTTGCATGTGCTAGTAGATTG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATTTCAAACAAAATGCTaGAGGCCTGGCTCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLFQTKC*RPGSEV
Trigger: GACTTCAGAGCCAGGCCTGCAGCATTTTGTTTGAAA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGCTATGGCGTCTGTGTaGATGTCTAACTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSAMASV*MSNCQS
Trigger: GCTCTGACAGTTAGACATGCACACAGACGCCATAGC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTCCTGTGTTCTGTGTTaGTGGGTGGGGCTGGGATTG +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFSCVLC*WVGLGL
Trigger: CAATCCCAGCCCCACCCAGCAACACAGAACACAGGA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGCCCATGTGGCTGGATaGACCAACCCTGAGAGACCC +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIAHVAG*TNPERP
Trigger: GGGTCTCTCAGGGTTGGTGCATCCAGCCACATGGGC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAAGGACGGGTGGGCATaGAAGTTAGGGGTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPKDGWA*KLGVGG
Trigger: CCCTCCGACCCCTAACTTCCATGCCCACCCGTCCTT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCACACTTCCAGTGCTTaGTCTGGGCACAGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPHTSSA*SGHSLP
Trigger: CGGGAGGCTGTGCCCAGACCAAGCACTGGAAGTGTG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTGCTTGGCTAGGTTATaGAAGCTAAGGAGTGACGTC +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWCLARL*KLRSDV
Trigger: GACGTCACTCCTTAGCTTCCATAACCTAGCCAAGCA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAAGACAAGGACGAAGTaGGCTGTGGCTGTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMKTRTK*AVAVEG
Trigger: CCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTTGGATTCATCCTGTTaGTACACACACTCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGLDSSC*YTHSSQ
Trigger: CTGACTGGAGTGTGTGTACCAACAGGATGAATCCAA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAGGCATTCCCTAAAGTaGAGACTAGCTGTTTTGATA +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPRHSLK*RLAVLI
Trigger: TATCAAAACAGCTAGTCTCCACTTTAGGGAATGCCT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGAGTTACCTCTGCATTaGTGTTCCCCAATCACAGCT +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKELPLH*CSPITA
Trigger: AGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTTGCTAGGATGTCTCTaGCCACACGGGAGTAGGACC +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLLGCL*PHGSRT
Trigger: GGTCCTACTCCCGTGTGGCCAGAGACATCCTAGCAA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTGGCAGCACCTGACTaGGCCAAGAGACATGAGCGC +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILAAPD*AKRHER
Trigger: GCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAACAGCCAAATTCAGTCTaGCAGCACCTGGCAGCAAAT +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKQPNSV*QHLAAN
Trigger: ATTTGCTGCCAGGTGCTGCCAGACTGAATTTGGCTG...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGGAACTTTCCTGGGCTaGGAGTTCTGTCAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKGTFLG*EFCQPN
Trigger: ATTTGGCTGACAGAACTCCCAGCCCAGGAAAGTTCC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp AGTGTCTGCACACAAGGTATTAATCGACGAAGACCATGCACAATTTaGCTTGCACAGTTAAAAGGACGGGTGGGCATGGAAGTTAGGGGT +
Preference number: 2 (lower is better)
Translates to: SVCTQGINRRRPCTI*LAQLKGRVGMEVRG
Trigger: ACCCCTAACTTCCATGCCCACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATTAATACCTTGTGTGCAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 90 bp AAGGAGACTCCAGCTATCAGAGGTCCTTGCACAGCCAAGGTATCCTaGATGGAAGTGAAGGCATCCCTAAACATCAGGAAATGTATGAGA +
Preference number: 2 (lower is better)
Translates to: KETPAIRGPCTAKVS*MEVKASLNIRKCMR
Trigger: TCTCATACATTTCCTGATGTTTAGGGATGCCTTCACTTCCATCAAGGATACCTTGGCTGTGCAAGGACCTCTGATAGCTGGAGTCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp TGTTTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATaGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTCATAT +
Preference number: 2 (lower is better)
Translates to: CFLEVLLSCLRVTSA*VFPNHSSQYMQASY
Trigger: ATATGAAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTCCTCTCAGCCCGTCTaGGGAGTACGTTGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPSSQPV*GVRWEG
Trigger: TCCTTCCCAACGTACTCCTCAGACGGGCTGAGAGGA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGATGCAGAAGCCAGATTaGTTCAAAAGAAAGGGTAAG +
Preference number: 2 (lower is better)
Translates to: TLCAILCLTEAIFALYCTMQKPD*FKRKGK
Trigger: CTTACCCTTTCTTTTGAATCAATCTGGCTTCTGCAT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGGGACTGACACCAGCTaGTCCCAGTGGTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIGTDTS*SQWLSL
Trigger: CAAAGACAACCACTGGGATCAGCTGGTGTCAGTCCC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCACCTGACCCCGAAATaGGCTCTGGACATGAATCCA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGHLTPK*ALDMNP
Trigger: TGGATTCATGTCCAGAGCTCATTTCGGGGTCAGGTG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTACAACGCAGAGACATTaGTACTCAGCTAATAAACTC +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPTTQRH*YSANKL
Trigger: GAGTTTATTAGCTGAGTATCAATGTCTCTGCGTTGT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGGCCAGCATATAACTTaGATGGACGTAAGGTTTATC +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTGQHIT*MDVRFI
Trigger: GATAAACCTTACGTCCATTCAAGTTATATGCTGGCC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGTAAAGGGGTCACAGTaGGACAGAGACAAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHVKGSQ*DRDKVS
Trigger: GCTCACCTTGTCTCTGTCTCACTGTGACCCCTTTAC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCACTGTGAGTGTGCTTaGAACTGGTTTGCTAACAAA +
Preference number: 2 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGHCECA*NWFANK
Trigger: TTTGTTAGCAAACCAGTTTCAAGCACACTCACAGTG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAATGGGGGCGTAGCTTaGTTGGATTCATCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQNGGVA*LDSSCW
Trigger: CCAACAGGATGAATCCAATCAAGCTACGCCCCCATT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGTGATACTTACCATATaGGAGTCTGACGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQVILTI*ESDVAS
Trigger: GCTGGCCACGTCAGACTCTCATATGGTAAGTATCAC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGTGATGACCCTAAATaGGAGCTCTCAGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQSDDPK*ELSACL
Trigger: AAGGCAGGCTGAGAGCTCTCATTTAGGGTCATCACT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAAGCTTTCCTACCCATaGAAACCCAGCAGTATGACA +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKKLSYP*KPSSMT
Trigger: TGTCATACTGCTGGGTTTTCATGGGTAGGAAAGCTT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAACTGTGATGCTAAAGTaGATGAAACAGGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLTVMLK*MKQVSM
Trigger: CATGGACACCTGTTTCATTCACTTTAGCATCACAGT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGTTAGGAGGAAAACTTaGGAACTGGCGGCATGTTTC +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKVRRKT*ELAACF
Trigger: GAAACATGCCGCCAGTTCTCAAGTTTTCCTCCTAAC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGCCTGGCTCACAGCTTaGATTTCATCTCTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSAWLTA*ISSLFQ
Trigger: CTGAAAGAGAGATGAAATTCAAGCTGTGAGCCAGGC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGGGTTACTTGGAGAGTaGGAAGCCAAAAGCAAACTC +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKGLLGE*EAKSKL
Trigger: GAGTTTGCTTTTGGCTTCTCACTCTCCAAGTAACCC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCTCTCGCACCTGGCGTaGAACTGGTTTTCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLSHLA*NWFSVF
Trigger: GAAGACAGAAAACCAGTTTCACGCCAGGTGCGAGAG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGTCCTCAGGGGAAGGTaGCGAATACATTCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGVLRGR*RIHSSQ
Trigger: CTGGGAAGAATGTATTCGGCACCTTCCCCTGAGGAC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTATCTTTGCTCTCTACTaGACGCTATCATTTCTGGTG +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTIFALY*TLSFLV
Trigger: CACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGAT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGATGCACAATTTTGCTTaGACAGTTAAAAGGACGGGT +
Preference number: 2 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLMHNFA*TVKRTG
Trigger: ACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCAT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAATCGACGAAGACCATaGACAATTTTGCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTNRRRP*TILLAQ
Trigger: CTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAAATGAAATCAGTCCCTaGTGGGAGACTGGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKNEISP*WETGRE
Trigger: TTCTCTCCCAGTCTCCCAGCAGGGACTGATTTCATT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCTCTGTCTGAGGAGATaGTCCAAGCCTCAGCCATTC +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLCLRR*SKPQPF
Trigger: GAATGGCTGAGGCTTGGAGCATCTCCTCAGACAGAG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAGGAGAGCAGCTTGGTaGCCTCCAGCGGCAGTTAAA +
Preference number: 2 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIRRAAW*PPAAVK
Trigger: TTTAACTGCCGCTGGAGGCCACCAAGCTGCTCTCCT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCAGGGAAACGACGTCTaGAGCAGTAGTGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGQGNDV*SSSVCT
Trigger: TGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCCTGTGGGTTCGACGTaGATGAGGATTTCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHPVGST*MRISRL
Trigger: AAGCCTGGAAATCCTCATCCACGTCGAACCCACAGG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATTGAGGGGAGCAGAATaGGTGCCTTGTGTGATAGCT +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQLRGAE*VPCVIA
Trigger: AGCTATCACACAAGGCACCCATTCTGCTCCCCTCAA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGTAATATGTAGGAAGTaGCAGAGCATATACACAATC +
Preference number: 2 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPVICRK*QSIYTI
Trigger: GATTGTGTATATGCTCTGCCACTTCCTACATATTAC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCATTTCTGCTATTAGCTaGCCTCTTTGTAAATCAACA +
Preference number: 2 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPISAIS*PLCKST
Trigger: TGTTGATTTACAAAGAGGCCAGCTAATAGCAGAAAT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp CCCGAAATGAGCTCTGGACATGAATCCACCTCTTTTCAACTGAAGTaGACAAAGGTTCTGTGGATAGCGCTTGAGAAACAAACCAGTGCT +
Preference number: 2 (lower is better)
Translates to: PEMSSGHESTSFQLK*TKVLWIALEKQTSA
Trigger: AGCACTGGTTTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGAGCTCATTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 90 bp TCTTGCTTGGCTAGGTTATGGAAGCTAAGGAGTGACGTCAAGATGTaGTCTGGCCAGAATTTGCAGATAACCATAGAACTCTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SCLARLWKLRSDVKM*SGQNLQITIELFSS
Trigger: GGAGGAGAAGAGTTCTATGGTTATCTGCAAATTCTGGCCAGACAACATCTTGACGTCACTCCTTAGCTTCCATAACCTAGCCAAGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp GGACTGAAATGTCTGATATGTGCAGGATGCAGAACTCCATCTTGGTaGGCCGATGATGAGGGAGTAAACACAGTCTTCAGAATATCACTC +
Preference number: 2 (lower is better)
Translates to: GLKCLICAGCRTPSW*ADDEGVNTVFRISL
Trigger: GAGTGATATTCTGAAGACTGTGTTTACTCCCTCATCATCGGCCAACCAAGATGGAGTTCTGCATCCTGCACATATCAGACATTTCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp CCAGGGAGAAAACCTTCACTTTGTTATAATAGCTGCCGTAAAGGATaGAGCCTCACATCCAAGAAAAACTCCGGTGGTGCCATCTCTACT +
Preference number: 2 (lower is better)
Translates to: PGRKPSLCYNSCRKG*SLTSKKNSGGAIST
Trigger: AGTAGAGATGGCACCACCGGAGTTTTTCTTGGATGTGAGGCTCAATCCTTTACGGCAGCTATTATAACAAAGTGAAGGTTTTCTCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp AACACTAACATATTATTGGATGTCATACTATTGATAGAGGCCTCCTaGCCAGAACCCCAGTCTAGGTCTAGAGGCCTGAGACATCAGGAG +
Preference number: 2 (lower is better)
Translates to: NTNILLDVILLIEAS*PEPQSRSRGLRHQE
Trigger: CTCCTGATGTCTCAGGCCTCTAGACCTAGACTGGGGTTCTGGCAAGGAGGCCTCTATCAATAGTATGACATCCAATAATATGTTAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAACTGGAGTGTCTGCTaGTATAACAAATTACGTTTG +
Preference number: 2 (lower is better)
Translates to: TKLCPSTLCAILCLTEAINWSVC*YNKLRL
Trigger: CAAACGTAATTTGTTATATCAGCAGACACTCCAGTT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGTGATGCCCTCAGGGTaGGGTTTCCTTTCCCTTAGG +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPVMPSG*GFLSLR
Trigger: CCTAAGGGAAAGGAAACCTCACCCTGAGGGCATCAC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGCACTTTTGAATTTTTaGGAATTGGCTTTCAAAGCC +
Preference number: 2 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPALLNF*ELAFKA
Trigger: GGCTTTGAAAGCCAATTCTCAAAAATTCAAAAGTGC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCCAGACATGCAGCGTaGCAAACCTGTGTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGARHAA*QTCVGF
Trigger: AAAACCAACACAGGTTTGTCACGCTGCATGTCTGGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCTTCCAGTTAGGGGCTaGGTCCAAGGAGAGAGATTC +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLPVRG*VQGERF
Trigger: GAATCTCTCTCCTTGGACTCAGCCCCTAACTGGAAG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGCATACTCGGCTCTTTaGAAGGAGCTAGCTAGGGTG +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNAYSAL*KELARV
Trigger: CACCCTAGCTAGCTCCTTTCAAAGAGCCGAGTATGC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGTAATGCAAACAGCATaGGATACTGTGGCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSVMQTA*DTVAFS
Trigger: TGAGAAGGCCACAGTATCTCATGCTGTTTGCATTAC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGACTGTGATGCTAAAGTaGATGAAACAGGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKTVMLK*MKQVSM
Trigger: CATGGACACCTGTTTCATTCACTTTAGCATCACAGT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCTGCCTGACACAGACTaGACAGAGCATACAAAGGTC +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLPDTD*TEHTKV
Trigger: GACCTTTGTATGCTCTGTTCAGTCTGTGTCAGGCAG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTTCTCTTTCAGGGTCATaGTTTCTGCTATTAGCTGGC +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSSLSGS*FLLLAG
Trigger: GCCAGCTAATAGCAGAAATCATGACCCTGAAAGAGA...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAGGAGCAAAGGTAATTaGCATGTTGCAGATAACTGG +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKRSKGN*HVADNW
Trigger: CCAGTTATCTGCAACATGTCAATTACCTTTGCTCCT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATCTGGAGGCCCCCATTaGGCCATGAGTAAATATAAT +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKSGGPH*AMSKYN
Trigger: ATTATATTTACTCATGGCTCAATGGGGGCCTCCAGA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGTCCTCAGGGGAAGGTaGCGAATACATTCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIVLRGR*RIHSSQ
Trigger: CTGGGAAGAATGTATTCGGCACCTTCCCCTGAGGAC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTACCTTTTTATGGATCTaGTCTACCTATCAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTTFLWI*STYQGN
Trigger: GTTTCCCTGATAGGTAGAGCAGATCCATAAAAAGGT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATACTCCCTCGCTTGACTaGAGTTGCTACTGGATTTCC +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHTPSLD*SCYWIS
Trigger: GGAAATCCAGTAGCAACTGCAGTCAAGCGAGGGAGT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTTAGCTGGCCAGACATaGAGCGTGACAAACCTGTGT +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLAGQT*SVTNLC
Trigger: ACACAGGTTTGTCACGCTGCATGTCTGGCCAGCTAA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGATTCAGTCCCAATGGTaGTGGAAGCTAGGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGIQSQW*WKLGWR
Trigger: TCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAAT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGTGGGGTCTTGGACTaGTCATCATTGGCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHCGVLD*SSLAFK
Trigger: CTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGAAGAGGGCATGCTCTaGAAGTACAAACACATCCAG +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQEEGML*KYKHIQ
Trigger: CTGGATGTGTTTGTACTTGCAGAGCATGCCCTCTTC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAGCTTATTTTTAAAGTaGAGGCCATGGCCTTCCAAG +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWSLFLK*RPWPSK
Trigger: CTTGGAAGGCCATGGCCTGCACTTTAAAAATAAGCT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGTCGTCAACCCAGTGTaGCATAAAAGAAGCAATTTT +
Preference number: 2 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGVVNPV*HKRSNF
Trigger: AAAATTGCTTCTTTTATGGCACACTGGGTTGACGAC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCTCTGCAACTGTGTTTaGTCAGCTGGTCCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLCNCV*SAGPGP
Trigger: TGGACCAGGACCAGCTGAGCAAACACAGTTGCAGAG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGCTATCAGAGGTCCTTaGACAGCCAAGGTATCCTTG +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMAIRGP*TAKVSL
Trigger: CAAGGATACCTTGGCTGTGCAAGGACCTCTGATAGC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTGCCACCTCTTTGCTaGTGGGGTCAGGACAAGCTT +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILPPLC*WGQDKL
Trigger: AAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGGCCATACTGAGCTCCTaGCTGGCTCACAGCTTGAAT +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLAILSS*LAHSLN
Trigger: ATTCAAGCTGTGAGCCAGGCAGGAGCTCAGTATGGC...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTCAATACTGTGTCTATaGATGAAGAAGTACACACTG +
Preference number: 2 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISILCL*MKKYTL
Trigger: CAGTGTGTACTTCTTCATCCATAGACACAGTATTGA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTTGAGGGGAGCAGAATaGGTGCCTTGTGTGATAGCT +
Preference number: 2 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGLRGAE*VPCVIA
Trigger: AGCTATCACACAAGGCACCCATTCTGCTCCCCTCAA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAGTCTCAGAGGGCAGTaGCTCTTGCTTCCAGTTAGG +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNSLRGQ*LLLPVR
Trigger: CCTAACTGGAAGCAAGAGCCACTGCCCTCTGAGACT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCACTTGAAGGCATTTTaGGTGAGGAAGACAATCCTA +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWHLKAF*VRKTIL
Trigger: TAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCCACCTCTTTGCTGCTaGGGTCAGGACAAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGPPLCC*GQDKLS
Trigger: GGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTTTTCCAATCCAGCTATaGCGTCTGTGTGCATGTCTA +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSFPIQL*RLCACL
Trigger: TAGACATGCACACAGACGCCATAGCTGGATTGGAAA...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAAGACCCTATGCTAGATaGAATTGCTTGTCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKRPYAR*NCLSSV
Trigger: GACTGAGGACAAGCAATTCCATCTAGCATAGGGTCT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp TCATTGGCCTTCAAGCCACTGGGCTGCCAACATTCCAATTTATATTaGGAATGCTTGAACTCTGAACTCAAGTGTAAAGGGGTCACAGTG +
Preference number: 2 (lower is better)
Translates to: SLAFKPLGCQHSNLY*ECLNSELKCKGVTV
Trigger: CACTGTGACCCCTTTACACTTGAGTTCAGAGTTCAAGCATTCCAAATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 90 bp GGCATGAGAATGATTCACAGGCTGCCTCTGGATTACAGCAAATGGTaGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: GMRMIHRLPLDYSKW*NMKCVKLKDLRFLG
Trigger: TCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGCAGCCTGTGAATCATTCTCATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTTAATACTGTCAGAGTaGAGGAGAGCAGCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLILSE*RRAAWW
Trigger: CCACCAAGCTGCTCTCCTTCACTCTGACAGTATTAA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGCACTTTTGAATTTTTaGGAATTGGCTTTCAAAGCC +
Preference number: 2 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTALLNF*ELAFKA
Trigger: GGCTTTGAAAGCCAATTCTCAAAAATTCAAAAGTGC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGGCCTAGCTGGCCTATaGATCTGTGCTTATTTACAT +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQGLAGL*ICAYLH
Trigger: ATGTAAATAAGCACAGATTCATAGGCCAGCTAGGCC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATACCTCTGCGGTTCTGTaGAAAATATCACCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNTSAVL*KISPPA
Trigger: GGCTGGAGGTGATATTTTTCACAGAACCGCAGAGGT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATTTCAGTCCTACCTCTaGCCATCAAAATGGACCATG +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQFQSYL*PSKWTM
Trigger: CATGGTCCATTTTGATGGTCAGAGGTAGGACTGAAA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTCACTGATGCTTTGGTaGAATTGGACTGAAATGTCT +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWSLMLW*NWTEMS
Trigger: AGACATTTCAGTCCAATTTCACCAAAGCATCAGTGA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGAGCCTCTCATTTCCTaGGTCTTTCCAGCGCATAAC +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNEPLIS*VFPAHN
Trigger: GTTATGCGCTGGAAAGACTCAGGAAATGAGAGGCTC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGACAGAAGGATACCGTaGGAGAACAATGATCATGTT +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSDRRIP*ENNDHV
Trigger: AACATGATCATTGTTCTCTCACGGTATCCTTCTGTC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCCCTATGTCTTTAGATaGACCTGGCATGGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFPYVFR*TWHGLQ
Trigger: CTGCAAACCATGCCAGGTTCATCTAAAGACATAGGG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCTGGGTGCTCACTCATaGACATGCCAAAGCTATACT +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLGAHS*TCQSYT
Trigger: AGTATAGCTTTGGCATGTTCATGAGTGAGCACCCAG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGAAGCACACTTCCAGTaGTTGGTCTGGGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYEAHFQ*LVWAQP
Trigger: AGGCTGTGCCCAGACCAAGCACTGGAAGTGTGCTTC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAATTGTATTGGGACCTaGAGAACAGCAGCAATGTGC +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQNCIGT*RTAAMC
Trigger: GCACATTGCTGCTGTTCTGCAGGTCCCAATACAATT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGAGGTGCTGCTTAGCTaGCTGAGAGTTACCTCTGCA +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIEVLLS*LRVTSA
Trigger: TGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGTATTCATTAGCGACCTaGCACCTCTTTGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLYSLAT*HLFAAG
Trigger: CCCAGCAGCAAAGAGGTGGCAGGTCGCTAATGAATA...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGGCTATGGCGTCTGTGTaGATGTCTAACTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLAMASV*MSNCQS
Trigger: GCTCTGACAGTTAGACATGCACACAGACGCCATAGC...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCTGCTTTTGAGAAACTaGCCCTCTTTAAGGCATGGG +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLLLRN*PSLRHG
Trigger: CCCATGCCTTAAAGAGGGGCAGTTTCTCAAAAGCAG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGGCACAGCCTCCCGTTaGCATGCTGTGCCAAATTTT +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPGTASR*HAVPNF
Trigger: AAAATTTGGCACAGCATGCCAACGGGAGGCTGTGCC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTTCCTCAGGCCTAGCTaGCCTATGAATCTGTGCTTA +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMFLRPS*PMNLCL
Trigger: TAAGCACAGATTCATAGGCCAGCTAGGCCTGAGGAA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCATCAAAATGGACCATaGTCATTCGATTGCACTGAA +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWHQNGP*SFDCTE
Trigger: TTCAGTGCAATCGAATGACCATGGTCCATTTTGATG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGGATCCTCCATCTGCTaGGATGCTTCTAGAACATCA +
Preference number: 2 (lower is better)
Translates to: RALEGILGEEDNPILLAKGSSIC*DASRTS
Trigger: TGATGTTCTAGAAGCATCCCAGCAGATGGAGGATCC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAATCCGAAACCAAAATaGGGGCGTAGCTTGATTGGA +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQNPKPK*GRSLIG
Trigger: TCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATTTCCTTCCTGGCCGTaGGTTAGAGAAAGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQFPSWP*VRESVS
Trigger: AGAAACACTTTCTCTAACCCACGGCCAGGAAGGAAA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGGGAGTCCAGCTTACATaGCAGCATCAACCAACAAGC +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLGVQLT*QHQPTS
Trigger: GCTTGTTGGTTGATGCTGCCATGTAAGCTGGACTCC...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCAGCATGAGATACTGTaGCCTTCTCACTCGGCAGAC +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIQHEIL*PSHSAD
Trigger: GTCTGCCGAGTGAGAAGGCCACAGTATCTCATGCTG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTGCCAGAACCTTTATTaGAGAGTGACAGGCCCGATT +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFCQNLY*RVTGPI
Trigger: AATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp TTATGGAAGCTAAGGAGTGACGTCAAGATGTTGTCTGGCCAGAATTaGCAGATAACCATAGAACTCTTCTCCTCCATCAGGCATGGATTT +
Preference number: 2 (lower is better)
Translates to: LWKLRSDVKMLSGQN*QITIELFSSIRHGF
Trigger: AAATCCATGCCTGATGGAGGAGAAGAGTTCTATGGTTATCTGCAAATTCTGGCCAGACAACATCTTGACGTCACTCCTTAGCTTCCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp GAGGCAAAAAGTGATCATCTGCTTCAGTTGAGCAATAAACTGCATTaGGAGTTATCTGGAGTGATGACCCTAAATGAGAGCTCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: EAKSDHLLQLSNKLH*ELSGVMTLNESSQP
Trigger: AGGCTGAGAGCTCTCATTTAGGGTCATCACTCCAGATAACTCCAAATGCAGTTTATTGCTCAACTGAAGCAGATGATCACTTTTTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 90 bp GCTAGGGTGAAGAACTTGGAGGCAAAAAGTGATCATCTGCTTCAGTaGAGCAATAAACTGCATTTGGAGTTATCTGGAGTGATGACCCTA +
Preference number: 2 (lower is better)
Translates to: ARVKNLEAKSDHLLQ*SNKLHLELSGVMTL
Trigger: TAGGGTCATCACTCCAGATAACTCCAAATGCAGTTTATTGCTCAACTGAAGCAGATGATCACTTTTTGCCTCCAAGTTCTTCACCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATTAATACTGTCAGAGTaGAGGAGAGCAGCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: SGHESTSFQLKLTKVLWILILSE*RRAAWW
Trigger: CCACCAAGCTGCTCTCCTTCACTCTGACAGTATTAA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTTCCTAAGTAGGGACTaGCACCAGCTGATCCCAGTG +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYFLSRD*HQLIPV
Trigger: CACTGGGATCAGCTGGTGTCAGTCCCTACTTAGGAA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCACCTGACCCCGAAATaGGCTCTGGACATGAATCCA +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYHLTPK*ALDMNP
Trigger: TGGATTCATGTCCAGAGCTCATTTCGGGGTCAGGTG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGAACATGAGTGCATGTaGTGCCCTCAGGGTGAGGTT +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYEHECM*CPQGEV
Trigger: AACCTCACCCTGAGGGCATCACATGCACTCATGTTC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGTCAACTCCCTCGCTTaGCTGCAGTTGCTACTGGAT +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYVNSLA*LQLLLD
Trigger: ATCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGAC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTCTTGCCATCCTGATTaGTCGAGGAGATGGGTCTAT +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNSCHPD*SRRWVY
Trigger: ATAGACCCATCTCCTCGATCAATCAGGATGGCAAGA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGGCCTAGCTGGCCTATaGATCTGTGCTTATTTACAT +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMGLAGL*ICAYLH
Trigger: ATGTAAATAAGCACAGATTCATAGGCCAGCTAGGCC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAACACTGTGAGTGTGCTTaGAACTGGTTTGCTAACAAA +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQHCECA*NWFANK
Trigger: TTTGTTAGCAAACCAGTTTCAAGCACACTCACAGTG...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCTTGGAGGCAAAAAGTaGTCATCTGCTTCAGTTGAG +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMLGGKK*SSASVE
Trigger: CTCAACTGAAGCAGATGATCACTTTTTGCCTCCAAG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAATCCATAGGATTCTGTaGAAGGTCTTCATCAAGCAA +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKIHRIL*KVFIKQ
Trigger: TTGCTTGATGAAGACCTTTCACAGAATCCTATGGAT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAAGACATGAGCGCTGTTaGAAAGAAATTAGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKRHERC*KEISVR
Trigger: TCTGACACTAATTTCTTTTCAACAGCGCTCATGTCT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAACTTCTAGTGTAGTGTaGAGGAATCAGATTCAAACC +
Preference number: 2 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKTSSVV*RNQIQT
Trigger: GGTTTGAATCTGATTCCTTCACACTACACTAGAAGT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCACGGAAGCCATCTTTaGTCTCTACTGCACGCTATC +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPHGSHL*SLLHAI
Trigger: GATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGATAAAACACACTCCTaGCCTTCAAGAGAACCCAAG +
Preference number: 2 (lower is better)
Translates to: RALEGILGEEDNPILLAKDKTHS*PSREPK
Trigger: CTTGGGTTCTCTTGAAGGGCAGGAGTGTGTTTTATC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAACACATGAAGAGGGCATaGTCTGCAAGTACAAACACA +
Preference number: 2 (lower is better)
Translates to: RALEGILGEEDNPILLAKHMKRA*SASTNT
Trigger: TGTGTTTGTACTTGCAGAGCATGCCCTCTTCATGTG...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACTGATATGTGCAGGATaGAGAACTCCATCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: LLSQAGRISKDREKLHFPLICAG*RTPSWL
Trigger: CAACCAAGATGGAGTTCTGCATCCTGCACATATCAG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATTAGGATCCTCCATCTaGTGGGATGCTTCTAGAACA +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSLGSSI*WDASRT
Trigger: TGTTCTAGAAGCATCCCAGCAGATGGAGGATCCTAA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGAAAAACTCCGGTGGTaGCATCTCTACTTAACCAGA +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMEKLRW*HLYLTR
Trigger: TCTGGTTAAGTAGAGATGGCACCACCGGAGTTTTTC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAATAATACACCCAATGTaGTTCCTACACACTGTGCAG +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQIIHPM*FLHTVQ
Trigger: CTGCACAGTGTGTAGGAAGCACATTGGGTGTATTAT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAACAATTCAGGTGGCTaGTTAGTGGTGCCATCTCTG +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNNNSGG*LVVPSL
Trigger: CAGAGATGGCACCACTAAGCAGCCACCTGAATTGTT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGTCAGGACAAGCATACTaGCTGACACAGACTGAACAG +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLSGQAY*LTQTEQ
Trigger: CTGTTCAGTCTGTGTCAGGCAGTATGCTTGTCCTGA...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAACAAAAATCTACCTTaGAATCCTTCTAGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKNKNLP*NPSSCW
Trigger: CCAACAGCTAGAAGGATTGCAAGGTAGATTTTTGTT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGAACCTGGCATGGTTTaGAGGTACTACAGGCATGTG +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIEPGMV*RYYRHV
Trigger: CACATGCCTGTAGTACCTGCAAACCATGCCAGGTTC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTCTTTTCCAAGTTCTTaGCTTTCCCACCTGACCCCG +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPSFPSS*LSHLTP
Trigger: CGGGGTCAGGTGGGAAAGCCAAGAACTTGGAAAAGA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCAGGGAAACGACGTCTaGAGCAGTAGTGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYQGNDV*SSSVCT
Trigger: TGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGGCACAGCCTCCCGTTaGCATGCTGTGCCAAATTTT +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYGTASR*HAVPNF
Trigger: AAAATTTGGCACAGCATGCCAACGGGAGGCTGTGCC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTGCTGTCAGGTGATGTaGTGTTCAGACACGTCTAAA +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMCCQVM*CSDTSK
Trigger: TTTAGACGTGTCTGAACACCACATCACCTGACAGCA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCCAAGATTGATGATTTaGGGATTTTGCTGGTTAGTA +
Preference number: 2 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWPRLMI*GFCWLV
Trigger: TACTAACCAGCAAAATCCCCAAATCATCAATCTTGG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCAAGAAAAACTCCGGTaGTGCCATCTCTACTTAACC +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMQEKLR*CHLYLT
Trigger: GGTTAAGTAGAGATGGCACCACCGGAGTTTTTCTTG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGACAAAAGTAATAAACTaGCAGCCCACAGACTTTTGT +
Preference number: 2 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKTKVIN*QPTDFC
Trigger: ACAAAAGTCTGTGGGCTGCCAGTTTATTACTTTTGT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTCTTGCTACCTATTTCTaGAAAGAAAACCTAGTGGGT +
Preference number: 2 (lower is better)
Translates to: KFPSATVIVMELSWAGSSLATYF*KENLVG
Trigger: ACCCACTAGGTTTTCTTTCCAGAAATAGGTAGCAAG...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCGACAGTCATTGTCATaGAACTTTCCTGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIRQSLS*NFPGLG
Trigger: TCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp TCTCATTTTCGGACAGATCATATAGATAAAGAATTCCAAGCTCCATaGGTCACTCATACATACACGTGGGCAAGCCCTGGAGTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: SHFRTDHIDKEFQAP*VTHTYTWASPGVSE
Trigger: TTCAGAAACTCCAGGGCTTGCCCACGTGTATGTATGAGTGACCAATGGAGCTTGGAATTCTTTATCTATATGATCTGTCCGAAAATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGGGGTCGGAGGGAAGTaGGATCTGAAAAGTTCATTG +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYGVGGK*DLKSSL
Trigger: CAATGAACTTTTCAGATCTCACTTCCCTCCGACCCC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGCCAGACATGCAGCGTaGCAAACCTGTGTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYARHAA*QTCVGF
Trigger: AAAACCAACACAGGTTTGTCACGCTGCATGTCTGGC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAAGAAAGTCCATACTTaGCCAGGTAATCCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGKKVHT*PGNPAV
Trigger: AACAGCAGGATTACCTGGTCAAGTATGGACTTTCTT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCAGCTGCCCTTGAGCTaGGTTTGTAAATTTTACTGG +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNQLPLS*VCKFYW
Trigger: CCAGTAAAATTTACAAACTCAGCTCAAGGGCAGCTG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGTCATTCGATTGCACTaGAGTCTGCAGATAATCTCT +
Preference number: 2 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGVIRLH*SLQIIS
Trigger: AGAGATTATCTGCAGACTTCAGTGCAATCGAATGAC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGTCATTCGATTGCACTaGAGTCTGCAGATAATCTCT +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSVIRLH*SLQIIS
Trigger: AGAGATTATCTGCAGACTTCAGTGCAATCGAATGAC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAATCACTCTGTCTCCCTaGCCTAAATCCATAATCTTT +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQITLSP*PKSIIF
Trigger: AAAGATTATGGATTTAGGTCAGGGAGACAGAGTGAT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAACTTCTAGAACATCACTaGTGCTTTGGTGAAATTGGA +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQLLEHH*CFGEIG
Trigger: TCCAATTTCACCAAAGCATCAGTGATGTTCTAGAAG...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCCCTGCCTTTGGTTCTaGAATCACACATATCTAATC +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMPCLWF*NHTYLI
Trigger: GATTAGATATGTGTGATTTCAGAACCAAAGGCAGGG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCCCTATGTCTTTAGATaGACCTGGCATGGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIPYVFR*TWHGLQ
Trigger: CTGCAAACCATGCCAGGTTCATCTAAAGACATAGGG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATATCTTTGCTCTCTACTaGACGCTATCATTTCTGGTG +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHIFALY*TLSFLV
Trigger: CACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGAT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCACGGAAGCCATCTTTaGTCTCTACTGCACGCTATC +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYHGSHL*SLLHAI
Trigger: GATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGGAGCAGTAGTGTCTaGACACAAGGTATTAATCGA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGWSSSV*TQGINR
Trigger: TCGATTAATACCTTGTGTGCAGACACTACTGCTCCA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGGAGCAGTAGTGTCTaGACACAAGGTATTAATCGA +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHWSSSV*TQGINR
Trigger: TCGATTAATACCTTGTGTGCAGACACTACTGCTCCA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCGCTTGACTGCAGTTaGTACTGGATTTCCTTTTGT +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSLDCS*YWISFC
Trigger: ACAAAAGGAAATCCAGTAGCAACTGCAGTCAAGCGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTTAGCTGGCCAGACATaGAGCGTGACAAACCTGTGT +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYLAGQT*SVTNLC
Trigger: ACACAGGTTTGTCACGCTGCATGTCTGGCCAGCTAA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGGAAAGGCAACTTCTTaGTTGGCTAGGTTATGGAAG +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNGKATS*LARLWK
Trigger: CTTCCATAACCTAGCCAAGCAAGAAGTTGCCTTTCC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGTCATTAGAGCACACTaGTTTGTCTTGGAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSVIRAH*FVLERQ
Trigger: TTGCCTTTCCAAGACAAAGCAGTGTGCTCTAATGAC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCACATGAAGAGGGCATaGTCTGCAAGTACAAACACA +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNHMKRA*SASTNT
Trigger: TGTGTTTGTACTTGCAGAGCATGCCCTCTTCATGTG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAATCAGAATACTTTACATaGCTCTGCCACAGGGAGTTA +
Preference number: 2 (lower is better)
Translates to: RALEGILGEEDNPILLAKSEYFT*LCHREL
Trigger: TAACTCCCTGTGGCAGAGGCATGTAAAGTATTCTGA...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGTGATGATCTTATTCTaGCTGCTACTTGGCCACTGT +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNVMILF*LLLGHC
Trigger: ACAGTGGCCAAGTAGCAGGCAGAATAAGATCATCAC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCCTGAGAGTTACCTCTaGATTGGTGTTCCCCAATCA +
Preference number: 2 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGPESYL*IGVPQS
Trigger: TGATTGGGGAACACCAATGCAGAGGTAACTCTCAGG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCCTGAGAGTTACCTCTaGATTGGTGTTCCCCAATCA +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIPESYL*IGVPQS
Trigger: TGATTGGGGAACACCAATGCAGAGGTAACTCTCAGG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTGCTTTTGAGAAACTaGCCCTCTTTAAGGCATGGG +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILLLRN*PSLRHG
Trigger: CCCATGCCTTAAAGAGGGGCAGTTTCTCAAAAGCAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTCTTTTCCAAGTTCTTaGCTTTCCCACCTGACCCCG +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYSFPSS*LSHLTP
Trigger: CGGGGTCAGGTGGGAAAGCCAAGAACTTGGAAAAGA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGACAATGGAGTACACTTaGAATGAAACCACTCTCCCA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGTMEYT*NETTLP
Trigger: TGGGAGAGTGGTTTCATTCCAAGTGTACTCCATTGT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGTTTGTAAATTTTACTaGGAAACCACCCCGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LLSQAGRISKDREKLHFPVCKFY*ETTPCC
Trigger: ACAGCACGGGGTGGTTTCCCAGTAAAATTTACAAAC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTTAAAGTGCAGGCCATaGCCTTCCAAGGCATACAAA +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLKCRP*PSKAYK
Trigger: TTTGTATGCCTTGGAAGGCCATGGCCTGCACTTTAA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCACTTGAAGGCATTTTaGGTGAGGAAGACAATCCTA +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMHLKAF*VRKTIL
Trigger: TAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGTTTCCAATCCAGCTATaGCGTCTGTGTGCATGTCTA +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLFPIQL*RLCACL
Trigger: TAGACATGCACACAGACGCCATAGCTGGATTGGAAA...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTGCCAGAACCTTTATTaGAGAGTGACAGGCCCGATT +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGICQNLY*RVTGPI
Trigger: AATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGATGCAGAAGCCAGATTaGTTCAAAAGAAAGGGTAAG +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGMQKPD*FKRKGK
Trigger: CTTACCCTTTCTTTTGAATCAATCTGGCTTCTGCAT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGAAGGCCGTATTTGGTaGTCATTACATTTTAGAACG +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGEGRIW*SLHFRT
Trigger: CGTTCTAAAATGTAATGATCACCAAATACGGCCTTC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCATGCTTTCTTTCCTaGACTGCTTGTTTGCATATT +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGACFLS*TACLHI
Trigger: AATATGCAAACAAGCAGTTCAGGAAAGAAAGCATGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCAACACAGCTGCCCTTaGGCTGAGTTTGTAAATTTT +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNQHSCP*AEFVNF
Trigger: AAAATTTACAAACTCAGCTCAAGGGCAGCTGTGTTG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAACATCTCCTTTGGAGTTaGAAAGGGAATATGATATCA +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQHLLWS*KGNMIS
Trigger: TGATATCATATTCCCTTTTCAACTCCAAAGGAGATG...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACTTCTAGAACATCACTaGTGCTTTGGTGAAATTGGA +
Preference number: 2 (lower is better)
Translates to: LLSQAGRISKDREKLHFPLLEHH*CFGEIG
Trigger: TCCAATTTCACCAAAGCATCAGTGATGTTCTAGAAG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAACAATCTCCCCAAAGTaGGCCATTACTATAGAAATA +
Preference number: 2 (lower is better)
Translates to: HDERSGDHWTANSIKFKQTISPK*AITIEI
Trigger: TATTTCTATAGTAATGGCTCACTTTGGGGAGATTGT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTATCCATAGGATTCTGTaGAAGGTCTTCATCAAGCAA +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFIHRIL*KVFIKQ
Trigger: TTGCTTGATGAAGACCTTTCACAGAATCCTATGGAT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGGAGAAGCTATGTTACTaGTCATCCCTTCAGGGATTA +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLEKLCY*SSLQGL
Trigger: TAATCCCTGAAGGGATGATCAGTAACATAGCTTCTC...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTACTTCTAGTGTAGTGTaGAGGAATCAGATTCAAACC +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFTSSVV*RNQIQT
Trigger: GGTTTGAATCTGATTCCTTCACACTACACTAGAAGT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATACCTTTTTATGGATCTaGTCTACCTATCAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHTFLWI*STYQGN
Trigger: GTTTCCCTGATAGGTAGAGCAGATCCATAAAAAGGT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTTCAAGCCACTGGGCTaGCAACATTCCAATTTATAT +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGFKPLG*QHSNLY
Trigger: ATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGATACAGAAGCAAATaGAGAATGTCCACATCTCCA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGRYRSK*RMSTSP
Trigger: TGGAGATGTGGACATTCTGCATTTGCTTCTGTATCT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGTCGTCAACCCAGTGTaGCATAAAAGAAGCAATTTT +
Preference number: 2 (lower is better)
Translates to: LLSQAGRISKDREKLHFPVVNPV*HKRSNF
Trigger: AAAATTGCTTCTTTTATGGCACACTGGGTTGACGAC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACTTTGTTATAATAGCTaGCGTAAAGGATTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSLCYNS*RKGLSL
Trigger: GAGGCTCAATCCTTTACGGCAGCTATTATAACAAAG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACTTTGTTATAATAGCTaGCGTAAAGGATTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: LLSQAGRISKDREKLHFPLCYNS*RKGLSL
Trigger: GAGGCTCAATCCTTTACGGCAGCTATTATAACAAAG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAACACAGGCCTCATGTaGTCTGTGATACTTACCATA +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNNTGLM*SVILTI
Trigger: TATGGTAAGTATCACAGAGCACATGAGGCCTGTGTT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGTGTTTTCAAACAAAATaGTGCAGGCCTGGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLCFQTK*CRPGSE
Trigger: TTCAGAGCCAGGCCTGCAGCATTTTGTTTGAAAACA...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTTGACAAAGGTTCTGTaGATAGCGCTTGAGAAACAA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGLTKVL*IALEKQ
Trigger: TTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTTGACAAAGGTTCTGTaGATAGCGCTTGAGAAACAA +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLTKVL*IALEKQ
Trigger: TTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGACTGCAGTTGCTACTaGATTTCCTTTTGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHDCSCY*ISFCSV
Trigger: AACAGAACAAAAGGAAATCCAGTAGCAACTGCAGTC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGTGACAAACCTGTGTTaGTTTTTGCTGATGGAATCT +
Preference number: 2 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHVTNLC*FLLMES
Trigger: AGATTCCATCAGCAAAAACCAACACAGGTTTGTCAC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGTTTGTAAATTTTACTaGGAAACCACCCCGTGCTGT +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNVCKFY*ETTPCC
Trigger: ACAGCACGGGGTGGTTTCCCAGTAAAATTTACAAAC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCACCATCAAAATCAGGTaGCTGGGACGTTCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGITIKIR*LGRSFV
Trigger: GACAAAAGAACGTCCCAGCCACCTGATTTTGATGGT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp TCATTTCGTCTCCTGAGATGTATGTTAAGATGGCAAAATAGTTGCTaGGTGGTGGTTGTTGTGAAATTCACAGTGTTTTGCCTACAACAC +
Preference number: 2 (lower is better)
Translates to: SFRLLRCMLRWQNSC*VVVVVKFTVFCLQH
Trigger: GTGTTGTAGGCAAAACACTGTGAATTTCACAACAACCACCACCAAGCAACTATTTTGCCATCTTAACATACATCTCAGGAGACGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTACTGTGTCTATGGATaGAGAAGTACACACTGCTTC +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPYCVYG*RSTHCF
Trigger: GAAGCAGTGTGTACTTCTTCATCCATAGACACAGTA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAACTGGAGTGTCTGCTaGTATAACAAATTACGTTTG +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGNWSVC*YNKLRL
Trigger: CAAACGTAATTTGTTATATCAGCAGACACTCCAGTT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCACTTTTGAATTTTTaGGAATTGGCTTTCAAAGCC +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGALLNF*ELAFKA
Trigger: GGCTTTGAAAGCCAATTCTCAAAAATTCAAAAGTGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCATGGGTCCTTAATATaGTACATACATGCACATGTA +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGHGSLI*YIHAHV
Trigger: TACATGTGCATGTATGTATCATATTAAGGACCCATG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAAGACTGAAGACCAAATaGCTTGCAAAAGTAAACTCT +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSRLKTK*LAKVNS
Trigger: AGAGTTTACTTTTGCAAGTCATTTGGTCTTCAGTCT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTATGAAGTAGCCAAGTaGAATGCTGCAATCCATAGG +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIYEVAK*NAAIHR
Trigger: CCTATGGATTGCAGCATTTCACTTGGCTACTTCATA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCAGGAGCAAAGGTAATTaGCATGTTGCAGATAACTGG +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIRSKGN*HVADNW
Trigger: CCAGTTATCTGCAACATGTCAATTACCTTTGCTCCT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTTTCCTGTTGTGAGATaGACCTTTCTTAGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIFPVVR*TFLSLR
Trigger: TCTGAGGCTAAGAAAGGTTCATCTCACAACAGGAAA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAATCGACGAAGACCATaGACAATTTTGCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPNRRRP*TILLAQ
Trigger: CTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGTCATACCTTTTTATaGATCTGCTCTACCTATCAG +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSHTFL*ICSTYQ
Trigger: CTGATAGGTAGAGCAGATCCATAAAAAGGTATGACT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGTGTGTATACGGCCTaGATATATACAAACATCTCT +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGCVYTA*IYTNIS
Trigger: AGAGATGTTTGTATATATCCAGGCCGTATACACACA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACCAAGATTGATGATTTaGGGATTTTGCTGGTTAGTA +
Preference number: 2 (lower is better)
Translates to: LLSQAGRISKDREKLHFPPRLMI*GFCWLV
Trigger: TACTAACCAGCAAAATCCCCAAATCATCAATCTTGG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAACTGGTGGAATTACATaGGACTTTTCGTTTCATCTT +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSTGGIT*DFSFHL
Trigger: AAGATGAAACGAAAAGTCCCATGTAATTCCACCAGT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGTTAACTCTAACTGGTaGAATTACATGGGACTTTTC +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMVNSNW*NYMGLF
Trigger: GAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAAC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAGGCATTCCCTAAAGTaGAGACTAGCTGTTTTGATA +
Preference number: 2 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNRHSLK*RLAVLI
Trigger: TATCAAAACAGCTAGTCTCCACTTTAGGGAATGCCT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGTAAATCAACACCTTTaGGAAAGATCGGAATCTAAG +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFVNQHL*ERSESK
Trigger: CTTAGATTCCGATCTTTCCCAAAGGTGTTGATTTAC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTATTCTCAGTTGGTCATaGGGTCAGTTTAGAATACTA +
Preference number: 2 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFILSWS*GQFRIL
Trigger: TAGTATTCTAAACTGACCCCATGACCAACTGAGAAT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCATGCAGAAGCCAGATTaGTTCAAAAGAAAGGGTAAG +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPMQKPD*FKRKGK
Trigger: CTTACCCTTTCTTTTGAATCAATCTGGCTTCTGCAT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCACAACGCAGAGACATTaGTACTCAGCTAATAAACTC +
Preference number: 2 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPTTQRH*YSANKL
Trigger: GAGTTTATTAGCTGAGTATCAATGTCTCTGCGTTGT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTCCCAAAGTCTCATTTaGCTTAAACAAATCTTTGCT +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSQSLI*LKQIFA
Trigger: AGCAAAGATTTGTTTAAGGCAAATGAGACTTTGGGA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGATTTTAGAACGAGGATaGCACTCTTCTAAAAATCAG +
Preference number: 2 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGILERG*HSSKNQ
Trigger: CTGATTTTTAGAAGAGTGGCATCCTCGTTCTAAAAT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAATATGTTCAAAACCTCTaGGGTTCTGTGAAAAATATC +
Preference number: 2 (lower is better)
Translates to: RALEGILGEEDNPILLAKYVQNL*GSVKNI
Trigger: GATATTTTTCACAGAACCGCAGAGGTTTTGAACATA...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATCAATACTGTGTCTATaGATGAAGAAGTACACACTG +
Preference number: 2 (lower is better)
Translates to: SGHESTSFQLKLTKVLWISILCL*MKKYTL
Trigger: CAGTGTGTACTTCTTCATCCATAGACACAGTATTGA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAAGACAAAACTGGAATaGGATGCTCCCAAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYKTKLE*DAPKVS
Trigger: TGAGACTTTGGGAGCATCCCATTCCAGTTTTGTCTT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAATTAACTATAATAGCTaGAGAAGTATGGCACACTCT +
Preference number: 2 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSINYNS*RSMAHS
Trigger: AGAGTGTGCCATACTTCTCCAGCTATTATAGTTAAT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGATTAACTATAATAGCTaGAGAAGTATGGCACACTCT +
Preference number: 2 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMINYNS*RSMAHS
Trigger: AGAGTGTGCCATACTTCTCCAGCTATTATAGTTAAT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCCTTTTTATATCAAGTaGTACCTAAATGGATCCTGG +
Preference number: 2 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLPFYIK*YLNGSW
Trigger: CCAGGATCCATTTAGGTACCACTTGATATAAAAAGG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGCCCCCATTGAGCCATaGGTAAATATAATAAGATAT +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIAPIEP*VNIIRY
Trigger: ATATCTTATTATATTTACTCATGGCTCAATGGGGGC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGACTGCAGTTGCTACTaGATTTCCTTTTGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYDCSCY*ISFCSV
Trigger: AACAGAACAAAAGGAAATCCAGTAGCAACTGCAGTC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCCTTTTTATATCAAGTaGTACCTAAATGGATCCTGG +
Preference number: 2 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGPFYIK*YLNGSW
Trigger: CCAGGATCCATTTAGGTACCACTTGATATAAAAAGG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGTAAATCAACACCTTTaGGAAAGATCGGAATCTAAG +
Preference number: 2 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIVNQHL*ERSESK
Trigger: CTTAGATTCCGATCTTTCCCAAAGGTGTTGATTTAC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCATGGGTCCTTAATATaGTACATACATGCACATGTA +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYHGSLI*YIHAHV
Trigger: TACATGTGCATGTATGTATCATATTAAGGACCCATG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGTCATACCTTTTTATaGATCTGCTCTACCTATCAG +
Preference number: 2 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYSHTFL*ICSTYQ
Trigger: CTGATAGGTAGAGCAGATCCATAAAAAGGTATGACT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 90 bp CATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTCTaGTTACTTTGTATGTGTTTATACTCAATTCATAAATGGACTGTC +
Preference number: 2 (lower is better)
Translates to: HEVRETQGFAFLRNL*LLCMCLYSIHKWTV
Trigger: GACAGTCCATTTATGAATTGAGTATAAACACATACAAAGTAACAAGAGATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 90 bp GATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTaGCGTTTCTTAGGAATCTCTTGTTACTTTGTATGTGTTTATACT +
Preference number: 2 (lower is better)
Translates to: DYSKWLNMKCVKLKD*RFLGISCYFVCVYT
Trigger: AGTATAAACACATACAAAGTAACAAGAGATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp AGGCTCCCATTCCTGTGGGACACAGTTGGCTGCGGCTaGGGACAGTGGCCCCTCTGGAAGGGCAGGCATCGG +
Preference number: 3 (lower is better)
Translates to: RLPFLWDTVGCG*GQWPLWKGRHR
Trigger: CCGATGCCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGAATGGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp AAACCTAGGCTCCCATTCCTGTGGGACACAGTTGGCTaGGGCTGGGGACAGTGGCCCCTCTGGAAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: KPRLPFLWDTVG*GWGQWPLWKGR
Trigger: CCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGAATGGGAGCCTAGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp GACACAGTTGGCTGCGGCTGGGGACAGTGGCCCCTCTaGAAGGGCAGGCATCGGCTCACACAGATCATTCTG +
Preference number: 3 (lower is better)
Translates to: DTVGCGWGQWPL*KGRHRLTQIIL
Trigger: CAGAATGATCTGTGTGAGCCGATGCCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp GTCTCTGGCCACACGGGAGTAGGACCAACCAGGGAATaGGTTGAGGGGAGACATTGGTGCAGAATTCCCAGC +
Preference number: 3 (lower is better)
Translates to: VSGHTGVGPTRE*VEGRHWCRIPS
Trigger: GCTGGGAATTCTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCCTACTCCCGTGTGGCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGTGAAGGAGAGCAGCTaGGTGGCCTCCAGCGGCAGT +
Preference number: 3 (lower is better)
Translates to: TLCAILCLTEAIFALYCTVKESS*VASSGS
Trigger: ACTGCCGCTGGAGGCCACCAAGCTGCTCTCCTTCAC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATCGGACCTCCCCACATaGGGGGCCAGCTGCCCTTAC +
Preference number: 3 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLSDLPT*GASCPY
Trigger: GTAAGGGCAGCTGGCCCCCAATGTGGGGAGGTCCGA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp TGGCCACACGGGAGTAGGACCAACCAGGGAATGGGTTaGGGGGAGACATTGGTGCAGAATTCCCAGCAAAGG +
Preference number: 3 (lower is better)
Translates to: WPHGSRTNQGMG*GETLVQNSQQR
Trigger: CCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCCTACTCCCGTGTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp GGACCAACCAGGGAATGGGTTGAGGGGAGACATTGGTaGAGAATTCCCAGCAAAGGGAGACAGCTGAGGGTC +
Preference number: 3 (lower is better)
Translates to: GPTREWVEGRHW*RIPSKGRQLRV
Trigger: GACCCTCAGCTGTCTCCCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp AATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGTaGGACACAGTTGGCTGCGGCTGGGGACAGTGGCCC +
Preference number: 3 (lower is better)
Translates to: NHKIWKPRLPFL*DTVGCGWGQWP
Trigger: GGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCGTCTGAGGAGTACGTaGGGAAGGATCGGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPRLRST*GRIGLG
Trigger: CCCCAGACCGATCCTTCCCAACGTACTCCTCAGACG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCGTCTGAGGAGTACGTaGGGAAGGATCGGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: TLCAILCLTEAIFALYCTRLRST*GRIGLG
Trigger: CCCCAGACCGATCCTTCCCAACGTACTCCTCAGACG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATCCTGTGGGACACAGTaGGCTGCGGCTGGGGACAGT +
Preference number: 3 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLSCGTQ*AAAGDS
Trigger: ACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp CCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTaGTCATCATTGGCCTTCAAGCCACTGGGCTGCCAA +
Preference number: 3 (lower is better)
Translates to: PKSCSSRCGVLD*SSLAFKPLGCQ
Trigger: TTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp GTAGGACCAACCAGGGAATGGGTTGAGGGGAGACATTaGTGCAGAATTCCCAGCAAAGGGAGACAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: VGPTREWVEGRH*CRIPSKGRQLR
Trigger: CCTCAGCTGTCTCCCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGAGAGGGGGAAGGAATaGTATTGGGACCTGCAGAAC +
Preference number: 3 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRERGKE*YWDLQN
Trigger: GTTCTGCAGGTCCCAATACAATTCCTTCCCCCTCTC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp CTCAGAGGGCAGTGGCTCTTGCTTCCAGTTAGGGGCTaGGTCCAAGGAGAGAGATTCCTTTATGTGGCAACC +
Preference number: 3 (lower is better)
Translates to: LRGQWLLLPVRG*VQGERFLYVAT
Trigger: GGTTGCCACATAAAGGAATCTCTCTCCTTGGACTCAGCCCCTAACTGGAAGCAAGAGCCACTGCCCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp AACACAGGCCTCATGTGCTCTGTGATACTTACCATATaGGAGTCTGACGTGGCCAGCTATGGCCAGACCCCC +
Preference number: 3 (lower is better)
Translates to: NTGLMCSVILTI*ESDVASYGQTP
Trigger: GGGGGTCTGGCCATAGCTGGCCACGTCAGACTCTCATATGGTAAGTATCACAGAGCACATGAGGCCTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp TGCTCAGCTGGTCCTGGTCCACAATCTACTAGCACATaGAAGAGTGGCCAATCCGAAACCAAAATGGGGGCG +
Preference number: 3 (lower is better)
Translates to: CSAGPGPQSTST*KSGQSETKMGA
Trigger: CGCCCCCATTTTGGTTTCGGATTGGCCACTCTTGCATGTGCTAGTAGATTGTGGACCAGGACCAGCTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp AGACTAGATGTGACTGGCCCTGCCCATGTGGCTGGATaGACCAACCCTGAGAGACCCTATGCTAGATGGAAT +
Preference number: 3 (lower is better)
Translates to: RLDVTGPAHVAG*TNPERPYARWN
Trigger: ATTCCATCTAGCATAGGGTCTCTCAGGGTTGGTGCATCCAGCCACATGGGCAGGGCCAGTCACATCTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp GCTCATCTCGCTGTGGGGTCTTGGACTGCTCATCATTaGCCTTCAAGCCACTGGGCTGCCAACATTCCAATT +
Preference number: 3 (lower is better)
Translates to: AHLAVGSWTAHH*PSSHWAANIPI
Trigger: AATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp TTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTaGCTGTTGAGGGGAGCAGAATGGGTGCCTTGTGTG +
Preference number: 3 (lower is better)
Translates to: FPLLVRQGRSGL*LLRGAEWVPCV
Trigger: CACACAAGGCACCCATTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp GCTGGATGCACCAACCCTGAGAGACCCTATGCTAGATaGAATTGCTTGTCCTCAGTCCAGCTGTCCCTCTGT +
Preference number: 3 (lower is better)
Translates to: AGCTNPERPYAR*NCLSSVQLSLC
Trigger: ACAGAGGGACAGCTGGACTGAGGACAAGCAATTCCATCTAGCATAGGGTCTCTCAGGGTTGGTGCATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGGGCACAGCCTCCCGTaGGCATGCTGTGCCAAATTT +
Preference number: 3 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTGHSLP*ACCAKF
Trigger: AAATTTGGCACAGCATGCCAACGGGAGGCTGTGCCC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCACTCCAGACTTGATGTaGCTGAGCTCCTCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLTPDLM*LSSSAP
Trigger: TGGAGCTGAGGAGCTCAGCAACATCAAGTCTGGAGT...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCAGAGTTACCTCTGCATaGGTGTTCCCCAATCACAGC +
Preference number: 3 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPRVTSA*VFPNHS
Trigger: GCTGTGATTGGGGAACACCAATGCAGAGGTAACTCT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTTCCTGTGGGACACAGTaGGCTGCGGCTGGGGACAGT +
Preference number: 3 (lower is better)
Translates to: KFPSATVIVMELSWAGSSSCGTQ*AAAGDS
Trigger: ACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGA...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp GCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTaGGGAGTACGTTGGGAAGGATCGGTCTGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: AAVKRCSSSQPV*GVRWEGSVWGK
Trigger: TTTTCCCCAGACCGATCCTTCCCAACGTACTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp TTGTATTGGGACCTGCAGAACAGCAGCAATGTGCCATaGAGGCTCCCACGAGATGAGTCGTCAACCCAGTGT +
Preference number: 3 (lower is better)
Translates to: LYWDLQNSSNVP*RLPRDESSTQC
Trigger: ACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCTGTTCTGCAGGTCCCAATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp TCTTCAGCTCTTCGAGCTATTTACTCCACACACCCCTaGAGAGGTGTCGCCTCTGCTCTGTCTGAGGAGATG +
Preference number: 3 (lower is better)
Translates to: SSALRAIYSTHP*RGVASALSEEM
Trigger: CATCTCCTCAGACAGAGCAGAGGCGACACCTCTTCAGGGGTGTGTGGAGTAAATAGCTCGAAGAGCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp AGGAATTGTATTGGGACCTGCAGAACAGCAGCAATGTaGCATGAAGGCTCCCACGAGATGAGTCGTCAACCC +
Preference number: 3 (lower is better)
Translates to: RNCIGTCRTAAM*HEGSHEMSRQP
Trigger: GGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCTGTTCTGCAGGTCCCAATACAATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp AAGCGGGCTTCCCTCCATTATGCTCTCTCTCGCACCTaGCGTGAAACTGGTTTTCTGTCTTCAGCTCTTCGA +
Preference number: 3 (lower is better)
Translates to: KRASLHYALSRT*RETGFLSSALR
Trigger: TCGAAGAGCTGAAGACAGAAAACCAGTTTCACGCCAGGTGCGAGAGAGAGCATAATGGAGGGAAGCCCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAGAACTCCATCTTGGTaGGCCGATGATGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPRTPSW*ADDEGV
Trigger: TACTCCCTCATCATCGGCCAACCAAGATGGAGTTCT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCACAGCCAAGGTATCCTaGATGGAAGTGAAGGCATCC +
Preference number: 3 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPTAKVS*MEVKAS
Trigger: GGATGCCTTCACTTCCATCAAGGATACCTTGGCTGT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGTGAAGGAGAGCAGCTaGGTGGCCTCCAGCGGCAGT +
Preference number: 3 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHVKESS*VASSGS
Trigger: ACTGCCGCTGGAGGCCACCAAGCTGCTCTCCTTCAC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTCACGGAAGCCATCTTaGCTCTCTACTGCACGCTAT +
Preference number: 3 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLSRKPS*LSTARY
Trigger: ATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGATTGGATTCATCCTGTaGGTACACACACTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRIGFIL*VHTLQS
Trigger: TGACTGGAGTGTGTGTACCAACAGGATGAATCCAAT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCAAATGGGGGCGTAGCTaGATTGGATTCATCCTGTTG +
Preference number: 3 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLKWGRS*IGFILL
Trigger: CAACAGGATGAATCCAATCAAGCTACGCCCCCATTT...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp CTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATaGAAACCCAGCAGTATGACAGTATGTTGTAGGGGG +
Preference number: 3 (lower is better)
Translates to: LCCWGQDKLSYP*KPSSMTVCCRG
Trigger: CCCCCTACAACATACTGTCATACTGCTGGGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp TTCCTGGGCTGGGAGTTCTGTCAGCCAAATTCAGTCTaGCAGCACCTGGCAGCAAATTCAATTCATGGTCTG +
Preference number: 3 (lower is better)
Translates to: FLGWEFCQPNSV*QHLAANSIHGL
Trigger: CAGACCATGAATTGAATTTGCTGCCAGGTGCTGCCAGACTGAATTTGGCTGACAGAACTCCCAGCCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCGTCTGAGGAGTACGTaGGGAAGGATCGGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHRLRST*GRIGLG
Trigger: CCCCAGACCGATCCTTCCCAACGTACTCCTCAGACG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCCCAGTGGTTGTCTTaGTTCCTCCCATATTGCGGT +
Preference number: 3 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSQWLS*FLPYCG
Trigger: ACCGCAATATGGGAGGAACAAAGACAACCACTGGGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCACGGAAGCCATCTTaGCTCTCTACTGCACGCTAT +
Preference number: 3 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSRKPS*LSTARY
Trigger: ATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGAAGGCAACTTCTTGCTaGGCTAGGTTATGGAAGCTA +
Preference number: 3 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLKATSC*ARLWKL
Trigger: TAGCTTCCATAACCTAGCCAAGCAAGAAGTTGCCTT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGAGACCAACTCCAGACTaGATGTTGCTGAGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGRPTPD*MLLSSS
Trigger: TGAGGAGCTCAGCAACATCAAGTCTGGAGTTGGTCT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp GAACAGCAGCAATGTGCCATGAAGGCTCCCACGAGATaGGTCGTCAACCCAGTGTGCCATAAAAGAAGCAAT +
Preference number: 3 (lower is better)
Translates to: EQQQCAMKAPTR*VVNPVCHKRSN
Trigger: ATTGCTTCTTTTATGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp TCTTTCCAGCGCATAACACAGGCCTCATGTGCTCTGTaGTACTTACCATATGAGAGTCTGACGTGGCCAGCT +
Preference number: 3 (lower is better)
Translates to: SFQRITQASCAL*YLPYESLTWPA
Trigger: AGCTGGCCACGTCAGACTCTCATATGGTAAGTATCACAGAGCACATGAGGCCTGTGTTATGCGCTGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp ACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTaGTCTCTACTGCACGCTATCATTTCTGGTGATGGG +
Preference number: 3 (lower is better)
Translates to: TMRHLVSHGSHL*SLLHAIISGDG
Trigger: CCCATCACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 72 bp CAACCTACGAAGACAAAACTGTGTCCGAGCACACTATaGGCCATCTTGTGTCTCACGGAAGCCATCTTTGCT +
Preference number: 3 (lower is better)
Translates to: QPTKTKLCPSTL*AILCLTEAIFA
Trigger: AGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGTCTTCGTAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 72 bp AGTGACCAAAAGGAGACTCCAGCTATCAGAGGTCCTTaGACAGCCAAGGTATCCTTGATGGAAGTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: SDQKETPAIRGP*TAKVSLMEVKA
Trigger: TGCCTTCACTTCCATCAAGGATACCTTGGCTGTGCAAGGACCTCTGATAGCTGGAGTCTCCTTTTGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp GGGCAAGCCCTGGAGTTTCTGAACATAGGAAGAGAATaGAAGTCATGTGTTAGGTCCGCTCCCTTGCATGAA +
Preference number: 3 (lower is better)
Translates to: GQALEFLNIGRE*KSCVRSAPLHE
Trigger: TTCATGCAAGGGAGCGGACCTAACACATGACTTGCATTCTCTTCCTATGTTCAGAAACTCCAGGGCTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp CTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATaGAGGCTTCATATAGTACAGCCTCCAAACACCGCC +
Preference number: 3 (lower is better)
Translates to: LHWCSPITAHSI*RLHIVQPPNTA
Trigger: GGCGGTGTTTGGAGGCTGTACTATATGAAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp GGACGAAGTGGGCTGTGGCTGTTGAGGGGAGCAGAATaGGTGCCTTGTGTGATAGCTTTAGCTAATGTTAAA +
Preference number: 3 (lower is better)
Translates to: GRSGLWLLRGAE*VPCVIALANVK
Trigger: TTTAACATTAGCTAAAGCTATCACACAAGGCACCCATTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp AGATATAATAGGAGGAAGGATTTGCTAGGATGTCTCTaGCCACACGGGAGTAGGACCAACCAGGGAATGGGT +
Preference number: 3 (lower is better)
Translates to: RYNRRKDLLGCL*PHGSRTNQGMG
Trigger: ACCCATTCCCTGGTTGGTCCTACTCCCGTGTGGCCAGAGACATCCTAGCAAATCCTTCCTCCTATTATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp GAGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTGCTaGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGC +
Preference number: 3 (lower is better)
Translates to: EKPKANSCVLCC*VGLGLFSSCPC
Trigger: GCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAACACAGGAGTTTGCTTTTGGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp TTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTaGGCTGGGAGTTCTGTCAGCCAAATTCAGTCTGGC +
Preference number: 3 (lower is better)
Translates to: FPSATVIVMELS*AGSSVSQIQSG
Trigger: GCCAGACTGAATTTGGCTGACAGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGAGTGACGTCAAGATGTaGTCTGGCCAGAATTTGCAG +
Preference number: 3 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGSDVKM*SGQNLQ
Trigger: CTGCAAATTCTGGCCAGACAACATCTTGACGTCACT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCAGCCTTTCCCCTTATaGGTAAGACAAGGACGAAGT +
Preference number: 3 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGQPFPL*VRQGRS
Trigger: ACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGAAGCGCTAAAGCAATaGTTTCTACCCGTTTTTCAG +
Preference number: 3 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLEALKQ*FLPVFQ
Trigger: CTGAAAAACGGGTAGAAACAATTGCTTTAGCGCTTC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGTGCTTGAAACTGGTTaGCTAACAAATCTTCATCTC +
Preference number: 3 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRVLETG*LTNLHL
Trigger: GAGATGAAGATTTGTTAGCAAACCAGTTTCAAGCAC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGTGCCAGAACCTTTATaGGAGAGTGACAGGCCCGAT +
Preference number: 3 (lower is better)
Translates to: KFPSATVIVMELSWAGSSVPEPL*ESDRPD
Trigger: ATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCAC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGAATAGGAGGAAGGATTaGCTAGGATGTCTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVNRRKD*LGCLWP
Trigger: TGGCCAGAGACATCCTAGCAAATCCTTCCTCCTATT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp GCTATGGCGTCTGTGTGCATGTCTAACTGTCAGAGCTaGTTGTGTTTTCAAACAAAATGCTGCAGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: AMASVCMSNCQS*LCFQTKCCRPG
Trigger: GCCAGGCCTGCAGCATTTTGTTTGAAAACACAATCAGCTCTGACAGTTAGACATGCACACAGACGCCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp GTCTTTTTACTCCTCAGAAAGGTCCTCAGGGGAAGGTaGCGAATACATTCTTCCCAGCTAACAGTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: VFLLLRKVLRGR*RIHSSQLTVAE
Trigger: CTCAGCAACTGTTAGCTGGGAAGAATGTATTCGGCACCTTCCCCTGAGGACCTTTCTGAGGAGTAAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 72 bp ACCTATCAGGGAAACGACGTCTGGAGCAGTAGTGTCTaGACACAAGGTATTAATCGACGAAGACCATGCACA +
Preference number: 3 (lower is better)
Translates to: TYQGNDVWSSSV*TQGINRRRPCT
Trigger: TGTGCATGGTCTTCGTCGATTAATACCTTGTGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTGATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 72 bp GTGTTTGCTCCGACGGGAGAAGATAAAACACACTCCTaGCCTTCAAGAGAACCCAAGATTGATGATTTGGGG +
Preference number: 3 (lower is better)
Translates to: VFAPTGEDKTHS*PSREPKIDDLG
Trigger: CCCCAAATCATCAATCTTGGGTTCTCTTGAAGGGCAGGAGTGTGTTTTATCTTCTCCCGTCGGAGCAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp AGGATTGAGCCTCACATCCAAGAAAAACTCCGGTGGTaGCATCTCTACTTAACCAGAGGGAGCACTCAATTG +
Preference number: 3 (lower is better)
Translates to: RIEPHIQEKLRW*HLYLTRGSTQL
Trigger: CAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCACCGGAGTTTTTCTTGGATGTGAGGCTCAATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp AGTGAGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTaGTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCT +
Preference number: 3 (lower is better)
Translates to: SEKPKANSCVLC*WVGLGLFSSCP
Trigger: AGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAACACAGGAGTTTGCTTTTGGCTTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp GGATTCATCCTGTTGGTACACACACTCCAGTCAGGCTaGGCCTTGGGAAATACCCAGAACAAATACATTAGG +
Preference number: 3 (lower is better)
Translates to: GFILLVHTLQSG*ALGNTQNKYIR
Trigger: CCTAATGTATTTGTTCTGGGTATTTCCCAAGGCCCAGCCTGACTGGAGTGTGTGTACCAACAGGATGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp CTAGCACATGCAAGAGTGGCCAATCCGAAACCAAAATaGGGGCGTAGCTTGATTGGATTCATCCTGTTGGTA +
Preference number: 3 (lower is better)
Translates to: LAHARVANPKPK*GRSLIGFILLV
Trigger: TACCAACAGGATGAATCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATTGGCCACTCTTGCATGTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp GAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTaGAGAGTGACAGGCCCGATTTCAGCAAAAATGCTA +
Preference number: 3 (lower is better)
Translates to: ETCLALKCQNLY*RVTGPISAKML
Trigger: TAGCATTTTTGCTGAAATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp TCAGTAGTTAGGGGTGGGGGTTGGTTCAACACATTCTaGGTGCTCACTCATGAACATGCCAAAGCTATACTG +
Preference number: 3 (lower is better)
Translates to: SVVRGGGWFNTF*VLTHEHAKAIL
Trigger: CAGTATAGCTTTGGCATGTTCATGAGTGAGCACCCAGAATGTGTTGAACCAACCCCCACCCCTAACTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAGCTTCTCGGAGTCTTaGATGTTAATACTGTCAGAG +
Preference number: 3 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSFSES*MLILSE
Trigger: CTCTGACAGTATTAACATCAAAGACTCCGAGAAGCT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAGCTTCTCGGAGTCTTaGATGTTAATACTGTCAGAG +
Preference number: 3 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSFSES*MLILSE
Trigger: CTCTGACAGTATTAACATCAAAGACTCCGAGAAGCT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGAATACAACAAGGCATaGTTAGTTGTGGTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLEYNKA*LVVVGK
Trigger: TTTGCCCACCACAACTAACAATGCCTTGTTGTATTC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAAGACCTTTAGGGACTaGTCAGAAGGTATAAGTGGA +
Preference number: 3 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPKTFRD*SEGISG
Trigger: TCCACTTATACCTTCTGACAAGTCCCTAAAGGTCTT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTTGGACTGCTCATCATaGGCCTTCAAGCCACTGGGC +
Preference number: 3 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGLDCSS*AFKPLG
Trigger: GCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGAAGGCAACTTCTTGCTaGGCTAGGTTATGGAAGCTA +
Preference number: 3 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGKATSC*ARLWKL
Trigger: TAGCTTCCATAACCTAGCCAAGCAAGAAGTTGCCTT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTTTGTTTCTGTTTGTTaGTTTCAGCTCAGAAGGTGT +
Preference number: 3 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRFVSVC*FQLRRC
Trigger: ACACCTTCTGAGCTGAAACAAACAAACAGAAACAAA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCAAGAGAACCCAAGATaGATGATTTGGGGATTTTGC +
Preference number: 3 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWQENPR*MIWGFC
Trigger: GCAAAATCCCCAAATCATCAATCTTGGGTTCTCTTG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAACTCTGCAACTGTGTTaGCTCAGCTGGTCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: RALEGILGEEDNPILLAKTLQLC*LSWSWS
Trigger: GGACCAGGACCAGCTGAGCAAACACAGTTGCAGAGT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGACTCTGCAACTGTGTTaGCTCAGCTGGTCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMTLQLC*LSWSWS
Trigger: GGACCAGGACCAGCTGAGCAAACACAGTTGCAGAGT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGCACTTGAAGGCATTTaGGGTGAGGAAGACAATCCT +
Preference number: 3 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWALEGI*GEEDNP
Trigger: AGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTATTCTGCCTGCTACTaGGCCACTGTCTCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNYSACY*ATVSLP
Trigger: GGGGAGGGAGACAGTGGCCAAGTAGCAGGCAGAATA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGAATACAACAAGGCATaGTTAGTTGTGGTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTEYNKA*LVVVGK
Trigger: TTTGCCCACCACAACTAACAATGCCTTGTTGTATTC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGTCAACTCCCTCGCTaGACTGCAGTTGCTACTGGA +
Preference number: 3 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHCQLPR*TAVATG
Trigger: TCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGACA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGTCAACTCCCTCGCTaGACTGCAGTTGCTACTGGA +
Preference number: 3 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGCQLPR*TAVATG
Trigger: TCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGACA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGGGGAAGGAATTGTATaGGGACCTGCAGAACAGCAG +
Preference number: 3 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGGEGIV*GPAEQQ
Trigger: CTGCTGTTCTGCAGGTCCCAATACAATTCCTTCCCC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGGGGAAGGAATTGTATaGGGACCTGCAGAACAGCAG +
Preference number: 3 (lower is better)
Translates to: RALEGILGEEDNPILLAKGEGIV*GPAEQQ
Trigger: CTGCTGTTCTGCAGGTCCCAATACAATTCCTTCCCC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCTATACCAACTGGGATaGACCAACTCATTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWLYQLG*TNSFQS
Trigger: AGACTGGAATGAGTTGGTCAATCCCAGTTGGTATAG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGGCATGTTTCTGCTTTaGAGAAACTGCCCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKGMFLL*RNCPSL
Trigger: TAAAGAGGGGCAGTTTCTCAAAAGCAGAAACATGCC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp ACCTTTGACTTGAGCAGCAGTGATTCATTCCAGCCCTaGCAACAAGAAAATACCCCTTCCTGCACTGTCGTT +
Preference number: 3 (lower is better)
Translates to: TFDLSSSDSFQP*QQENTPSCTVV
Trigger: AACGACAGTGCAGGAAGGGGTATTTTCTTGTTGTCAGGGCTGGAATGAATCACTGCTGCTCAAGTCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp ACTGCATTTGGAGTTATCTGGAGTGATGACCCTAAATaGGAGCTCTCAGCCTGCCTTGTCAGAACAAGAGAG +
Preference number: 3 (lower is better)
Translates to: TAFGVIWSDDPK*ELSACLVRTRE
Trigger: CTCTCTTGTTCTGACAAGGCAGGCTGAGAGCTCTCATTTAGGGTCATCACTCCAGATAACTCCAAATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp AGCCATTCTGGGCCTAATTCAGGGTTACTTGGAGAGTaGGAAGCCAAAAGCAAACTCCTGTGTTCTGTGTTG +
Preference number: 3 (lower is better)
Translates to: SHSGPNSGLLGE*EAKSKLLCSVL
Trigger: CAACACAGAACACAGGAGTTTGCTTTTGGCTTCTCACTCTCCAAGTAACCCTGAATTAGGCCCAGAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp CAGGGAGTTACTAGCCCTAGGCACATGAAGAGGGCATaGTCTGCAAGTACAAACACATCCAGGTACATATTT +
Preference number: 3 (lower is better)
Translates to: QGVTSPRHMKRA*SASTNTSRYIF
Trigger: AAATATGTACCTGGATGTGTTTGTACTTGCAGAGCATGCCCTCTTCATGTGCCTAGGGCTAGTAACTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp TTGAGAACTGGCGGCATGTTTCTGCTTTTGAGAAACTaGCCCTCTTTAAGGCATGGGTATGAAGTAGCCAAG +
Preference number: 3 (lower is better)
Translates to: LRTGGMFLLLRN*PSLRHGYEVAK
Trigger: CTTGGCTACTTCATACCCATGCCTTAAAGAGGGGCAGTTTCTCAAAAGCAGAAACATGCCGCCAGTTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp TGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTaGTACCTATTTCTGGAAAGAAAACCTAGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: CWVGLGLFSSCP*YLFLERKPSGS
Trigger: TGACCCACTAGGTTTTCTTTCCAGAAATAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp GAATTCCAAGCTCCATTGGTCACTCATACATACACGTaGGCAAGCCCTGGAGTTTCTGAACATAGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: EFQAPLVTHTYT*ASPGVSEHRKR
Trigger: TCTCTTCCTATGTTCAGAAACTCCAGGGCTTGCCCACGTGTATGTATGAGTGACCAATGGAGCTTGGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp AAGCAAACTCCTGTGTTCTGTGTTGCTGGGTGGGGCTaGGATTGTTTAGTTCTTGTCCTTGCTACCTATTTC +
Preference number: 3 (lower is better)
Translates to: KQTPVFCVAGWG*DCLVLVLATYF
Trigger: GAAATAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAACACAGGAGTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp TTAGTGGGAAATTTCCTTCTGCGACAGTCATTGTCATaGAACTTTCCTGGGCTGGGAGTTCTGTCAGCCAAA +
Preference number: 3 (lower is better)
Translates to: LVGNFLLRQSLS*NFPGLGVLSAK
Trigger: TTTGGCTGACAGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTTCCCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCACGGAAGCCATCTTaGCTCTCTACTGCACGCTAT +
Preference number: 3 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSRKPS*LSTARY
Trigger: ATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAGACCATGCACAATTTaGCTTGCACAGTTAAAAGGA +
Preference number: 3 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTRPCTI*LAQLKG
Trigger: TCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTTGTCTGGCCAGAATTaGCAGATAACCATAGAACTC +
Preference number: 3 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWLSGQN*QITIEL
Trigger: GAGTTCTATGGTTATCTGCAAATTCTGGCCAGACAA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGTGACGTCAAGATGTaGTCTGGCCAGAATTTGCAG +
Preference number: 3 (lower is better)
Translates to: HDERSGDHWTANSIKFKQSDVKM*SGQNLQ
Trigger: CTGCAAATTCTGGCCAGACAACATCTTGACGTCACT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCCCAAGATTGATGATTaGGGGATTTTGCTGGTTAGT +
Preference number: 3 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWPKIDD*GILLVS
Trigger: ACTAACCAGCAAAATCCCCAAATCATCAATCTTGGG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAGAACTCCATCTTGGTaGGCCGATGATGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMRTPSW*ADDEGV
Trigger: TACTCCCTCATCATCGGCCAACCAAGATGGAGTTCT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAACAGCCAAGGTATCCTaGATGGAAGTGAAGGCATCC +
Preference number: 3 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSTAKVS*MEVKAS
Trigger: GGATGCCTTCACTTCCATCAAGGATACCTTGGCTGT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGCAAAAGTAAACTCTTaGGGTGTTGCAGGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSAKVNS*GVAGKG
Trigger: CCCCTTCCCTGCAACACCCAAAGAGTTTACTTTTGC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTAGAGTTACCTCTGCATaGGTGTTCCCCAATCACAGC +
Preference number: 3 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFRVTSA*VFPNHS
Trigger: GCTGTGATTGGGGAACACCAATGCAGAGGTAACTCT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGGCATGTTTCTGCTTTaGAGAAACTGCCCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: KFPSATVIVMELSWAGSSGMFLL*RNCPSL
Trigger: TAAAGAGGGGCAGTTTCTCAAAAGCAGAAACATGCC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp GCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTaGAAAGAAATTAGTGTCAGATATAATAGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: AAPDWAKRHERC*KEISVRYNRRK
Trigger: CTTCCTCCTATTATATCTGACACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp TCTTCCCCTATGTCTTTAGATGAACCTGGCATGGTTTaGAGGTACTACAGGCATGTGAACATAGCAGAACAC +
Preference number: 3 (lower is better)
Translates to: SSPMSLDEPGMV*RYYRHVNIAEH
Trigger: GTGTTCTGCTATGTTCACATGCCTGTAGTACCTGCAAACCATGCCAGGTTCATCTAAAGACATAGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp TTATGGATCTGCTCTACCTATCAGGGAAACGACGTCTaGAGCAGTAGTGTCTGCACACAAGGTATTAATCGA +
Preference number: 3 (lower is better)
Translates to: LWICSTYQGNDV*SSSVCTQGINR
Trigger: TCGATTAATACCTTGTGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTGATAGGTAGAGCAGATCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp GGAAACAAAAACAGCATACTGACAATGGAGTACACTTaGAATGAAACCACTCTCCCAACTAGAGCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: GNKNSILTMEYT*NETTLPTRAQS
Trigger: GCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGTGTACTCCATTGTCAGTATGCTGTTTTTGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp TTCTATACTGTTAGTTGGTGCATTCACTCTAGGATGTaGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: FYTVSWCIHSRM*EFLRVAHLAVG
Trigger: CCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp AAATGTCTGATATGTGCAGGATGCAGAACTCCATCTTaGTTGGCCGATGATGAGGGAGTAAACACAGTCTTC +
Preference number: 3 (lower is better)
Translates to: KCLICAGCRTPS*LADDEGVNTVF
Trigger: GAAGACTGTGTTTACTCCCTCATCATCGGCCAACCAAGATGGAGTTCTGCATCCTGCACATATCAGACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp AAGGAAGGCTTTCATGATGAAAGATCCGGGGATCACTaGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGG +
Preference number: 3 (lower is better)
Translates to: KEGFHDERSGDH*TANSIKFKQSW
Trigger: CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATGAAAGCCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCACACTATGCGCCATCTaGTGTCTCACGGAAGCCATC +
Preference number: 3 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPTLCAI*CLTEAI
Trigger: GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCTTTTCAACTGAAGTaGACAAAGGTTCTGTGGATA +
Preference number: 3 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSFQLK*TKVLWI
Trigger: TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAGCAATAAACTGCATTaGGAGTTATCTGGAGTGATG +
Preference number: 3 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWSNKLH*ELSGVM
Trigger: CATCACTCCAGATAACTCCAAATGCAGTTTATTGCT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGGAGACCTGCCTGGCATaGAAGTGCCAGAACCTTTAT +
Preference number: 3 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLETCLA*KCQNLY
Trigger: ATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTC...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp ACCCAACTCTCATCTCTCATAGGCCAGCATATAACTTaGATGGACGTAAGGTTTATCTTGTCAACTCCCTCG +
Preference number: 3 (lower is better)
Translates to: TQLSSLIGQHIT*MDVRFILSTPS
Trigger: CGAGGGAGTTGACAAGATAAACCTTACGTCCATTCAAGTTATATGCTGGCCTATGAGAGATGAGAGTTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp CAGACCATGAGAAAGGGGGTGGTGGAGGAACAACAATaGATAATTTCAGATATTCTGTGGCTCGTTCAGCTA +
Preference number: 3 (lower is better)
Translates to: QTMRKGVVEEQQ*IISDILWLVQL
Trigger: TAGCTGAACGAGCCACAGAATATCTGAAATTATTCATTGTTGTTCCTCCACCACCCCCTTTCTCATGGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp AACCTTCACTTTGTTATAATAGCTGCCGTAAAGGATTaGGCCTCACATCCAAGAAAAACTCCGGTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: NLHFVIIAAVKD*ASHPRKTPVVP
Trigger: TGGCACCACCGGAGTTTTTCTTGGATGTGAGGCTCAATCCTTTACGGCAGCTATTATAACAAAGTGAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp GCCTCTCTATTCCTCAGTAGTAGACTGAAGACCAAATaGCTTGCAAAAGTAAACTCTTTGGGTGTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: ASLFLSSRLKTK*LAKVNSLGVAG
Trigger: CCCTGCAACACCCAAAGAGTTTACTTTTGCAAGTCATTTGGTCTTCAGTCTACTACTGAGGAATAGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp CCAAAAGAGTCCTTAATCTTCCCCTATGTCTTTAGATaGACCTGGCATGGTTTGCAGGTACTACAGGCATGT +
Preference number: 3 (lower is better)
Translates to: PKESLIFPYVFR*TWHGLQVLQAC
Trigger: ACATGCCTGTAGTACCTGCAAACCATGCCAGGTTCATCTAAAGACATAGGGGAAGATTAAGGACTCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp ATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTaGACGCTATCATTTCTGGTGATGGGAAAAGAATCA +
Preference number: 3 (lower is better)
Translates to: ILCLTEAIFALY*TLSFLVMGKES
Trigger: TGATTCTTTTCCCATCACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 72 bp AGTGTCTGCACACAAGGTATTAATCGACGAAGACCATaGACAATTTTGCTTGCACAGTTAAAAGGACGGGTG +
Preference number: 3 (lower is better)
Translates to: SVCTQGINRRRP*TILLAQLKGRV
Trigger: CACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATTAATACCTTGTGTGCAGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATACACTATGCGCCATCTaGTGTCTCACGGAAGCCATC +
Preference number: 3 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYTLCAI*CLTEAI
Trigger: GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATTGTCTGGCCAGAATTaGCAGATAACCATAGAACTC +
Preference number: 3 (lower is better)
Translates to: HDERSGDHWTANSIKFKQLSGQN*QITIEL
Trigger: GAGTTCTATGGTTATCTGCAAATTCTGGCCAGACAA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCAGCCTTTCCCCTTATaGGTAAGACAAGGACGAAGT +
Preference number: 3 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNQPFPL*VRQGRS
Trigger: ACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAAATGGGGGCGTAGCTaGATTGGATTCATCCTGTTG +
Preference number: 3 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNKWGRS*IGFILL
Trigger: CAACAGGATGAATCCAATCAAGCTACGCCCCCATTT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAAAGGTAATTGACATGTaGCAGATAACTGGGCTGTTA +
Preference number: 3 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKKVIDM*QITGLL
Trigger: TAACAGCCCAGTTATCTGCAACATGTCAATTACCTT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTAAGAAAGCACAGGTCTaGTGTAGTATCTTGATTCCA +
Preference number: 3 (lower is better)
Translates to: KFPSATVIVMELSWAGSSKKAQV*CSILIP
Trigger: TGGAATCAAGATACTACACAAGACCTGTGCTTTCTT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTTCTGCGACAGTCATaGTCATGGAACTTTCCTGGG +
Preference number: 3 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILLRQS*SWNFPG
Trigger: CCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp TCAACTGAAGTTGACAAAGGTTCTGTGGATAGCGCTTaGGAAACAAACCAGTGCTATCATCACAACCTACGA +
Preference number: 3 (lower is better)
Translates to: STEVDKGSVDSA*ETNQCYHHNLR
Trigger: TCGTAGGTTGTGATGATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAACTTCAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp AATGGACGTAAGGTTTATCTTGTCAACTCCCTCGCTTaGCTGCAGTTGCTACTGGATTTCCTTTTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: NGRKVYLVNSLA*LQLLLDFLLFC
Trigger: ACAGAACAAAAGGAAATCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGACAAGATAAACCTTACGTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp AAGCAATTGTTTCTACCCGTTTTTCAGTCCTACCTCTaGCCATCAAAATGGACCATGGTCATTCGATTGCAC +
Preference number: 3 (lower is better)
Translates to: KQLFLPVFQSYL*PSKWTMVIRLH
Trigger: GTGCAATCGAATGACCATGGTCCATTTTGATGGTCAGAGGTAGGACTGAAAAACGGGTAGAAACAATTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp TGCTGGGATGCTTCTAGAACATCACTGATGCTTTGGTaGAATTGGACTGAAATGTCTGATATGTGCAGGATG +
Preference number: 3 (lower is better)
Translates to: CWDASRTSLMLW*NWTEMSDMCRM
Trigger: CATCCTGCACATATCAGACATTTCAGTCCAATTTCACCAAAGCATCAGTGATGTTCTAGAAGCATCCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR TCA 72 bp GATCCTCCATCTGCTGGGATGCTTCTAGAACATCACTaGTGCTTTGGTGAAATTGGACTGAAATGTCTGATA +
Preference number: 3 (lower is better)
Translates to: DPPSAGMLLEHH*CFGEIGLKCLI
Trigger: TATCAGACATTTCAGTCCAATTTCACCAAAGCATCAGTGATGTTCTAGAAGCATCCCAGCAGATGGAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp TCCCCTAATTGTATAAGTCATACCTTTTTATGGATCTaGTCTACCTATCAGGGAAACGACGTCTGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: SPNCISHTFLWI*STYQGNDVWSS
Trigger: ACTGCTCCAGACGTCGTTTCCCTGATAGGTAGAGCAGATCCATAAAAAGGTATGACTTATACAATTAGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 72 bp GAAATACCCAGAACAAATACATTAGGATCCTCCATCTaGTGGGATGCTTCTAGAACATCACTGATGCTTTGG +
Preference number: 3 (lower is better)
Translates to: EIPRTNTLGSSI*WDASRTSLMLW
Trigger: CCAAAGCATCAGTGATGTTCTAGAAGCATCCCAGCAGATGGAGGATCCTAATGTATTTGTTCTGGGTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp CTGCCTCTGGATTACAGCAAATGGTTGAACATGAAGTaGGTGAAACTCAAGGATTTGCGTTTCTTAGGAATC +
Preference number: 3 (lower is better)
Translates to: LPLDYSKWLNMK*VKLKDLRFLGI
Trigger: GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp TCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTaGATAGCGCTTGAGAAACAAACCAGTGCTATCATC +
Preference number: 3 (lower is better)
Translates to: STSFQLKLTKVL*IALEKQTSAII
Trigger: GATGATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGAATACAACAAGGCATaGTTAGTTGTGGTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGEYNKA*LVVVGK
Trigger: TTTGCCCACCACAACTAACAATGCCTTGTTGTATTC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTCAAGAACCTTTGACTaGAGCAGCAGTGATTCATTC +
Preference number: 3 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSRTFD*SSSDSF
Trigger: GAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTGA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACCCAAGATTGATGATTaGGGGATTTTGCTGGTTAGT +
Preference number: 3 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSPKIDD*GILLVS
Trigger: ACTAACCAGCAAAATCCCCAAATCATCAATCTTGGG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATATTGGATTCATCCTGTaGGTACACACACTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNIGFIL*VHTLQS
Trigger: TGACTGGAGTGTGTGTACCAACAGGATGAATCCAAT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTTGGATGTCATACTATaGATAGAGGCCTCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLDVIL*IEASLP
Trigger: TGGCAAGGAGGCCTCTATCAATAGTATGACATCCAA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCAGCCCACAGACTTTaGTTGGCTTACAAAATGTTT +
Preference number: 3 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFAAHRL*LAYKMF
Trigger: AAACATTTTGTAAGCCAACAAAAGTCTGTGGGCTGC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTAGACTGTTTGTACTTTaGTCGTCACAGAGTCAGTGT +
Preference number: 3 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFRLFVL*SSQSQC
Trigger: ACACTGACTCTGTGACGACAAAAGTACAAACAGTCT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp ATAATGCCAAAAAGAAGTCAATACTGTGTCTATGGATaGAGAAGTACACACTGCTTCCCTCGAGAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: IMPKRSQYCVYG*RSTHCFPRELL
Trigger: GAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTATTGACTTCTTTTTGGCATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp GTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTaGTTGATTCAGGACATGAGTGATGATCTTATTCTG +
Preference number: 3 (lower is better)
Translates to: VAEHIHNPRRKV*LIQDMSDDLIL
Trigger: CAGAATAAGATCATCACTCATGTCCTGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp GACGTAAGGTTTATCTTGTCAACTCCCTCGCTTGACTaGAGTTGCTACTGGATTTCCTTTTGTTCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: DVRFILSTPSLD*SCYWISFCSVN
Trigger: ATTAACAGAACAAAAGGAAATCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGACAAGATAAACCTTACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR GCA 72 bp TTGCTGATGGAATCTAGAAAAGTTTTTGTACAAATCTaGCCCTTCCTTACTGCGTCACAGAGTTCTACAGTG +
Preference number: 3 (lower is better)
Translates to: LLMESRKVFVQI*PFLTASQSSTV
Trigger: CACTGTAGAACTCTGTGACGCAGTAAGGAAGGGGCAGATTTGTACAAAAACTTTTCTAGATTCCATCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp AGAGATAATGCCAAAAAGAAGTCAATACTGTGTCTATaGATGAAGAAGTACACACTGCTTCCCTCGAGAGCT +
Preference number: 3 (lower is better)
Translates to: RDNAKKKSILCL*MKKYTLLPSRA
Trigger: AGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTATTGACTTCTTTTTGGCATTATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp GACGCTTTGAAAAGGACAGCATTCTATACTGTTAGTTaGTGCATTCACTCTAGGATGTGGGAATTCCTAAGA +
Preference number: 3 (lower is better)
Translates to: DALKRTAFYTVS*CIHSRMWEFLR
Trigger: TCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGTATAGAATGCTGTCCTTTTCAAAGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGTAGTTTTCACAAATTaGATGGAAGGCCGTATTTGG +
Preference number: 3 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHVVFTN*MEGRIW
Trigger: CCAAATACGGCCTTCCATCAAATTTGTGAAAACTAC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCAAGAGAACCCAAGATaGATGATTTGGGGATTTTGC +
Preference number: 3 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNQENPR*MIWGFC
Trigger: GCAAAATCCCCAAATCATCAATCTTGGGTTCTCTTG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTCTTTTCAACTGAAGTaGACAAAGGTTCTGTGGATA +
Preference number: 3 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSFQLK*TKVLWI
Trigger: TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCGTGACAAACCTGTGTaGGTTTTTGCTGATGGAATC +
Preference number: 3 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRDKPV*VFADGI
Trigger: GATTCCATCAGCAAAAACCAACACAGGTTTGTCACG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGCTAGAGAATTAGGTTaGTCACTGTTATACTGTTGT +
Preference number: 3 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHARELG*SLLYCC
Trigger: ACAACAGTATAACAGTGACAAACCTAATTCTCTAGC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATATCACAATATCTCAGTaGCTTGTCATCTCCTGTATT +
Preference number: 3 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHITISQ*LVISCI
Trigger: AATACAGGAGATGACAAGCAACTGAGATATTGTGAT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGCCTGATTATGACATaGGTTCAGTGTACAAGAATT +
Preference number: 3 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSLIMT*VQCTRI
Trigger: AATTCTTGTACACTGAACCAATGTCATAATCAGGCT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTTTGTTTCTGTTTGTTaGTTTCAGCTCAGAAGGTGT +
Preference number: 3 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMFVSVC*FQLRRC
Trigger: ACACCTTCTGAGCTGAAACAAACAAACAGAAACAAA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAGCAATAAACTGCATTaGGAGTTATCTGGAGTGATG +
Preference number: 3 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNSNKLH*ELSGVM
Trigger: CATCACTCCAGATAACTCCAAATGCAGTTTATTGCT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTCTGTACTAATTTCCTaGGAGTCAAGTCAGCTAAGC +
Preference number: 3 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGISVLIS*ESSQLS
Trigger: GCTTAGCTGACTTGACTCCAAGGAAATTAGTACAGA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR GCA 72 bp GCTTTGAAAAGGACAGCATTCTATACTGTTAGTTGGTaGATTCACTCTAGGATGTGGGAATTCCTAAGAGTT +
Preference number: 3 (lower is better)
Translates to: ALKRTAFYTVSW*IHSRMWEFLRV
Trigger: AACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGTATAGAATGCTGTCCTTTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CCA 72 bp TATTCAGGTGTCACTTTGAAATCAGCCAAGATGCAGTaGGTCTTAGTAAAGCAATGGACCTCAAAACAGATT +
Preference number: 3 (lower is better)
Translates to: YSGVTLKSAKMQ*VLVKQWTSKQI
Trigger: AATCTGTTTTGAGGTCCATTGCTTTACTAAGACCCACTGCATCTTGGCTGATTTCAAAGTGACACCTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGCTTCTCGGAGTCTTaGATGTTAATACTGTCAGAG +
Preference number: 3 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYSFSES*MLILSE
Trigger: CTCTGACAGTATTAACATCAAAGACTCCGAGAAGCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCAAGGTAATTGACATGTaGCAGATAACTGGGCTGTTA +
Preference number: 3 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIKVIDM*QITGLL
Trigger: TAACAGCCCAGTTATCTGCAACATGTCAATTACCTT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp TACTGCTTCATGAATGTGTTAGCATGCTTTCTTTCCTaGACTGCTTGTTTGCATATTAGAGTCTCTAGTGGA +
Preference number: 3 (lower is better)
Translates to: YCFMNVLACFLS*TACLHIRVSSG
Trigger: TCCACTAGAGACTCTAATATGCAAACAAGCAGTTCAGGAAAGAAAGCATGCTAACACATTCATGAAGCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGACCATGCACAATTTaGCTTGCACAGTTAAAAGGA +
Preference number: 3 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRPCTI*LAQLKG
Trigger: TCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGGCCAGCATATAACTaGAATGGACGTAAGGTTTAT +
Preference number: 3 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRPAYN*NGRKVY
Trigger: ATAAACCTTACGTCCATTCAAGTTATATGCTGGCCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGTCTTGTGTAGTATCTaGATTCCATTTTGCAATGGA +
Preference number: 3 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIVLCSI*IPFCNG
Trigger: TCCATTGCAAAATGGAATCAAGATACTACACAAGAC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR TCA 72 bp GCTAAAAACATGATTTTACTTCACTGTGAGTGTGCTTaGAACTGGTTTGCTAACAAATCTTCATCTCAGTGC +
Preference number: 3 (lower is better)
Translates to: AKNMILLHCECA*NWFANKSSSQC
Trigger: GCACTGAGATGAAGATTTGTTAGCAAACCAGTTTCAAGCACACTCACAGTGAAGTAAAATCATGTTTTTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp CCATATATCCAAACGATATCAGTGGTTAACTCTAACTaGTGGAATTACATGGGACTTTTCGTTTCATCTTTG +
Preference number: 3 (lower is better)
Translates to: PYIQTISVVNSN*WNYMGLFVSSL
Trigger: CAAAGATGAAACGAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAACCACTGATATCGTTTGGATATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp ACAAGACTAGAAAGCCATATATCCAAACGATATCAGTaGTTAACTCTAACTGGTGGAATTACATGGGACTTT +
Preference number: 3 (lower is better)
Translates to: TRLESHISKRYQ*LTLTGGITWDF
Trigger: AAAGTCCCATGTAATTCCACCAGTTAGAGTTAACCACTGATATCGTTTGGATATATGGCTTTCTAGTCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTCTTTTCAACTGAAGTaGACAAAGGTTCTGTGGATA +
Preference number: 3 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYSFQLK*TKVLWI
Trigger: TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR TCA 72 bp GACAGTCTTGTCTTTATTGGTATATGCGTTTGGCTCTaGATGATCAACTACATCACAAATTCCAGTACAAAA +
Preference number: 3 (lower is better)
Translates to: DSLVFIGICVWL*MINYITNSSTK
Trigger: TTTTGTACTGGAATTTGTGATGTAGTTGATCATTCAGAGCCAAACGCATATACCAATAAAGACAAGACTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR GCA 72 bp AAAGCACAGGTCTTGTGTAGTATCTTGATTCCATTTTaGAATGGAGGAATAAAAAGTCGTGTGTGTTCTAAT +
Preference number: 3 (lower is better)
Translates to: KAQVLCSILIPF*NGGIKSRVCSN
Trigger: ATTAGAACACACACGACTTTTTATTCCTCCATTGCAAAATGGAATCAAGATACTACACAAGACCTGTGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CCA 72 bp CGATATCAGTGGTTAACTCTAACTGGTGGAATTACATaGGACTTTTCGTTTCATCTTTGTTTCTTATGTTTT +
Preference number: 3 (lower is better)
Translates to: RYQWLTLTGGIT*DFSFHLCFLCF
Trigger: AAAACATAAGAAACAAAGATGAAACGAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAACCACTGATATCG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CCA 72 bp TATATCCAAACGATATCAGTGGTTAACTCTAACTGGTaGAATTACATGGGACTTTTCGTTTCATCTTTGTTT +
Preference number: 3 (lower is better)
Translates to: YIQTISVVNSNW*NYMGLFVSSLF
Trigger: AAACAAAGATGAAACGAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAACCACTGATATCGTTTGGATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGCTTTCCCCCACCCGTaGGGGGAGGCCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPAFPHP*GEAFPA
Trigger: CGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGCTTTCCCCCACCCGTaGGGGGAGGCCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRAFPHP*GEAFPA
Trigger: CGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTQCQPE*LSPRCT
Trigger: GGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGCCCTGCGCCCGCGCTaGCCGGAGCACGATATGCAT +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPALRPR*PEHDMH
Trigger: ATGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGCTACCGCCGGGGACTaGGCGCGTAGAGCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIATAGD*ARRARA
Trigger: CGCTCGCGCTCTACGCGCTCAGTCCCCGGCGGTAGC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277120.8
ENST00000323115.10
3UTR CAA 72 bp TTTGGAAACCTAGGCTCCCATTCCTGTGGGACACAGTaGGCTGCGGCTGGGGACAGTGGCCCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FGNLGSHSCGTQ*AAAGDSGPSGR
Trigger: CCTTCCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGAATGGGAGCCTAGGTTTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAATGGGGGTCCGGTATaGACCTCGAGGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRNGGPV*TSRPGS
Trigger: GGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGCTTTCCCCCACCCGTaGGGGGAGGCCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIAFPHP*GEAFPA
Trigger: CGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCTTTCCCCCACCCGTaGGGGGAGGCCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTAFPHP*GEAFPA
Trigger: CGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTGCCTGTCCCCGCGCTaGACCGGCCGCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTCLSPR*TGRFPP
Trigger: TGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCTGCCTGTCCCCGCGCTaGACCGGCCGCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPCLSPR*TGRFPP
Trigger: TGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCA...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTGCCTGTCCCCGCGCTaGACCGGCCGCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAICLSPR*TGRFPP
Trigger: TGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIQCQPE*LSPRCT
Trigger: GGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTGGGACACAGTTGGCTaGGGCTGGGGACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPWDTVG*GWGQWP
Trigger: GGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCTGGGACACAGTTGGCTaGGGCTGGGGACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTWDTVG*GWGQWP
Trigger: GGGCCACTGTCCCCAGCCGCAGCCAACTGTGTCCCA...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCCCAGAGCCGCGCCATaGCGGGTCCATGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPPRAAP*RVHATL
Trigger: TAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGACTGCGTCAGTTCCGTaGGCGGGTTGCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEETASVP*AGCPQP
Trigger: TGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGCTACCGCCGGGGACTaGGCGCGTAGAGCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLATAGD*ARRARA
Trigger: CGCTCGCGCTCTACGCGCTCAGTCCCCGGCGGTAGC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395882.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCTGGGTCCAGGCTCCTaGTACCGCCGGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLGPGS*YRRGLS
Trigger: GCTCAGTCCCCGGCGGTAGCAGGAGCCTGGACCCAG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277120.8
ENST00000323115.10
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGAATGGGGGTCCGGTATaGACCTCGAGGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLNGGPV*TSRPGS
Trigger: GGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCTCCTCGGTGCTTGTTaGGGGCGTGCCGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLLLGAC*GRAESS
Trigger: GCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEGLPCA*GSLNSS
Trigger: CGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGCTTTCCCCCACCCGTaGGGGGAGGCCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLAFPHP*GEAFPA
Trigger: CGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGCTTTCCCCCACCCGTaGGGGGAGGCCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTAFPHP*GEAFPA
Trigger: CGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGCTTTCCCCCACCCGTaGGGGGAGGCCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVAFPHP*GEAFPA
Trigger: CGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTGCCTGTCCCCGCGCTaGACCGGCCGCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVCLSPR*TGRFPP
Trigger: TGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCATCCCTAGCAGCCAGTaGCAGCCCGAGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTIPSSQ*QPECLS
Trigger: GGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGAT...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCATCCCTAGCAGCCAGTaGCAGCCCGAGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPIPSSQ*QPECLS
Trigger: GGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGAT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGCCATGGCGGGTCCATaGCACCTTATCCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPAMAGP*HLIQDD
Trigger: GTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCCTCCTGGGGGCACGTaGGGGGTCGCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTPPGGT*GVAAGL
Trigger: GAGTCCTGCAGCGACCCCGCACGTGCCCCCAGGAGG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCATGTGTGCTAGGGTGTaGGCGAACGCGTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPMCARV*ANACPA
Trigger: CGCAGGGCACGCGTTCGCGCACACCCTAGCACACAT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCGCCGCCGCCGCCTCTaGTACTGCTGGCGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWRRRRL*YCWRSD
Trigger: GTCACTTCGCCAGCAGTAGCAGAGGCGGCGGCGGCG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCGCCGCCGCCGCCTCTaGTACTGCTGGCGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPRRRRL*YCWRSD
Trigger: GTCACTTCGCCAGCAGTAGCAGAGGCGGCGGCGGCG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395882.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCATGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPCICRT*DRRKRP
Trigger: GGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCA...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEECICRT*DRRKRP
Trigger: GGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTCCTCTCAGCCCGTCTaGGGAGTACGTTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESSQPV*GVRWEG
Trigger: TCCTTCCCAACGTACTCCTCAGACGGGCTGAGAGGA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAAAGGCTCCCACGAGATaGGTCGTCAACCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPKAPTR*VVNPVC
Trigger: GCACACTGGGTTGACGACTCATCTCGTGGGAGCCTT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGCAGCAGCAGCAGGCTaGATGGTTGAGACCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPAAAAG*MVETSA
Trigger: TGCACTGGTCTCAACCATTCAGCCTGCTGCTGCTGC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGCGGGTGCAGTTAAATaGTGGCTGCGGGGCATTTGC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEAGAVK*WLRGIC
Trigger: GCAAATGCCCCGCAGCCATCATTTAACTGCACCCGC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCAGCCAGCGAGGCTCCTaGTCCAACCCAATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTSQRGS*SNPIPG
Trigger: TCCCGGAATTGGGTTGGAGCAGGAGCCTCGCTGGCT...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395882.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCTCCTCGGTGCTTGTTaGGGGCGTGCCGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPLLGAC*GRAESS
Trigger: GCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCTCCTCGGTGCTTGTTaGGGGCGTGCCGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLLGAC*GRAESS
Trigger: GCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPGLPCA*GSLNSS
Trigger: CGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCC...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTGCCTGTCCCCGCGCTaGACCGGCCGCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWCLSPR*TGRFPP
Trigger: TGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCATCCCTAGCAGCCAGTaGCAGCCCGAGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPIPSSQ*QPECLS
Trigger: GGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGAT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCAGGAGAAGGGTCGCTaGACCAGATCCGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTQEKGR*TRSERH
Trigger: GTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTCGGAAATGCCACGATaGCAGGAGAAGGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESEMPR*QEKGRC
Trigger: GCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGTTCCGTGGGCGGGTTaGCCTCAGCCATCAGCACGG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLVPWAG*PQPSAR
Trigger: CCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAAC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGATGCCCGCGGCGATCTaGTGGGCTATATGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEMPAAI*WAICSI
Trigger: GATGCTGCATATAGCCCAGCAGATCGCCGCGGGCAT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTACGCCAGGTAGACCATaGCCGCGGCGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPTPGRP*PRRSAG
Trigger: CCCAGCAGATCGCCGCGGGCATGGTCTACCTGGCGT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCCTCCTGGGGGCACGTaGGGGGTCGCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRPPGGT*GVAAGL
Trigger: GAGTCCTGCAGCGACCCCGCACGTGCCCCCAGGAGG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCGGCAGGGTTCACAGTaGCCCCGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIRQGSQ*PRHSEP
Trigger: CGGTTCGCTATGCCGGGGCCACTGTGAACCCTGCCG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCGGCAGGGTTCACAGTaGCCCCGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWRQGSQ*PRHSEP
Trigger: CGGTTCGCTATGCCGGGGCCACTGTGAACCCTGCCG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCCCAGAGCCGCGCCATaGCGGGTCCATGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIPRAAP*RVHATL
Trigger: TAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCTGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTCICRT*DRRKRP
Trigger: GGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCA...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRCICRT*DRRKRP
Trigger: GGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAGCTCATACACCTCCTaGGGGCACGTGCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISSYTS*GHVRGR
Trigger: GCGACCCCGCACGTGCCCCCAGGAGGTGTATGAGCT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGAAGCCCAGCTACGGTaGTTACTCTCACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPEAQLR*LLSQAG
Trigger: GCCAGCCTGTGAGAGTAACCACCGTAGCTGGGCTTC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATGCGGCTGGGGACAGTaGCCCCTCTGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLCGWGQ*PLWKGR
Trigger: CCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCACAGTTGGCTGCGGCTaGGGACAGTGGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPTVGCG*GQWPLW
Trigger: CCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCTGGCAGCACCTGACTaGGCCAAGAGACATGAGCGC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTLAAPD*AKRHER
Trigger: GCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCAG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTGCAGGACTCGGCCCTaGGTGATACACTCTATCACC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEECRTRP*VIHSIT
Trigger: GGTGATAGAGTGTATCACTCAGGGCCGAGTCCTGCA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGGGACTGACACCAGCTaGTCCCAGTGGTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEGTDTS*SQWLSL
Trigger: CAAAGACAACCACTGGGATCAGCTGGTGTCAGTCCC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTGGGTTCGACGTGGATaGGGATTTCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEWVRRG*GFPGFR
Trigger: CCTGAAGCCTGGAAATCCTCATCCACGTCGAACCCA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCACTAGCCCTAGGCACATaGAGAGGGCATGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPLALGT*RGHALQ
Trigger: TTGCAGAGCATGCCCTCTTCATGTGCCTAGGGCTAG...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTCCGGGAGGGTCGGGTaGCAAACCGTAACTATTCTG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESGRVG*QTVTIL
Trigger: CAGAATAGTTACGGTTTGTCACCCGACCCTCCCGGA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGCTGGCGAAGTGACGTaGGGGCTGACGCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLAGEVT*GLTQSR
Trigger: CCTGCTCTGCGTCAGCCCTCACGTCACTTCGCCAGC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCTCCTCGGTGCTTGTTaGGGGCGTGCCGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLLGAC*GRAESS
Trigger: GCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACTCCTCGGTGCTTGTTaGGGGCGTGCCGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLLLGAC*GRAESS
Trigger: GCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGATCCCTAGCAGCCAGTaGCAGCCCGAGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTIPSSQ*QPECLS
Trigger: GGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGAT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTCGGAAATGCCACGATaGCAGGAGAAGGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRSEMPR*QEKGRC
Trigger: GCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTCGGAAATGCCACGATaGCAGGAGAAGGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPSEMPR*QEKGRC
Trigger: GCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCTCGGAAATGCCACGATaGCAGGAGAAGGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTSEMPR*QEKGRC
Trigger: GCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGA...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTGCAGCATCTGCGACTaGGTCAGTTCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAICSICD*VSSVGG
Trigger: CCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGTGGCCAAATCGCGGTaGACGAAGTGCTGGGACGCC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIVAKSR*TKCWDA
Trigger: GGCGTCCCAGCACTTCGTGCACCGCGATTTGGCCAC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGTGGCCAAATCGCGGTaGACGAAGTGCTGGGACGCC +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPVAKSR*TKCWDA
Trigger: GGCGTCCCAGCACTTCGTGCACCGCGATTTGGCCAC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGATCTCCTCCTCGGGCTaGTCTCTCAGTCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRISSSG*SLSLRG
Trigger: CCCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGAT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGCCCGGAGCACGATATaGATCCAGCTACGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEARSTI*IQLRRS
Trigger: GCTTCTTCGTAGCTGGATGCATATCGTGCTCCGGGC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGCCCTGCGCCCGCGCTaGCCGGAGCACGATATGCAT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKALRPR*PEHDMH
Trigger: ATGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCCCAGAGCCGCGCCATaGCGGGTCCATGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTPRAAP*RVHATL
Trigger: TAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGCCCAGAGCCGCGCCATaGCGGGTCCATGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVPRAAP*RVHATL
Trigger: TAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGG...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCTACCGCCGGGGACTaGGCGCGTAGAGCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGATAGD*ARRARA
Trigger: CGCTCGCGCTCTACGCGCTCAGTCCCCGGCGGTAGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277120.8
ENST00000323115.10
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGCTACCGCCGGGGACTaGGCGCGTAGAGCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKATAGD*ARRARA
Trigger: CGCTCGCGCTCTACGCGCTCAGTCCCCGGCGGTAGC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCTCCCATTGGAGATGTaGTGGAGTGGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPLPLEM*WSGLAE
Trigger: CTCTGCCAGCCCACTCCATCACATCTCCAATGGGAG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTTCCTAAGTAGGGACTaGCACCAGCTGATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEFLSRD*HQLIPV
Trigger: CACTGGGATCAGCTGGTGTCAGTCCCTACTTAGGAA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGTCAACTCCCTCGCTTaGCTGCAGTTGCTACTGGAT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEVNSLA*LQLLLD
Trigger: ATCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGAC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCACTTCCAGTTAGGGGCTaGGTCCAAGGAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPLPVRG*VQGERF
Trigger: GAATCTCTCTCCTTGGACTCAGCCCCTAACTGGAAG...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGCAGCAGCAGCAGGCTaGATGGTTGAGACCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLAAAAG*MVETSA
Trigger: TGCACTGGTCTCAACCATTCAGCCTGCTGCTGCTGC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTCCGGGAGGGTCGGGTaGCAAACCGTAACTATTCTG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPSGRVG*QTVTIL
Trigger: CAGAATAGTTACGGTTTGTCACCCGACCCTCCCGGA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTCTAGCTCAGCAGCCTaGGAGGGTCTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVSSSAA*EGLWRP
Trigger: GGGCCTCCAGAGACCCTCTCAGGCTGCTGAGCTAGA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAGCCAGCGAGGCTCCTaGTCCAACCCAATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISQRGS*SNPIPG
Trigger: TCCCGGAATTGGGTTGGAGCAGGAGCCTCGCTGGCT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277120.8
ENST00000323115.10
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTGCTTGTTGCGGGCGTaGCGAGTCCAGCTTATCAGA +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPCLLRA*RVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLGLPCA*GSLNSS
Trigger: CGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLERHCI*RTWDRR
Trigger: TCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCAGGAGAAGGGTCGCTaGACCAGATCCGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPQEKGR*TRSERH
Trigger: GTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCAGGAGAAGGGTCGCTaGACCAGATCCGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTQEKGR*TRSERH
Trigger: GTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTCGGAAATGCCACGATaGCAGGAGAAGGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLSEMPR*QEKGRC
Trigger: GCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCACGGTGGAAGTCCTTaGGTGCATTGTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEHGGSP*VHCHWH
Trigger: ATGCCAGTGACAATGCACGCAAGGACTTCCACCGTG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGACGCCAGGTAGACCATaGCCGCGGCGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRTPGRP*PRRSAG
Trigger: CCCAGCAGATCGCCGCGGGCATGGTCTACCTGGCGT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCAGGTAGACCGGAGATaGCTTGGCCAAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEQVDRR*LGQVLK
Trigger: CTTCAGAACTTGGCCAAGGCATCTCCGGTCTACCTG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGTCCTCAGGGGAAGGTaGCGAATACATTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEVLRGR*RIHSSQ
Trigger: CTGGGAAGAATGTATTCGGCACCTTCCCCTGAGGAC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCGCAGCCCAACATGGTaGAGCAGCAGCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLRSPTW*SSSRLN
Trigger: ATTCAGCCTGCTGCTGCTGCACCATGTTGGGCTGCG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGCCCTGCGCCCGCGCTaGCCGGAGCACGATATGCAT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSALRPR*PEHDMH
Trigger: ATGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEYQRLS*SGAKSV
Trigger: AACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCCCGCGGCGATCTGCTaGGCTATATGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPPAAIC*AICSIC
Trigger: GCAGATGCTGCATATAGCCCAGCAGATCGCCGCGGG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGAAGGACGGGTGGGCATaGAAGTTAGGGGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLKDGWA*KLGVGG
Trigger: CCCTCCGACCCCTAACTTCCATGCCCACCCGTCCTT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCCTGTGGGTTCGACGTaGATGAGGATTTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEPVGST*MRISRL
Trigger: AAGCCTGGAAATCCTCATCCACGTCGAACCCACAGG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTTCCAGTGCTTGGTCTaGGCACAGCCTCCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTFQCLV*AQPPVG
Trigger: GCCAACGGGAGGCTGTGCCCAGACCAAGCACTGGAA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCACACTTCCAGTGCTTaGTCTGGGCACAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTHTSSA*SGHSLP
Trigger: CGGGAGGCTGTGCCCAGACCAAGCACTGGAAGTGTG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGGACGAAGTGGGCTGTaGCTGTTGAGGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLGRSGL*LLRGAE
Trigger: TTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGAAGCCCAGCTACGGTaGTTACTCTCACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLEAQLR*LLSQAG
Trigger: GCCAGCCTGTGAGAGTAACCACCGTAGCTGGGCTTC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCCACCTCTTTGCTGCTaGGGTCAGGACAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPPPLCC*GQDKLS
Trigger: GGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCAGGGTCACAGCATGGTaGGAATCACAGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTRVTAW*ESQERS
Trigger: GCTCCTCTCCTGTGATTCCCACCATGCTGTGACCCT...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGGACCAACCAGGGAATaGGTTGAGGGGAGACATTGG +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTGPTRE*VEGRHW
Trigger: CCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCAGCTTATCAGAGGCTaGGCTGGTCCGGAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIQLIRG*AGPERR
Trigger: TCTTCGCTCCGGACCAGCTCAGCCTCTGATAAGCTG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEGQPMK*AEICFS
Trigger: TGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCCTTGGCCAAGTTCTaGAGGAGGGTATGGATGCCC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTALAKF*RRVWMP
Trigger: GGGCATCCATACCCTCCTTCAGAACTTGGCCAAGGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGCCTTGGCCAAGTTCTaGAGGAGGGTATGGATGCCC +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLALAKF*RRVWMP
Trigger: GGGCATCCATACCCTCCTTCAGAACTTGGCCAAGGC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTCCTCTCAGCCCGTCTaGGGAGTACGTTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSSQPV*GVRWEG
Trigger: TCCTTCCCAACGTACTCCTCAGACGGGCTGAGAGGA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCTTGGCTTTCCCACCTaGCCCCGAAATGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLGFPT*PRNELW
Trigger: CCAGAGCTCATTTCGGGGTCAGGTGGGAAAGCCAAG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGCCAGACATGCAGCGTaGCAAACCTGTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEARHAA*QTCVGF
Trigger: AAAACCAACACAGGTTTGTCACGCTGCATGTCTGGC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGCTAGGTCTAGAGGCCTaGGACATCAGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLLGLEA*DIRRGR
Trigger: CCTTCCTCTCCTGATGTCTCAGGCCTCTAGACCTAG...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTTGAGACCAGTGCAATaGGGTGGCAGGAAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPLRPVQ*GGRKCP
Trigger: AGGGCACTTCCTGCCACCTCATTGCACTGGTCTCAA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGTCCGCTCCCTTGCATaGAATGTGGGAGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRVRSLA*NVGEGN
Trigger: ATTTCCCTCTCCCACATTTCATGCAAGGGAGCGGAC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTCCGGGAGGGTCGGGTaGCAAACCGTAACTATTCTG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLSGRVG*QTVTIL
Trigger: CAGAATAGTTACGGTTTGTCACCCGACCCTCCCGGA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGGLPCA*GSLNSS
Trigger: CGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGCCTGTCCCCGCGCTaGACCGGCCGCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHCLSPR*TGRFPP
Trigger: TGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATGCCTGTCCCCGCGCTaGACCGGCCGCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPCLSPR*TGRFPP
Trigger: TGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPQCQPE*LSPRCT
Trigger: GGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMQCQPE*LSPRCT
Trigger: GGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHQCQPE*LSPRCT
Trigger: GGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGCCATGGCGGGTCCATaGCACCTTATCCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTAMAGP*HLIQDD
Trigger: GTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGA +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLERHCI*RTWDRR
Trigger: TCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPERHCI*RTWDRR
Trigger: TCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTCGGAAATGCCACGATaGCAGGAGAAGGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLSEMPR*QEKGRC
Trigger: GCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCACAGTGAGGTTAGGTaGGGCCAGATTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPHSEVR*GQICRW
Trigger: CCATCTGCAAATCTGGCCGCACCTAACCTCACTGTG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGGCATCAGGGCCGTGTaGCCTGAGGAACTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLGIRAV*PEELVE
Trigger: CTCAACAAGTTCCTCAGGGCACACGGCCCTGATGCC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCATGCCCGCGGCGATCTaGTGGGCTATATGCAGCATC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIMPAAI*WAICSI
Trigger: GATGCTGCATATAGCCCAGCAGATCGCCGCGGGCAT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGATGTGGGGCTCTCGCTaGCAGCACCCCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRMWGSR*QHPSIS
Trigger: GCTGATGCTGGGGTGCTGGCAGCGAGAGCCCCACAT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGACTCCCTCGCTTGACTaGAGTTGCTACTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEETPSLD*SCYWIS
Trigger: GGAAATCCAGTAGCAACTGCAGTCAAGCGAGGGAGT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCTGCCCCTTCCTTACTaGGTCACAGAGTTCTACAGT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEELPLPY*VTEFYS
Trigger: ACTGTAGAACTCTGTGACGCAGTAAGGAAGGGGCAG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGGAATTCCTAAGAGTTaGTCATCTCGCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEGIPKS*SSRCGV
Trigger: GACCCCACAGCGAGATGAGCAACTCTTAGGAATTCC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGCCCGGAGCACGATATaGATCCAGCTACGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLARSTI*IQLRRS
Trigger: GCTTCTTCGTAGCTGGATGCATATCGTGCTCCGGGC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGATGTGTGCTAGGGTGTaGGCGAACGCGTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWMCARV*ANACPA
Trigger: CGCAGGGCACGCGTTCGCGCACACCCTAGCACACAT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCGAGGGGAGACATTGGTaGAGAATTCCCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPEGRHW*RIPSKG
Trigger: CCCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTC...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCTCTGTCTGAGGAGATaGTCCAAGCCTCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPLCLRR*SKPQPF
Trigger: GAATGGCTGAGGCTTGGAGCATCTCCTCAGACAGAG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCGGCTTCCCTCCATTATaGTCTCTCTCGCACCTGGCG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPGFPPL*SLSHLA
Trigger: CGCCAGGTGCGAGAGAGAGCATAATGGAGGGAAGCC...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGCCCATGTGGCTGGATaGACCAACCCTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVAHVAG*TNPERP
Trigger: GGGTCTCTCAGGGTTGGTGCATCCAGCCACATGGGC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGCCCATGTGGCTGGATaGACCAACCCTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLAHVAG*TNPERP
Trigger: GGGTCTCTCAGGGTTGGTGCATCCAGCCACATGGGC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCAGATGTGACTGGCCCTaGCCATGTGGCTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPRCDWP*PCGWMH
Trigger: GTGCATCCAGCCACATGGGCAGGGCCAGTCACATCT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCTCAAGTCAGCTAAGCTaGGCAACTCCAAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTSSQLS*ATPRAL
Trigger: CAGAGCCCTTGGAGTTGCGCAGCTTAGCTGACTTGA...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPLVRCE*GSGMHL
Trigger: GAGGTGCATACCGGACCCCCATTCGCATCTAACAAG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGCTCCCGGGACTCTCTaGGGCGCAGATTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPAPGTL*GADSLL
Trigger: TAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVCICRT*DRRKRP
Trigger: GGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGTGGGATTATCCAGCTaGAGGCAGCCGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIVGLSS*RQPWYS
Trigger: GGAGTACCACGGCTGCCTCCAGCTGGATAATCCCAC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTGTGATGGAGTGGGCTaGCAGAGTCATCATCATTGC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEECDGVG*QSHHHC
Trigger: GCAATGATGATGACTCTGCCAGCCCACTCCATCACA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGAGTGTTACTCCCATTaGAGATGTGATGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEECYSH*RCDGVG
Trigger: GCCCACTCCATCACATCTCCAATGGGAGTAACACTC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTGCGTGCATTGTCACTaGCATCCTTCAGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEECVHCH*HPSGSS
Trigger: TGAAGACCCTGAAGGATGCCAGTGACAATGCACGCA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTCCCCCGAGATTAGCTaGCCAGACATGCAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSPEIS*PDMQRD
Trigger: GTCACGCTGCATGTCTGGCCAGCTAATCTCGGGGGA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCATTATCAGGCGGTCTTaGGGGAACCTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLIIRRS*GNLWAM
Trigger: CATGGCCCAGAGGTTCCCCCAAGACCGCCTGATAAT...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGATTATCAGGCGGTCTTaGGGGAACCTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLIIRRS*GNLWAM
Trigger: CATGGCCCAGAGGTTCCCCCAAGACCGCCTGATAAT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCATTCTGCCTGCTACTTaGCCACTGTCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLILPAT*PLSPSP
Trigger: TGGGGAGGGAGACAGTGGCCAAGTAGCAGGCAGAAT...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCGGACCTCCCCACATTaGGGGCCAGCTGCCCTTACA +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKRTSPH*GPAALT
Trigger: TGTAAGGGCAGCTGGCCCCCAATGTGGGGAGGTCCG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCCTGTGGGACACAGTTaGCTGCGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKPVGHS*LRLGTV
Trigger: CACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTCCTGTGGGACACAGTTaGCTGCGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLPVGHS*LRLGTV
Trigger: CACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGG...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGTTAGGGGTGGGGGTTaGTTCAACACATTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTVRGGG*FNTFWV
Trigger: CACCCAGAATGTGTTGAACCAACCCCCACCCCTAAC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp TGCTCATCTCGCTGTGGGGTCTTGGACTGCTCATCATaGGCCTTCAAGCCACTGGGCTGCCAACATTCCAAT +
Preference number: 4 (lower is better)
Translates to: CSSRCGVLDCSS*AFKPLGCQHSN
Trigger: ATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTCCCCATTGTTCATGTaGGTGGGATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRSPLFM*VGLSSW
Trigger: CCAGCTGGATAATCCCACTCACATGAACAATGGGGA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCTCCCATTGGAGATGTaGTGGAGTGGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLPLEM*WSGLAE
Trigger: CTCTGCCAGCCCACTCCATCACATCTCCAATGGGAG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTGTCGCTTGATGTGCTaGACAAATGTGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEECRLMC*TNVSGL
Trigger: CAAGCCAGACACATTTGTTCAGCACATCAAGCGACA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGGGACTGACACCAGCTaGTCCCAGTGGTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLGTDTS*SQWLSL
Trigger: CAAAGACAACCACTGGGATCAGCTGGTGTCAGTCCC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGTGATGCCCTCAGGGTaGGGTTTCCTTTCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIVMPSG*GFLSLR
Trigger: CCTAAGGGAAAGGAAACCTCACCCTGAGGGCATCAC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGTGATGCCCTCAGGGTaGGGTTTCCTTTCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTVMPSG*GFLSLR
Trigger: CCTAAGGGAAAGGAAACCTCACCCTGAGGGCATCAC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGAGCCTCTCATTTCCTaGGTCTTTCCAGCGCATAAC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQREPLIS*VFPAHN
Trigger: GTTATGCGCTGGAAAGACTCAGGAAATGAGAGGCTC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGCATACTCGGCTCTTTaGAAGGAGCTAGCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPAYSAL*KELARV
Trigger: CACCCTAGCTAGCTCCTTTCAAAGAGCCGAGTATGC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCTAGTGGGTCAGAAATaGAATCAGTCCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPLVGQK*NQSLLG
Trigger: TCCCAGCAGGGACTGATTTCATTTCTGACCCACTAG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATACTCCACACACCCCTaGAGAGGTGTCGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLYSTHP*RGVASA
Trigger: AGCAGAGGCGACACCTCTTCAGGGGTGTGTGGAGTA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEERFLVR*EWGSGM
Trigger: CATACCGGACCCCCATTCGCATCTAACAAGGAATCT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKGLPCA*GSLNSS
Trigger: CGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIQCQPE*LSPRCT
Trigger: GGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCAGGAGAAGGGTCGCTaGACCAGATCCGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWQEKGR*TRSERH
Trigger: GTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCGGAAATGCCACGATaGCAGGAGAAGGGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSEMPR*QEKGRC
Trigger: GCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCACCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPPQLGI*RFARGI
Trigger: TATTCCCCTGGCAAACCTGCAGATACCCAATTGTGG...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEERCGQI*RWQTTI
Trigger: AATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGGCATCAGGGCCGTGTaGCCTGAGGAACTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTGIRAV*PEELVE
Trigger: CTCAACAAGTTCCTCAGGGCACACGGCCCTGATGCC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTATGCCCGCGGCGATCTaGTGGGCTATATGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTMPAAI*WAICSI
Trigger: GATGCTGCATATAGCCCAGCAGATCGCCGCGGGCAT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACCTCCTGGGGGCACGTaGGGGGTCGCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIPPGGT*GVAAGL
Trigger: GAGTCCTGCAGCGACCCCGCACGTGCCCCCAGGAGG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGAAGCACACTTCCAGTaGTTGGTCTGGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPEAHFQ*LVWAQP
Trigger: AGGCTGTGCCCAGACCAAGCACTGGAAGTGTGCTTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCATACTTTACATGCCTCTaGCACAGGGAGTTACTAGCC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPYFTCL*HRELLA
Trigger: GGCTAGTAACTCCCTGTGGCAGAGGCATGTAAAGTA...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCTCTGCAACTGTGTTTaGTCAGCTGGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLLCNCV*SAGPGP
Trigger: TGGACCAGGACCAGCTGAGCAAACACAGTTGCAGAG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGAGGGCAGTGGCTCTTaGTTCCAGTTAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGEGSGS*FQLGAE
Trigger: CTCAGCCCCTAACTGGAAGCAAGAGCCACTGCCCTC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTATGTGTGCTAGGGTGTaGGCGAACGCGTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSMCARV*ANACPA
Trigger: CGCAGGGCACGCGTTCGCGCACACCCTAGCACACAT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGCTATGGCGTCTGTGTaGATGTCTAACTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTAMASV*MSNCQS
Trigger: GCTCTGACAGTTAGACATGCACACAGACGCCATAGC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCACATTGGGGGCCAGCTaGCCTTACATTCAAATGGAG +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTTLGAS*PYIQME
Trigger: CTCCATTTGAATGTAAGGGCAGCTGGCCCCCAATGT...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGGCTTCCCTCCATTATaGTCTCTCTCGCACCTGGCG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLGFPPL*SLSHLA
Trigger: CGCCAGGTGCGAGAGAGAGCATAATGGAGGGAAGCC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGAGATGTGACTGGCCCTaGCCATGTGGCTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVRCDWP*PCGWMH
Trigger: GTGCATCCAGCCACATGGGCAGGGCCAGTCACATCT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTC +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLLVRCE*GSGMHL
Trigger: GAGGTGCATACCGGACCCCCATTCGCATCTAACAAG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGCTCCCGGGACTCTCTaGGGCGCAGATTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGAPGTL*GADSLL
Trigger: TAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGCCTTTCACAGTGAATaGAATGCACCAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTAFHSE*NAPVVV
Trigger: GACCACCACTGGTGCATTCCATTCACTGTGAAAGGC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPEPLKR*FGVAFH
Trigger: GTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGTGGGATTATCCAGCTaGAGGCAGCCGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVVGLSS*RQPWYS
Trigger: GGAGTACCACGGCTGCCTCCAGCTGGATAATCCCAC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCACATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPHCSCE*DYPAGG
Trigger: GCCTCCAGCTGGATAATCCCACTCACATGAACAATG...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGGAGATGTGATGGAGTaGGCTGGCAGAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLGDVME*AGRVII
Trigger: GATGATGACTCTGCCAGCCCACTCCATCACATCTCC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGATGTTCTTCCTCATGTaGGGCTCTCGCTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLMFFLM*GSRCQH
Trigger: GTGCTGGCAGCGAGAGCCCCACATGAGGAAGAACAT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAGGAGAGCAGCTTGGTaGCCTCCAGCGGCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIRRAAW*PPAAVK
Trigger: TTTAACTGCCGCTGGAGGCCACCAAGCTGCTCTCCT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAAGGACGGGTGGGCATaGAAGTTAGGGGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRKDGWA*KLGVGG
Trigger: CCCTCCGACCCCTAACTTCCATGCCCACCCGTCCTT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCACACTTCCAGTGCTTaGTCTGGGCACAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRHTSSA*SGHSLP
Trigger: CGGGAGGCTGTGCCCAGACCAAGCACTGGAAGTGTG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCCCCCGAGATTAGCTaGCCAGACATGCAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSPEIS*PDMQRD
Trigger: GTCACGCTGCATGTCTGGCCAGCTAATCTCGGGGGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCTCGCTGTGGGGTCTTaGACTGCTCATCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLLAVGS*TAHHWP
Trigger: AGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTCTGGGCCATGTGTCTaGCTTGAGCTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLSGPCV*LELTVG
Trigger: ACCAACAGTCAGCTCAAGCCAGACACATGGCCCAGA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCATGCTTGGCTAGGTTATaGAAGCTAAGGAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPCLARL*KLRSDV
Trigger: GACGTCACTCCTTAGCTTCCATAACCTAGCCAAGCA...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTCCCCATTTCCTTCCTaGCCGTGGGTTAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRSPFPS*PWVRES
Trigger: ACTTTCTCTAACCCACGGCCAGGAAGGAAATGGGGA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAGATCCGGGGATCACTaGACAGCAAACTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRRSGDH*TANSIK
Trigger: CTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCAATGGAAACCGTGCTTaGTTCAGCTCTTGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTNGNRA*FSSCAC
Trigger: ACACGCGCAAGAGCTGAACCAAGCACGGTTTCCATT...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGGAGTCCAGCTTACATaGCAGCATCAACCAACAAGC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTGVQLT*QHQPTS
Trigger: GCTTGTTGGTTGATGCTGCCATGTAAGCTGGACTCC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTGCGGCTGGGGACAGTaGCCCCTCTGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFCGWGQ*PLWKGR
Trigger: CCTGCCCTTCCAGAGGGGCCACTGTCCCCAGCCGCA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAACTGGCCCTGCCCATGTaGCTGGATGCACCAACCCTG +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKLALPM*LDAPTL
Trigger: CAGGGTTGGTGCATCCAGCCACATGGGCAGGGCCAG...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGGAACTTTCCTGGGCTaGGAGTTCTGTCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTGTFLG*EFCQPN
Trigger: ATTTGGCTGACAGAACTCCCAGCCCAGGAAAGTTCC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCGCCTCTGCTACTGCTaGCGAAGTGACGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKRLCYC*RSDVRA
Trigger: AGCCCTCACGTCACTTCGCCAGCAGTAGCAGAGGCG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395882.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTAPVVV*GWRFEK
Trigger: TTTCTCGAATCTCCAACCTCAGACCACCACTGGTGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLGQPMK*AEICFS
Trigger: TGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCTCCCATTGGAGATGTaGTGGAGTGGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRLPLEM*WSGLAE
Trigger: CTCTGCCAGCCCACTCCATCACATCTCCAATGGGAG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGTGTCTGGCTTGAGCTaGCTGTTGGTGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLVSGLS*LLVMPK
Trigger: CTTTGGCATCACCAACAGTCAGCTCAAGCCAGACAC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGGACTCGGCCCTGAGTaGTACACTCTATCACCTCAT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPGLGPE*YTLSPH
Trigger: ATGAGGTGATAGAGTGTATCACTCAGGGCCGAGTCC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGGACTCGGCCCTGAGTaGTACACTCTATCACCTCAT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLGLGPE*YTLSPH
Trigger: ATGAGGTGATAGAGTGTATCACTCAGGGCCGAGTCC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGGGTATGGATGCCCTTaGTGTTCTTCCTCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPGYGCP*CSSSCG
Trigger: CCCACATGAGGAAGAACATCAAGGGCATCCATACCC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTCTGTGGATAGCGCTTaGGAAACAAACCAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESVDSA*ETNQCY
Trigger: ATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCACCTGACCCCGAAATaGGCTCTGGACATGAATCCA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIHLTPK*ALDMNP
Trigger: TGGATTCATGTCCAGAGCTCATTTCGGGGTCAGGTG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTGGGTTCGACGTGGATaGGGATTTCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTWVRRG*GFPGFR
Trigger: CCTGAAGCCTGGAAATCCTCATCCACGTCGAACCCA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGTCAACTCCCTCGCTTaGCTGCAGTTGCTACTGGAT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLVNSLA*LQLLLD
Trigger: ATCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGAC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGTCAACTCCCTCGCTTaGCTGCAGTTGCTACTGGAT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPVNSLA*LQLLLD
Trigger: ATCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGAC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGTAAAGGGGTCACAGTaGGACAGAGACAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLVKGSQ*DRDKVS
Trigger: GCTCACCTTGTCTCTGTCTCACTGTGACCCCTTTAC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGTAAAGGGGTCACAGTaGGACAGAGACAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIVKGSQ*DRDKVS
Trigger: GCTCACCTTGTCTCTGTCTCACTGTGACCCCTTTAC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGGGAAGCAAGAGAATTaGGGGTATGTGTGTATATGC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEGKQEN*GYVCIC
Trigger: GCATATACACACATACCCTCAATTCTCTTGCTTCCC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTGGTGGTGGTTGTTGTaGAATTCACAGTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEWWWLL*NSQCFA
Trigger: GGCAAAACACTGTGAATTTCACAACAACCACCACCA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGACCTCTGCGGTTCTGTaGAAAATATCACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLTSAVL*KISPPA
Trigger: GGCTGGAGGTGATATTTTTCACAGAACCGCAGAGGT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGCGGGTGCAGTTAAATaGTGGCTGCGGGGCATTTGC +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWAGAVK*WLRGIC
Trigger: GCAAATGCCCCGCAGCCATCATTTAACTGCACCCGC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACTCGAGGCTCTAAGATaGACCGTTCCTCCGTTCGAC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLLEALR*TVPPFD
Trigger: GTCGAACGGAGGAACGGTTCATCTTAGAGCCTCGAG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359847.4
CDS-3UTR TCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCGTTAGGAGGAAAACTTaGGAACTGGCGGCATGTTTC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPVRRKT*ELAACF
Trigger: GAAACATGCCGCCAGTTCTCAAGTTTTCCTCCTAAC...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGCAAAGGGAGACAGCTaGGGGTCACAGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKAKGDS*GSQHGG
Trigger: CCCACCATGCTGTGACCCTCAGCTGTCTCCCTTTGC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCTGGGCCAAGAGACATaGGCGCTGTTGAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPLGQET*ALLKRN
Trigger: ATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCTCTCGCACCTGGCGTaGAACTGGTTTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPLSHLA*NWFSVF
Trigger: GAAGACAGAAAACCAGTTTCACGCCAGGTGCGAGAG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAATGGGGGTCCGGTATaGACCTCGAGGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGNGGPV*TSRPGS
Trigger: GGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277120.8
ENST00000323115.10
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCTCTTAACTCCTCGGTaGTTGTTGCGGGCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRLLTPR*LLRACR
Trigger: TCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGQCQPE*LSPRCT
Trigger: GGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRERHCI*RTWDRR
Trigger: TCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLERHCI*RTWDRR
Trigger: TCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLQSRK*HDARRR
Trigger: CCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLQSRK*HDARRR
Trigger: CCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPPQLGI*RFARGI
Trigger: TATTCCCCTGGCAAACCTGCAGATACCCAATTGTGG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATT +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRRCGQI*RWQTTI
Trigger: AATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATT +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPRCGQI*RWQTTI
Trigger: AATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCACAGTGAGGTTAGGTaGGGCCAGATTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPHSEVR*GQICRW
Trigger: CCATCTGCAAATCTGGCCGCACCTAACCTCACTGTG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCACAGTGAGGTTAGGTaGGGCCAGATTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPHSEVR*GQICRW
Trigger: CCATCTGCAAATCTGGCCGCACCTAACCTCACTGTG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCACGGTGGAAGTCCTTaGGTGCATTGTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLHGGSP*VHCHWH
Trigger: ATGCCAGTGACAATGCACGCAAGGACTTCCACCGTG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTGACGATGTGCTCATaGTGGAGGTTGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAILTMCS*WRLVRS
Trigger: GCTCCTGACCAACCTCCAGCATGAGCACATCGTCAA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGTTCCGTGGGCGGGTTaGCCTCAGCCATCAGCACGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHVPWAG*PQPSAR
Trigger: CCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAAC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCTATATGCAGCATCTaGGACTGCGTCAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTAICSI*DCVSSV
Trigger: CACGGAACTGACGCAGTCGCAGATGCTGCATATAGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTATCTGCTGGGCTATATaGAGCATCTGCGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPICWAI*SICDCV
Trigger: GACGCAGTCGCAGATGCTGCATATAGCCCAGCAGAT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCAGGTAGACCGGAGATaGCTTGGCCAAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIQVDRR*LGQVLK
Trigger: CTTCAGAACTTGGCCAAGGCATCTCCGGTCTACCTG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTGTCCGAGCACACTATaGGCCATCTTGTGTCTCACG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTCPSTL*AILCLT
Trigger: CGTGAGACACAAGATGGCGCATAGTGTGCTCGGACA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGAAGCACACTTCCAGTaGTTGGTCTGGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTEAHFQ*LVWAQP
Trigger: AGGCTGTGCCCAGACCAAGCACTGGAAGTGTGCTTC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGGAAAGGCAACTTCTTaGTTGGCTAGGTTATGGAAG +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPGKATS*LARLWK
Trigger: CTTCCATAACCTAGCCAAGCAAGAAGTTGCCTTTCC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGATAAAACACACTCCTaGCCTTCAAGAGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPDKTHS*PSREPK
Trigger: CTTGGGTTCTCTTGAAGGGCAGGAGTGTGTTTTATC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGAAGAGGGCATGCTCTaGAAGTACAAACACATCCAG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQREEGML*KYKHIQ
Trigger: CTGGATGTGTTTGTACTTGCAGAGCATGCCCTCTTC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGCTTCCTACACACTGTaGAGCACAATCTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPASYTL*STISPK
Trigger: CTTTGGGGAGATTGTGCTGCACAGTGTGTAGGAAGC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGCTATCAGAGGTCCTTaGACAGCCAAGGTATCCTTG +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLAIRGP*TAKVSL
Trigger: CAAGGATACCTTGGCTGTGCAAGGACCTCTGATAGC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAACAATTCAGGTGGCTaGTTAGTGGTGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRNNSGG*LVVPSL
Trigger: CAGAGATGGCACCACTAAGCAGCCACCTGAATTGTT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGTGATGATCTTATTCTaGCTGCTACTTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPVMILF*LLLGHC
Trigger: ACAGTGGCCAAGTAGCAGGCAGAATAAGATCATCAC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCCCTGCGCCCGCGCTaGCCGGAGCACGATATGCAT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIALRPR*PEHDMH
Trigger: ATGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR GCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACTGCCACCTCTTTGCTaGTGGGGTCAGGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLLPPLC*WGQDKL
Trigger: AAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLVRCE*GSGMHL
Trigger: GAGGTGCATACCGGACCCCCATTCGCATCTAACAAG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACGGCAGGGTTCACAGTaGCCCCGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPRQGSQ*PRHSEP
Trigger: CGGTTCGCTATGCCGGGGCCACTGTGAACCCTGCCG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGGCCAGATTTGCAGATaGCAAACCACAATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPGQICR*QTTIGY
Trigger: ATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTGMHQW*SEVGDS
Trigger: CGAATCTCCAACCTCAGACCACCACTGGTGCATTCC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTNGMHQ*WSEVGD
Trigger: ATCTCCAACCTCAGACCACCACTGGTGCATTCCATT...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGTGGGATTATCCAGCTaGAGGCAGCCGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLVGLSS*RQPWYS
Trigger: GGAGTACCACGGCTGCCTCCAGCTGGATAATCCCAC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRHCSCE*DYPAGG
Trigger: GCCTCCAGCTGGATAATCCCACTCACATGAACAATG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCATTACTTCTGTTCGTaGTGTCCCCGATGTCATTCG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPHYFCS*CPRCHS
Trigger: CGAATGACATCGGGGACACCACGAACAGAAGTAATG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCATTACTTCTGTTCGTaGTGTCCCCGATGTCATTCG +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTHYFCS*CPRCHS
Trigger: CGAATGACATCGGGGACACCACGAACAGAAGTAATG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGTGATGCCAAAGTACTaGGGATTTTCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEVMPKY*GFSMTG
Trigger: CCCTGTCATTGAAAATCCCCAGTACTTTGGCATCAC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCTGAACAAATGTGTCTaGCTTGAGCTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEELNKCV*LELTVG
Trigger: ACCAACAGTCAGCTCAAGCCAGACACATTTGTTCAG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAGCTCGGCCTCACGGTaGAAGTCCTTGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRSSASR*KSLRAL
Trigger: CAATGCACGCAAGGACTTCCACCGTGAGGCCGAGCT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAGCTCATACACCTCCTaGGGGCACGTGCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSSYTS*GHVRGR
Trigger: GCGACCCCGCACGTGCCCCCAGGAGGTGTATGAGCT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAGACCGGAGATGCCTTaGCCAAGTTCTGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTRPEMP*PSSEGG
Trigger: CCCTCCTTCAGAACTTGGCCAAGGCATCTCCGGTCT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGGCACAGCCTCCCGTTaGCATGCTGTGCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTGTASR*HAVPNF
Trigger: AAAATTTGGCACAGCATGCCAACGGGAGGCTGTGCC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTGGACTGCTCATCATTaGCCTTCAAGCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTWTAHH*PSSHWA
Trigger: AGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTGGACTGCTCATCATTaGCCTTCAAGCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIWTAHH*PSSHWA
Trigger: AGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTGCTCATCTCGCTGTaGGGTCTTGGACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAILLISL*GLGLLI
Trigger: GATGAGCAGTCCAAGACCCCACAGCGAGATGAGCAA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTTGAGGGGAGCAGAATaGGTGCCTTGTGTGATAGCT +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPLRGAE*VPCVIA
Trigger: AGCTATCACACAAGGCACCCATTCTGCTCCCCTCAA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTTGAGGGGAGCAGAATaGGTGCCTTGTGTGATAGCT +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLLRGAE*VPCVIA
Trigger: AGCTATCACACAAGGCACCCATTCTGCTCCCCTCAA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTGCAGAACTCCATCTTaGTTGGCCGATGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPCRTPS*LADDEG
Trigger: TCCCTCATCATCGGCCAACCAAGATGGAGTTCTGCA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAAATCCGAAACCAAAATaGGGGCGTAGCTTGATTGGA +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPNPKPK*GRSLIG
Trigger: TCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAAACAAAGGGCAGAATaGATTCATCTCCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRKQRAE*IHLLLG
Trigger: CCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGGAAAACAATTCAGGTaGCTGCTTAGTGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRGKQFR*LLSGAI
Trigger: GATGGCACCACTAAGCAGCCACCTGAATTGTTTTCC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGGGTCCTTGGCCACATaGGGAGCTTACAGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWGSLAT*GAYREN
Trigger: ATTCTCTCTGTAAGCTCCCCATGTGGCCAAGGACCC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGCTGATAACGGAGGCTaGGCCTTTCATGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPADNGG*AFHAKL
Trigger: AAGTTTGGCATGAAAGGCCCAGCCTCCGTTATCAGC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGAGGGTCACAGCATGGTaGGAATCACAGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVRVTAW*ESQERS
Trigger: GCTCCTCTCCTGTGATTCCCACCATGCTGTGACCCT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCGCTCTCTCTCGCACCTaGCGTGAAACTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPALSRT*RETGFL
Trigger: CAGAAAACCAGTTTCACGCCAGGTGCGAGAGAGAGC...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTAPVVV*GWRFEK
Trigger: TTTCTCGAATCTCCAACCTCAGACCACCACTGGTGC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIGCLSQ*MECTSG
Trigger: ACCACTGGTGCATTCCATTCACTGTGAAAGGCAACC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTGCLSQ*MECTSG
Trigger: ACCACTGGTGCATTCCATTCACTGTGAAAGGCAACC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWGCLSQ*MECTSG
Trigger: ACCACTGGTGCATTCCATTCACTGTGAAAGGCAACC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPGCLSQ*MECTSG
Trigger: ACCACTGGTGCATTCCATTCACTGTGAAAGGCAACC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCACCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTA +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPPWYSV*LVTCIL
Trigger: TAAAATACATGTTACCAATCACACGGAGTACCACGG...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEPWYSV*LVTCIL
Trigger: TAAAATACATGTTACCAATCACACGGAGTACCACGG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLFQASP*SEQKSV
Trigger: AACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIFQASP*SEQKSV
Trigger: AACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTATCACCTCATTGTTTaGCAGCTGGTACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIYHLIV*QLVPGL
Trigger: CAGCCCTGGTACCAGCTGTCAAACAATGAGGTGATA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTGCAGGACTCGGCCCTaGGTGATACACTCTATCACC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRCRTRP*VIHSIT
Trigger: GGTGATAGAGTGTATCACTCAGGGCCGAGTCCTGCA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCCAGAGCAAGGGACTTaGCCTGTGTACACTGAACAT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLPEQGT*PVYTEH
Trigger: ATGTTCAGTGTACACAGGTCAAGTCCCTTGCTCTGG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCCAGACATGCAGCGTaGCAAACCTGTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTARHAA*QTCVGF
Trigger: AAAACCAACACAGGTTTGTCACGCTGCATGTCTGGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCCTCTGAATGTCTCTaGGTCTCAACGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTASECL*VSTSSS
Trigger: AGATGAGGACGTTGAGACTCAGAGACATTCAGAGGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTCAGCATTCTCTCACTaGCAGGAAGCAAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPSAFSH*QEANPN
Trigger: GTTTGGGTTTGCTTCCTGTCAGTGAGAGAATGCTGA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTATACCAACTGGGATTaGCCAACTCATTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRYTNWD*PTHSSL
Trigger: CAGACTGGAATGAGTTGGTCAATCCCAGTTGGTATA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCACAAAGGCCCTCAATaGCATGAATCCTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRHKGPQ*HESSKR
Trigger: TCTCTTTGAGGATTCATGTCATTGAGGGCCTTTGTG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCCAGCAGGGTTTCCTTaGGGAACATCTATCCATACC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWPAGFP*GTSIHT
Trigger: GGTATGGATAGATGTTCCTCAAGGAAACCCTGCTGG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGCGGGTGCAGTTAAATaGTGGCTGCGGGGCATTTGC +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKAGAVK*WLRGIC
Trigger: GCAAATGCCCCGCAGCCATCATTTAACTGCACCCGC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGGCTGTCTCCCTTTTTaGAATGGAAACCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWGCLPF*NGNRAW
Trigger: CCAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR TCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTCTCTTTCAGGGTCATaGTTTCTGCTATTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPSLSGS*FLLLAG
Trigger: GCCAGCTAATAGCAGAAATCATGACCCTGAAAGAGA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGAACCTTTGCCATACTaGGCTCCTGCCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLEPLPY*APAWLT
Trigger: TGTGAGCCAGGCAGGAGCTCAGTATGGCAAAGGTTC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAACCAGGGAATGGGTTaGGGGGAGACATTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKNQGMG*GETLVQ
Trigger: CTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTCTAGCTCAGCAGCCTaGGAGGGTCTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFSSSAA*EGLWRP
Trigger: GGGCCTCCAGAGACCCTCTCAGGCTGCTGAGCTAGA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGCTCTCGCACCTGGCGTaGAACTGGTTTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVLSHLA*NWFSVF
Trigger: GAAGACAGAAAACCAGTTTCACGCCAGGTGCGAGAG...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGCTGGCGAAGTGACGTaGGGGCTGACGCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNAGEVT*GLTQSR
Trigger: CCTGCTCTGCGTCAGCCCTCACGTCACTTCGCCAGC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTGCTTGTTGCGGGCGTaGCGAGTCCAGCTTATCAGA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRCLLRA*RVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACTCCTCGGTGCTTGTTaGGGGCGTGCCGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWILLGAC*GRAESS
Trigger: GCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCTCCTCGGTGCTTGTTaGGGGCGTGCCGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLLGAC*GRAESS
Trigger: GCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAATCCCTAGCAGCCAGTaGCAGCCCGAGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPIPSSQ*QPECLS
Trigger: GGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGAT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLQSRK*HDARRR
Trigger: CCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEGEYSC*FHSGST
Trigger: TGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRPGEYS*CFHSGS
Trigger: ACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTPGEYS*CFHSGS
Trigger: ACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCGCCACACAAGAGATCTaGTTCCCACTGTCATCGGAT +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPATQEI*FPLSSD
Trigger: ATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGC...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCTTCAGGGTCTTCACTaGCACCAAGATCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLLQGLH*HQDLVL
Trigger: CAGGACAAGATCTTGGTGGCAGTGAAGACCCTGAAG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCTTCAGGGTCTTCACTaGCACCAAGATCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLQGLH*HQDLVL
Trigger: CAGGACAAGATCTTGGTGGCAGTGAAGACCCTGAAG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGTGGAAGTCCTTGCGTaGATTGTCACTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPVEVLA*IVTGIL
Trigger: AAGGATGCCAGTGACAATGCACGCAAGGACTTCCAC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCACGGTGGAAGTCCTTaGGTGCATTGTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTHGGSP*VHCHWH
Trigger: ATGCCAGTGACAATGCACGCAAGGACTTCCACCGTG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGCAGCATCTGCGACTaGGTCAGTTCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHCSICD*VSSVGG
Trigger: CCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGCAGCATCTGCGACTaGGTCAGTTCCGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGCSICD*VSSVGG
Trigger: CCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCCCTGTAGTAGTCAGTaGTGTACACGTCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRPCSSQ*CTRPGT
Trigger: TGTCCCGGGACGTGTACAGCACTGACTACTACAGGG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGTCCTCAGGGGAAGGTaGCGAATACATTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTVLRGR*RIHSSQ
Trigger: CTGGGAAGAATGTATTCGGCACCTTCCCCTGAGGAC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGATCTTTGCTCTCTACTaGACGCTATCATTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEIFALY*TLSFLV
Trigger: CACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGAT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCACGGAAGCCATCTTTaGTCTCTACTGCACGCTATC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTHGSHL*SLLHAI
Trigger: GATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTGTCCGAGCACACTATaGGCCATCTTGTGTCTCACG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTCPSTL*AILCLT
Trigger: CGTGAGACACAAGATGGCGCATAGTGTGCTCGGACA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGAATCGACGAAGACCATaGACAATTTTGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEENRRRP*TILLAQ
Trigger: CTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGAAGCACACTTCCAGTaGTTGGTCTGGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASREAHFQ*LVWAQP
Trigger: AGGCTGTGCCCAGACCAAGCACTGGAAGTGTGCTTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCTGCCCCTTCCTTACTaGGTCACAGAGTTCTACAGT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLPLPY*VTEFYS
Trigger: ACTGTAGAACTCTGTGACGCAGTAAGGAAGGGGCAG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTTAGCTGGCCAGACATaGAGCGTGACAAACCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLAGQT*SVTNLC
Trigger: ACACAGGTTTGTCACGCTGCATGTCTGGCCAGCTAA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGATTCAGTCCCAATGGTaGTGGAAGCTAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTIQSQW*WKLGWR
Trigger: TCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAAT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTGTGGGGTCTTGGACTaGTCATCATTGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAICGVLD*SSLAFK
Trigger: CTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGGAATTCCTAAGAGTTaGTCATCTCGCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPGIPKS*SSRCGV
Trigger: GACCCCACAGCGAGATGAGCAACTCTTAGGAATTCC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAAGCTTATTTTTAAAGTaGAGGCCATGGCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPSLFLK*RPWPSK
Trigger: CTTGGAAGGCCATGGCCTGCACTTTAAAAATAAGCT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGCTATCAGAGGTCCTTaGACAGCCAAGGTATCCTTG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWAIRGP*TAKVSL
Trigger: CAAGGATACCTTGGCTGTGCAAGGACCTCTGATAGC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGAGGCTGGGCCTTTCATaGCAAACTTGGAGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWRLGLS*QTWSVL
Trigger: CAAGACACTCCAAGTTTGGCATGAAAGGCCCAGCCT...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAGGCTGGGCCTTTCATaGCAAACTTGGAGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIRLGLS*QTWSVL
Trigger: CAAGACACTCCAAGTTTGGCATGAAAGGCCCAGCCT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGAGGTGCTGCTTAGCTaGCTGAGAGTTACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVEVLLS*LRVTSA
Trigger: TGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGACCTGCCACCTCTTTaGTGCTGGGGTCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSDLPPL*CWGQDK
Trigger: CTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGGTC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTCAAGTCAGCTAAGCTaGGCAACTCCAAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVSSQLS*ATPRAL
Trigger: CAGAGCCCTTGGAGTTGCGCAGCTTAGCTGACTTGA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAACGCCGCCTCTGCTACTaGTGGCGAAGTGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKRRLCY*WRSDVR
Trigger: CCTCACGTCACTTCGCCAGCAGTAGCAGAGGCGGCG...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLVRCE*GSGMHL
Trigger: GAGGTGCATACCGGACCCCCATTCGCATCTAACAAG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGCTCCCGGGACTCTCTaGGGCGCAGATTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSAPGTL*GADSLL
Trigger: TAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCCCAGAGCCGCGCCATaGCGGGTCCATGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNPRAAP*RVHATL
Trigger: TAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCACAGGAGCATGTAAATaGATTGCCCACCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPTGACK*IAHQDQ
Trigger: CTGATCCTGGTGGGCAATCCATTTACATGCTCCTGT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGACAGGAGCATGTAAATaGATTGCCCACCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLTGACK*IAHQDQ
Trigger: CTGATCCTGGTGGGCAATCCATTTACATGCTCCTGT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCACTGGATTTAGCCTCTTaGAGAGTCTTGATCCACATA +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPLDLAS*RVLIHI
Trigger: TATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAG...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCCAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPQILSV*TGFSLL
Trigger: CAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTG...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGGMHQW*SEVGDS
Trigger: CGAATCTCCAACCTCAGACCACCACTGGTGCATTCC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLGMHQW*SEVGDS
Trigger: CGAATCTCCAACCTCAGACCACCACTGGTGCATTCC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGCCTTTCACAGTGAATaGAATGCACCAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLAFHSE*NAPVVV
Trigger: GACCACCACTGGTGCATTCCATTCACTGTGAAAGGC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLEPLKR*FGVAFH
Trigger: GTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGCATTACTTCTGTTCGTaGTGTCCCCGATGTCATTCG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLHYFCS*CPRCHS
Trigger: CGAATGACATCGGGGACACCACGAACAGAAGTAATG...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCATTACTTCTGTTCGTaGTGTCCCCGATGTCATTCG +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLHYFCS*CPRCHS
Trigger: CGAATGACATCGGGGACACCACGAACAGAAGTAATG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGGAGATGTGATGGAGTaGGCTGGCAGAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGGDVME*AGRVII
Trigger: GATGATGACTCTGCCAGCCCACTCCATCACATCTCC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGACCTTCCGAAGAAGATaGAGTGTTACTCCCATTGGA +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRTFRRR*SVTPIG
Trigger: TCCAATGGGAGTAACACTCCATCTTCTTCGGAAGGT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTGCGTGCATTGTCACTaGCATCCTTCAGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPCVHCH*HPSGSS
Trigger: TGAAGACCCTGAAGGATGCCAGTGACAATGCACGCA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATACTGCGTCAGTTCCGTaGGCGGGTTGCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHTASVP*AGCPQP
Trigger: TGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAGCTCATACACCTCCTaGGGGCACGTGCGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWISSYTS*GHVRGR
Trigger: GCGACCCCGCACGTGCCCCCAGGAGGTGTATGAGCT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGATGTTCTTCCTCATGTaGGGCTCTCGCTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRMFFLM*GSRCQH
Trigger: GTGCTGGCAGCGAGAGCCCCACATGAGGAAGAACAT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCCTGTGGGTTCGACGTaGATGAGGATTTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTPVGST*MRISRL
Trigger: AAGCCTGGAAATCCTCATCCACGTCGAACCCACAGG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTGGCCTTCAAGCCACTaGGCTGCCAACATTCCAATT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIWPSSH*AANIPI
Trigger: AATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTGGCCTTCAAGCCACTaGGCTGCCAACATTCCAATT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTWPSSH*AANIPI
Trigger: AATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTTGCTCATCTCGCTGTaGGGTCTTGGACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLLISL*GLGLLI
Trigger: GATGAGCAGTCCAAGACCCCACAGCGAGATGAGCAA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTTCCTCAGGCCTAGCTaGCCTATGAATCTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPFLRPS*PMNLCL
Trigger: TAAGCACAGATTCATAGGCCAGCTAGGCCTGAGGAA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGGATCCTCCATCTGCTaGGATGCTTCTAGAACATCA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLGSSIC*DASRTS
Trigger: TGATGTTCTAGAAGCATCCCAGCAGATGGAGGATCC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCTGATAACGGAGGCTaGGCCTTTCATGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTADNGG*AFHAKL
Trigger: AAGTTTGGCATGAAAGGCCCAGCCTCCGTTATCAGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGACAGTTGGCTGCGGCTaGGGACAGTGGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLTVGCG*GQWPLW
Trigger: CCAGAGGGGCCACTGTCCCCAGCCGCAGCCAACTGT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTTGCTAGGATGTCTCTaGCCACACGGGAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLLLGCL*PHGSRT
Trigger: GGTCCTACTCCCGTGTGGCCAGAGACATCCTAGCAA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCGTTGCTGGGTGGGGCTaGGATTGTTTAGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPVAGWG*DCLVLV
Trigger: GACAAGAACTAAACAATCCCAGCCCCACCCAGCAAC...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGCTCTCTCTCGCACCTaGCGTGAAACTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVALSRT*RETGFL
Trigger: CAGAAAACCAGTTTCACGCCAGGTGCGAGAGAGAGC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCAGACCCTATGCTAGATaGAATTGCTTGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPRPYAR*NCLSSV
Trigger: GACTGAGGACAAGCAATTCCATCTAGCATAGGGTCT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCTGGCCCTGCCCATGTaGCTGGATGCACCAACCCTG +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLALPM*LDAPTL
Trigger: CAGGGTTGGTGCATCCAGCCACATGGGCAGGGCCAG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCAACTCCAAGGGCTCTaGGGACATAGACTAGATGTG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPQLQGL*GHRLDV
Trigger: CACATCTAGTCTATGTCCCCAGAGCCCTTGGAGTTG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGTCATGGAACTTTCCTaGGCTGGGAGTTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVVMELS*AGSSVS
Trigger: GCTGACAGAACTCCCAGCCCAGGAAAGTTCCATGAC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTCAAAATCAGGTGGCTaGGACGTTCTTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPSKSGG*DVLLSL
Trigger: CAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp GAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATaGGTGTTCCCCAATCACAGCTCACAGTATATGCAG +
Preference number: 4 (lower is better)
Translates to: EVLLSCLRVTSA*VFPNHSSQYMQ
Trigger: CTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp ACCAACCCTGAGAGACCCTATGCTAGATGGAATTGCTaGTCCTCAGTCCAGCTGTCCCTCTGTATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TNPERPYARWNC*SSVQLSLCIWS
Trigger: ACTCCAGATACAGAGGGACAGCTGGACTGAGGACAAGCAATTCCATCTAGCATAGGGTCTCTCAGGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAGGCAGTACAAATCCTaGGTGTCTGGACTGGATTTA +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPRQYKS*VSGLDL
Trigger: TAAATCCAGTCCAGACACTCAGGATTTGTACTGCCT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWAPVVV*GWRFEK
Trigger: TTTCTCGAATCTCCAACCTCAGACCACCACTGGTGC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLGQPMK*AEICFS
Trigger: TGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVFQASP*SEQKSV
Trigger: AACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWDRFYQ*RLWKGF
Trigger: AAATCCCTTCCACAGACGTCACTGATAAAACCGGTC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCCCAAATCCAAACCATaGGAAATCTTTCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEPKSKP*EIFHAK
Trigger: TTTGGCATGAAAGATTTCTCATGGTTTGGATTTGGG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277120.8
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGTGTCTGGCTTGAGCTaGCTGTTGGTGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWVSGLS*LLVMPK
Trigger: CTTTGGCATCACCAACAGTCAGCTCAAGCCAGACAC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTGTCGCTTGATGTGCTaGACAAATGTGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLCRLMC*TNVSGL
Trigger: CAAGCCAGACACATTTGTTCAGCACATCAAGCGACA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGCTGTTTGCCATAGGTaGAAATCTCCCACAACACGA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPAVCHR*KSPTTR
Trigger: TCGTGTTGTGGGAGATTTTCACCTATGGCAAACAGC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCCAGAGCAAGGGACTTaGCCTGTGTACACTGAACAT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTPEQGT*PVYTEH
Trigger: ATGTTCAGTGTACACAGGTCAAGTCCCTTGCTCTGG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGCATGCTTTCTTTCCTaGACTGCTTGTTTGCATATT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEACFLS*TACLHI
Trigger: AATATGCAAACAAGCAGTTCAGGAAAGAAAGCATGC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGTCTTGCCATCCTGATTaGTCGAGGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWSCHPD*SRRWVY
Trigger: ATAGACCCATCTCCTCGATCAATCAGGATGGCAAGA...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGCTGCCGTAAAGGATTaGGCCTCACATCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWAAVKD*ASHPRK
Trigger: TTTTCTTGGATGTGAGGCTCAATCCTTTACGGCAGC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTATACCAACTGGGATTaGCCAACTCATTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLYTNWD*PTHSSL
Trigger: CAGACTGGAATGAGTTGGTCAATCCCAGTTGGTATA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGAGTGATGACCCTAAATaGGAGCTCTCAGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGSDDPK*ELSACL
Trigger: AAGGCAGGCTGAGAGCTCTCATTTAGGGTCATCACT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCCCTGCCTTTGGTTCTaGAATCACACATATCTAATC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRPCLWF*NHTYLI
Trigger: GATTAGATATGTGTGATTTCAGAACCAAAGGCAGGG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTCCTCAGTAGTAGACTaGAGACCAAATGACTTGCAA +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRSSVVD*RPNDLQ
Trigger: TTGCAAGTCATTTGGTCTTCAGTCTACTACTGAGGA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGAGTTCTTCCTCATACTaGGACAAGTGGAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLSSSSY*DKWRHK
Trigger: TTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGCTGCCTGACACAGACTaGACAGAGCATACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVLPDTD*TEHTKV
Trigger: GACCTTTGTATGCTCTGTTCAGTCTGTGTCAGGCAG...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACTAGTGGGTCAGAAATaGAATCAGTCCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLLVGQK*NQSLLG
Trigger: TCCCAGCAGGGACTGATTTCATTTCTGACCCACTAG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAGCCAGCGAGGCTCCTaGTCCAACCCAATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMSQRGS*SNPIPG
Trigger: TCCCGGAATTGGGTTGGAGCAGGAGCCTCGCTGGCT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCAATGGGGGTCCGGTATaGACCTCGAGGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGNGGPV*TSRPGS
Trigger: GGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATT...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395882.6
CDS-3UTR GCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATGCTTGTTGCGGGCGTaGCGAGTCCAGCTTATCAGA +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKCLLRA*RVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPGLPCA*GSLNSS
Trigger: CGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAATCCCTAGCAGCCAGTaGCAGCCCGAGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIIPSSQ*QPECLS
Trigger: GGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGAT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCCATGGCGGGTCCATaGCACCTTATCCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFAMAGP*HLIQDD
Trigger: GTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGCCATGGCGGGTCCATaGCACCTTATCCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKAMAGP*HLIQDD
Trigger: GTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGCCATGGCGGGTCCATaGCACCTTATCCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHAMAGP*HLIQDD
Trigger: GTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTCAGGAGAAGGGTCGCTaGACCAGATCCGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGQEKGR*TRSERH
Trigger: GTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTG...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLPGEYS*CFHSGS
Trigger: ACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGG...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIPQLGI*RFARGI
Trigger: TATTCCCCTGGCAAACCTGCAGATACCCAATTGTGG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIRCGQI*RWQTTI
Trigger: AATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGTGGAAGTCCTTGCGTaGATTGTCACTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTVEVLA*IVTGIL
Trigger: AAGGATGCCAGTGACAATGCACGCAAGGACTTCCAC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAATGTGGGGCTCTCGCTaGCAGCACCCCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIMWGSR*QHPSIS
Trigger: GCTGATGCTGGGGTGCTGGCAGCGAGAGCCCCACAT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGATGCACAATTTTGCTTaGACAGTTAAAAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEMHNFA*TVKRTG
Trigger: ACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCAT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGACCTTTTTATGGATCTaGTCTACCTATCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEETFLWI*STYQGN
Trigger: GTTTCCCTGATAGGTAGAGCAGATCCATAAAAAGGT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTACTCCCTCGCTTGACTaGAGTTGCTACTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTTPSLD*SCYWIS
Trigger: GGAAATCCAGTAGCAACTGCAGTCAAGCGAGGGAGT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTTAGCTGGCCAGACATaGAGCGTGACAAACCTGTGT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLAGQT*SVTNLC
Trigger: ACACAGGTTTGTCACGCTGCATGTCTGGCCAGCTAA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTATTCAGTCCCAATGGTaGTGGAAGCTAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTIQSQW*WKLGWR
Trigger: TCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAAT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCCACCCATGCAGTACTaGACAGAGTTGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPPPMQY*TELKSV
Trigger: CACACTTTTCAACTCTGTGCAGTACTGCATGGGTGG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCCACCCATGCAGTACTaGACAGAGTTGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLPPMQY*TELKSV
Trigger: CACACTTTTCAACTCTGTGCAGTACTGCATGGGTGG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGGAAAGGCAACTTCTTaGTTGGCTAGGTTATGGAAG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLGKATS*LARLWK
Trigger: CTTCCATAACCTAGCCAAGCAAGAAGTTGCCTTTCC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCACATGAAGAGGGCATaGTCTGCAAGTACAAACACA +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPHMKRA*SASTNT
Trigger: TGTGTTTGTACTTGCAGAGCATGCCCTCTTCATGTG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAGAACAGCAGCAATGTaGCATGAAGGCTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWRTAAM*HEGSHE
Trigger: CTCGTGGGAGCCTTCATGGCACATTGCTGCTGTTCT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCAATCTACTAGCACATaGAAGAGTGGCCAATCCGAA +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPQSTST*KSGQSE
Trigger: TTCGGATTGGCCACTCTTGCATGTGCTAGTAGATTG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGCAATCTACTAGCACATaGAAGAGTGGCCAATCCGAA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLQSTST*KSGQSE
Trigger: TTCGGATTGGCCACTCTTGCATGTGCTAGTAGATTG...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAAGACAGAGAAAAGCTaGATTTCCCAGGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRKTEKS*ISQGEN
Trigger: GTTTTCTCCCTGGGAAATGCAGCTTTTCTCTGTCTT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAATCTCCTCCTCGGGCTaGTCTCTCAGTCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQISSSG*SLSLRG
Trigger: CCCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGAT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAACGCAGCCCAACATGGTaGAGCAGCAGCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQRSPTW*SSSRLN
Trigger: ATTCAGCCTGCTGCTGCTGCACCATGTTGGGCTGCG...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAGGCTGGGCCTTTCATaGCAAACTTGGAGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTRLGLS*QTWSVL
Trigger: CAAGACACTCCAAGTTTGGCATGAAAGGCCCAGCCT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCAGTTAAATGATGGCTaGGGGGCATTTGCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLQLNDG*GAFASL
Trigger: AAGGCTTGCAAATGCCCCGCAGCCATCATTTAACTG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGAGGTGCTGCTTAGCTaGCTGAGAGTTACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLEVLLS*LRVTSA
Trigger: TGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTGTTTTCAAACAAAATaGTGCAGGCCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPCFQTK*CRPGSE
Trigger: TTCAGAGCCAGGCCTGCAGCATTTTGTTTGAAAACA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCTGCTTTTGAGAAACTaGCCCTCTTTAAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPLLLRN*PSLRHG
Trigger: CCCATGCCTTAAAGAGGGGCAGTTTCTCAAAAGCAG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGCCATACTGAGCTCCTaGCTGGCTCACAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKAILSS*LAHSLN
Trigger: ATTCAAGCTGTGAGCCAGGCAGGAGCTCAGTATGGC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGAGGGGAGACATTGGTaGAGAATTCCCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLEGRHW*RIPSKG
Trigger: CCCTTTGCTGGGAATTCTGCACCAATGTCTCCCCTC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCGGCAGGGTTCACAGTaGCCCCGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPRQGSQ*PRHSEP
Trigger: CGGTTCGCTATGCCGGGGCCACTGTGAACCCTGCCG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCGGCAGGGTTCACAGTaGCCCCGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGRQGSQ*PRHSEP
Trigger: CGGTTCGCTATGCCGGGGCCACTGTGAACCCTGCCG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCGGCAGGGTTCACAGTaGCCCCGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIRQGSQ*PRHSEP
Trigger: CGGTTCGCTATGCCGGGGCCACTGTGAACCCTGCCG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCCCAGAGCCGCGCCATaGCGGGTCCATGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPPRAAP*RVHATL
Trigger: TAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGCICRT*DRRKRP
Trigger: GGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCACAGGAGCATGTAAATaGATTGCCCACCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAITGACK*IAHQDQ
Trigger: CTGATCCTGGTGGGCAATCCATTTACATGCTCCTGT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTACAGGAGCATGTAAATaGATTGCCCACCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPTGACK*IAHQDQ
Trigger: CTGATCCTGGTGGGCAATCCATTTACATGCTCCTGT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCTGGATTTAGCCTCTTaGAGAGTCTTGATCCACATA +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTLDLAS*RVLIHI
Trigger: TATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRGMHQW*SEVGDS
Trigger: CGAATCTCCAACCTCAGACCACCACTGGTGCATTCC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKGMHQW*SEVGDS
Trigger: CGAATCTCCAACCTCAGACCACCACTGGTGCATTCC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPNGMHQ*WSEVGD
Trigger: ATCTCCAACCTCAGACCACCACTGGTGCATTCCATT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGCCTTTCACAGTGAATaGAATGCACCAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTAFHSE*NAPVVV
Trigger: GACCACCACTGGTGCATTCCATTCACTGTGAAAGGC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWEPLKR*FGVAFH
Trigger: GTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASREPLKR*FGVAFH
Trigger: GTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGTGGGATTATCCAGCTaGAGGCAGCCGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQVGLSS*RQPWYS
Trigger: GGAGTACCACGGCTGCCTCCAGCTGGATAATCCCAC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIHCSCE*DYPAGG
Trigger: GCCTCCAGCTGGATAATCCCACTCACATGAACAATG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCTCCCATACTCATTCTTaGCTATTAGAGTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTSHTHS*LLECSP
Trigger: GGGACTACACTCTAATAGCCAAGAATGAGTATGGGA...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCATTACTTCTGTTCGTaGTGTCCCCGATGTCATTCG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIHYFCS*CPRCHS
Trigger: CGAATGACATCGGGGACACCACGAACAGAAGTAATG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAACTGCGTCAGTTCCGTaGGCGGGTTGCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWITASVP*AGCPQP
Trigger: TGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCCCGCGGCGATCTGCTaGGCTATATGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGPAAIC*AICSIC
Trigger: GCAGATGCTGCATATAGCCCAGCAGATCGCCGCGGG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCTTTTCCAAGTTCTTaGCTTTCCCACCTGACCCCG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSFPSS*LSHLTP
Trigger: CGGGGTCAGGTGGGAAAGCCAAGAACTTGGAAAAGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAAGGACGGGTGGGCATaGAAGTTAGGGGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHKDGWA*KLGVGG
Trigger: CCCTCCGACCCCTAACTTCCATGCCCACCCGTCCTT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTTCCAGTGCTTGGTCTaGGCACAGCCTCCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGFQCLV*AQPPVG
Trigger: GCCAACGGGAGGCTGTGCCCAGACCAAGCACTGGAA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGACTGCAGTTGCTACTaGATTTCCTTTTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEDCSCY*ISFCSV
Trigger: AACAGAACAAAAGGAAATCCAGTAGCAACTGCAGTC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGTAGTCCTACCCACGTaGAGTATGGAAGCACTAACA +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLVVLPT*SMEALT
Trigger: TGTTAGTGCTTCCATACTCCACGTGGGTAGGACTAC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGTAGTCCTACCCACGTaGAGTATGGAAGCACTAACA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIVVLPT*SMEALT
Trigger: TGTTAGTGCTTCCATACTCCACGTGGGTAGGACTAC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTCCTGTTCAAACACATaGCTACTAGCAGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESCSNT*LLAAFM
Trigger: CATAAAAGCTGCTAGTAGCCATGTGTTTGAACAGGA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCAGGTTGAGAGAAGCTaGTCACATGATTTACAAACA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEQVERS*SHDLQT
Trigger: TGTTTGTAAATCATGTGACCAGCTTCTCTCAACCTG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCTGTGTTTGCTCAGCTaGTCCTGGTCCACAATCTAC +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGLCLLS*SWSTIY
Trigger: GTAGATTGTGGACCAGGACCAGCTGAGCAAACACAG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTCTCCCTTTTTGAAATaGAAACCGTGCTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPSPFLK*KPCLVQ
Trigger: CTGAACCAAGCACGGTTTCCATTTCAAAAAGGGAGA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTCAGCATGAGATACTGTaGCCTTCTCACTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLQHEIL*PSHSAD
Trigger: GTCTGCCGAGTGAGAAGGCCACAGTATCTCATGCTG...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCGGAAAACTTGAGAACTaGCGGCATGTTTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPGKLEN*RHVSAF
Trigger: AAAAGCAGAAACATGCCGCCAGTTCTCAAGTTTTCC...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGGACCAACCAGGGAATaGGTTGAGGGGAGACATTGG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSGPTRE*VEGRHW
Trigger: CCAATGTCTCCCCTCAACCCATTCCCTGGTTGGTCC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp AAGACAAAACTGTGTCCGAGCACACTATGCGCCATCTaGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGC +
Preference number: 4 (lower is better)
Translates to: KTKLCPSTLCAI*CLTEAIFALYC
Trigger: GCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp AGAGTGGCCAATCCGAAACCAAAATGGGGGCGTAGCTaGATTGGATTCATCCTGTTGGTACACACACTCCAG +
Preference number: 4 (lower is better)
Translates to: RVANPKPKWGRS*IGFILLVHTLQ
Trigger: CTGGAGTGTGTGTACCAACAGGATGAATCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATTGGCCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 72 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATaGGAGAGTGACAGGCCCGATTTCAGCAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPL*ESDRPDFSKNA
Trigger: AGCATTTTTGCTGAAATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGTCAGACAAGTCAAGGTaGCGGAAATGTTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWSDKSR*RKCFLD
Trigger: GTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGA...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPRLTES*SSPTRF
Trigger: AAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWGCLSQ*MECTSG
Trigger: ACCACTGGTGCATTCCATTCACTGTGAAAGGCAACC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTCCCCATTGTTCATGTaGGTGGGATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLSPLFM*VGLSSW
Trigger: CCAGCTGGATAATCCCACTCACATGAACAATGGGGA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRGQPMK*AEICFS
Trigger: TGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKGQPMK*AEICFS
Trigger: TGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWGQPMK*AEICFS
Trigger: TGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVDRFYQ*RLWKGF
Trigger: AAATCCCTTCCACAGACGTCACTGATAAAACCGGTC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTCTCCCATTGGAGATGTaGTGGAGTGGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGLPLEM*WSGLAE
Trigger: CTCTGCCAGCCCACTCCATCACATCTCCAATGGGAG...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCACTGGGGATTTTCAATaGCAGGGATCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAITGDFQ*QGSWSF
Trigger: GAATGACCAAGATCCCTGTCATTGAAAATCCCCAGT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCCTTGGCCAAGTTCTaGAGGAGGGTATGGATGCCC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGALAKF*RRVWMP
Trigger: GGGCATCCATACCCTCCTTCAGAACTTGGCCAAGGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGAACTGGAGTGTCTGCTaGTATAACAAATTACGTTTG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEENWSVC*YNKLRL
Trigger: CAAACGTAATTTGTTATATCAGCAGACACTCCAGTT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTCTGTGGATAGCGCTTaGGAAACAAACCAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSVDSA*ETNQCY
Trigger: ATAGCACTGGTTTGTTTCTCAAGCGCTATCCACAGA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGGGAAGCAAGAGAATTaGGGGTATGTGTGTATATGC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTGKQEN*GYVCIC
Trigger: GCATATACACACATACCCTCAATTCTCTTGCTTCCC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTCTTGCCATCCTGATTaGTCGAGGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGSCHPD*SRRWVY
Trigger: ATAGACCCATCTCCTCGATCAATCAGGATGGCAAGA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTCTAAACGAGCTAGTTaGGTTAAAGACCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPSKRAS*VKDQLQ
Trigger: CTGGAGTTGGTCTTTAACTCAACTAGCTCGTTTAGA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGTCATTCGATTGCACTaGAGTCTGCAGATAATCTCT +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPVIRLH*SLQIIS
Trigger: AGAGATTATCTGCAGACTTCAGTGCAATCGAATGAC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTCAGCATTCTCTCACTaGCAGGAAGCAAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGSAFSH*QEANPN
Trigger: GTTTGGGTTTGCTTCCTGTCAGTGAGAGAATGCTGA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAACAATCTCCCCAAAGTaGGCCATTACTATAGAAATA +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPTISPK*AITIEI
Trigger: TATTTCTATAGTAATGGCTCACTTTGGGGAGATTGT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTTGGAGGCAAAAAGTaGTCATCTGCTTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWLGGKK*SSASVE
Trigger: CTCAACTGAAGCAGATGATCACTTTTTGCCTCCAAG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAACTAGGTCTAGAGGCCTaGGACATCAGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQLGLEA*DIRRGR
Trigger: CCTTCCTCTCCTGATGTCTCAGGCCTCTAGACCTAG...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCACAAAGGCCCTCAATaGCATGAATCCTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWHKGPQ*HESSKR
Trigger: TCTCTTTGAGGATTCATGTCATTGAGGGCCTTTGTG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCAGACATGAGCGCTGTTaGAAAGAAATTAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTRHERC*KEISVR
Trigger: TCTGACACTAATTTCTTTTCAACAGCGCTCATGTCT...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCTCTGGAGGCCCCCATTaGGCCATGAGTAAATATAAT +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPSGGPH*AMSKYN
Trigger: ATTATATTTACTCATGGCTCAATGGGGGCCTCCAGA...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGGGTTACTTGGAGAGTaGGAAGCCAAAAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLGLLGE*EAKSKL
Trigger: GAGTTTGCTTTTGGCTTCTCACTCTCCAAGTAACCC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACTGGGTGCTCACTCATaGACATGCCAAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLLGAHS*TCQSYT
Trigger: AGTATAGCTTTGGCATGTTCATGAGTGAGCACCCAG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAATGGGGGTCCGGTATaGACCTCGAGGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYNGGPV*TSRPGS
Trigger: GGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277120.8
ENST00000323115.10
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTRFLVR*EWGSGM
Trigger: CATACCGGACCCCCATTCGCATCTAACAAGGAATCT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVRFLVR*EWGSGM
Trigger: CATACCGGACCCCCATTCGCATCTAACAAGGAATCT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATGCTTGTTGCGGGCGTaGCGAGTCCAGCTTATCAGA +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQCLLRA*RVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTCTCTTAACTCCTCGGTaGTTGTTGCGGGCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGLLTPR*LLRACR
Trigger: TCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAG...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCTCTTAACTCCTCGGTaGTTGTTGCGGGCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFLLTPR*LLRACR
Trigger: TCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGA +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKERHCI*RTWDRR
Trigger: TCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCGGGTAAAATTGATGTaGTGCAGGTTGCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLRVKLM*CRLLFF
Trigger: GAAAAACAGCAACCTGCAGCACATCAATTTTACCCG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPPGEYS*CFHSGS
Trigger: ACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGCCACACAAGAGATCTaGTTCCCACTGTCATCGGAT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKATQEI*FPLSSD
Trigger: ATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGCCACACAAGAGATCTaGTTCCCACTGTCATCGGAT +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRATQEI*FPLSSD
Trigger: ATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCATAGTTGGTGCAAAATaGACAGTGAGGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPIVGAK*TVRLTE
Trigger: TTCTGTCAACCTCACTGTGCATTTTGCACCAACTAT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCCCGATGTCATTCGCTaGAGTTCCATAATCTTCATA +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLPDVIR*SSIIFI
Trigger: TATGAAGATTATGGAACTGCAGCGAATGACATCGGG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGTGGAAGTCCTTGCGTaGATTGTCACTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRVEVLA*IVTGIL
Trigger: AAGGATGCCAGTGACAATGCACGCAAGGACTTCCAC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGTTCCGTGGGCGGGTTaGCCTCAGCCATCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYVPWAG*PQPSAR
Trigger: CCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAAC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATACGCCAGGTAGACCATaGCCGCGGCGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYTPGRP*PRRSAG
Trigger: CCCAGCAGATCGCCGCGGGCATGGTCTACCTGGCGT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAGCCTCCCGTTGGCATaGTGTGCCAAATTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISLPLA*CAKFCI
Trigger: AATACAAAATTTGGCACAGCATGCCAACGGGAGGCT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGATTCAGTCCCAATGGTaGTGGAAGCTAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRIQSQW*WKLGWR
Trigger: TCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAAT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTGTGGGGTCTTGGACTaGTCATCATTGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRCGVLD*SSLAFK
Trigger: CTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGATATGTGCAGGATaGAGAACTCCATCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWLICAG*RTPSWL
Trigger: CAACCAAGATGGAGTTCTGCATCCTGCACATATCAG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGTTAGGATCCTCCATCTaGTGGGATGCTTCTAGAACA +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWLGSSI*WDASRT
Trigger: TGTTCTAGAAGCATCCCAGCAGATGGAGGATCCTAA...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGAAAAACTCCGGTGGTaGCATCTCTACTTAACCAGA +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWEKLRW*HLYLTR
Trigger: TCTGGTTAAGTAGAGATGGCACCACCGGAGTTTTTC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGAAGACAGAGAAAAGCTaGATTTCCCAGGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLKTEKS*ISQGEN
Trigger: GTTTTCTCCCTGGGAAATGCAGCTTTTCTCTGTCTT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTCAGGACAAGCATACTaGCTGACACAGACTGAACAG +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVSGQAY*LTQTEQ
Trigger: CTGTTCAGTCTGTGTCAGGCAGTATGCTTGTCCTGA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGCTATGGCGTCTGTGTaGATGTCTAACTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKAMASV*MSNCQS
Trigger: GCTCTGACAGTTAGACATGCACACAGACGCCATAGC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAACTCTGTCTGAGGAGATaGTCCAAGCCTCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKLCLRR*SKPQPF
Trigger: GAATGGCTGAGGCTTGGAGCATCTCCTCAGACAGAG...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGAACCTGGCATGGTTTaGAGGTACTACAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKEPGMV*RYYRHV
Trigger: CACATGCCTGTAGTACCTGCAAACCATGCCAGGTTC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCGCCGCCTCTGCTACTaGTGGCGAAGTGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIRRLCY*WRSDVR
Trigger: CCTCACGTCACTTCGCCAGCAGTAGCAGAGGCGGCG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAATGGGGGTCCGGTATaGACCTCGAGGCTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWINGGPV*TSRLAR
Trigger: ACGCGCAAGCCTCGAGGTGCATACCGGACCCCCATT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGCTCCCGGGACTCTCTaGGGCGCAGATTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHAPGTL*GADSLL
Trigger: TAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCTCCCGGGACTCTCTaGGGCGCAGATTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFAPGTL*GADSLL
Trigger: TAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGCTCCCGGGACTCTCTaGGGCGCAGATTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPAPGTL*GADSLL
Trigger: TAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGGCCAGATTTGCAGATaGCAAACCACAATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLGQICR*QTTIGY
Trigger: ATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGAAGGAGCCCTGTGTGTaGCTTGTTTCATTCATATGT +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLKEPCV*LVSFIC
Trigger: ACATATGAATGAAACAAGCCACACACAGGGCTCCTT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGCCTTTCACAGTGAATaGAATGCACCAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRAFHSE*NAPVVV
Trigger: GACCACCACTGGTGCATTCCATTCACTGTGAAAGGC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSEPLKR*FGVAFH
Trigger: GTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTHCSCE*DYPAGG
Trigger: GCCTCCAGCTGGATAATCCCACTCACATGAACAATG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGCATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVHCSCE*DYPAGG
Trigger: GCCTCCAGCTGGATAATCCCACTCACATGAACAATG...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLHCSCE*DYPAGG
Trigger: GCCTCCAGCTGGATAATCCCACTCACATGAACAATG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTACATCAGGATAATTTaGGTTTGCACCATCGTCAAT +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEYIRII*VCTIVN
Trigger: ATTGACGATGGTGCAAACCCAAATTATCCTGATGTA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCATACATCAGGATAATTTaGGTTTGCACCATCGTCAAT +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPYIRII*VCTIVN
Trigger: ATTGACGATGGTGCAAACCCAAATTATCCTGATGTA...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGACCTTCCGAAGAAGATaGAGTGTTACTCCCATTGGA +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLTFRRR*SVTPIG
Trigger: TCCAATGGGAGTAACACTCCATCTTCTTCGGAAGGT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAATAATGACAGCATCTaGGCCACCTTCCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTNNDSI*ATFRRR
Trigger: TCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAATAATGACAGCATCTaGGCCACCTTCCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPNNDSI*ATFRRR
Trigger: TCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGTGATGCCAAAGTACTaGGGATTTTCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWVMPKY*GFSMTG
Trigger: CCCTGTCATTGAAAATCCCCAGTACTTTGGCATCAC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGTGATGCCAAAGTACTaGGGATTTTCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPVMPKY*GFSMTG
Trigger: CCCTGTCATTGAAAATCCCCAGTACTTTGGCATCAC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAGCTCGGCCTCACGGTaGAAGTCCTTGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSSASR*KSLRAL
Trigger: CAATGCACGCAAGGACTTCCACCGTGAGGCCGAGCT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTCAATACTGTGTCTATaGATGAAGAAGTACACACTG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESILCL*MKKYTL
Trigger: CAGTGTGTACTTCTTCATCCATAGACACAGTATTGA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGAGTCATACCTTTTTATaGATCTGCTCTACCTATCAG +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESHTFL*ICSTYQ
Trigger: CTGATAGGTAGAGCAGATCCATAAAAAGGTATGACT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGCAATGTTCCTTTCCTaGACCATTACAAAAAGTATC +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEAMFLS*TITKSI
Trigger: GATACTTTTTGTAATGGTCCAGGAAAGGAACATTGC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTCAGCCAAGATGCAGTaGGTCTTAGTAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSAKMQ*VLVKQW
Trigger: CCATTGCTTTACTAAGACCCACTGCATCTTGGCTGA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTCAGCCAAGATGCAGTaGGTCTTAGTAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLSAKMQ*VLVKQW
Trigger: CCATTGCTTTACTAAGACCCACTGCATCTTGGCTGA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGTTTGTAAATTTTACTaGGAAACCACCCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLVCKFY*ETTPCC
Trigger: ACAGCACGGGGTGGTTTCCCAGTAAAATTTACAAAC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGTTTGTAAATTTTACTaGGAAACCACCCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLVCKFY*ETTPCC
Trigger: ACAGCACGGGGTGGTTTCCCAGTAAAATTTACAAAC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGGACGAAGTGGGCTGTaGCTGTTGAGGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMGRSGL*LLRGAE
Trigger: TTCTGCTCCCCTCAACAGCCACAGCCCACTTCGTCC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGATCTAATGAGCTTCTaGGGTCCTGGATGTAATTCA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLDLMSF*GPGCNS
Trigger: TGAATTACATCCAGGACCCCAGAAGCTCATTAGATC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTGCAGAACTCCATCTTaGTTGGCCGATGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWCRTPS*LADDEG
Trigger: TCCCTCATCATCGGCCAACCAAGATGGAGTTCTGCA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCACTTGAAGGCATTTTaGGTGAGGAAGACAATCCTA +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLHLKAF*VRKTIL
Trigger: TAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAGGCATTCCCTAAAGTaGAGACTAGCTGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRRHSLK*RLAVLI
Trigger: TATCAAAACAGCTAGTCTCCACTTTAGGGAATGCCT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAATGGAAACCGTGCTTaGTTCAGCTCTTGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKNGNRA*FSSCAC
Trigger: ACACGCGCAAGAGCTGAACCAAGCACGGTTTCCATT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCGGACCTCCCCACATTaGGGGCCAGCTGCCCTTACA +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGRTSPH*GPAALT
Trigger: TGTAAGGGCAGCTGGCCCCCAATGTGGGGAGGTCCG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGTTGCTGGGTGGGGCTaGGATTGTTTAGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLVAGWG*DCLVLV
Trigger: GACAAGAACTAAACAATCCCAGCCCCACCCAGCAAC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACAGTCTGGCAGCACCTaGCAGCAAATTCAATTCATG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLQSGST*QQIQFM
Trigger: CATGAATTGAATTTGCTGCCAGGTGCTGCCAGACTG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTCAGCCAAATTCAGTCTaGCAGCACCTGGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLQPNSV*QHLAAN
Trigger: ATTTGCTGCCAGGTGCTGCCAGACTGAATTTGGCTG...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCACCATCAAAATCAGGTaGCTGGGACGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPTIKIR*LGRSFV
Trigger: GACAAAAGAACGTCCCAGCCACCTGATTTTGATGGT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCGCCTCTGCTACTGCTaGCGAAGTGACGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNRLCYC*RSDVRA
Trigger: AGCCCTCACGTCACTTCGCCAGCAGTAGCAGAGGCG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376208.6
3UTR CAA 72 bp ATCCTGTTGGTACACACACTCCAGTCAGGCTGGGCCTaGGGAAATACCCAGAACAAATACATTAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: ILLVHTLQSGWA*GNTQNKYIRIL
Trigger: GAGGATCCTAATGTATTTGTTCTGGGTATTTCCCAAGGCCCAGCCTGACTGGAGTGTGTGTACCAACAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 72 bp CCAGCTATCAGAGGTCCTTGCACAGCCAAGGTATCCTaGATGGAAGTGAAGGCATCCCTAAACATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PAIRGPCTAKVS*MEVKASLNIRK
Trigger: TTTCCTGATGTTTAGGGATGCCTTCACTTCCATCAAGGATACCTTGGCTGTGCAAGGACCTCTGATAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATCAGACAAGTCAAGGTaGCGGAAATGTTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLSDKSR*RKCFLD
Trigger: GTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCAGACAAGTCAAGGTaGCGGAAATGTTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSDKSR*RKCFLD
Trigger: GTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAAGGCAGTACAAATCCTaGGTGTCTGGACTGGATTTA +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLRQYKS*VSGLDL
Trigger: TAAATCCAGTCCAGACACTCAGGATTTGTACTGCCT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQAPVVV*GWRFEK
Trigger: TTTCTCGAATCTCCAACCTCAGACCACCACTGGTGC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKGCLSQ*MECTSG
Trigger: ACCACTGGTGCATTCCATTCACTGTGAAAGGCAACC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSGCLSQ*MECTSG
Trigger: ACCACTGGTGCATTCCATTCACTGTGAAAGGCAACC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRDRFYQ*RLWKGF
Trigger: AAATCCCTTCCACAGACGTCACTGATAAAACCGGTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGCCAACACCTTGTCTTaGTTTTACTTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPANTLS*FYFPKS
Trigger: GGATTTGGGAAAGTAAAATCAAGACAAGGTGTTGGC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277120.8
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGCCAACACCTTGTCTTaGTTTTACTTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWANTLS*FYFPKS
Trigger: GGATTTGGGAAAGTAAAATCAAGACAAGGTGTTGGC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304053.10
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGACTGGGGATTTTCAATaGCAGGGATCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGTGDFQ*QGSWSF
Trigger: GAATGACCAAGATCCCTGTCATTGAAAATCCCCAGT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGCTGTTTGCCATAGGTaGAAATCTCCCACAACACGA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRAVCHR*KSPTTR
Trigger: TCGTGTTGTGGGAGATTTTCACCTATGGCAAACAGC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAATGAGCTCTGGACATaGATCCACCTCTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPNELWT*IHLFST
Trigger: AGTTGAAAAGAGGTGGATTCATGTCCAGAGCTCATT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGGGTTCGACGTGGATaGGGATTTCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGWVRRG*GFPGFR
Trigger: CCTGAAGCCTGGAAATCCTCATCCACGTCGAACCCA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAAGAAAGTCCATACTTaGCCAGGTAATCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIKKVHT*PGNPAV
Trigger: AACAGCAGGATTACCTGGTCAAGTATGGACTTTCTT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAAGAAAGTCCATACTTaGCCAGGTAATCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTKKVHT*PGNPAV
Trigger: AACAGCAGGATTACCTGGTCAAGTATGGACTTTCTT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGATTCATTCCAGCCCTaGCAACAAGAAAATACCCCT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTDSFQP*QQENTP
Trigger: AGGGGTATTTTCTTGTTGTCAGGGCTGGAATGAATC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCAAGAACCTTTGACTTaGGCAGCAGTGATTCATTCC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTQEPLT*AAVIHS
Trigger: GGAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGATTCAGGTGTCACTTTaGAATCAGCCAAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLIQVSL*NQPRCS
Trigger: ACTGCATCTTGGCTGATTTCAAAGTGACACCTGAAT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCAGCTGCCCTTGAGCTaGGTTTGTAAATTTTACTGG +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGQLPLS*VCKFYW
Trigger: CCAGTAAAATTTACAAACTCAGCTCAAGGGCAGCTG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGGCCTAGCTGGCCTATaGATCTGTGCTTATTTACAT +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGGLAGL*ICAYLH
Trigger: ATGTAAATAAGCACAGATTCATAGGCCAGCTAGGCC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAAGGCTCCCACGAGATaGGTCGTCAACCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNKAPTR*VVNPVC
Trigger: GCACACTGGGTTGACGACTCATCTCGTGGGAGCCTT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAAGCAGCAATGTGCCATaGAGGCTCCCACGAGATGAG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSSSNVP*RLPRDE
Trigger: CTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCTTCTAGAACATCACTaGTGCTTTGGTGAAATTGGA +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLLLEHH*CFGEIG
Trigger: TCCAATTTCACCAAAGCATCAGTGATGTTCTAGAAG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGATCATCTGCTTCAGTTaGGCAATAAACTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLIICFS*AINCIW
Trigger: CCAAATGCAGTTTATTGCTCAACTGAAGCAGATGAT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCCCTGCCTTTGGTTCTaGAATCACACATATCTAATC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWPCLWF*NHTYLI
Trigger: GATTAGATATGTGTGATTTCAGAACCAAAGGCAGGG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGGCATGGGGACCATATaGACTAATCCCCCAACCCAG +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMGMGTI*TNPPTQ
Trigger: CTGGGTTGGGGGATTAGTTCATATGGTCCCCATGCC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGGCATGGGGACCATATaGACTAATCCCCCAACCCAG +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKGMGTI*TNPPTQ
Trigger: CTGGGTTGGGGGATTAGTTCATATGGTCCCCATGCC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATTGAGACCAGTGCAATaGGGTGGCAGGAAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPLRPVQ*GGRKCP
Trigger: AGGGCACTTCCTGCCACCTCATTGCACTGGTCTCAA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGTCCGCTCCCTTGCATaGAATGTGGGAGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQVRSLA*NVGEGN
Trigger: ATTTCCCTCTCCCACATTTCATGCAAGGGAGCGGAC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGGCTGTCTCCCTTTTTaGAATGGAAACCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSGCLPF*NGNRAW
Trigger: CCAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTCTCTTTCAGGGTCATaGTTTCTGCTATTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVSLSGS*FLLLAG
Trigger: GCCAGCTAATAGCAGAAATCATGACCCTGAAAGAGA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGCCTGGCTCACAGCTTaGATTTCATCTCTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKAWLTA*ISSLFQ
Trigger: CTGAAAGAGAGATGAAATTCAAGCTGTGAGCCAGGC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGCCCCCATTGAGCCATaGGTAAATATAATAAGATAT +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTAPIEP*VNIIRY
Trigger: ATATCTTATTATATTTACTCATGGCTCAATGGGGGC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATCTGGAGGCCCCCATTaGGCCATGAGTAAATATAAT +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLSGGPH*AMSKYN
Trigger: ATTATATTTACTCATGGCTCAATGGGGGCCTCCAGA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCTTTCCTGTTGTGAGATaGACCTTTCTTAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPFPVVR*TFLSLR
Trigger: TCTGAGGCTAAGAAAGGTTCATCTCACAACAGGAAA...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCCCTATGTCTTTAGATaGACCTGGCATGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKPYVFR*TWHGLQ
Trigger: CTGCAAACCATGCCAGGTTCATCTAAAGACATAGGG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAGCCAGCGAGGCTCCTaGTCCAACCCAATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPSQRGS*SNPIPG
Trigger: TCCCGGAATTGGGTTGGAGCAGGAGCCTCGCTGGCT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277120.8
ENST00000323115.10
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWRFLVR*EWGSGM
Trigger: CATACCGGACCCCCATTCGCATCTAACAAGGAATCT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGCTTGTTGCGGGCGTaGCGAGTCCAGCTTATCAGA +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGCLLRA*RVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATGCTTGTTGCGGGCGTaGCGAGTCCAGCTTATCAGA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPCLLRA*RVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACTCTTAACTCCTCGGTaGTTGTTGCGGGCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWILLTPR*LLRACR
Trigger: TCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPGLPCA*GSLNSS
Trigger: CGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGCCATGGCGGGTCCATaGCACCTTATCCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGAMAGP*HLIQDD
Trigger: GTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCAGGAGAAGGGTCGCTaGACCAGATCCGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPQEKGR*TRSERH
Trigger: GTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGTAAAATTGATGTGCTaGAGGTTGCTGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTVKLMC*RLLFFR
Trigger: TCTGAAAAACAGCAACCTGCAGCACATCAATTTTAC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCGGGTAAAATTGATGTaGTGCAGGTTGCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPRVKLM*CRLLFF
Trigger: GAAAAACAGCAACCTGCAGCACATCAATTTTACCCG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLGEYSC*FHSGST
Trigger: TGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWGEYSC*FHSGST
Trigger: TGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIGEYSC*FHSGST
Trigger: TGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATT +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWRCGQI*RWQTTI
Trigger: AATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAACACAGTGAGGTTAGGTaGGGCCAGATTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQHSEVR*GQICRW
Trigger: CCATCTGCAAATCTGGCCGCACCTAACCTCACTGTG...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGATAGTTGGTGCAAAATaGACAGTGAGGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLIVGAK*TVRLTE
Trigger: TTCTGTCAACCTCACTGTGCATTTTGCACCAACTAT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCATAGTTGGTGCAAAATaGACAGTGAGGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLIVGAK*TVRLTE
Trigger: TTCTGTCAACCTCACTGTGCATTTTGCACCAACTAT...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCGGACTCATTCAATATTaGCCCGTTATAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPGLIQY*PVIEPL
Trigger: CAGTGGTTCTATAACGGGGCAATATTGAATGAGTCC...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCCCGATGTCATTCGCTaGAGTTCCATAATCTTCATA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTPDVIR*SSIIFI
Trigger: TATGAAGATTATGGAACTGCAGCGAATGACATCGGG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCCCGATGTCATTCGCTaGAGTTCCATAATCTTCATA +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPPDVIR*SSIIFI
Trigger: TATGAAGATTATGGAACTGCAGCGAATGACATCGGG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGGCATCAGGGCCGTGTaGCCTGAGGAACTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIGIRAV*PEELVE
Trigger: CTCAACAAGTTCCTCAGGGCACACGGCCCTGATGCC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGTGGCCAAATCGCGGTaGACGAAGTGCTGGGACGCC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYVAKSR*TKCWDA
Trigger: GGCGTCCCAGCACTTCGTGCACCGCGATTTGGCCAC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCCCTGTAGTAGTCAGTaGTGTACACGTCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGPCSSQ*CTRPGT
Trigger: TGTCCCGGGACGTGTACAGCACTGACTACTACAGGG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATATGTGGGGCTCTCGCTaGCAGCACCCCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYMWGSR*QHPSIS
Trigger: GCTGATGCTGGGGTGCTGGCAGCGAGAGCCCCACAT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGATCTTTGCTCTCTACTaGACGCTATCATTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLIFALY*TLSFLV
Trigger: CACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGAT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTGGAGCAGTAGTGTCTaGACACAAGGTATTAATCGA +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIWSSSV*TQGINR
Trigger: TCGATTAATACCTTGTGTGCAGACACTACTGCTCCA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTCGCTTGACTGCAGTTaGTACTGGATTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSLDCS*YWISFC
Trigger: ACAAAAGGAAATCCAGTAGCAACTGCAGTCAAGCGA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGTTTTTGTACAAATCTaGCCCTTCCTTACTGCGTCA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPVFVQI*PFLTAS
Trigger: TGACGCAGTAAGGAAGGGGCAGATTTGTACAAAAAC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAGATGGCAAAATAGTTaGTTGGTGGTGGTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTRWQNS*LVVVVV
Trigger: CACAACAACCACCACCAAGCAACTATTTTGCCATCT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTGGGAAACCACCCCGTaGTGTCAGGTGATGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMWETTP*CQVMWC
Trigger: ACACCACATCACCTGACAGCACGGGGTGGTTTCCCA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATGGGAAACCACCCCGTaGTGTCAGGTGATGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSWETTP*CQVMWC
Trigger: ACACCACATCACCTGACAGCACGGGGTGGTTTCCCA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGAGCTTATTTTTAAAGTaGAGGCCATGGCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWSLFLK*RPWPSK
Trigger: CTTGGAAGGCCATGGCCTGCACTTTAAAAATAAGCT...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAACAATTCAGGTGGCTaGTTAGTGGTGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWNNSGG*LVVPSL
Trigger: CAGAGATGGCACCACTAAGCAGCCACCTGAATTGTT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTCAGTTAAATGATGGCTaGGGGGCATTTGCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLQLNDG*GAFASL
Trigger: AAGGCTTGCAAATGCCCCGCAGCCATCATTTAACTG...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATATGTGTGCTAGGGTGTaGGCGAACGCGTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYMCARV*ANACPA
Trigger: CGCAGGGCACGCGTTCGCGCACACCCTAGCACACAT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTCCTGAGAGTTACCTCTaGATTGGTGTTCCCCAATCA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLPESYL*IGVPQS
Trigger: TGATTGGGGAACACCAATGCAGAGGTAACTCTCAGG...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTTATTCATTAGCGACCTaGCACCTCTTTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSYSLAT*HLFAAG
Trigger: CCCAGCAGCAAAGAGGTGGCAGGTCGCTAATGAATA...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTCAGGACAAGCATACTaGCTGACACAGACTGAACAG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLSGQAY*LTQTEQ
Trigger: CTGTTCAGTCTGTGTCAGGCAGTATGCTTGTCCTGA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTTTCAAACAAAATGCTaGAGGCCTGGCTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVFQTKC*RPGSEV
Trigger: GACTTCAGAGCCAGGCCTGCAGCATTTTGTTTGAAA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCTCCCGGGACTCTCTaGGGCGCAGATTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIAPGTL*GADSLL
Trigger: TAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCTGGATTTAGCCTCTTaGAGAGTCTTGATCCACATA +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLLDLAS*RVLIHI
Trigger: TATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTACAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLQILSV*TGFSLL
Trigger: CAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTG...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAAGGAGCCCTGTGTGTaGCTTGTTTCATTCATATGT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIKEPCV*LVSFIC
Trigger: ACATATGAATGAAACAAGCCACACACAGGGCTCCTT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCAAGGAGCCCTGTGTGTaGCTTGTTTCATTCATATGT +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPKEPCV*LVSFIC
Trigger: ACATATGAATGAAACAAGCCACACACAGGGCTCCTT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGAGAAATGTGATAGTTaGTGCAAAATGCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPEKCDS*CKMHSE
Trigger: CTCACTGTGCATTTTGCACCAACTATCACATTTCTC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRNGMHQ*WSEVGD
Trigger: ATCTCCAACCTCAGACCACCACTGGTGCATTCCATT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWNGMHQ*WSEVGD
Trigger: ATCTCCAACCTCAGACCACCACTGGTGCATTCCATT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKNGMHQ*WSEVGD
Trigger: ATCTCCAACCTCAGACCACCACTGGTGCATTCCATT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTCCCATACTCATTCTTaGCTATTAGAGTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSHTHS*LLECSP
Trigger: GGGACTACACTCTAATAGCCAAGAATGAGTATGGGA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCTGAACAAATGTGTCTaGCTTGAGCTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLNKCV*LELTVG
Trigger: ACCAACAGTCAGCTCAAGCCAGACACATTTGTTCAG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAGCTCGGCCTCACGGTaGAAGTCCTTGCGTGCATTG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWISSASR*KSLRAL
Trigger: CAATGCACGCAAGGACTTCCACCGTGAGGCCGAGCT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGACCGGAGATGCCTTaGCCAAGTTCTGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGRPEMP*PSSEGG
Trigger: CCCTCCTTCAGAACTTGGCCAAGGCATCTCCGGTCT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAGACCGGAGATGCCTTaGCCAAGTTCTGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHRPEMP*PSSEGG
Trigger: CCCTCCTTCAGAACTTGGCCAAGGCATCTCCGGTCT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGGAGAGCAGCTTGGTaGCCTCCAGCGGCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGRRAAW*PPAAVK
Trigger: TTTAACTGCCGCTGGAGGCCACCAAGCTGCTCTCCT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGACAATGGAGTACACTTaGAATGAAACCACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTTMEYT*NETTLP
Trigger: TGGGAGAGTGGTTTCATTCCAAGTGTACTCCATTGT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTACAATGGAGTACACTTaGAATGAAACCACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPTMEYT*NETTLP
Trigger: TGGGAGAGTGGTTTCATTCCAAGTGTACTCCATTGT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAAGACAAAACTGGAATaGGATGCTCCCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPKTKLE*DAPKVS
Trigger: TGAGACTTTGGGAGCATCCCATTCCAGTTTTGTCTT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTTGTCAGACCAGGTTTaGGCTAGAGAATTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLSDQV*ARELGL
Trigger: CAAACCTAATTCTCTAGCCCAAACCTGGTCTGACAA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCTCGCTGTGGGGTCTTaGACTGCTCATCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGLAVGS*TAHHWP
Trigger: AGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTATAACAGTGATATATaGCCAAACCAAAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEYNSDI*PNQRST
Trigger: TGTTGACCTTTGGTTTGGCCATATATCACTGTTATA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCGTCAAGATGTTGTCTaGCCAGAATTTGCAGATAAC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWRQDVV*PEFADN
Trigger: GTTATCTGCAAATTCTGGCCAGACAACATCTTGACG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAATTAACTATAATAGCTaGAGAAGTATGGCACACTCT +
Preference number: 4 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPINYNS*RSMAHS
Trigger: AGAGTGTGCCATACTTCTCCAGCTATTATAGTTAAT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAAAGACAAGGACGAAGTaGGCTGTGGCTGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPKTRTK*AVAVEG
Trigger: CCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAAGACAAGGACGAAGTaGGCTGTGGCTGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKKTRTK*AVAVEG
Trigger: CCCCTCAACAGCCACAGCCCACTTCGTCCTTGTCTT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGGATCCTCCATCTGCTaGGATGCTTCTAGAACATCA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWGSSIC*DASRTS
Trigger: TGATGTTCTAGAAGCATCCCAGCAGATGGAGGATCC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGAATCCGAAACCAAAATaGGGGCGTAGCTTGATTGGA +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGNPKPK*GRSLIG
Trigger: TCCAATCAAGCTACGCCCCCATTTTGGTTTCGGATT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATATGAGAGTCTGACGTaGCCAGCTATGGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPYESLT*PAMARP
Trigger: GGGTCTGGCCATAGCTGGCCACGTCAGACTCTCATA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTATGAGAGTCTGACGTaGCCAGCTATGGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGYESLT*PAMARP
Trigger: GGGTCTGGCCATAGCTGGCCACGTCAGACTCTCATA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAATTCTGCCTGCTACTTaGCCACTGTCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPILPAT*PLSPSP
Trigger: TGGGGAGGGAGACAGTGGCCAAGTAGCAGGCAGAAT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAATTCCAAGCTCCATTaGTCACTCATACATACACGT +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPNSKLH*SLIHTR
Trigger: ACGTGTATGTATGAGTGACCAATGGAGCTTGGAATT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCAGTCTTGTCTTTATTaGTATATGCGTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPQSCLY*YMRLAL
Trigger: CAGAGCCAAACGCATATACCAATAAAGACAAGACTG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGGAGTCCAGCTTACATaGCAGCATCAACCAACAAGC +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKGVQLT*QHQPTS
Trigger: GCTTGTTGGTTGATGCTGCCATGTAAGCTGGACTCC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGTGCCAGAACCTTTATTaGAGAGTGACAGGCCCGATT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKCQNLY*RVTGPI
Trigger: AATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCA...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGATAAGATATAGGACGTaGACCACATTAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVIRYRT*TTLRAP
Trigger: GGGTGCCCTTAATGTGGTCCACGTCCTATATCTTAT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTTCTGTGTTGCTGGGTaGGGCTGGGATTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLFCVAG*GWDCLV
Trigger: AACTAAACAATCCCAGCCCCACCCAGCAACACAGAA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTCAGCCAAATTCAGTCTaGCAGCACCTGGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSQPNSV*QHLAAN
Trigger: ATTTGCTGCCAGGTGCTGCCAGACTGAATTTGGCTG...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCTGGATTACAGCAAATaGTTGAACATGAAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPLDYSK*LNMKCV
Trigger: CACGCACTTCATGTTCAACCATTTGCTGTAATCCAG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAGGCAGTACAAATCCTaGGTGTCTGGACTGGATTTA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRRQYKS*VSGLDL
Trigger: TAAATCCAGTCCAGACACTCAGGATTTGTACTGCCT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPRLTES*SSPTRF
Trigger: AAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFAPVVV*GWRFEK
Trigger: TTTCTCGAATCTCCAACCTCAGACCACCACTGGTGC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGTGTCTGGCTTGAGCTaGCTGTTGGTGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHVSGLS*LLVMPK
Trigger: CTTTGGCATCACCAACAGTCAGCTCAAGCCAGACAC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGTGTCTGGCTTGAGCTaGCTGTTGGTGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMVSGLS*LLVMPK
Trigger: CTTTGGCATCACCAACAGTCAGCTCAAGCCAGACAC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATGCAGGACTCGGCCCTaGGTGATACACTCTATCACC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWICRTRP*VIHSIT
Trigger: GGTGATAGAGTGTATCACTCAGGGCCGAGTCCTGCA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGGGTATGGATGCCCTTaGTGTTCTTCCTCATGTGGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHGYGCP*CSSSCG
Trigger: CCCACATGAGGAAGAACATCAAGGGCATCCATACCC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTACTGTGTCTATGGATaGAGAAGTACACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTYCVYG*RSTHCF
Trigger: GAAGCAGTGTGTACTTCTTCATCCATAGACACAGTA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTATGCAGAAGCCAGATTaGTTCAAAAGAAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPMQKPD*FKRKGK
Trigger: CTTACCCTTTCTTTTGAATCAATCTGGCTTCTGCAT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAATGAGCTCTGGACATaGATCCACCTCTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTNELWT*IHLFST
Trigger: AGTTGAAAAGAGGTGGATTCATGTCCAGAGCTCATT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCACCTGACCCCGAAATaGGCTCTGGACATGAATCCA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHHLTPK*ALDMNP
Trigger: TGGATTCATGTCCAGAGCTCATTTCGGGGTCAGGTG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCTTGGCTTTCCCACCTaGCCCCGAAATGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPLGFPT*PRNELW
Trigger: CCAGAGCTCATTTCGGGGTCAGGTGGGAAAGCCAAG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGACAACGCAGAGACATTaGTACTCAGCTAATAAACTC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTTTQRH*YSANKL
Trigger: GAGTTTATTAGCTGAGTATCAATGTCTCTGCGTTGT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGAACATGAGTGCATGTaGTGCCCTCAGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGEHECM*CPQGEV
Trigger: AACCTCACCCTGAGGGCATCACATGCACTCATGTTC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGAACATGAGTGCATGTaGTGCCCTCAGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHEHECM*CPQGEV
Trigger: AACCTCACCCTGAGGGCATCACATGCACTCATGTTC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGACAAAAACAGCATACTaGCAATGGAGTACACTTGGA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTTKTAY*QWSTLG
Trigger: TCCAAGTGTACTCCATTGTCAGTATGCTGTTTTTGT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTACAAAAACAGCATACTaGCAATGGAGTACACTTGGA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPTKTAY*QWSTLG
Trigger: TCCAAGTGTACTCCATTGTCAGTATGCTGTTTTTGT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGAAGGCCGTATTTGGTaGTCATTACATTTTAGAACG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIEGRIW*SLHFRT
Trigger: CGTTCTAAAATGTAATGATCACCAAATACGGCCTTC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCATGCTTTCTTTCCTaGACTGCTTGTTTGCATATT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTACFLS*TACLHI
Trigger: AATATGCAAACAAGCAGTTCAGGAAAGAAAGCATGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAAGAAAGTCCATACTTaGCCAGGTAATCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTKKVHT*PGNPAV
Trigger: AACAGCAGGATTACCTGGTCAAGTATGGACTTTCTT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCAAGAACCTTTGACTTaGGCAGCAGTGATTCATTCC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRQEPLT*AAVIHS
Trigger: GGAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTGGTGGTGGTTGTTGTaGAATTCACAGTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRWWWLL*NSQCFA
Trigger: GGCAAAACACTGTGAATTTCACAACAACCACCACCA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTATACCAGGTCACGATTaGAGGGGAAATATATCTGTA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPIPGHD*RGNISV
Trigger: TACAGATATATTTCCCCTTCAATCGTGACCTGGTAT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCAACACAGCTGCCCTTaGGCTGAGTTTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGQHSCP*AEFVNF
Trigger: AAAATTTACAAACTCAGCTCAAGGGCAGCTGTGTTG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCTAGCCCTAGGCACATaGAGAGGGCATGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLALGT*RGHALQ
Trigger: TTGCAGAGCATGCCCTCTTCATGTGCCTAGGGCTAG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAGCAGCAATGTGCCATaGAGGCTCCCACGAGATGAG +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNSSNVP*RLPRDE
Trigger: CTCATCTCGTGGGAGCCTTCATGGCACATTGCTGCT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGCATCTCCTTTGGAGTTaGAAAGGGAATATGATATCA +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLHLLWS*KGNMIS
Trigger: TGATATCATATTCCCTTTTCAACTCCAAAGGAGATG...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTCTTCCAGTTAGGGGCTaGGTCCAAGGAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGLPVRG*VQGERF
Trigger: GAATCTCTCTCCTTGGACTCAGCCCCTAACTGGAAG...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTACCATATGAGAGTCTaGCGTGGCCAGCTATGGCCA +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGYHMRV*RGQLWP
Trigger: TGGCCATAGCTGGCCACGTCAGACTCTCATATGGTA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCTTGGAGGCAAAAAGTaGTCATCTGCTTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWLGGKK*SSASVE
Trigger: CTCAACTGAAGCAGATGATCACTTTTTGCCTCCAAG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGCGGGTGCAGTTAAATaGTGGCTGCGGGGCATTTGC +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIAGAVK*WLRGIC
Trigger: GCAAATGCCCCGCAGCCATCATTTAACTGCACCCGC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTAAGCTTTCCTACCCATaGAAACCCAGCAGTATGACA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLKLSYP*KPSSMT
Trigger: TGTCATACTGCTGGGTTTTCATGGGTAGGAAAGCTT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGACAGAAGGATACCGTaGGAGAACAATGATCATGTT +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVDRRIP*ENNDHV
Trigger: AACATGATCATTGTTCTCTCACGGTATCCTTCTGTC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGAACCAGGGAATGGGTTaGGGGGAGACATTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLNQGMG*GETLVQ
Trigger: CTGCACCAATGTCTCCCCTCAACCCATTCCCTGGTT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATTTCCTGTTGTGAGATaGACCTTTCTTAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLFPVVR*TFLSLR
Trigger: TCTGAGGCTAAGAAAGGTTCATCTCACAACAGGAAA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTACTCCACACACCCCTaGAGAGGTGTCGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIYSTHP*RGVASA
Trigger: AGCAGAGGCGACACCTCTTCAGGGGTGTGTGGAGTA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAACTGCAACACTAGCCTaGATTCAACTTAGAGTTACC +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLTATLA*IQLRVT
Trigger: GGTAACTCTAAGTTGAATTCAGGCTAGTGTTGCAGT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTCTGGGTGCTCACTCATaGACATGCCAAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSLGAHS*TCQSYT
Trigger: AGTATAGCTTTGGCATGTTCATGAGTGAGCACCCAG...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTCTTAACTCCTCGGTaGTTGTTGCGGGCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILLTPR*LLRACR
Trigger: TCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGCCATGGCGGGTCCATaGCACCTTATCCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYAMAGP*HLIQDD
Trigger: GTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGA +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIERHCI*RTWDRR
Trigger: TCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAACTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKLQSRK*HDARRR
Trigger: CCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAG...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMLQSRK*HDARRR
Trigger: CCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGTAAAATTGATGTGCTaGAGGTTGCTGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLVKLMC*RLLFFR
Trigger: TCTGAAAAACAGCAACCTGCAGCACATCAATTTTAC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCGGGTAAAATTGATGTaGTGCAGGTTGCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTRVKLM*CRLLFF
Trigger: GAAAAACAGCAACCTGCAGCACATCAATTTTACCCG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCGGGTAAAATTGATGTaGTGCAGGTTGCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGRVKLM*CRLLFF
Trigger: GAAAAACAGCAACCTGCAGCACATCAATTTTACCCG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVGEYSC*FHSGST
Trigger: TGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTCCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSPQLGI*RFARGI
Trigger: TATTCCCCTGGCAAACCTGCAGATACCCAATTGTGG...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSRCGQI*RWQTTI
Trigger: AATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCACAGTGAGGTTAGGTaGGGCCAGATTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGHSEVR*GQICRW
Trigger: CCATCTGCAAATCTGGCCGCACCTAACCTCACTGTG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACACAGTGAGGTTAGGTaGGGCCAGATTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSHSEVR*GQICRW
Trigger: CCATCTGCAAATCTGGCCGCACCTAACCTCACTGTG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTATAGTTGGTGCAAAATaGACAGTGAGGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPIVGAK*TVRLTE
Trigger: TTCTGTCAACCTCACTGTGCATTTTGCACCAACTAT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGATAGTTGGTGCAAAATaGACAGTGAGGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLIVGAK*TVRLTE
Trigger: TTCTGTCAACCTCACTGTGCATTTTGCACCAACTAT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCCCGATGTCATTCGCTaGAGTTCCATAATCTTCATA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTPDVIR*SSIIFI
Trigger: TATGAAGATTATGGAACTGCAGCGAATGACATCGGG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGATGAGAAATCTTTCATaGCAAACTTGGAGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLMRNLS*QTWSVL
Trigger: CAAGACACTCCAAGTTTGGCATGAAAGATTTCTCAT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304053.10
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTTGACGATGTGCTCATaGTGGAGGTTGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLTMCS*WRLVRS
Trigger: GCTCCTGACCAACCTCCAGCATGAGCACATCGTCAA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGATCTGCTGGGCTATATaGAGCATCTGCGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGICWAI*SICDCV
Trigger: GACGCAGTCGCAGATGCTGCATATAGCCCAGCAGAT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCAGGTAGACCGGAGATaGCTTGGCCAAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHQVDRR*LGQVLK
Trigger: CTTCAGAACTTGGCCAAGGCATCTCCGGTCTACCTG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGATGCACAATTTTGCTTaGACAGTTAAAAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTMHNFA*TVKRTG
Trigger: ACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCAT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCACCTTTTTATGGATCTaGTCTACCTATCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAITFLWI*STYQGN
Trigger: GTTTCCCTGATAGGTAGAGCAGATCCATAAAAAGGT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGTTTTTGTACAAATCTaGCCCTTCCTTACTGCGTCA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTVFVQI*PFLTAS
Trigger: TGACGCAGTAAGGAAGGGGCAGATTTGTACAAAAAC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTTCAAGCCACTGGGCTaGCAACATTCCAATTTATAT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPFKPLG*QHSNLY
Trigger: ATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTCAAGCCACTGGGCTaGCAACATTCCAATTTATAT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIFKPLG*QHSNLY
Trigger: ATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTATACTGTTAGTTGGTaGATTCACTCTAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIYTVSW*IHSRMW
Trigger: CCACATCCTAGAGTGAATGCACCAACTAACAGTATA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTATACTGTTAGTTGGTaGATTCACTCTAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLYTVSW*IHSRMW
Trigger: CCACATCCTAGAGTGAATGCACCAACTAACAGTATA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGAAAATACCCCTTCCTaGACTGTCGTTTCTAACTAT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTENTPS*TVVSNY
Trigger: ATAGTTAGAAACGACAGTGCAGGAAGGGGTATTTTC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAGATACAGAAGCAAATaGAGAATGTCCACATCTCCA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPRYRSK*RMSTSP
Trigger: TGGAGATGTGGACATTCTGCATTTGCTTCTGTATCT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGTCGTCAACCCAGTGTaGCATAAAAGAAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWVVNPV*HKRSNF
Trigger: AAAATTGCTTCTTTTATGGCACACTGGGTTGACGAC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTTAGGATCCTCCATCTaGTGGGATGCTTCTAGAACA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWLGSSI*WDASRT
Trigger: TGTTCTAGAAGCATCCCAGCAGATGGAGGATCCTAA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTCTCTGCAACTGTGTTTaGTCAGCTGGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGLCNCV*SAGPGP
Trigger: TGGACCAGGACCAGCTGAGCAAACACAGTTGCAGAG...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGAAAAACTCCGGTGGTaGCATCTCTACTTAACCAGA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWEKLRW*HLYLTR
Trigger: TCTGGTTAAGTAGAGATGGCACCACCGGAGTTTTTC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTTAGGTCCGCTCCCTTaGATGAAATGTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMLGPLP*MKCGRG
Trigger: CCCTCTCCCACATTTCATGCAAGGGAGCGGACCTAA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGAACATAGGAAGAGAATaGAAGTCATGTGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWNIGRE*KSCVRS
Trigger: GGACCTAACACATGACTTGCATTCTCTTCCTATGTT...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGGCCCGGAGCACGATATaGATCCAGCTACGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLARSTI*IQLRRS
Trigger: GCTTCTTCGTAGCTGGATGCATATCGTGCTCCGGGC...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATTGAAATGGAAACCGTaGTTGGTTCAGCTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKLKWKP*LVQLLR
Trigger: GCGCAAGAGCTGAACCAAGCACGGTTTCCATTTCAA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCTGCCACCTCTTTGCTaGTGGGGTCAGGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLLPPLC*WGQDKL
Trigger: AAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGACCTGCCACCTCTTTaGTGCTGGGGTCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGDLPPL*CWGQDK
Trigger: CTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGGTC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCCATACTGAGCTCCTaGCTGGCTCACAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFAILSS*LAHSLN
Trigger: ATTCAAGCTGTGAGCCAGGCAGGAGCTCAGTATGGC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTGCCTGGCATTGAAGTaGCAGAACCTTTATTGGAGA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLCLALK*QNLYWR
Trigger: TCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTGGGAAATTTCCTTCTaGGACAGTCATTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVWEISF*DSHCHG
Trigger: TCCATGACAATGACTGTCGCAGAAGGAAATTTCCCA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCATGCCAAAGCTATACTaGAACACTAGCCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPMPKLY*NTSLNS
Trigger: TGAATTCAGGCTAGTGTTGCAGTATAGCTTTGGCAT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGYQRLS*SGAKSV
Trigger: AACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSYQRLS*SGAKSV
Trigger: AACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHYQRLS*SGAKSV
Trigger: AACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFYQRLS*SGAKSV
Trigger: AACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTACAGGAGCATGTAAATaGATTGCCCACCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSTGACK*IAHQDQ
Trigger: CTGATCCTGGTGGGCAATCCATTTACATGCTCCTGT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAAGGAGCCCTGTGTGTaGCTTGTTTCATTCATATGT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTKEPCV*LVSFIC
Trigger: ACATATGAATGAAACAAGCCACACACAGGGCTCCTT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGAGAAATGTGATAGTTaGTGCAAAATGCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPEKCDS*CKMHSE
Trigger: CTCACTGTGCATTTTGCACCAACTATCACATTTCTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSGMHQW*SEVGDS
Trigger: CGAATCTCCAACCTCAGACCACCACTGGTGCATTCC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGCCTTTCACAGTGAATaGAATGCACCAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQAFHSE*NAPVVV
Trigger: GACCACCACTGGTGCATTCCATTCACTGTGAAAGGC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGTGGGATTATCCAGCTaGAGGCAGCCGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPVGLSS*RQPWYS
Trigger: GGAGTACCACGGCTGCCTCCAGCTGGATAATCCCAC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTCCCATACTCATTCTTaGCTATTAGAGTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVSHTHS*LLECSP
Trigger: GGGACTACACTCTAATAGCCAAGAATGAGTATGGGA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGACCTTCCGAAGAAGATaGAGTGTTACTCCCATTGGA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRTFRRR*SVTPIG
Trigger: TCCAATGGGAGTAACACTCCATCTTCTTCGGAAGGT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTTGACAAAGGTTCTGTaGATAGCGCTTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLTKVL*IALEKQ
Trigger: TTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCAGGGAAACGACGTCTaGAGCAGTAGTGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHQGNDV*SSSVCT
Trigger: TGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCACACTTCCAGTGCTTaGTCTGGGCACAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYHTSSA*SGHSLP
Trigger: CGGGAGGCTGTGCCCAGACCAAGCACTGGAAGTGTG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGACTGCAGTTGCTACTaGATTTCCTTTTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLDCSCY*ISFCSV
Trigger: AACAGAACAAAAGGAAATCCAGTAGCAACTGCAGTC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGTGACAAACCTGTGTTaGTTTTTGCTGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIVTNLC*FLLMES
Trigger: AGATTCCATCAGCAAAAACCAACACAGGTTTGTCAC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGTGACAAACCTGTGTTaGTTTTTGCTGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTVTNLC*FLLMES
Trigger: AGATTCCATCAGCAAAAACCAACACAGGTTTGTCAC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACAGTCCCAATGGTGCTaGAAGCTAGGCTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIQSQWC*KLGWRP
Trigger: AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACTCGCTGTGGGGTCTTaGACTGCTCATCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWILAVGS*TAHHWP
Trigger: AGGCCAATGATGAGCAGTCCAAGACCCCACAGCGAG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGATTCACTCTAGGATGTaGGAATTCCTAAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTIHSRM*EFLRVA
Trigger: AGCAACTCTTAGGAATTCCCACATCCTAGAGTGAAT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTATTCACTCTAGGATGTaGGAATTCCTAAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPIHSRM*EFLRVA
Trigger: AGCAACTCTTAGGAATTCCCACATCCTAGAGTGAAT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTACTAACTTAGACATTTaGAGAGTTGGGTCACTAGCC +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTTNLDI*RVGSLA
Trigger: GGCTAGTGACCCAACTCTCCAAATGTCTAAGTTAGT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTCCTGTTCAAACACATaGCTACTAGCAGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLSCSNT*LLAAFM
Trigger: CATAAAAGCTGCTAGTAGCCATGTGTTTGAACAGGA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCAGGTTGAGAGAAGCTaGTCACATGATTTACAAACA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPQVERS*SHDLQT
Trigger: TGTTTGTAAATCATGTGACCAGCTTCTCTCAACCTG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCCAAGATTGATGATTTaGGGATTTTGCTGGTTAGTA +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPPRLMI*GFCWLV
Trigger: TACTAACCAGCAAAATCCCCAAATCATCAATCTTGG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCAAGAAAAACTCCGGTaGTGCCATCTCTACTTAACC +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWQEKLR*CHLYLT
Trigger: GGTTAAGTAGAGATGGCACCACCGGAGTTTTTCTTG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTTTCCTTCCTGGCCGTaGGTTAGAGAAAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWFPSWP*VRESVS
Trigger: AGAAACACTTTCTCTAACCCACGGCCAGGAAGGAAA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAGTCTCAGAGGGCAGTaGCTCTTGCTTCCAGTTAGG +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKSLRGQ*LLLPVR
Trigger: CCTAACTGGAAGCAAGAGCCACTGCCCTCTGAGACT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTAGTCTCAGAGGGCAGTaGCTCTTGCTTCCAGTTAGG +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGSLRGQ*LLLPVR
Trigger: CCTAACTGGAAGCAAGAGCCACTGCCCTCTGAGACT...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGTTAACTCTAACTGGTaGAATTACATGGGACTTTTC +
Preference number: 4 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPVNSNW*NYMGLF
Trigger: GAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAAC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCCAAAAGTAAATAGATaGCATGGGGACCATATGAAC +
Preference number: 4 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWPKVNR*HGDHMN
Trigger: GTTCATATGGTCCCCATGCCATCTATTTACTTTTGG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGGGTCCTTGGCCACATaGGGAGCTTACAGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPGSLAT*GAYREN
Trigger: ATTCTCTCTGTAAGCTCCCCATGTGGCCAAGGACCC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTCTCCCTTTTTGAAATaGAAACCGTGCTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGSPFLK*KPCLVQ
Trigger: CTGAACCAAGCACGGTTTCCATTTCAAAAAGGGAGA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCTGAGGGTCACAGCATaGTGGGAATCACAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLLRVTA*WESQER
Trigger: CCTCTCCTGTGATTCCCACCATGCTGTGACCCTCAG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGTTGAGGGGAGACATTaGTGCAGAATTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKVEGRH*CRIPSK
Trigger: TTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAAC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTTTCTGTGTTGCTGGGTaGGGCTGGGATTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSFCVAG*GWDCLV
Trigger: AACTAAACAATCCCAGCCCCACCCAGCAACACAGAA...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTCAGTCTGGCAGCACCTaGCAGCAAATTCAATTCATG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSQSGST*QQIQFM
Trigger: CATGAATTGAATTTGCTGCCAGGTGCTGCCAGACTG...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTGGTTCAACACATTCTaGGTGCTCACTCATGAACAT +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVWFNTF*VLTHEH
Trigger: ATGTTCATGAGTGAGCACCCAGAATGTGTTGAACCA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATGGTTCAACACATTCTaGGTGCTCACTCATGAACAT +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLWFNTF*VLTHEH
Trigger: ATGTTCATGAGTGAGCACCCAGAATGTGTTGAACCA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp TTCTGTGAAAAATATCACCTCCAGCCTTTCCCCTTATaGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FCEKYHLQPFPL*VRQGRSGLWLL
Trigger: CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATATTTTTCACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 72 bp TGTCTGATATGTGCAGGATGCAGAACTCCATCTTGGTaGGCCGATGATGAGGGAGTAAACACAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CLICAGCRTPSW*ADDEGVNTVFR
Trigger: TCTGAAGACTGTGTTTACTCCCTCATCATCGGCCAACCAAGATGGAGTTCTGCATCCTGCACATATCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 72 bp AACTCCTGTGTTCTGTGTTGCTGGGTGGGGCTGGGATaGTTTAGTTCTTGTCCTTGCTACCTATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NSCVLCCWVGLG*FSSCPCYLFLE
Trigger: TTCCAGAAATAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAACACAGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp CTGACTTTAGTGGGAAATTTCCTTCTGCGACAGTCATaGTCATGGAACTTTCCTGGGCTGGGAGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LTLVGNFLLRQS*SWNFPGLGVLS
Trigger: TGACAGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTTCCCACTAAAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTAGGCAGTACAAATCCTaGGTGTCTGGACTGGATTTA +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSRQYKS*VSGLDL
Trigger: TAAATCCAGTCCAGACACTCAGGATTTGTACTGCCT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPRLTES*SSPTRF
Trigger: AAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRPWYSV*LVTCIL
Trigger: TAAAATACATGTTACCAATCACACGGAGTACCACGG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTCCCCATTGTTCATGTaGGTGGGATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSPLFM*VGLSSW
Trigger: CCAGCTGGATAATCCCACTCACATGAACAATGGGGA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCCCCATTGTTCATGTaGGTGGGATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSPLFM*VGLSSW
Trigger: CCAGCTGGATAATCCCACTCACATGAACAATGGGGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTCCCCATTGTTCATGTaGGTGGGATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGSPLFM*VGLSSW
Trigger: CCAGCTGGATAATCCCACTCACATGAACAATGGGGA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGGQPMK*AEICFS
Trigger: TGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGFQASP*SEQKSV
Trigger: AACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAATTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKFQASP*SEQKSV
Trigger: AACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAA...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGFQASP*SEQKSV
Trigger: AACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAACTGGAGTGTCTGCTaGTATAACAAATTACGTTTG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPNWSVC*YNKLRL
Trigger: CAAACGTAATTTGTTATATCAGCAGACACTCCAGTT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGAACTGGAGTGTCTGCTaGTATAACAAATTACGTTTG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLNWSVC*YNKLRL
Trigger: CAAACGTAATTTGTTATATCAGCAGACACTCCAGTT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATTCCTAAGTAGGGACTaGCACCAGCTGATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIFLSRD*HQLIPV
Trigger: CACTGGGATCAGCTGGTGTCAGTCCCTACTTAGGAA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACACCTGACCCCGAAATaGGCTCTGGACATGAATCCA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIHLTPK*ALDMNP
Trigger: TGGATTCATGTCCAGAGCTCATTTCGGGGTCAGGTG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGGGGTCGGAGGGAAGTaGGATCTGAAAAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGGVGGK*DLKSSL
Trigger: CAATGAACTTTTCAGATCTCACTTCCCTCCGACCCC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGCACTTTTGAATTTTTaGGAATTGGCTTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLALLNF*ELAFKA
Trigger: GGCTTTGAAAGCCAATTCTCAAAAATTCAAAAGTGC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGGCCAGCATATAACTTaGATGGACGTAAGGTTTATC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRGQHIT*MDVRFI
Trigger: GATAAACCTTACGTCCATTCAAGTTATATGCTGGCC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCATGGGTCCTTAATATaGTACATACATGCACATGTA +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTHGSLI*YIHAHV
Trigger: TACATGTGCATGTATGTATCATATTAAGGACCCATG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTCATGGGTCCTTAATATaGTACATACATGCACATGTA +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPHGSLI*YIHAHV
Trigger: TACATGTGCATGTATGTATCATATTAAGGACCCATG...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGCCAGACATGCAGCGTaGCAAACCTGTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHARHAA*QTCVGF
Trigger: AAAACCAACACAGGTTTGTCACGCTGCATGTCTGGC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCCTCTGAATGTCTCTaGGTCTCAACGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGASECL*VSTSSS
Trigger: AGATGAGGACGTTGAGACTCAGAGACATTCAGAGGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAACCTCTGCGGTTCTGTaGAAAATATCACCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSTSAVL*KISPPA
Trigger: GGCTGGAGGTGATATTTTTCACAGAACCGCAGAGGT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCACTGTGAGTGTGCTTaGAACTGGTTTGCTAACAAA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWHCECA*NWFANK
Trigger: TTTGTTAGCAAACCAGTTTCAAGCACACTCACAGTG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGTGATACTTACCATATaGGAGTCTGACGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKVILTI*ESDVAS
Trigger: GCTGGCCACGTCAGACTCTCATATGGTAAGTATCAC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGTGATACTTACCATATaGGAGTCTGACGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGVILTI*ESDVAS
Trigger: GCTGGCCACGTCAGACTCTCATATGGTAAGTATCAC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGAGCCTCTCATTTCCTaGGTCTTTCCAGCGCATAAC +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMEPLIS*VFPAHN
Trigger: GTTATGCGCTGGAAAGACTCAGGAAATGAGAGGCTC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGACATCAGGAAATGTATaGGATGTAACTAGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGTSGNV*DVTSLA
Trigger: GGCCAAACTAGTTACATCTCATACATTTCCTGATGT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTCCTCAGTAGTAGACTaGAGACCAAATGACTTGCAA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWSSVVD*RPNDLQ
Trigger: TTGCAAGTCATTTGGTCTTCAGTCTACTACTGAGGA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGAAGATAGAGAAAATGTaGGACCAGTTAGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGKIEKM*DQLVHL
Trigger: CAGATGGACTAACTGGTCTCACATTTTCTCTATCTT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGATATGCGTTTGGCTCTaGATGATCAACTACATCACA +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGICVWL*MINYIT
Trigger: TGTGATGTAGTTGATCATTCAGAGCCAAACGCATAT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTCCGGGAGGGTCGGGTaGCAAACCGTAACTATTCTG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGISGRVG*QTVTIL
Trigger: CAGAATAGTTACGGTTTGTCACCCGACCCTCCCGGA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTACTGTGATGCTAAAGTaGATGAAACAGGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLTVMLK*MKQVSM
Trigger: CATGGACACCTGTTTCATTCACTTTAGCATCACAGT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGATCCATAGGATTCTGTaGAAGGTCTTCATCAAGCAA +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVIHRIL*KVFIKQ
Trigger: TTGCTTGATGAAGACCTTTCACAGAATCCTATGGAT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGTTTAAGGCATGGGTATaGAGTAGCCAAGTGAAATGC +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKFKAWV*SSQVKC
Trigger: GCATTTCACTTGGCTACTTCATACCCATGCCTTAAA...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGAGAAGCTATGTTACTaGTCATCCCTTCAGGGATTA +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKEKLCY*SSLQGL
Trigger: TAATCCCTGAAGGGATGATCAGTAACATAGCTTCTC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGACAGAAGGATACCGTaGGAGAACAATGATCATGTT +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLDRRIP*ENNDHV
Trigger: AACATGATCATTGTTCTCTCACGGTATCCTTCTGTC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGAGACATGAGCGCTGTTaGAAAGAAATTAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVRHERC*KEISVR
Trigger: TCTGACACTAATTTCTTTTCAACAGCGCTCATGTCT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQRFLVR*EWGSGM
Trigger: CATACCGGACCCCCATTCGCATCTAACAAGGAATCT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTGCTTGTTGCGGGCGTaGCGAGTCCAGCTTATCAGA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPCLLRA*RVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCGGGTAAAATTGATGTaGTGCAGGTTGCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKRVKLM*CRLLFF
Trigger: GAAAAACAGCAACCTGCAGCACATCAATTTTACCCG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTCGGGTAAAATTGATGTaGTGCAGGTTGCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLRVKLM*CRLLFF
Trigger: GAAAAACAGCAACCTGCAGCACATCAATTTTACCCG...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAAATGTGATAGTTGGTaGAAAATGCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPKCDSW*KMHSEV
Trigger: AACCTCACTGTGCATTTTGCACCAACTATCACATTT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGGACTCATTCAATATTaGCCCGTTATAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRGLIQY*PVIEPL
Trigger: CAGTGGTTCTATAACGGGGCAATATTGAATGAGTCC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGGACTCATTCAATATTaGCCCGTTATAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLGLIQY*PVIEPL
Trigger: CAGTGGTTCTATAACGGGGCAATATTGAATGAGTCC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCTATATGCAGCATCTaGGACTGCGTCAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIAICSI*DCVSSV
Trigger: CACGGAACTGACGCAGTCGCAGATGCTGCATATAGC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAATCGACGAAGACCATaGACAATTTTGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRNRRRP*TILLAQ
Trigger: CTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGGAATTCCTAAGAGTTaGTCATCTCGCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGGIPKS*SSRCGV
Trigger: GACCCCACAGCGAGATGAGCAACTCTTAGGAATTCC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAGCTTTTATGATGCTTaGTCCAGTACATTGAACGTT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSFYDA*SSTLNV
Trigger: AACGTTCAATGTACTGGAGCAAGCATCATAAAAGCT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTATGTTCAAAACCTCTaGGGTTCTGTGAAAAATATC +
Preference number: 4 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLYVQNL*GSVKNI
Trigger: GATATTTTTCACAGAACCGCAGAGGTTTTGAACATA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGCTTCCTACACACTGTaGAGCACAATCTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSASYTL*STISPK
Trigger: CTTTGGGGAGATTGTGCTGCACAGTGTGTAGGAAGC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTTAGGTCCGCTCCCTTaGATGAAATGTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLGPLP*MKCGRG
Trigger: CCCTCTCCCACATTTCATGCAAGGGAGCGGACCTAA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGCCCGGAGCACGATATaGATCCAGCTACGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGARSTI*IQLRRS
Trigger: GCTTCTTCGTAGCTGGATGCATATCGTGCTCCGGGC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTATTCATTAGCGACCTaGCACCTCTTTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFYSLAT*HLFAAG
Trigger: CCCAGCAGCAAAGAGGTGGCAGGTCGCTAATGAATA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTGTTTTCAAACAAAATaGTGCAGGCCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLCFQTK*CRPGSE
Trigger: TTCAGAGCCAGGCCTGCAGCATTTTGTTTGAAAACA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCAACAAAAATCTACCTTaGAATCCTTCTAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPNKNLP*NPSSCW
Trigger: CCAACAGCTAGAAGGATTGCAAGGTAGATTTTTGTT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTC +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLVRCE*GSGMHL
Trigger: GAGGTGCATACCGGACCCCCATTCGCATCTAACAAG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCTGGATTTAGCCTCTTaGAGAGTCTTGATCCACATA +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRLDLAS*RVLIHI
Trigger: TATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCTGGATTTAGCCTCTTaGAGAGTCTTGATCCACATA +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKLDLAS*RVLIHI
Trigger: TATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGGCCAGATTTGCAGATaGCAAACCACAATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSGQICR*QTTIGY
Trigger: ATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGAGAAATGTGATAGTTaGTGCAAAATGCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLEKCDS*CKMHSE
Trigger: CTCACTGTGCATTTTGCACCAACTATCACATTTCTC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGCCTTTCACAGTGAATaGAATGCACCAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPAFHSE*NAPVVV
Trigger: GACCACCACTGGTGCATTCCATTCACTGTGAAAGGC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGTGGGATTATCCAGCTaGAGGCAGCCGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYVGLSS*RQPWYS
Trigger: GGAGTACCACGGCTGCCTCCAGCTGGATAATCCCAC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATGTGATGGAGTGGGCTaGCAGAGTCATCATCATTGC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPCDGVG*QSHHHC
Trigger: GCAATGATGATGACTCTGCCAGCCCACTCCATCACA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTGTGATGGAGTGGGCTaGCAGAGTCATCATCATTGC +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMCDGVG*QSHHHC
Trigger: GCAATGATGATGACTCTGCCAGCCCACTCCATCACA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGGAGATGTGATGGAGTaGGCTGGCAGAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIGDVME*AGRVII
Trigger: GATGATGACTCTGCCAGCCCACTCCATCACATCTCC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGAGTGTTACTCCCATTaGAGATGTGATGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGECYSH*RCDGVG
Trigger: GCCCACTCCATCACATCTCCAATGGGAGTAACACTC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGAGTGTTACTCCCATTaGAGATGTGATGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSECYSH*RCDGVG
Trigger: GCCCACTCCATCACATCTCCAATGGGAGTAACACTC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGCGTGCATTGTCACTaGCATCCTTCAGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHCVHCH*HPSGSS
Trigger: TGAAGACCCTGAAGGATGCCAGTGACAATGCACGCA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTCAATACTGTGTCTATaGATGAAGAAGTACACACTG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSILCL*MKKYTL
Trigger: CAGTGTGTACTTCTTCATCCATAGACACAGTATTGA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTTGACAAAGGTTCTGTaGATAGCGCTTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLTKVL*IALEKQ
Trigger: TTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTCTTTTCCAAGTTCTTaGCTTTCCCACCTGACCCCG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSFPSS*LSHLTP
Trigger: CGGGGTCAGGTGGGAAAGCCAAGAACTTGGAAAAGA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAGTCATACCTTTTTATaGATCTGCTCTACCTATCAG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSHTFL*ICSTYQ
Trigger: CTGATAGGTAGAGCAGATCCATAAAAAGGTATGACT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACCTGTGGGTTCGACGTaGATGAGGATTTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIPVGST*MRISRL
Trigger: AAGCCTGGAAATCCTCATCCACGTCGAACCCACAGG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGGCACAGCCTCCCGTTaGCATGCTGTGCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIGTASR*HAVPNF
Trigger: AAAATTTGGCACAGCATGCCAACGGGAGGCTGTGCC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTTGTCAGACCAGGTTTaGGCTAGAGAATTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRLSDQV*ARELGL
Trigger: CAAACCTAATTCTCTAGCCCAAACCTGGTCTGACAA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCAGTCCCAATGGTGCTaGAAGCTAGGCTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPQSQWC*KLGWRP
Trigger: AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGCAATGTTCCTTTCCTaGACCATTACAAAAAGTATC +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTAMFLS*TITKSI
Trigger: GATACTTTTTGTAATGGTCCAGGAAAGGAACATTGC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTATTCACTCTAGGATGTaGGAATTCCTAAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTIHSRM*EFLRVA
Trigger: AGCAACTCTTAGGAATTCCCACATCCTAGAGTGAAT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTCTATACTGTTAGTTaGTGCATTCACTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIFYTVS*CIHSRM
Trigger: CATCCTAGAGTGAATGCACCAACTAACAGTATAGAA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTTCTATACTGTTAGTTaGTGCATTCACTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTFYTVS*CIHSRM
Trigger: CATCCTAGAGTGAATGCACCAACTAACAGTATAGAA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTGTGTGTATACGGCCTaGATATATACAAACATCTCT +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLCVYTA*IYTNIS
Trigger: AGAGATGTTTGTATATATCCAGGCCGTATACACACA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTGTGTGTATACGGCCTaGATATATACAAACATCTCT +
Preference number: 4 (lower is better)
Translates to: TLCAILCLTEAIFALYCTCVYTA*IYTNIS
Trigger: AGAGATGTTTGTATATATCCAGGCCGTATACACACA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATGCTTGGCTAGGTTATaGAAGCTAAGGAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQCLARL*KLRSDV
Trigger: GACGTCACTCCTTAGCTTCCATAACCTAGCCAAGCA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAACTGTGTTTGCTCAGCTaGTCCTGGTCCACAATCTAC +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKLCLLS*SWSTIY
Trigger: GTAGATTGTGGACCAGGACCAGCTGAGCAAACACAG...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAAGATCCGGGGATCACTaGACAGCAAACTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSRSGDH*TANSIK
Trigger: CTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGCAGTCTTGTCTTTATTaGTATATGCGTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGQSCLY*YMRLAL
Trigger: CAGAGCCAAACGCATATACCAATAAAGACAAGACTG...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAAATGGAAACCGTGCTTaGTTCAGCTCTTGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPNGNRA*FSSCAC
Trigger: ACACGCGCAAGAGCTGAACCAAGCACGGTTTCCATT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCCTTTTTATATCAAGTaGTACCTAAATGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPPFYIK*YLNGSW
Trigger: CCAGGATCCATTTAGGTACCACTTGATATAAAAAGG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGGAAAACTTGAGAACTaGCGGCATGTTTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLGKLEN*RHVSAF
Trigger: AAAAGCAGAAACATGCCGCCAGTTCTCAAGTTTTCC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCGTAAATCAACACCTTTaGGAAAGATCGGAATCTAAG +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPVNQHL*ERSESK
Trigger: CTTAGATTCCGATCTTTCCCAAAGGTGTTGATTTAC...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTGAGGGTCACAGCATaGTGGGAATCACAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILRVTA*WESQER
Trigger: CCTCTCCTGTGATTCCCACCATGCTGTGACCCTCAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCTTGCTAGGATGTCTCTaGCCACACGGGAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGLLGCL*PHGSRT
Trigger: GGTCCTACTCCCGTGTGGCCAGAGACATCCTAGCAA...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGTCCCTGCTGGGAGACTaGGAGAGAAAACCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLSLLGD*ERKPLN
Trigger: ATTCAGGGGTTTTCTCTCCCAGTCTCCCAGCAGGGA...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCATTCTCAGTTGGTCATaGGGTCAGTTTAGAATACTA +
Preference number: 4 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPILSWS*GQFRIL
Trigger: TAGTATTCTAAACTGACCCCATGACCAACTGAGAAT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCGACAGTCATTGTCATaGAACTTTCCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFRQSLS*NFPGLG
Trigger: TCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGGTTAGGGGTGGGGGTTaGTTCAACACATTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLVRGGG*FNTFWV
Trigger: CACCCAGAATGTGTTGAACCAACCCCCACCCCTAAC...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp CTAAGGAGTGACGTCAAGATGTTGTCTGGCCAGAATTaGCAGATAACCATAGAACTCTTCTCCTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: LRSDVKMLSGQN*QITIELFSSIR
Trigger: CCTGATGGAGGAGAAGAGTTCTATGGTTATCTGCAAATTCTGGCCAGACAACATCTTGACGTCACTCCTTAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 72 bp ATATTATTGGATGTCATACTATTGATAGAGGCCTCCTaGCCAGAACCCCAGTCTAGGTCTAGAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ILLDVILLIEAS*PEPQSRSRGLR
Trigger: TCTCAGGCCTCTAGACCTAGACTGGGGTTCTGGCAAGGAGGCCTCTATCAATAGTATGACATCCAATAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVRLTES*SSPTRF
Trigger: AAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGAPVVV*GWRFEK
Trigger: TTTCTCGAATCTCCAACCTCAGACCACCACTGGTGC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPAPVVV*GWRFEK
Trigger: TTTCTCGAATCTCCAACCTCAGACCACCACTGGTGC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATCCCCATTGTTCATGTaGGTGGGATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWISPLFM*VGLSSW
Trigger: CCAGCTGGATAATCCCACTCACATGAACAATGGGGA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGDRFYQ*RLWKGF
Trigger: AAATCCCTTCCACAGACGTCACTGATAAAACCGGTC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFDRFYQ*RLWKGF
Trigger: AAATCCCTTCCACAGACGTCACTGATAAAACCGGTC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCCCAAATCCAAACCATaGGAAATCTTTCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWPKSKP*EIFHAK
Trigger: TTTGGCATGAAAGATTTCTCATGGTTTGGATTTGGG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304053.10
CDS-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGTGTCTGGCTTGAGCTaGCTGTTGGTGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPVSGLS*LLVMPK
Trigger: CTTTGGCATCACCAACAGTCAGCTCAAGCCAGACAC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGCTGTTTGCCATAGGTaGAAATCTCCCACAACACGA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHAVCHR*KSPTTR
Trigger: TCGTGTTGTGGGAGATTTTCACCTATGGCAAACAGC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTTAATACTGTCAGAGTaGAGGAGAGCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGLILSE*RRAAWW
Trigger: CCACCAAGCTGCTCTCCTTCACTCTGACAGTATTAA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGATGCAGAAGCCAGATTaGTTCAAAAGAAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRMQKPD*FKRKGK
Trigger: CTTACCCTTTCTTTTGAATCAATCTGGCTTCTGCAT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGGGGTCGGAGGGAAGTaGGATCTGAAAAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIGVGGK*DLKSSL
Trigger: CAATGAACTTTTCAGATCTCACTTCCCTCCGACCCC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGACAACGCAGAGACATTaGTACTCAGCTAATAAACTC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRTTQRH*YSANKL
Trigger: GAGTTTATTAGCTGAGTATCAATGTCTCTGCGTTGT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCATGGGTCCTTAATATaGTACATACATGCACATGTA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTHGSLI*YIHAHV
Trigger: TACATGTGCATGTATGTATCATATTAAGGACCCATG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAATGGGGGCGTAGCTTaGTTGGATTCATCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNNGGVA*LDSSCW
Trigger: CCAACAGGATGAATCCAATCAAGCTACGCCCCCATT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGACATCAGGAAATGTATaGGATGTAACTAGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWTSGNV*DVTSLA
Trigger: GGCCAAACTAGTTACATCTCATACATTTCCTGATGT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCCAGCAGGGTTTCCTTaGGGAACATCTATCCATACC +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNPAGFP*GTSIHT
Trigger: GGTATGGATAGATGTTCCTCAAGGAAACCCTGCTGG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTCCAGTGGGATCTTATaGAACAAAACAAAACCTTTC +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVSSGIL*NKTKPF
Trigger: GAAAGGTTTTGTTTTGTTTCATAAGATCCCACTGGA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTATCCATAGGATTCTGTaGAAGGTCTTCATCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLIHRIL*KVFIKQ
Trigger: TTGCTTGATGAAGACCTTTCACAGAATCCTATGGAT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCCTGGCTCACAGCTTaGATTTCATCTCTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFAWLTA*ISSLFQ
Trigger: CTGAAAGAGAGATGAAATTCAAGCTGTGAGCCAGGC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGCCCCCATTGAGCCATaGGTAAATATAATAAGATAT +
Preference number: 4 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVAPIEP*VNIIRY
Trigger: ATATCTTATTATATTTACTCATGGCTCAATGGGGGC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGGGTTACTTGGAGAGTaGGAAGCCAAAAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFGLLGE*EAKSKL
Trigger: GAGTTTGCTTTTGGCTTCTCACTCTCCAAGTAACCC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTACTGCAACACTAGCCTaGATTCAACTTAGAGTTACC +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSTATLA*IQLRVT
Trigger: GGTAACTCTAAGTTGAATTCAGGCTAGTGTTGCAGT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFRFLVR*EWGSGM
Trigger: CATACCGGACCCCCATTCGCATCTAACAAGGAATCT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGLQSRK*HDARRR
Trigger: CCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILQSRK*HDARRR
Trigger: CCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGTAAAATTGATGTGCTaGAGGTTGCTGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTVKLMC*RLLFFR
Trigger: TCTGAAAAACAGCAACCTGCAGCACATCAATTTTAC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAACCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKPQLGI*RFARGI
Trigger: TATTCCCCTGGCAAACCTGCAGATACCCAATTGTGG...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHPQLGI*RFARGI
Trigger: TATTCCCCTGGCAAACCTGCAGATACCCAATTGTGG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGCCACACAAGAGATCTaGTTCCCACTGTCATCGGAT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNATQEI*FPLSSD
Trigger: ATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCCACACAAGAGATCTaGTTCCCACTGTCATCGGAT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIATQEI*FPLSSD
Trigger: ATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTATAGTTGGTGCAAAATaGACAGTGAGGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLIVGAK*TVRLTE
Trigger: TTCTGTCAACCTCACTGTGCATTTTGCACCAACTAT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCATCTGCTGGGCTATATaGAGCATCTGCGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPICWAI*SICDCV
Trigger: GACGCAGTCGCAGATGCTGCATATAGCCCAGCAGAT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTGTCCGAGCACACTATaGGCCATCTTGTGTCTCACG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPCPSTL*AILCLT
Trigger: CGTGAGACACAAGATGGCGCATAGTGTGCTCGGACA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTCCCAAAGTCTCATTTaGCTTAAACAAATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISQSLI*LKQIFA
Trigger: AGCAAAGATTTGTTTAAGGCAAATGAGACTTTGGGA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGATTTTAGAACGAGGATaGCACTCTTCTAAAAATCAG +
Preference number: 4 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLILERG*HSSKNQ
Trigger: CTGATTTTTAGAAGAGTGGCATCCTCGTTCTAAAAT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGAAAATACCCCTTCCTaGACTGTCGTTTCTAACTAT +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRENTPS*TVVSNY
Trigger: ATAGTTAGAAACGACAGTGCAGGAAGGGGTATTTTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGAAGAGGGCATGCTCTaGAAGTACAAACACATCCAG +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKEEGML*KYKHIQ
Trigger: CTGGATGTGTTTGTACTTGCAGAGCATGCCCTCTTC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAACACATGAAGAGGGCATaGTCTGCAAGTACAAACACA +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQHMKRA*SASTNT
Trigger: TGTGTTTGTACTTGCAGAGCATGCCCTCTTCATGTG...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTACTTTACATGCCTCTaGCACAGGGAGTTACTAGCC +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMYFTCL*HRELLA
Trigger: GGCTAGTAACTCCCTGTGGCAGAGGCATGTAAAGTA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACAGTTAAATGATGGCTaGGGGGCATTTGCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSQLNDG*GAFASL
Trigger: AAGGCTTGCAAATGCCCCGCAGCCATCATTTAACTG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATTGAAATGGAAACCGTaGTTGGTTCAGCTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPLKWKP*LVQLLR
Trigger: GCGCAAGAGCTGAACCAAGCACGGTTTCCATTTCAA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIYQRLS*SGAKSV
Trigger: AACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTACAGGAGCATGTAAATaGATTGCCCACCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFTGACK*IAHQDQ
Trigger: CTGATCCTGGTGGGCAATCCATTTACATGCTCCTGT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGAGAAATGTGATAGTTaGTGCAAAATGCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASREKCDS*CKMHSE
Trigger: CTCACTGTGCATTTTGCACCAACTATCACATTTCTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGAGAAATGTGATAGTTaGTGCAAAATGCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLEKCDS*CKMHSE
Trigger: CTCACTGTGCATTTTGCACCAACTATCACATTTCTC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHNGMHQ*WSEVGD
Trigger: ATCTCCAACCTCAGACCACCACTGGTGCATTCCATT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTACATCAGGATAATTTaGGTTTGCACCATCGTCAAT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTYIRII*VCTIVN
Trigger: ATTGACGATGGTGCAAACCCAAATTATCCTGATGTA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATACATCAGGATAATTTaGGTTTGCACCATCGTCAAT +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLYIRII*VCTIVN
Trigger: ATTGACGATGGTGCAAACCCAAATTATCCTGATGTA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGAGTGTTACTCCCATTaGAGATGTGATGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNECYSH*RCDGVG
Trigger: GCCCACTCCATCACATCTCCAATGGGAGTAACACTC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGGAGAGCAGCTTGGTaGCCTCCAGCGGCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRRAAW*PPAAVK
Trigger: TTTAACTGCCGCTGGAGGCCACCAAGCTGCTCTCCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCAGGGAAACGACGTCTaGAGCAGTAGTGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPQGNDV*SSSVCT
Trigger: TGTGCAGACACTACTGCTCCAGACGTCGTTTCCCTG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCCTCAATGTAGTGGGATaGCTTTTATTCAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TKLCPSTLCAILCLTEAILNVVG*LLFSCF
Trigger: AAAACAACTGAATAAAAGCCATCCCACTACATTGAG...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTGGACTGCTCATCATTaGCCTTCAAGCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPWTAHH*PSSHWA
Trigger: AGCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAGATGTATGTTAAGATaGCAAAATAGTTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPRCMLR*QNSCLV
Trigger: CACCAAGCAACTATTTTGCCATCTTAACATACATCT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATGCTGTCAGGTGATGTaGTGTTCAGACACGTCTAAA +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQCCQVM*CSDTSK
Trigger: TTTAGACGTGTCTGAACACCACATCACCTGACAGCA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAGGCATTCCCTAAAGTaGAGACTAGCTGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWRHSLK*RLAVLI
Trigger: TATCAAAACAGCTAGTCTCCACTTTAGGGAATGCCT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGGAAAACAATTCAGGTaGCTGCTTAGTGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPGKQFR*LLSGAI
Trigger: GATGGCACCACTAAGCAGCCACCTGAATTGTTTTCC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGACTCATACATACACGTaGGCAAGCCCTGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMTHTYT*ASPGVS
Trigger: AGAAACTCCAGGGCTTGCCCACGTGTATGTATGAGT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATCTCCCTTTTTGAAATaGAAACCGTGCTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKSPFLK*KPCLVQ
Trigger: CTGAACCAAGCACGGTTTCCATTTCAAAAAGGGAGA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGAGTTACCTCTGCATTaGTGTTCCCCAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFELPLH*CSPITA
Trigger: AGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGTTGAGGGGAGACATTaGTGCAGAATTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFVEGRH*CRIPSK
Trigger: TTTGCTGGGAATTCTGCACCAATGTCTCCCCTCAAC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCTTGCTACCTATTTCTaGAAAGAAAACCTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKLATYF*KENLVG
Trigger: ACCCACTAGGTTTTCTTTCCAGAAATAGGTAGCAAG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAATTCTCAGTTGGTCATaGGGTCAGTTTAGAATACTA +
Preference number: 4 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLILSWS*GQFRIL
Trigger: TAGTATTCTAAACTGACCCCATGACCAACTGAGAAT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAACTGGATTACAGCAAATaGTTGAACATGAAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKLDYSK*LNMKCV
Trigger: CACGCACTTCATGTTCAACCATTTGCTGTAATCCAG...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp ACACAAGGTATTAATCGACGAAGACCATGCACAATTTaGCTTGCACAGTTAAAAGGACGGGTGGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: TQGINRRRPCTI*LAQLKGRVGME
Trigger: TTCCATGCCCACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATTAATACCTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp GACCCAACTCTCATCTCTCATAGGCCAGCATATAACTaGAATGGACGTAAGGTTTATCTTGTCAACTCCCTC +
Preference number: 4 (lower is better)
Translates to: DPTLISHRPAYN*NGRKVYLVNSL
Trigger: GAGGGAGTTGACAAGATAAACCTTACGTCCATTCAAGTTATATGCTGGCCTATGAGAGATGAGAGTTGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp AAAGAAATTAGTGTCAGATATAATAGGAGGAAGGATTaGCTAGGATGTCTCTGGCCACACGGGAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: KEISVRYNRRKD*LGCLWPHGSRT
Trigger: GGTCCTACTCCCGTGTGGCCAGAGACATCCTAGCAAATCCTTCCTCCTATTATATCTGACACTAATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCAGACAAGTCAAGGTaGCGGAAATGTTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSDKSR*RKCFLD
Trigger: GTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTCAGACAAGTCAAGGTaGCGGAAATGTTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSDKSR*RKCFLD
Trigger: GTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATCAGACAAGTCAAGGTaGCGGAAATGTTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSSDKSR*RKCFLD
Trigger: GTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGGCAGTACAAATCCTaGGTGTCTGGACTGGATTTA +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGRQYKS*VSGLDL
Trigger: TAAATCCAGTCCAGACACTCAGGATTTGTACTGCCT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAGGCAGTACAAATCCTaGGTGTCTGGACTGGATTTA +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKRQYKS*VSGLDL
Trigger: TAAATCCAGTCCAGACACTCAGGATTTGTACTGCCT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTCCCCATTGTTCATGTaGGTGGGATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGISPLFM*VGLSSW
Trigger: CCAGCTGGATAATCCCACTCACATGAACAATGGGGA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCTTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGFQASP*SEQKSV
Trigger: AACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAA...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNDRFYQ*RLWKGF
Trigger: AAATCCCTTCCACAGACGTCACTGATAAAACCGGTC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGACTGGGGATTTTCAATaGCAGGGATCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMTGDFQ*QGSWSF
Trigger: GAATGACCAAGATCCCTGTCATTGAAAATCCCCAGT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATACTGGGGATTTTCAATaGCAGGGATCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHTGDFQ*QGSWSF
Trigger: GAATGACCAAGATCCCTGTCATTGAAAATCCCCAGT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGACTGGGGATTTTCAATaGCAGGGATCTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGTGDFQ*QGSWSF
Trigger: GAATGACCAAGATCCCTGTCATTGAAAATCCCCAGT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGTAAAGGGGTCACAGTaGGACAGAGACAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYVKGSQ*DRDKVS
Trigger: GCTCACCTTGTCTCTGTCTCACTGTGACCCCTTTAC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGGGAAGCAAGAGAATTaGGGGTATGTGTGTATATGC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHGKQEN*GYVCIC
Trigger: GCATATACACACATACCCTCAATTCTCTTGCTTCCC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGGCCTAGCTGGCCTATaGATCTGTGCTTATTTACAT +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPGLAGL*ICAYLH
Trigger: ATGTAAATAAGCACAGATTCATAGGCCAGCTAGGCC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATTTCAGTCCTACCTCTaGCCATCAAAATGGACCATG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSFQSYL*PSKWTM
Trigger: CATGGTCCATTTTGATGGTCAGAGGTAGGACTGAAA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTTTCAGTCCTACCTCTaGCCATCAAAATGGACCATG +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMFQSYL*PSKWTM
Trigger: CATGGTCCATTTTGATGGTCAGAGGTAGGACTGAAA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGCATCTCCTTTGGAGTTaGAAAGGGAATATGATATCA +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWHLLWS*KGNMIS
Trigger: TGATATCATATTCCCTTTTCAACTCCAAAGGAGATG...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGCCTCATGTGCTCTGTaGTACTTACCATATGAGAGT +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKASCAL*YLPYES
Trigger: ACTCTCATATGGTAAGTATCACAGAGCACATGAGGC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCCGAGAAGGAAAGTGTaGTTGATTCAGGACATGAGT +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMPRRKV*LIQDMS
Trigger: ACTCATGTCCTGAATCAATCACACTTTCCTTCTCGG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAGTTCTTCCTCATACTaGGACAAGTGGAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMSSSSY*DKWRHK
Trigger: TTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGGCTGTCTCCCTTTTTaGAATGGAAACCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGGCLPF*NGNRAW
Trigger: CCAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCTGCCTGACACAGACTaGACAGAGCATACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGLPDTD*TEHTKV
Trigger: GACCTTTGTATGCTCTGTTCAGTCTGTGTCAGGCAG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCTGGGCCAAGAGACATaGGCGCTGTTGAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLLGQET*ALLKRN
Trigger: ATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTACTTCTAGTGTAGTGTaGAGGAATCAGATTCAAACC +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSTSSVV*RNQIQT
Trigger: GGTTTGAATCTGATTCCTTCACACTACACTAGAAGT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHPGEYS*CFHSGS
Trigger: ACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGAAATGTGATAGTTGGTaGAAAATGCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWKCDSW*KMHSEV
Trigger: AACCTCACTGTGCATTTTGCACCAACTATCACATTT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTAAATGTGATAGTTGGTaGAAAATGCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLKCDSW*KMHSEV
Trigger: AACCTCACTGTGCATTTTGCACCAACTATCACATTT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGATGAGAAATCTTTCATaGCAAACTTGGAGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRMRNLS*QTWSVL
Trigger: CAAGACACTCCAAGTTTGGCATGAAAGATTTCTCAT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277120.8
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAGCCTCCCGTTGGCATaGTGTGCCAAATTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSLPLA*CAKFCI
Trigger: AATACAAAATTTGGCACAGCATGCCAACGGGAGGCT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGATAAAACACACTCCTaGCCTTCAAGAGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSDKTHS*PSREPK
Trigger: CTTGGGTTCTCTTGAAGGGCAGGAGTGTGTTTTATC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAAATTGTATTGGGACCTaGAGAACAGCAGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPNCIGT*RTAAMC
Trigger: GCACATTGCTGCTGTTCTGCAGGTCCCAATACAATT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATCACATAACAGGAACTaGCTCAGCATTCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPSHNRN*LSILSL
Trigger: CAGTGAGAGAATGCTGAGGCAGTTCCTGTTATGTGA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGTGATGATCTTATTCTaGCTGCTACTTGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPVMILF*LLLGHC
Trigger: ACAGTGGCCAAGTAGCAGGCAGAATAAGATCATCAC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAAACAAAACCTTTCATaGCAAACTTGGAGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKKQNLS*QTWSVL
Trigger: CAAGACACTCCAAGTTTGGCATGAAAGGTTTTGTTT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAACAGCTCACAGTATATaGAGGCTTCATATAGTACAG +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKTAHSI*RLHIVQ
Trigger: CTGTACTATATGAAGCCTGCATATACTGTGAGCTGT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCCTGAGAGTTACCTCTaGATTGGTGTTCCCCAATCA +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLPESYL*IGVPQS
Trigger: TGATTGGGGAACACCAATGCAGAGGTAACTCTCAGG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTGCCTGGCATTGAAGTaGCAGAACCTTTATTGGAGA +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFCLALK*QNLYWR
Trigger: TCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGAATGAAATCAGTCCCTaGTGGGAGACTGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLNEISP*WETGRE
Trigger: TTCTCTCCCAGTCTCCCAGCAGGGACTGATTTCATT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPQILSV*TGFSLL
Trigger: CAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSQILSV*TGFSLL
Trigger: CAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGQILSV*TGFSLL
Trigger: CAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGGCCAGATTTGCAGATaGCAAACCACAATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSGQICR*QTTIGY
Trigger: ATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGGCCAGATTTGCAGATaGCAAACCACAATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHGQICR*QTTIGY
Trigger: ATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGGCCAGATTTGCAGATaGCAAACCACAATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFGQICR*QTTIGY
Trigger: ATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYGMHQW*SEVGDS
Trigger: CGAATCTCCAACCTCAGACCACCACTGGTGCATTCC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNNGMHQ*WSEVGD
Trigger: ATCTCCAACCTCAGACCACCACTGGTGCATTCCATT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGCCTTTCACAGTGAATaGAATGCACCAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGAFHSE*NAPVVV
Trigger: GACCACCACTGGTGCATTCCATTCACTGTGAAAGGC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYEPLKR*FGVAFH
Trigger: GTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATCCCATACTCATTCTTaGCTATTAGAGTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQSHTHS*LLECSP
Trigger: GGGACTACACTCTAATAGCCAAGAATGAGTATGGGA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTACATCAGGATAATTTaGGTTTGCACCATCGTCAAT +
Preference number: 4 (lower is better)
Translates to: ELPLHWCSPITAHSICRLYIRII*VCTIVN
Trigger: ATTGACGATGGTGCAAACCCAAATTATCCTGATGTA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACATTACTTCTGTTCGTaGTGTCCCCGATGTCATTCG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIHYFCS*CPRCHS
Trigger: CGAATGACATCGGGGACACCACGAACAGAAGTAATG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTGTGATGGAGTGGGCTaGCAGAGTCATCATCATTGC +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPCDGVG*QSHHHC
Trigger: GCAATGATGATGACTCTGCCAGCCCACTCCATCACA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGGAGATGTGATGGAGTaGGCTGGCAGAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYGDVME*AGRVII
Trigger: GATGATGACTCTGCCAGCCCACTCCATCACATCTCC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGAGTGTTACTCCCATTaGAGATGTGATGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPECYSH*RCDGVG
Trigger: GCCCACTCCATCACATCTCCAATGGGAGTAACACTC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAAATAATGACAGCATCTaGGCCACCTTCCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSNNDSI*ATFRRR
Trigger: TCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTAATAATGACAGCATCTaGGCCACCTTCCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGNNDSI*ATFRRR
Trigger: TCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATT...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGTAGTCCTACCCACGTaGAGTATGGAAGCACTAACA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIVVLPT*SMEALT
Trigger: TGTTAGTGCTTCCATACTCCACGTGGGTAGGACTAC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCTCAATGTAGTGGGATaGCTTTTATTCAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTLNVVG*LLFSCF
Trigger: AAAACAACTGAATAAAAGCCATCCCACTACATTGAG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGCAATGTTCCTTTCCTaGACCATTACAAAAAGTATC +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRAMFLS*TITKSI
Trigger: GATACTTTTTGTAATGGTCCAGGAAAGGAACATTGC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTGGCCTTCAAGCCACTaGGCTGCCAACATTCCAATT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPWPSSH*AANIPI
Trigger: AATTGGAATGTTGGCAGCCCAGTGGCTTGAAGGCCA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTATAACAGTGATATATaGCCAAACCAAAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTYNSDI*PNQRST
Trigger: TGTTGACCTTTGGTTTGGCCATATATCACTGTTATA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCAGCCAAGATGCAGTaGGTCTTAGTAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSAKMQ*VLVKQW
Trigger: CCATTGCTTTACTAAGACCCACTGCATCTTGGCTGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATGCTGTCAGGTGATGTaGTGTTCAGACACGTCTAAA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPCCQVM*CSDTSK
Trigger: TTTAGACGTGTCTGAACACCACATCACCTGACAGCA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATTAAAGTGCAGGCCATaGCCTTCCAAGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSLKCRP*PSKAYK
Trigger: TTTGTATGCCTTGGAAGGCCATGGCCTGCACTTTAA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATTGGATTCATCCTGTTaGTACACACACTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPLDSSC*YTHSSQ
Trigger: CTGACTGGAGTGTGTGTACCAACAGGATGAATCCAA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATTGGATTCATCCTGTTaGTACACACACTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSLDSSC*YTHSSQ
Trigger: CTGACTGGAGTGTGTGTACCAACAGGATGAATCCAA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACAAGAAAAACTCCGGTaGTGCCATCTCTACTTAACC +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSQEKLR*CHLYLT
Trigger: GGTTAAGTAGAGATGGCACCACCGGAGTTTTTCTTG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATTTCCTTCCTGGCCGTaGGTTAGAGAAAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPFPSWP*VRESVS
Trigger: AGAAACACTTTCTCTAACCCACGGCCAGGAAGGAAA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGACTGGTGGAATTACATaGGACTTTTCGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWTGGIT*DFSFHL
Trigger: AAGATGAAACGAAAAGTCCCATGTAATTCCACCAGT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATACTCATACATACACGTaGGCAAGCCCTGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNTHTYT*ASPGVS
Trigger: AGAAACTCCAGGGCTTGCCCACGTGTATGTATGAGT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGCTGATAACGGAGGCTaGGCCTTTCATGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPADNGG*AFHAKL
Trigger: AAGTTTGGCATGAAAGGCCCAGCCTCCGTTATCAGC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAACTTGCTACCTATTTCTaGAAAGAAAACCTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKLATYF*KENLVG
Trigger: ACCCACTAGGTTTTCTTTCCAGAAATAGGTAGCAAG...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp AGCTCTGGACATGAATCCACCTCTTTTCAACTGAAGTaGACAAAGGTTCTGTGGATAGCGCTTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: SSGHESTSFQLK*TKVLWIALEKQ
Trigger: TTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp GCTACTAGCAGCTTTTATGATGCTTGCTCCAGTACATaGAACGTTCAGCTAACCTCCACTCAGGATCATTTT +
Preference number: 4 (lower is better)
Translates to: ATSSFYDACSST*NVQLTSTQDHF
Trigger: AAAATGATCCTGAGTGGAGGTTAGCTGAACGTTCAATGTACTGGAGCAAGCATCATAAAAGCTGCTAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp ACACTTAATAGAGTGGTTACTTCTGTACTAATTTCCTaGGAGTCAAGTCAGCTAAGCTGCGCAACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLNRVVTSVLIS*ESSQLSCATPR
Trigger: CCTTGGAGTTGCGCAGCTTAGCTGACTTGACTCCAAGGAAATTAGTACAGAAGTAACCACTCTATTAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHPWYSV*LVTCIL
Trigger: TAAAATACATGTTACCAATCACACGGAGTACCACGG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPPWYSV*LVTCIL
Trigger: TAAAATACATGTTACCAATCACACGGAGTACCACGG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTGTCGCTTGATGTGCTaGACAAATGTGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPCRLMC*TNVSGL
Trigger: CAAGCCAGACACATTTGTTCAGCACATCAAGCGACA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTATCACCTCATTGTTTaGCAGCTGGTACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYYHLIV*QLVPGL
Trigger: CAGCCCTGGTACCAGCTGTCAAACAATGAGGTGATA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGGCCAGCATATAACTTaGATGGACGTAAGGTTTATC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHGQHIT*MDVRFI
Trigger: GATAAACCTTACGTCCATTCAAGTTATATGCTGGCC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATCTAAACGAGCTAGTTaGGTTAAAGACCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPSKRAS*VKDQLQ
Trigger: CTGGAGTTGGTCTTTAACTCAACTAGCTCGTTTAGA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAACAACACAGCTGCCCTTaGGCTGAGTTTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKQHSCP*AEFVNF
Trigger: AAAATTTACAAACTCAGCTCAAGGGCAGCTGTGTTG...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATCCAGTGGGATCTTATaGAACAAAACAAAACCTTTC +
Preference number: 4 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKSSGIL*NKTKPF
Trigger: GAAAGGTTTTGTTTTGTTTCATAAGATCCCACTGGA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGAAGCTTTCCTACCCATaGAAACCCAGCAGTATGACA +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLKLSYP*KPSSMT
Trigger: TGTCATACTGCTGGGTTTTCATGGGTAGGAAAGCTT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTTTTAAGGCATGGGTATaGAGTAGCCAAGTGAAATGC +
Preference number: 4 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFFKAWV*SSQVKC
Trigger: GCATTTCACTTGGCTACTTCATACCCATGCCTTAAA...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGTTAGGAGGAAAACTTaGGAACTGGCGGCATGTTTC +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGVRRKT*ELAACF
Trigger: GAAACATGCCGCCAGTTCTCAAGTTTTCCTCCTAAC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPRFLVR*EWGSGM
Trigger: CATACCGGACCCCCATTCGCATCTAACAAGGAATCT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGGEYSC*FHSGST
Trigger: TGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPPQLGI*RFARGI
Trigger: TATTCCCCTGGCAAACCTGCAGATACCCAATTGTGG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGCCACACAAGAGATCTaGTTCCCACTGTCATCGGAT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYATQEI*FPLSSD
Trigger: ATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTAAATGTGATAGTTGGTaGAAAATGCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSKCDSW*KMHSEV
Trigger: AACCTCACTGTGCATTTTGCACCAACTATCACATTT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGGACTCATTCAATATTaGCCCGTTATAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPGLIQY*PVIEPL
Trigger: CAGTGGTTCTATAACGGGGCAATATTGAATGAGTCC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGGACTCATTCAATATTaGCCCGTTATAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMGLIQY*PVIEPL
Trigger: CAGTGGTTCTATAACGGGGCAATATTGAATGAGTCC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGGACTCATTCAATATTaGCCCGTTATAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHGLIQY*PVIEPL
Trigger: CAGTGGTTCTATAACGGGGCAATATTGAATGAGTCC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACCCGATGTCATTCGCTaGAGTTCCATAATCTTCATA +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSPDVIR*SSIIFI
Trigger: TATGAAGATTATGGAACTGCAGCGAATGACATCGGG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCTTCAGGGTCTTCACTaGCACCAAGATCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYLQGLH*HQDLVL
Trigger: CAGGACAAGATCTTGGTGGCAGTGAAGACCCTGAAG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGATCTTTGCTCTCTACTaGACGCTATCATTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGIFALY*TLSFLV
Trigger: CACCAGAAATGATAGCGTGCAGTAGAGAGCAAAGAT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAATCGACGAAGACCATaGACAATTTTGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHNRRRP*TILLAQ
Trigger: CTGTGCAAGCAAAATTGTGCATGGTCTTCGTCGATT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTCCCAAAGTCTCATTTaGCTTAAACAAATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRSQSLI*LKQIFA
Trigger: AGCAAAGATTTGTTTAAGGCAAATGAGACTTTGGGA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCCACCCATGCAGTACTaGACAGAGTTGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPPPMQY*TELKSV
Trigger: CACACTTTTCAACTCTGTGCAGTACTGCATGGGTGG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTGTGGGGTCTTGGACTaGTCATCATTGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYCGVLD*SSLAFK
Trigger: CTTGAAGGCCAATGATGAGCAGTCCAAGACCCCACA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGTCATTAGAGCACACTaGTTTGTCTTGGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPVIRAH*FVLERQ
Trigger: TTGCCTTTCCAAGACAAAGCAGTGTGCTCTAATGAC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTATGTTCAAAACCTCTaGGGTTCTGTGAAAAATATC +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWYVQNL*GSVKNI
Trigger: GATATTTTTCACAGAACCGCAGAGGTTTTGAACATA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTCACATAACAGGAACTaGCTCAGCATTCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNSHNRN*LSILSL
Trigger: CAGTGAGAGAATGCTGAGGCAGTTCCTGTTATGTGA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTATAATACACCCAATGTaGTTCCTACACACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGIIHPM*FLHTVQ
Trigger: CTGCACAGTGTGTAGGAAGCACATTGGGTGTATTAT...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAACACAGGCCTCATGTaGTCTGTGATACTTACCATA +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMNTGLM*SVILTI
Trigger: TATGGTAAGTATCACAGAGCACATGAGGCCTGTGTT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTTGAAATGGAAACCGTaGTTGGTTCAGCTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILKWKP*LVQLLR
Trigger: GCGCAAGAGCTGAACCAAGCACGGTTTCCATTTCAA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCTGCTTTTGAGAAACTaGCCCTCTTTAAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGLLLRN*PSLRHG
Trigger: CCCATGCCTTAAAGAGGGGCAGTTTCTCAAAAGCAG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGGCCAGATTTGCAGATaGCAAACCACAATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIGQICR*QTTIGY
Trigger: ATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCCCATACTCATTCTTaGCTATTAGAGTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSHTHS*LLECSP
Trigger: GGGACTACACTCTAATAGCCAAGAATGAGTATGGGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAATCCCATACTCATTCTTaGCTATTAGAGTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKSHTHS*LLECSP
Trigger: GGGACTACACTCTAATAGCCAAGAATGAGTATGGGA...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATACCTTCCGAAGAAGATaGAGTGTTACTCCCATTGGA +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNTFRRR*SVTPIG
Trigger: TCCAATGGGAGTAACACTCCATCTTCTTCGGAAGGT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGTGATGCCAAAGTACTaGGGATTTTCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNVMPKY*GFSMTG
Trigger: CCCTGTCATTGAAAATCCCCAGTACTTTGGCATCAC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGTGATGCCAAAGTACTaGGGATTTTCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIVMPKY*GFSMTG
Trigger: CCCTGTCATTGAAAATCCCCAGTACTTTGGCATCAC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAAGACAAAACTGGAATaGGATGCTCCCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGKTKLE*DAPKVS
Trigger: TGAGACTTTGGGAGCATCCCATTCCAGTTTTGTCTT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTTGTCAGACCAGGTTTaGGCTAGAGAATTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGLSDQV*ARELGL
Trigger: CAAACCTAATTCTCTAGCCCAAACCTGGTCTGACAA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATACTAACTTAGACATTTaGAGAGTTGGGTCACTAGCC +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHTNLDI*RVGSLA
Trigger: GGCTAGTGACCCAACTCTCCAAATGTCTAAGTTAGT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACGTCAAGATGTTGTCTaGCCAGAATTTGCAGATAAC +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSRQDVV*PEFADN
Trigger: GTTATCTGCAAATTCTGGCCAGACAACATCTTGACG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGATTAACTATAATAGCTaGAGAAGTATGGCACACTCT +
Preference number: 4 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWINYNS*RSMAHS
Trigger: AGAGTGTGCCATACTTCTCCAGCTATTATAGTTAAT...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGATCTAATGAGCTTCTaGGGTCCTGGATGTAATTCA +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKDLMSF*GPGCNS
Trigger: TGAATTACATCCAGGACCCCAGAAGCTCATTAGATC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGAGTTACCTCTGCATTaGTGTTCCCCAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIELPLH*CSPITA
Trigger: AGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTCCTTTTTATATCAAGTaGTACCTAAATGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSPFYIK*YLNGSW
Trigger: CCAGGATCCATTTAGGTACCACTTGATATAAAAAGG...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTGTAAATCAACACCTTTaGGAAAGATCGGAATCTAAG +
Preference number: 4 (lower is better)
Translates to: KFPSATVIVMELSWAGSSVNQHL*ERSESK
Trigger: CTTAGATTCCGATCTTTCCCAAAGGTGTTGATTTAC...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGACCATCAAAATCAGGTaGCTGGGACGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLTIKIR*LGRSFV
Trigger: GACAAAAGAACGTCCCAGCCACCTGATTTTGATGGT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp TTCAAGCCACTGGGCTGCCAACATTCCAATTTATATTaGGAATGCTTGAACTCTGAACTCAAGTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: FKPLGCQHSNLY*ECLNSELKCKG
Trigger: CCCTTTACACTTGAGTTCAGAGTTCAAGCATTCCAAATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp AGTGATCATCTGCTTCAGTTGAGCAATAAACTGCATTaGGAGTTATCTGGAGTGATGACCCTAAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: SDHLLQLSNKLH*ELSGVMTLNES
Trigger: GCTCTCATTTAGGGTCATCACTCCAGATAACTCCAAATGCAGTTTATTGCTCAACTGAAGCAGATGATCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTA +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLPWYSV*LVTCIL
Trigger: TAAAATACATGTTACCAATCACACGGAGTACCACGG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYDRFYQ*RLWKGF
Trigger: AAATCCCTTCCACAGACGTCACTGATAAAACCGGTC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGGCCAGCATATAACTTaGATGGACGTAAGGTTTATC +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIGQHIT*MDVRFI
Trigger: GATAAACCTTACGTCCATTCAAGTTATATGCTGGCC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATACTTCTAAATGGAAATaGTTGTCAGACCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHTSKWK*LSDQVW
Trigger: CCAAACCTGGTCTGACAATCATTTCCATTTAGAAGT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATATACCAGGTCACGATTaGAGGGGAAATATATCTGTA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHIPGHD*RGNISV
Trigger: TACAGATATATTTCCCCTTCAATCGTGACCTGGTAT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAATCACTCTGTCTCCCTaGCCTAAATCCATAATCTTT +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKITLSP*PKSIIF
Trigger: AAAGATTATGGATTTAGGTCAGGGAGACAGAGTGAT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTAAGATAGAGAAAATGTaGGACCAGTTAGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGKIEKM*DQLVHL
Trigger: CAGATGGACTAACTGGTCTCACATTTTCTCTATCTT...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAATATGCGTTTGGCTCTaGATGATCAACTACATCACA +
Preference number: 4 (lower is better)
Translates to: RALEGILGEEDNPILLAKICVWL*MINYIT
Trigger: TGTGATGTAGTTGATCATTCAGAGCCAAACGCATAT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGTAATGCAAACAGCATaGGATACTGTGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIVMQTA*DTVAFS
Trigger: TGAGAAGGCCACAGTATCTCATGCTGTTTGCATTAC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGPGEYS*CFHSGS
Trigger: ACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGG...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRCGQI*RWQTTI
Trigger: AATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGCCCGATGTCATTCGCTaGAGTTCCATAATCTTCATA +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLPDVIR*SSIIFI
Trigger: TATGAAGATTATGGAACTGCAGCGAATGACATCGGG...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGACCTTTTTATGGATCTaGTCTACCTATCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGTFLWI*STYQGN
Trigger: GTTTCCCTGATAGGTAGAGCAGATCCATAAAAAGGT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTATACTGTTAGTTGGTaGATTCACTCTAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGYTVSW*IHSRMW
Trigger: CCACATCCTAGAGTGAATGCACCAACTAACAGTATA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAGATGGCAAAATAGTTaGTTGGTGGTGGTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIRWQNS*LVVVVV
Trigger: CACAACAACCACCACCAAGCAACTATTTTGCCATCT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGCTTTGTTATAATAGCTaGCGTAAAGGATTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMLCYNS*RKGLSL
Trigger: GAGGCTCAATCCTTTACGGCAGCTATTATAACAAAG...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGTCCAGTACAAACAAATaGAAGGACACATATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMSSTNK*KDTYGQ
Trigger: CTGACCATATGTGTCCTTGCATTTGTTTGTACTGGA...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAACATAGGAAGAGAATaGAAGTCATGTGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMNIGRE*KSCVRS
Trigger: GGACCTAACACATGACTTGCATTCTCTTCCTATGTT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGTGGGAAATTTCCTTCTaGGACAGTCATTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLWEISF*DSHCHG
Trigger: TCCATGACAATGACTGTCGCAGAAGGAAATTTCCCA...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCTGGATTTAGCCTCTTaGAGAGTCTTGATCCACATA +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLDLAS*RVLIHI
Trigger: TATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPQILSV*TGFSLL
Trigger: CAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAAGGAGCCCTGTGTGTaGCTTGTTTCATTCATATGT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNKEPCV*LVSFIC
Trigger: ACATATGAATGAAACAAGCCACACACAGGGCTCCTT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYHCSCE*DYPAGG
Trigger: GCCTCCAGCTGGATAATCCCACTCACATGAACAATG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCATTACTTCTGTTCGTaGTGTCCCCGATGTCATTCG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYHYFCS*CPRCHS
Trigger: CGAATGACATCGGGGACACCACGAACAGAAGTAATG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAATAATGACAGCATCTaGGCCACCTTCCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPNNDSI*ATFRRR
Trigger: TCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCTGAACAAATGTGTCTaGCTTGAGCTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPLNKCV*LELTVG
Trigger: ACCAACAGTCAGCTCAAGCCAGACACATTTGTTCAG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGACTGCAGTTGCTACTaGATTTCCTTTTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGDCSCY*ISFCSV
Trigger: AACAGAACAAAAGGAAATCCAGTAGCAACTGCAGTC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCCTGTTCAAACACATaGCTACTAGCAGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSCSNT*LLAAFM
Trigger: CATAAAAGCTGCTAGTAGCCATGTGTTTGAACAGGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACATCAAAATGGACCATaGTCATTCGATTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPHQNGP*SFDCTE
Trigger: TTCAGTGCAATCGAATGACCATGGTCCATTTTGATG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTCATCAAAATGGACCATaGTCATTCGATTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGHQNGP*SFDCTE
Trigger: TTCAGTGCAATCGAATGACCATGGTCCATTTTGATG...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAGGAAATTTAGGAATATaGCACTCAGTCCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPGNLGI*HSVQMP
Trigger: TGGCATTTGGACTGAGTGCCATATTCCTAAATTTCC...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGTAATATGTAGGAAGTaGCAGAGCATATACACAATC +
Preference number: 4 (lower is better)
Translates to: HDERSGDHWTANSIKFKQVICRK*QSIYTI
Trigger: GATTGTGTATATGCTCTGCCACTTCCTACATATTAC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTCCAAAAGTAAATAGATaGCATGGGGACCATATGAAC +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGPKVNR*HGDHMN
Trigger: GTTCATATGGTCCCCATGCCATCTATTTACTTTTGG...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAAATTCCAAGCTCCATTaGTCACTCATACATACACGT +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPNSKLH*SLIHTR
Trigger: ACGTGTATGTATGAGTGACCAATGGAGCTTGGAATT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCTTTCCAATCCAGCTATaGCGTCTGTGTGCATGTCTA +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGFPIQL*RLCACL
Trigger: TAGACATGCACACAGACGCCATAGCTGGATTGGAAA...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCATAAGATATAGGACGTaGACCACATTAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIIRYRT*TTLRAP
Trigger: GGGTGCCCTTAATGTGGTCCACGTCCTATATCTTAT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCAGACCCTATGCTAGATaGAATTGCTTGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIRPYAR*NCLSSV
Trigger: GACTGAGGACAAGCAATTCCATCTAGCATAGGGTCT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTCAAAATCAGGTGGCTaGGACGTTCTTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGISKSGG*DVLLSL
Trigger: CAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGGCAGTACAAATCCTaGGTGTCTGGACTGGATTTA +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRQYKS*VSGLDL
Trigger: TAAATCCAGTCCAGACACTCAGGATTTGTACTGCCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCCCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTA +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIPWYSV*LVTCIL
Trigger: TAAAATACATGTTACCAATCACACGGAGTACCACGG...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAATGCAGAAGCCAGATTaGTTCAAAAGAAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIMQKPD*FKRKGK
Trigger: CTTACCCTTTCTTTTGAATCAATCTGGCTTCTGCAT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAACTTCTAAATGGAAATaGTTGTCAGACCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWITSKWK*LSDQVW
Trigger: CCAAACCTGGTCTGACAATCATTTCCATTTAGAAGT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGATTCATTCCAGCCCTaGCAACAAGAAAATACCCCT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYDSFQP*QQENTP
Trigger: AGGGGTATTTTCTTGTTGTCAGGGCTGGAATGAATC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCAAGAACCTTTGACTTaGGCAGCAGTGATTCATTCC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYQEPLT*AAVIHS
Trigger: GGAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTGGTGGTGGTTGTTGTaGAATTCACAGTGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYWWWLL*NSQCFA
Trigger: GGCAAAACACTGTGAATTTCACAACAACCACCACCA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCATTCAGGTGTCACTTTaGAATCAGCCAAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPIQVSL*NQPRCS
Trigger: ACTGCATCTTGGCTGATTTCAAAGTGACACCTGAAT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATATCACTCTGTCTCCCTaGCCTAAATCCATAATCTTT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNITLSP*PKSIIF
Trigger: AAAGATTATGGATTTAGGTCAGGGAGACAGAGTGAT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTCACTGATGCTTTGGTaGAATTGGACTGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNSLMLW*NWTEMS
Trigger: AGACATTTCAGTCCAATTTCACCAAAGCATCAGTGA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAACAATCTCCCCAAAGTaGGCCATTACTATAGAAATA +
Preference number: 4 (lower is better)
Translates to: LLSQAGRISKDREKLHFPTISPK*AITIEI
Trigger: TATTTCTATAGTAATGGCTCACTTTGGGGAGATTGT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAGACTGAAGACCAAATaGCTTGCAAAAGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMRLKTK*LAKVNS
Trigger: AGAGTTTACTTTTGCAAGTCATTTGGTCTTCAGTCT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGTAAAATTGATGTGCTaGAGGTTGCTGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGVKLMC*RLLFFR
Trigger: TCTGAAAAACAGCAACCTGCAGCACATCAATTTTAC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIGEYSC*FHSGST
Trigger: TGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAATAGTTGGTGCAAAATaGACAGTGAGGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIIVGAK*TVRLTE
Trigger: TTCTGTCAACCTCACTGTGCATTTTGCACCAACTAT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAAAATGTGATAGTTGGTaGAAAATGCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSKCDSW*KMHSEV
Trigger: AACCTCACTGTGCATTTTGCACCAACTATCACATTT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGGACTCATTCAATATTaGCCCGTTATAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPGLIQY*PVIEPL
Trigger: CAGTGGTTCTATAACGGGGCAATATTGAATGAGTCC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCCCGATGTCATTCGCTaGAGTTCCATAATCTTCATA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPPDVIR*SSIIFI
Trigger: TATGAAGATTATGGAACTGCAGCGAATGACATCGGG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGCCTCCCGTTGGCATaGTGTGCCAAATTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYSLPLA*CAKFCI
Trigger: AATACAAAATTTGGCACAGCATGCCAACGGGAGGCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTCGCTTGACTGCAGTTaGTACTGGATTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPSLDCS*YWISFC
Trigger: ACAAAAGGAAATCCAGTAGCAACTGCAGTCAAGCGA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAGATGGCAAAATAGTTaGTTGGTGGTGGTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPRWQNS*LVVVVV
Trigger: CACAACAACCACCACCAAGCAACTATTTTGCCATCT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCTTTGTTATAATAGCTaGCGTAAAGGATTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNLCYNS*RKGLSL
Trigger: GAGGCTCAATCCTTTACGGCAGCTATTATAACAAAG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCAAGGAGCCCTGTGTGTaGCTTGTTTCATTCATATGT +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGKEPCV*LVSFIC
Trigger: ACATATGAATGAAACAAGCCACACACAGGGCTCCTT...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGAGAAATGTGATAGTTaGTGCAAAATGCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNEKCDS*CKMHSE
Trigger: CTCACTGTGCATTTTGCACCAACTATCACATTTCTC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTCCCATACTCATTCTTaGCTATTAGAGTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPSHTHS*LLECSP
Trigger: GGGACTACACTCTAATAGCCAAGAATGAGTATGGGA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCATACATCAGGATAATTTaGGTTTGCACCATCGTCAAT +
Preference number: 4 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSYIRII*VCTIVN
Trigger: ATTGACGATGGTGCAAACCCAAATTATCCTGATGTA...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAGTCATACCTTTTTATaGATCTGCTCTACCTATCAG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSHTFL*ICSTYQ
Trigger: CTGATAGGTAGAGCAGATCCATAAAAAGGTATGACT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCACTAACTTAGACATTTaGAGAGTTGGGTCACTAGCC +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPTNLDI*RVGSLA
Trigger: GGCTAGTGACCCAACTCTCCAAATGTCTAAGTTAGT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGTCTTAGTAAAGCAATaGACCTCAAAACAGATTGCA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHVLVKQ*TSKQIA
Trigger: TGCAATCTGTTTTGAGGTCCATTGCTTTACTAAGAC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATACAGGTTGAGAGAAGCTaGTCACATGATTTACAAACA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIQVERS*SHDLQT
Trigger: TGTTTGTAAATCATGTGACCAGCTTCTCTCAACCTG...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGTAATATGTAGGAAGTaGCAGAGCATATACACAATC +
Preference number: 4 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGVICRK*QSIYTI
Trigger: GATTGTGTATATGCTCTGCCACTTCCTACATATTAC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
3UTR CAA 72 bp CTCCTGAGATGTATGTTAAGATGGCAAAATAGTTGCTaGGTGGTGGTTGTTGTGAAATTCACAGTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LLRCMLRWQNSC*VVVVVKFTVFC
Trigger: GCAAAACACTGTGAATTTCACAACAACCACCACCAAGCAACTATTTTGCCATCTTAACATACATCTCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp AAGAACTTGGAGGCAAAAAGTGATCATCTGCTTCAGTaGAGCAATAAACTGCATTTGGAGTTATCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KNLEAKSDHLLQ*SNKLHLELSGV
Trigger: CACTCCAGATAACTCCAAATGCAGTTTATTGCTCAACTGAAGCAGATGATCACTTTTTGCCTCCAAGTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIRLTES*SSPTRF
Trigger: AAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTACTGTGTCTATGGATaGAGAAGTACACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYYCVYG*RSTHCF
Trigger: GAAGCAGTGTGTACTTCTTCATCCATAGACACAGTA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCACAAAAACAGCATACTaGCAATGGAGTACACTTGGA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPTKTAY*QWSTLG
Trigger: TCCAAGTGTACTCCATTGTCAGTATGCTGTTTTTGT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGAAGGCCGTATTTGGTaGTCATTACATTTTAGAACG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPEGRIW*SLHFRT
Trigger: CGTTCTAAAATGTAATGATCACCAAATACGGCCTTC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGTAAAATTGATGTGCTaGAGGTTGCTGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIVKLMC*RLLFFR
Trigger: TCTGAAAAACAGCAACCTGCAGCACATCAATTTTAC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATCGGGTAAAATTGATGTaGTGCAGGTTGCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRVKLM*CRLLFF
Trigger: GAAAAACAGCAACCTGCAGCACATCAATTTTACCCG...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAAATGTGATAGTTGGTaGAAAATGCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIKCDSW*KMHSEV
Trigger: AACCTCACTGTGCATTTTGCACCAACTATCACATTT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTGGAGCAGTAGTGTCTaGACACAAGGTATTAATCGA +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYWSSSV*TQGINR
Trigger: TCGATTAATACCTTGTGTGCAGACACTACTGCTCCA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGTTTTTGTACAAATCTaGCCCTTCCTTACTGCGTCA +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYVFVQI*PFLTAS
Trigger: TGACGCAGTAAGGAAGGGGCAGATTTGTACAAAAAC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATATTTTAGAACGAGGATaGCACTCTTCTAAAAATCAG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHILERG*HSSKNQ
Trigger: CTGATTTTTAGAAGAGTGGCATCCTCGTTCTAAAAT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTTCAAGCCACTGGGCTaGCAACATTCCAATTTATAT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPFKPLG*QHSNLY
Trigger: ATATAAATTGGAATGTTGGCAGCCCAGTGGCTTGAA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGAAAATACCCCTTCCTaGACTGTCGTTTCTAACTAT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPENTPS*TVVSNY
Trigger: ATAGTTAGAAACGACAGTGCAGGAAGGGGTATTTTC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAGCTTTTATGATGCTTaGTCCAGTACATTGAACGTT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWISFYDA*SSTLNV
Trigger: AACGTTCAATGTACTGGAGCAAGCATCATAAAAGCT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCATGCCAAAGCTATACTaGAACACTAGCCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGMPKLY*NTSLNS
Trigger: TGAATTCAGGCTAGTGTTGCAGTATAGCTTTGGCAT...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATACATCAGGATAATTTaGGTTTGCACCATCGTCAAT +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIYIRII*VCTIVN
Trigger: ATTGACGATGGTGCAAACCCAAATTATCCTGATGTA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTTGACAAAGGTTCTGTaGATAGCGCTTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPLTKVL*IALEKQ
Trigger: TTGTTTCTCAAGCGCTATCCACAGAACCTTTGTCAA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGTGACAAACCTGTGTTaGTTTTTGCTGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPVTNLC*FLLMES
Trigger: AGATTCCATCAGCAAAAACCAACACAGGTTTGTCAC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCAATGTAGTGGGATaGCTTTTATTCAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLNVVG*LLFSCF
Trigger: AAAACAACTGAATAAAAGCCATCCCACTACATTGAG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATTCTATACTGTTAGTTaGTGCATTCACTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIFYTVS*CIHSRM
Trigger: CATCCTAGAGTGAATGCACCAACTAACAGTATAGAA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTATAACAGTGATATATaGCCAAACCAAAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHYNSDI*PNQRST
Trigger: TGTTGACCTTTGGTTTGGCCATATATCACTGTTATA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAGATGTATGTTAAGATaGCAAAATAGTTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHRCMLR*QNSCLV
Trigger: CACCAAGCAACTATTTTGCCATCTTAACATACATCT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGTCTTAGTAAAGCAATaGACCTCAAAACAGATTGCA +
Preference number: 4 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIVLVKQ*TSKQIA
Trigger: TGCAATCTGTTTTGAGGTCCATTGCTTTACTAAGAC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATCCAAGATTGATGATTTaGGGATTTTGCTGGTTAGTA +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNPRLMI*GFCWLV
Trigger: TACTAACCAGCAAAATCCCCAAATCATCAATCTTGG...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATACTGGTGGAATTACATaGGACTTTTCGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNTGGIT*DFSFHL
Trigger: AAGATGAAACGAAAAGTCCCATGTAATTCCACCAGT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CCA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGTTAACTCTAACTGGTaGAATTACATGGGACTTTTC +
Preference number: 4 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNVNSNW*NYMGLF
Trigger: GAAAAGTCCCATGTAATTCCACCAGTTAGAGTTAAC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGRLTES*SSPTRF
Trigger: AAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCT...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATACTTCTAAATGGAAATaGTTGTCAGACCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYTSKWK*LSDQVW
Trigger: CCAAACCTGGTCTGACAATCATTTCCATTTAGAAGT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGTAAAATTGATGTGCTaGAGGTTGCTGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIVKLMC*RLLFFR
Trigger: TCTGAAAAACAGCAACCTGCAGCACATCAATTTTAC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATATGCACAATTTTGCTTaGACAGTTAAAAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYMHNFA*TVKRTG
Trigger: ACCCGTCCTTTTAACTGTGCAAGCAAAATTGTGCAT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGATACAGAAGCAAATaGAGAATGTCCACATCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRYRSK*RMSTSP
Trigger: TGGAGATGTGGACATTCTGCATTTGCTTCTGTATCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCAAACAAAACCTTTCATaGCAAACTTGGAGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIKQNLS*QTWSVL
Trigger: CAAGACACTCCAAGTTTGGCATGAAAGGTTTTGTTT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCACAAAAGTAATAAACTaGCAGCCCACAGACTTTTGT +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGITKVIN*QPTDFC
Trigger: ACAAAAGTCTGTGGGCTGCCAGTTTATTACTTTTGT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp AAATACACTGTAGTACAAGAGACTTTCCATGTCAGGTaGAGAGAAGCTGGTCACATGATTTACAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: KYTVVQETFHVR*REAGHMIYKQN
Trigger: GTTTTGTTTGTAAATCATGTGACCAGCTTCTCTCAACCTGACATGGAAAGTCTCTTGTACTACAGTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
3UTR CAA 72 bp ATGAGCTTCTGGGGTCCTGGATGTAATTCAGAATTTTaGCTCATGTGTACTCAAAGTAATGTTGCAAATATG +
Preference number: 4 (lower is better)
Translates to: MSFWGPGCNSEF*LMCTQSNVANM
Trigger: CATATTTGCAACATTACTTTGAGTACACATGAGCAAAAATTCTGAATTACATCCAGGACCCCAGAAGCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRLTES*SSPTRF
Trigger: AAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR TCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGCACTTTTGAATTTTTaGGAATTGGCTTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYALLNF*ELAFKA
Trigger: GGCTTTGAAAGCCAATTCTCAAAAATTCAAAAGTGC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGTAAAATTGATGTGCTaGAGGTTGCTGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYVKLMC*RLLFFR
Trigger: TCTGAAAAACAGCAACCTGCAGCACATCAATTTTAC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAAATGTGATAGTTGGTaGAAAATGCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYKCDSW*KMHSEV
Trigger: AACCTCACTGTGCATTTTGCACCAACTATCACATTT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCATTTTAGAACGAGGATaGCACTCTTCTAAAAATCAG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPILERG*HSSKNQ
Trigger: CTGATTTTTAGAAGAGTGGCATCCTCGTTCTAAAAT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR GCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGCTTTTATGATGCTTaGTCCAGTACATTGAACGTT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYSFYDA*SSTLNV
Trigger: AACGTTCAATGTACTGGAGCAAGCATCATAAAAGCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAGATGTATGTTAAGATaGCAAAATAGTTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPRCMLR*QNSCLV
Trigger: CACCAAGCAACTATTTTGCCATCTTAACATACATCT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTGTGTGTATACGGCCTaGATATATACAAACATCTCT +
Preference number: 4 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYCVYTA*IYTNIS
Trigger: AGAGATGTTTGTATATATCCAGGCCGTATACACACA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CCA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCATTTCTGCTATTAGCTaGCCTCTTTGTAAATCAACA +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIISAIS*PLCKST
Trigger: TGTTGATTTACAAAGAGGCCAGCTAATAGCAGAAAT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CCA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCATTTCTGCTATTAGCTaGCCTCTTTGTAAATCAACA +
Preference number: 4 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGISAIS*PLCKST
Trigger: TGTTGATTTACAAAGAGGCCAGCTAATAGCAGAAAT...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
3UTR CAA 72 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTaGCGTTTCTTAGGAATCTCTTGTTACTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: KWLNMKCVKLKD*RFLGISCYFVC
Trigger: ACATACAAAGTAACAAGAGATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS TCA 90 bp CCCGCCGGCGGCGCCTGGGTCCAGGCTCCTGCTACCGCCGGGGACTaGGCGCGTAGAGCGCGAGCGAAGCAGCCAGCGAGGCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: PAGGAWVQAPATAGD*ARRARAKQPARLLL
Trigger: GAGCAGGAGCCTCGCTGGCTGCTTCGCTCGCGCTCTACGCGCTCAGTCCCCGGCGGTAGCAGGAGCCTGGACCCAGGCGCCGCCGGCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 90 bp CGGCGGCGCTCCCGGGACTCTCTGGGGCGCAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATGCACCTCGAGGCCGGGCTCCGGCGC +
Preference number: 5 (lower is better)
Translates to: RRRSRDSLGRRFLVR*EWGSGMHLEAGLRR
Trigger: GCGCCGGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGCGCCGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 90 bp CACCTTATCCAGGACGACATCCCTAGCAGCCAGTGCCAGCCCGAGTaGCTGTCCCCGCGCTGCACCGGCCGCTTTCCCCCACCCGTGCGG +
Preference number: 5 (lower is better)
Translates to: HLIQDDIPSSQCQPE*LSPRCTGRFPPPVR
Trigger: CCGCACGGGTGGGGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGATGTCGTCCTGGATAAGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp ACCGGCCGCTTTCCCCCACCCGTGCGGGGAGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCGGTGCTTGTTGCGGGCGTGCCGAGT +
Preference number: 5 (lower is better)
Translates to: TGRFPPPVRGGLPCA*GSLNSSVLVAGVPS
Trigger: ACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAAGCGGCCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp GCGGGTCCATGCCACCTTATCCAGGACGACATCCCTAGCAGCCAGTaGCAGCCCGAGTGCCTGTCCCCGCGCTGCACCGGCCGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: AGPCHLIQDDIPSSQ*QPECLSPRCTGRFP
Trigger: GGGAAAGCGGCCGGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACTGGCTGCTAGGGATGTCGTCCTGGATAAGGTGGCATGGACCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp AGGCTCCTGCTCCAACCCAATTCCGGGAGCCGCCGCCGCCGCCTCTaGTACTGCTGGCGAAGTGACGTGAGGGCTGACGCAGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RLLLQPNSGSRRRRL*YCWRSDVRADAEQG
Trigger: CCCCTGCTCTGCGTCAGCCCTCACGTCACTTCGCCAGCAGTAGCAGAGGCGGCGGCGGCGGCTCCCGGAATTGGGTTGGAGCAGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376208.6
ENST00000395882.6
CDS CCA 90 bp CGCTCCCGGGACTCTCTGGGGCGCAGATTCCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTCGAGGCCGGGCTCCGGCGCCTCACG +
Preference number: 5 (lower is better)
Translates to: RSRDSLGRRFLVRCE*GSGMHLEAGLRRLT
Trigger: CGTGAGGCGCCGGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 90 bp TCATGTGTGCTAGGGTGTGCGCGAACGCGTGCCCTGCGCCCGCGCTaGCCGGAGCACGATATGCATCCAGCTACGAAGAAGCCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: SCVLGCARTRALRPR*PEHDMHPATKKPGA
Trigger: CGCGCCTGGCTTCTTCGTAGCTGGATGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGCACGCGTTCGCGCACACCCTAGCACACATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp CGAGGCTTGCGCGTGTTCATGTGTGCTAGGGTGTGCGCGAACGCGTaGCCTGCGCCCGCGCTGCCCGGAGCACGATATGCATCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: RGLRVFMCARVCANA*PAPALPGARYASSY
Trigger: GTAGCTGGATGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGCACGCGTTCGCGCACACCCTAGCACACATGAACACGCGCAAGCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS GCA 90 bp CGGTATGCACCTCGAGGCTTGCGCGTGTTCATGTGTGCTAGGGTGTaGGCGAACGCGTGCCCTGCGCCCGCGCTGCCCGGAGCACGATAT +
Preference number: 5 (lower is better)
Translates to: RYAPRGLRVFMCARV*ANACPAPALPGARY
Trigger: ATATCGTGCTCCGGGCAGCGCGGGCGCAGGGCACGCGTTCGCGCACACCCTAGCACACATGAACACGCGCAAGCCTCGAGGTGCATACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS TCA 90 bp CCTCGGTGCTTGTTGCGGGCGTGCCGAGTCCAGCTTATCAGAGGCTaGGCTGGTCCGGAGCGAAGAGTGTTCCGGCAGGCGGCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: PRCLLRACRVQLIRG*AGPERRVFRQAAGF
Trigger: GAACCCTGCCGCCTGCCGGAACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCACCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp ACCATGCCCGCGGCGATCTGCTGGGCTATATGCAGCATCTGCGACTaGGTCAGTTCCGTGGGCGGGTTGCCCTCAGCCATCAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: TMPAAICWAICSICD*VSSVGGLPSAISTA
Trigger: TGCCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCAGCAGATCGCCGCGGGCATGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 90 bp CGGCGGCGCTCCCGGGACTCTCTGGGGCGCAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATGCACCTCGAGGCTTGCGCGTGTTCA +
Preference number: 5 (lower is better)
Translates to: RRRSRDSLGRRFLVR*EWGSGMHLEACACS
Trigger: TGAACACGCGCAAGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGCGCCGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS GCA 90 bp CCACGATGCCAGGAGAAGGGTCGCTGCACCAGATCCGAGAGGCACTaGATTTGCAGGACGTGGGACAGGCGAAAGCGGCCCTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PRCQEKGRCTRSERH*ICRTWDRRKRPSRS
Trigger: GCTTCTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTGGCATCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp GTGCTTGTTGCGGGCGTGCCGAGTCCAGCTTATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTTCCGGCAGGCGGCAGGGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: VLVAGVPSPAYQRLS*SGAKSVPAGGRVHS
Trigger: ACTGTGAACCCTGCCGCCTGCCGGAACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp AAGGGTCGCTGCACCAGATCCGAGAGGCACTGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCCTCCAGAAGCCCACAACCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: KGRCTRSERHCICRT*DRRKRPSRSPQPAS
Trigger: GCTGGCTGGTTGTGGGCTTCTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp CGATCTGCTGGGCTATATGCAGCATCTGCGACTGCGTCAGTTCCGTaGGCGGGTTGCCCTCAGCCATCAGCACGGCATCAGGGCCGTGTG +
Preference number: 5 (lower is better)
Translates to: RSAGLYAASATASVP*AGCPQPSARHQGRV
Trigger: CACACGGCCCTGATGCCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCAGCAGATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 90 bp TGCCAGGAGAAGGGTCGCTGCACCAGATCCGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGAAAGCGGCCCTCCAGAAGCCCACAA +
Preference number: 5 (lower is better)
Translates to: CQEKGRCTRSERHCI*RTWDRRKRPSRSPQ
Trigger: TTGTGGGCTTCTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp CGCTCCCGGGACTCTCTGGGGCGCAGATTCCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTCGAGGCTTGCGCGTGTTCATGTGTG +
Preference number: 5 (lower is better)
Translates to: RSRDSLGRRFLVRCE*GSGMHLEACACSCV
Trigger: CACACATGAACACGCGCAAGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGACTCCTCGGTGCTTGTaGCGGGCGTGCCGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRTPRCL*RACRVQ
Trigger: CTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS TCA 90 bp CCGGAGATGCCTTGGCCAAGTTCTGAAGGAGGGTATGGATGCCCTTaGTGTTCTTCCTCATGTGGGGCTCTCGCTGCCAGCACCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PEMPWPSSEGGYGCP*CSSSCGALAASTPA
Trigger: TGCTGGGGTGCTGGCAGCGAGAGCCCCACATGAGGAAGAACATCAAGGGCATCCATACCCTCCTTCAGAACTTGGCCAAGGCATCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCGTCTGAGGAGTACGTaGGGAAGGATCGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEERLRST*GRIGLG
Trigger: CCCCAGACCGATCCTTCCCAACGTACTCCTCAGACG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTCCTGTGGGACACAGTaGGCTGCGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPSCGTQ*AAAGDS
Trigger: ACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRLTPRC*LRACRV
Trigger: GACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGGGCACAGCCTCCCGTaGGCATGCTGTGCCAAATTT +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEGHSLP*ACCAKF
Trigger: AAATTTGGCACAGCATGCCAACGGGAGGCTGTGCCC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTCTCGCTGTGGGGTCTaGGACTGCTCATCATTGGCC +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEESRCGV*DCSSLA
Trigger: GGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGTGAAGGAGAGCAGCTaGGTGGCCTCCAGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPVKESS*VASSGS
Trigger: ACTGCCGCTGGAGGCCACCAAGCTGCTCTCCTTCAC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGTGAAGGAGAGCAGCTaGGTGGCCTCCAGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIVKESS*VASSGS
Trigger: ACTGCCGCTGGAGGCCACCAAGCTGCTCTCCTTCAC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAAGCTCTCAGCCTGCCTaGTCAGAACAAGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPSSQPA*SEQESL
Trigger: GAGGCTCTCTTGTTCTGACAAGGCAGGCTGAGAGCT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS GCA 90 bp GGTGATGTTCTCAGGATCTACACTGTTAGGCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGGGTCGCTGCACCAGATCCGAGAGGC +
Preference number: 5 (lower is better)
Translates to: GDVLRIYTVRLQSRK*HDARRRVAAPDPRG
Trigger: GCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAGCCTAACAGTGTAGATCCTGAGAACATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS-3UTR CAA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWLTPRC*LRACRV
Trigger: GACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAA...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPLTPRC*LRACRV
Trigger: GACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAA...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLTPRC*LRACRV
Trigger: GACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGACTCTGCAACTGTGTTaGCTCAGCTGGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRTLQLC*LSWSWS
Trigger: GGACCAGGACCAGCTGAGCAAACACAGTTGCAGAGT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAACTCCTCGGTGCTTGTaGCGGGCGTGCCGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKTPRCL*RACRVQ
Trigger: CTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGATGGCAAACCACAATaGGGTATCTGCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPDGKPQ*GICRFA
Trigger: GGCAAACCTGCAGATACCCAATTGTGGTTTGCCATC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGGGCACAGCCTCCCGTaGGCATGCTGTGCCAAATTT +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTGHSLP*ACCAKF
Trigger: AAATTTGGCACAGCATGCCAACGGGAGGCTGTGCCC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTATTATCAGGCGGTCTaGGGGGAACCTCTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLYYQAV*GEPLGH
Trigger: ATGGCCCAGAGGTTCCCCCAAGACCGCCTGATAATA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAAGACCAACTCCAGACTaGATGTTGCTGAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPRPTPD*MLLSSS
Trigger: TGAGGAGCTCAGCAACATCAAGTCTGGAGTTGGTCT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGCCAGCAGGGTTTCCTaGAGGAACATCTATCCATAC +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPASRVS*RNIYPY
Trigger: GTATGGATAGATGTTCCTCAAGGAAACCCTGCTGGC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATCGGACCTCCCCACATaGGGGGCCAGCTGCCCTTAC +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKSDLPT*GASCPY
Trigger: GTAAGGGCAGCTGGCCCCCAATGTGGGGAGGTCCGA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTCCTGTGGGACACAGTaGGCTGCGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLSCGTQ*AAAGDS
Trigger: ACTGTCCCCAGCCGCAGCCAACTGTGTCCCACAGGA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLWGADS*LDANGG
Trigger: ACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCTGGGTATCTGCAGGTTaGCCAGGGGAATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPWVSAG*PGEYSC
Trigger: GCAAGAATATTCCCCTGGCAAACCTGCAGATACCCA...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCGATGGCAAACCACAATaGGGTATCTGCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPDGKPQ*GICRFA
Trigger: GGCAAACCTGCAGATACCCAATTGTGGTTTGCCATC...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCAGCGCTGGTTTGGGGTaGCCTTTCACAGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLSAGLG*PFTVNG
Trigger: TCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCT...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTTGGACTGCTCATCATaGGCCTTCAAGCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPLDCSS*AFKPLG
Trigger: GCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCTCGCTGTGGGGTCTaGGACTGCTCATCATTGGCC +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSRCGV*DCSSLA
Trigger: GGCCAATGATGAGCAGTCCAAGACCCCACAGCGAGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCACTCCAGACTTGATGTaGCTGAGCTCCTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPTPDLM*LSSSAP
Trigger: TGGAGCTGAGGAGCTCAGCAACATCAAGTCTGGAGT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGACTCCAGACTTGATGTaGCTGAGCTCCTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLTPDLM*LSSSAP
Trigger: TGGAGCTGAGGAGCTCAGCAACATCAAGTCTGGAGT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGAGAACTCCATCTTGGTaGGCCGATGATGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRRTPSW*ADDEGV
Trigger: TACTCCCTCATCATCGGCCAACCAAGATGGAGTTCT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGACAGCCAAGGTATCCTaGATGGAAGTGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRTAKVS*MEVKAS
Trigger: GGATGCCTTCACTTCCATCAAGGATACCTTGGCTGT...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTATTCTGCCTGCTACTaGGCCACTGTCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGYSACY*ATVSLP
Trigger: GGGGAGGGAGACAGTGGCCAAGTAGCAGGCAGAATA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTGCTTGGTTCAGCTCTaGCGCGTGTTCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPCLVQL*RVFMCA
Trigger: AGCACACATGAACACGCGCAAGAGCTGAACCAAGCA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CAA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCCTTCTGCGACAGTCATaGTCATGGAACTTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTLLRQS*SWNFPG
Trigger: CCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAG...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS TCA 90 bp GAGGGTCGGGTGACAAACCGTAACTATTCTGCGGGTGCAGTTAAATaGTGGCTGCGGGGCATTTGCAAGCCTTGTCTGAGAATCCGTCTT +
Preference number: 5 (lower is better)
Translates to: EGRVTNRNYSAGAVK*WLRGICKPCLRIRL
Trigger: AAGACGGATTCTCAGACAAGGCTTGCAAATGCCCCGCAGCCATCATTTAACTGCACCCGCAGAATAGTTACGGTTTGTCACCCGACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGWGADS*LDANGG
Trigger: ACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLWGADS*LDANGG
Trigger: ACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAACTCCTCGGTGCTTGTaGCGGGCGTGCCGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSTPRCL*RACRVQ
Trigger: CTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGT...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGCCAGGGGAATATTCTaGCTGCTTTCATTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLARGIF*LLSFRQ
Trigger: CTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTGGGTATCTGCAGGTTaGCCAGGGGAATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLWVSAG*PGEYSC
Trigger: GCAAGAATATTCCCCTGGCAAACCTGCAGATACCCA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGGATGGCAAACCACAATaGGGTATCTGCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLDGKPQ*GICRFA
Trigger: GGCAAACCTGCAGATACCCAATTGTGGTTTGCCATC...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAAGCCCTGTGTGTGGCTaGTTTCATTCATATGTTTGG +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPSPVCG*FHSYVW
Trigger: CCAAACATATGAATGAAACAAGCCACACACAGGGCT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGAGCGCTGGTTTGGGGTaGCCTTTCACAGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLSAGLG*PFTVNG
Trigger: TCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAGCGCTGGTTTGGGGTaGCCTTTCACAGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSAGLG*PFTVNG
Trigger: TCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGCAGGATAATTTGGGTTaGCACCATCGTCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEQDNLG*HHRQFQ
Trigger: CTGGAATTGACGATGGTGCAAACCCAAATTATCCTG...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGCAGAGTCATCATCATaGCTGATAACGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIAESSS*LITEAG
Trigger: CCCAGCCTCCGTTATCAGCAATGATGATGACTCTGC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGCAGAGTCATCATCATaGCTGATAACGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPAESSS*LITEAG
Trigger: CCCAGCCTCCGTTATCAGCAATGATGATGACTCTGC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAAGTCCTTGCGTGCATaGTCACTGGCATCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPKSLRA*SLASFR
Trigger: CCTGAAGGATGCCAGTGACAATGCACGCAAGGACTT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAAGTCCTTGCGTGCATaGTCACTGGCATCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIKSLRA*SLASFR
Trigger: CCTGAAGGATGCCAGTGACAATGCACGCAAGGACTT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCACACTATGCGCCATCTaGTGTCTCACGGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAITLCAI*CLTEAI
Trigger: GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGTGTCAACTCCCTCGCTaGACTGCAGTTGCTACTGGA +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLCQLPR*TAVATG
Trigger: TCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGACA...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGCCAGCAGGGTTTCCTaGAGGAACATCTATCCATAC +
Preference number: 5 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLASRVS*RNIYPY
Trigger: GTATGGATAGATGTTCCTCAAGGAAACCCTGCTGGC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGGCTGGGACGTTCTTTaGTCTCTGAAGACCAAAACT +
Preference number: 5 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTGWDVL*SLKTKT
Trigger: AGTTTTGGTCTTCAGAGACAAAAGAACGTCCCAGCC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTATGCACCTCGAGGCTaGCGCGTGTTCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTYAPRG*RVFMCA
Trigger: AGCACACATGAACACGCGCAAGCCTCGAGGTGCATA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS TCA 90 bp CCACCACAGCATAGACCGAGAGATGTTCCCGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTTCATTACTTCTGTTCGTGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: PPQHRPRDVPDRFYQ*RLWKGFHYFCSWCP
Trigger: GGGACACCACGAACAGAAGTAATGAAATCCCTTCCACAGACGTCACTGATAAAACCGGTCGGGAACATCTCTCGGTCTATGCTGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp GGTCATTCCAATAATGACAGCATCTGGGCCACCTTCCGAAGAAGATaGAGTGTTACTCCCATTGGAGATGTGATGGAGTGGGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: GHSNNDSIWATFRRR*SVTPIGDVMEWAGR
Trigger: TCTGCCAGCCCACTCCATCACATCTCCAATGGGAGTAACACTCCATCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATTGGAATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWWGADS*LDANGG
Trigger: ACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGACTCCTCGGTGCTTGTaGCGGGCGTGCCGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLTPRCL*RACRVQ
Trigger: CTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAATCCAGAATCCACAATaGTCAGATTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPIQNPQ*SDFSVP
Trigger: TGGGACTGAGAAATCTGACAATTGTGGATTCTGGAT...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGCCAGGGGAATATTCTaGCTGCTTTCATTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPARGIF*LLSFRQ
Trigger: CTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTGGGTATCTGCAGGTTaGCCAGGGGAATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTWVSAG*PGEYSC
Trigger: GCAAGAATATTCCCCTGGCAAACCTGCAGATACCCA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGATGGCAAACCACAATaGGGTATCTGCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPDGKPQ*GICRFA
Trigger: GGCAAACCTGCAGATACCCAATTGTGGTTTGCCATC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAAGCGCTGGTTTGGGGTaGCCTTTCACAGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLSAGLG*PFTVNG
Trigger: TCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTCACGGTGGAAGTCCTaGCGTGCATTGTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRSRWKS*RALSLA
Trigger: TGCCAGTGACAATGCACGCAAGGACTTCCACCGTGA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTAGGGTATGGATGCCCTaGATGTTCTTCCTCATGTGG +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPRVWMP*MFFLMW
Trigger: CCACATGAGGAAGAACATCAAGGGCATCCATACCCT...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTCCCAGTGGTTGTCTTaGTTCCTCCCATATTGCGGT +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISQWLS*FLPYCG
Trigger: ACCGCAATATGGGAGGAACAAAGACAACCACTGGGA...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGCTTGCTCCAGTACATaGAACGTTCAGCTAACCTCC +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLACSST*NVQLTS
Trigger: GGAGGTTAGCTGAACGTTCAATGTACTGGAGCAAGC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGCTTGCTCCAGTACATaGAACGTTCAGCTAACCTCC +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPACSST*NVQLTS
Trigger: GGAGGTTAGCTGAACGTTCAATGTACTGGAGCAAGC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGTATTCAGGTGTCACTTaGAAATCAGCCAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEYSGVT*KSAKMQ
Trigger: CTGCATCTTGGCTGATTTCAAAGTGACACCTGAATA...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTATTATCAGGCGGTCTaGGGGGAACCTCTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWYYQAV*GEPLGH
Trigger: ATGGCCCAGAGGTTCCCCCAAGACCGCCTGATAATA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCACAAGAGAACCCAAGATaGATGATTTGGGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPQENPR*MIWGFC
Trigger: GCAAAATCCCCAAATCATCAATCTTGGGTTCTCTTG...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGCAGCCTTTCCCCTTATaGGTAAGACAAGGACGAAGT +
Preference number: 5 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLQPFPL*VRQGRS
Trigger: ACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTG...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGAGCTATCAGAGGTCCTaGCACAGCCAAGGTATCCTT +
Preference number: 5 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWSYQRS*HSQGIL
Trigger: AAGGATACCTTGGCTGTGCAAGGACCTCTGATAGCT...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGCAAAAGTAAACTCTTaGGGTGTTGCAGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWAKVNS*GVAGKG
Trigger: CCCCTTCCCTGCAACACCCAAAGAGTTTACTTTTGC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGCCTTTCATGCCAAACTaGGAGTGTCTTGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRPFMPN*ECLANL
Trigger: TAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGG...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGATGGCTGCGGGGCATTaGCAAGCCTTGTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGMAAGH*QALSEN
Trigger: ATTCTCAGACAAGGCTTGCAAATGCCCCGCAGCCAT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTATGGCTGCGGGGCATTaGCAAGCCTTGTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTMAAGH*QALSEN
Trigger: ATTCTCAGACAAGGCTTGCAAATGCCCCGCAGCCAT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAATGGCTGCGGGGCATTaGCAAGCCTTGTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLMAAGH*QALSEN
Trigger: ATTCTCAGACAAGGCTTGCAAATGCCCCGCAGCCAT...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATGCTTGGTTCAGCTCTaGCGCGTGTTCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLCLVQL*RVFMCA
Trigger: AGCACACATGAACACGCGCAAGAGCTGAACCAAGCA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCAGAGTTACCTCTGCATaGGTGTTCCCCAATCACAGC +
Preference number: 5 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPRVTSA*VFPNHS
Trigger: GCTGTGATTGGGGAACACCAATGCAGAGGTAACTCT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTATGGGTGGGGCTGGGATaGTTTAGTTCTTGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLWVGLG*FSSCPC
Trigger: GCAAGGACAAGAACTAAACAATCCCAGCCCCACCCA...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS TCA 90 bp CGTTATAGAACCACTGAAGCGCTGGTTTGGGGTTGCCTTTCACAGTaGATGGAATGCACCAGTGGTGGTCTGAGGTTGGAGATTCGAGAA +
Preference number: 5 (lower is better)
Translates to: RYRTTEALVWGCLSQ*MECTSGGLRLEIRE
Trigger: TTCTCGAATCTCCAACCTCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTCTATAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 90 bp CACCACAGTCTCTTCTACAATCGCGGTAGAGGCTGTCTCCCTTTTTaGAATGGAAACCGTGCTTGGTTCAGCTCTTGCGCGTGTTCATGT +
Preference number: 5 (lower is better)
Translates to: HHSLFYNRGRGCLPF*NGNRAWFSSCACSC
Trigger: ACATGAACACGCGCAAGAGCTGAACCAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCCTCTACCGCGATTGTAGAAGAGACTGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359847.4
ENST00000376208.6
ENST00000395882.6
CDS CCA 90 bp AGCGCTGGTTTGGGGTTGCCTTTCACAGTGAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGATTCGAGAAATGTGATAGTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: SAGLGLPFTVNGMHQ*WSEVGDSRNVIVGA
Trigger: TGCACCAACTATCACATTTCTCGAATCTCCAACCTCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp ACTCATTCTTGGCTATTAGAGTGTAGTCCCCATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGCAGCCGTGGTACTCCGTGTGATTGG +
Preference number: 5 (lower is better)
Translates to: THSWLLECSPHCSCE*DYPAGGSRGTPCDW
Trigger: CCAATCACACGGAGTACCACGGCTGCCTCCAGCTGGATAATCCCACTCACATGAACAATGGGGACTACACTCTAATAGCCAAGAATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCACTCCTCGGTGCTTGTaGCGGGCGTGCCGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPTPRCL*RACRVQ
Trigger: CTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLTPRC*LRACRV
Trigger: GACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCATCCAGAATCCACAATaGTCAGATTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPIQNPQ*SDFSVP
Trigger: TGGGACTGAGAAATCTGACAATTGTGGATTCTGGAT...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGACAAACTCGTCAGTTaGTTTCGGGTAAAATTGATG +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPDKLVS*FRVKLM
Trigger: CATCAATTTTACCCGAAACAAACTGACGAGTTTGTC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGAGCATGTAAATGGATaGCCCACCAGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPEHVNG*PTRISS
Trigger: TGAACTGATCCTGGTGGGCAATCCATTTACATGCTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCACTGGATTTAGCCTCTaGGAGAGTCTTGATCCACAT +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPTGFSL*ESLDPH
Trigger: ATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTGGGTATCTGCAGGTTaGCCAGGGGAATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGWVSAG*PGEYSC
Trigger: GCAAGAATATTCCCCTGGCAAACCTGCAGATACCCA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATT +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEEVDRI*IFSYKI
Trigger: AATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCTGGACTCATTCAATATaGCCCCGTTATAGAACCACT +
Preference number: 5 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTWTHSI*PRYRTT
Trigger: AGTGGTTCTATAACGGGGCAATATTGAATGAGTCCA...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTGGACTCATTCAATATaGCCCCGTTATAGAACCACT +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRWTHSI*PRYRTT
Trigger: AGTGGTTCTATAACGGGGCAATATTGAATGAGTCCA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCCAGGATAATTTGGGTTaGCACCATCGTCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPQDNLG*HHRQFQ
Trigger: CTGGAATTGACGATGGTGCAAACCCAAATTATCCTG...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCCAGGATAATTTGGGTTaGCACCATCGTCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLQDNLG*HHRQFQ
Trigger: CTGGAATTGACGATGGTGCAAACCCAAATTATCCTG...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGGCAGAGTCATCATCATaGCTGATAACGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWAESSS*LITEAG
Trigger: CCCAGCCTCCGTTATCAGCAATGATGATGACTCTGC...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAGGGTATGGATGCCCTaGATGTTCTTCCTCATGTGG +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTRVWMP*MFFLMW
Trigger: CCACATGAGGAAGAACATCAAGGGCATCCATACCCT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGGTAGTTTTCACAAATTaGATGGAAGGCCGTATTTGG +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEEVVFTN*MEGRIW
Trigger: CCAAATACGGCCTTCCATCAAATTTGTGAAAACTAC...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTGGCCTCCAGCGGCAGTTAAAAGATGTTCATCCTCTCAGCCCGTCTGAGGAGAATACCAGGTCACGATaGAAGGGGAAATATATCTGT +
Preference number: 5 (lower is better)
Translates to: GGLQRQLKDVHPLSPSEENTRSR*KGKYIC
Trigger: ACAGATATATTTCCCCTTCAATCGTGACCTGGTATT...CTCCTCAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCACTTTCCATGTCAGGTaGAGAGAAGCTGGTCACATG +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAITFHVR*REAGHM
Trigger: CATGTGACCAGCTTCTCTCAACCTGACATGGAAAGT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGACTTTCCATGTCAGGTaGAGAGAAGCTGGTCACATG +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTTFHVR*REAGHM
Trigger: CATGTGACCAGCTTCTCTCAACCTGACATGGAAAGT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGTTGTCTGGCCAGAATTaGCAGATAACCATAGAACTC +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQRLSGQN*QITIEL
Trigger: GAGTTCTATGGTTATCTGCAAATTCTGGCCAGACAA...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCAAGGCAACTTCTTGCTaGGCTAGGTTATGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPKATSC*ARLWKL
Trigger: TAGCTTCCATAACCTAGCCAAGCAAGAAGTTGCCTT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCAGCCTTTCCCCTTATaGGTAAGACAAGGACGAAGT +
Preference number: 5 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWQPFPL*VRQGRS
Trigger: ACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTG...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTCTCAGTCTCAGAGGGAAGCGCTAAAGCAATaGTTTCTACCCGTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: QRAEWIHLLLGLLSQSQREALKQ*FLPVFQ
Trigger: CTGAAAAACGGGTAGAAACAATTGCTTTAGCGCTTC...CCTCTGAGACTGAGAGAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCAGCAATGTGCCATGAAGGCTCCCACGAGATGAGTCGTCAACCCAGTGTGCCAGTGCTTGAAACTGGTTaGCTAACAAATCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: AAMCHEGSHEMSRQPSVPVLETG*LTNLHL
Trigger: GAGATGAAGATTTGTTAGCAAACCAGTTTCAAGCAC...TGGCACACTGGGTTGACGACTCATCTCGTGGGAGCCTTCATGGCACATTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGACAGCCAAGGTATCCTaGATGGAAGTGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGTAKVS*MEVKAS
Trigger: GGATGCCTTCACTTCCATCAAGGATACCTTGGCTGT...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTTGCTTGGTTCAGCTCTaGCGCGTGTTCATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLCLVQL*RVFMCA
Trigger: AGCACACATGAACACGCGCAAGAGCTGAACCAAGCA...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTAAATGGAAACCGTGCTaGGTTCAGCTCTTGCGCGTG +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLKWKPC*VQLLRV
Trigger: CACGCGCAAGAGCTGAACCAAGCACGGTTTCCATTT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCAGGCTGTCTCCCTTTTaGAAATGGAAACCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPRLSPF*KWKPCL
Trigger: CAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCCT...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGAGAGTTACCTCTGCATaGGTGTTCCCCAATCACAGC +
Preference number: 5 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVRVTSA*VFPNHS
Trigger: GCTGTGATTGGGGAACACCAATGCAGAGGTAACTCT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GTTCTGTGTTGCTGGGTGGGGCTGGGATTGTTTAGTTCTTGTCCTTGCTACCTAGAGACCTGCCTGGCATaGAAGTGCCAGAACCTTTAT +
Preference number: 5 (lower is better)
Translates to: VLCCWVGLGLFSSCPCYLETCLA*KCQNLY
Trigger: ATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTC...TAGGTAGCAAGGACAAGAACTAAACAATCCCAGCCCCACCCAGCAACACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGAGACCTGCCTGGCATaGAAGTGCCAGAACCTTTAT +
Preference number: 5 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVETCLA*KCQNLY
Trigger: ATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATACTCCTCGGTGCTTGTaGCGGGCGTGCCGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYTPRCL*RACRVQ
Trigger: CTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCATCCAGAATCCACAATaGTCAGATTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPIQNPQ*SDFSVP
Trigger: TGGGACTGAGAAATCTGACAATTGTGGATTCTGGAT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTTGTTTCGGGTAAAATaGATGTGCTGCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTLFRVK*MCCRLL
Trigger: CAGCAACCTGCAGCACATCAATTTTACCCGAAACAA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCTTGTTTCGGGTAAAATaGATGTGCTGCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPLFRVK*MCCRLL
Trigger: CAGCAACCTGCAGCACATCAATTTTACCCGAAACAA...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCGACAAACTCGTCAGTTaGTTTCGGGTAAAATTGATG +
Preference number: 5 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPDKLVS*FRVKLM
Trigger: CATCAATTTTACCCGAAACAAACTGACGAGTTTGTC...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGAGCATGTAAATGGATaGCCCACCAGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTEHVNG*PTRISS
Trigger: TGAACTGATCCTGGTGGGCAATCCATTTACATGCTC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGCCTCTTGGAGAGTCTaGATCCACATAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGASWRV*IHIMSQ
Trigger: CTGTGACATTATGTGGATCAAGACTCTCCAAGAGGC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCACTGGATTTAGCCTCTaGGAGAGTCTTGATCCACAT +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAITGFSL*ESLDPH
Trigger: ATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGACTGGATTTAGCCTCTaGGAGAGTCTTGATCCACAT +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTTGFSL*ESLDPH
Trigger: ATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTGGGTATCTGCAGGTTaGCCAGGGGAATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRWVSAG*PGEYSC
Trigger: GCAAGAATATTCCCCTGGCAAACCTGCAGATACCCA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGATGGCAAACCACAATaGGGTATCTGCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLDGKPQ*GICRFA
Trigger: GGCAAACCTGCAGATACCCAATTGTGGTTTGCCATC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCAGCCCTGTGTGTGGCTaGTTTCATTCATATGTTTGG +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAISPVCG*FHSYVW
Trigger: CCAAACATATGAATGAAACAAGCCACACACAGGGCT...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGAGCCCTGTGTGTGGCTaGTTTCATTCATATGTTTGG +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLSPVCG*FHSYVW
Trigger: CCAAACATATGAATGAAACAAGCCACACACAGGGCT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGCAGGATAATTTGGGTTaGCACCATCGTCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTQDNLG*HHRQFQ
Trigger: CTGGAATTGACGATGGTGCAAACCCAAATTATCCTG...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCAGGATAATTTGGGTTaGCACCATCGTCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPQDNLG*HHRQFQ
Trigger: CTGGAATTGACGATGGTGCAAACCCAAATTATCCTG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGTCTTTCATGCCAAACTaGGAGTGTCTTGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLSFMPN*ECLANL
Trigger: TAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGA...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304053.10
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTCACTCTATCACCTCATaGTTTGACAGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTHSITS*FDSWYQ
Trigger: CTGGTACCAGCTGTCAAACAATGAGGTGATAGAGTG...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGTGAAGGAGAGCAGCTaGGTGGCCTCCAGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPVKESS*VASSGS
Trigger: ACTGCCGCTGGAGGCCACCAAGCTGCTCTCCTTCAC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTCACGGAAGCCATCTTaGCTCTCTACTGCACGCTAT +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRSRKPS*LSTARY
Trigger: ATAGCGTGCAGTAGAGAGCAAAGATGGCTTCCGTGA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTTGTCTGGCCAGAATTaGCAGATAACCATAGAACTC +
Preference number: 5 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLLSGQN*QITIEL
Trigger: GAGTTCTATGGTTATCTGCAAATTCTGGCCAGACAA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGAAGCGCTAAAGCAATaGTTTCTACCCGTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPEALKQ*FLPVFQ
Trigger: CTGAAAAACGGGTAGAAACAATTGCTTTAGCGCTTC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAATTGATAGAGGCCTCCTaGCCAGAACCCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: HDERSGDHWTANSIKFKQLIEAS*PEPQSR
Trigger: CCTAGACTGGGGTTCTGGCAAGGAGGCCTCTATCAA...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCTATCTAATGAGGAGCTaGGGTTCCACTTTAATGCAC +
Preference number: 5 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLYLMRS*GSTLMH
Trigger: GTGCATTAAAGTGGAACCCAAGCTCCTCATTAGATA...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAATATTCTGCCTGCTACTaGGCCACTGTCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKYSACY*ATVSLP
Trigger: GGGGAGGGAGACAGTGGCCAAGTAGCAGGCAGAATA...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGCCTTTCATGCCAAACTaGGAGTGTCTTGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLPFMPN*ECLANL
Trigger: TAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGG...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCCCTTTCATGCCAAACTaGGAGTGTCTTGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPPFMPN*ECLANL
Trigger: TAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGG...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATGGGTGGGGCTGGGATaGTTTAGTTCTTGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKWVGLG*FSSCPC
Trigger: GCAAGGACAAGAACTAAACAATCCCAGCCCCACCCA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGCTAGATGGAATTGCTaGTCCTCAGTCCAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKARWNC*SSVQLS
Trigger: GGACAGCTGGACTGAGGACAAGCAATTCCATCTAGC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGCTTCTGCGACAGTCATaGTCATGGAACTTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKLLRQS*SWNFPG
Trigger: CCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAG...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGTGAAACTCAAGGATTaGCGTTTCTTAGGAATCTCT +
Preference number: 5 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTVKLKD*RFLGIS
Trigger: AGAGATTCCTAAGAAACGCAAATCCTTGAGTTTCAC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS GCA 90 bp GCAAACCACAATTGGGTATCTGCAGGTTTGCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGTACAAATCCTGAGTGTCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: ANHNWVSAGLPGEYS*CFHSGSTNPECLDW
Trigger: CCAGTCCAGACACTCAGGATTTGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATTGTGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp GCTGATAACGGAGGCTGGGCCTTTCATGCCAAACTTGGAGTGTCTTaGCAACTTAAGCAGAAACAGCATTACCAAAAGGCAAAATCCCAC +
Preference number: 5 (lower is better)
Translates to: ADNGGWAFHAKLGVS*QLKQKQHYQKAKSH
Trigger: GTGGGATTTTGCCTTTTGGTAATGCTGTTTCTGCTTAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGGCCCAGCCTCCGTTATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323115.10
ENST00000376208.6
ENST00000376213.6
CDS CCA 90 bp GCTGGTTTGGGGTTGCCTTTCACAGTGAATGGAATGCACCAGTGGTaGTCTGAGGTTGGAGATTCGAGAAATGTGATAGTTGGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: AGLGLPFTVNGMHQW*SEVGDSRNVIVGAK
Trigger: TTTTGCACCAACTATCACATTTCTCGAATCTCCAACCTCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp TTTGGACTCATTCAATATTGCCCCGTTATAGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCACAGTGAATGGAATGCACCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: FGLIQYCPVIEPLKR*FGVAFHSEWNAPVV
Trigger: CACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTCTATAACGGGGCAATATTGAATGAGTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS-3UTR CAA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGLTPRC*LRACRV
Trigger: GACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAA...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTTGTTTCGGGTAAAATaGATGTGCTGCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGLFRVK*MCCRLL
Trigger: CAGCAACCTGCAGCACATCAATTTTACCCGAAACAA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCGACAAACTCGTCAGTTaGTTTCGGGTAAAATTGATG +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPDKLVS*FRVKLM
Trigger: CATCAATTTTACCCGAAACAAACTGACGAGTTTGTC...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGAGCATGTAAATGGATaGCCCACCAGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLEHVNG*PTRISS
Trigger: TGAACTGATCCTGGTGGGCAATCCATTTACATGCTC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGCCAGGGGAATATTCTaGCTGCTTTCATTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKARGIF*LLSFRQ
Trigger: CTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAGCCCTGTGTGTGGCTaGTTTCATTCATATGTTTGG +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSPVCG*FHSYVW
Trigger: CCAAACATATGAATGAAACAAGCCACACACAGGGCT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTGGACTCATTCAATATaGCCCCGTTATAGAACCACT +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPWTHSI*PRYRTT
Trigger: AGTGGTTCTATAACGGGGCAATATTGAATGAGTCCA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTCTTTCATGCCAAACTaGGAGTGTCTTGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSFMPN*ECLANL
Trigger: TAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277120.8
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTCACGGTGGAAGTCCTaGCGTGCATTGTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSRWKS*RALSLA
Trigger: TGCCAGTGACAATGCACGCAAGGACTTCCACCGTGA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGAATACAACAAGGCATaGTTAGTTGTGGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPEYNKA*LVVVGK
Trigger: TTTGCCCACCACAACTAACAATGCCTTGTTGTATTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAAGACCTTTAGGGACTaGTCAGAAGGTATAAGTGGA +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTKTFRD*SEGISG
Trigger: TCCACTTATACCTTCTGACAAGTCCCTAAAGGTCTT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTTGGACTGCTCATCATaGGCCTTCAAGCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHLDCSS*AFKPLG
Trigger: GCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTCAAGAACCTTTGACTaGAGCAGCAGTGATTCATTC +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSRTFD*SSSDSF
Trigger: GAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTGA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTGGCAAAATAGTTGCTaGGTGGTGGTTGTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTWQNSC*VVVVVK
Trigger: TTTCACAACAACCACCACCAAGCAACTATTTTGCCA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTGGCAAAATAGTTGCTaGGTGGTGGTTGTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPWQNSC*VVVVVK
Trigger: TTTCACAACAACCACCACCAAGCAACTATTTTGCCA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGGGGAAGGAATTGTATaGGGACCTGCAGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: HDERSGDHWTANSIKFKQGEGIV*GPAEQQ
Trigger: CTGCTGTTCTGCAGGTCCCAATACAATTCCTTCCCC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAGCTCTCAGCCTGCCTaGTCAGAACAAGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMSSQPA*SEQESL
Trigger: GAGGCTCTCTTGTTCTGACAAGGCAGGCTGAGAGCT...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGCTGTTGAGCAATAAACTGCATTaGGAGTTATCTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: LQPFPLLVRQGRSGLWLLSNKLH*ELSGVM
Trigger: CATCACTCCAGATAACTCCAAATGCAGTTTATTGCT...CAACAGCCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGTTAGGTCCGCTCCCTaGCATGAAATGTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKVRSAP*HEMWER
Trigger: CCTCTCCCACATTTCATGCAAGGGAGCGGACCTAAC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCACAGTCTTGTCTTTATaGGTATATGCGTTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPTVLSL*VYAFGS
Trigger: AGAGCCAAACGCATATACCAATAAAGACAAGACTGT...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTAATAGGAGGAAGGATTaGCTAGGATGTCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLNRRKD*LGCLWP
Trigger: TGGCCAGAGACATCCTAGCAAATCCTTCCTCCTATT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GGAGACCTGCCTGGCATTGAAGTGCCAGAACCTTTATTGGAGAGTGACAGGCCCGTCTTGTGTAGTATCTaGATTCCATTTTGCAATGGA +
Preference number: 5 (lower is better)
Translates to: GDLPGIEVPEPLLESDRPVLCSI*IPFCNG
Trigger: TCCATTGCAAAATGGAATCAAGATACTACACAAGAC...GGGCCTGTCACTCTCCAATAAAGGTTCTGGCACTTCAATGCCAGGCAGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CCTGCCACCTCTTTGCTGCTGGGGTCAGGACAAGCTTTCCTACCCATGAAAACCGTCTTGTGTAGTATCTaGATTCCATTTTGCAATGGA +
Preference number: 5 (lower is better)
Translates to: PATSLLLGSGQAFLPMKTVLCSI*IPFCNG
Trigger: TCCATTGCAAAATGGAATCAAGATACTACACAAGAC...GGTTTTCATGGGTAGGAAAGCTTGTCCTGACCCCAGCAGCAAAGAGGTGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TTTCTTGAGGTGCTGCTTAGCTGCCTGAGAGTTACCTCTGCATTGGTGTTCCCCTCTGTACTAATTTCCTaGGAGTCAAGTCAGCTAAGC +
Preference number: 5 (lower is better)
Translates to: FLEVLLSCLRVTSALVFPSVLIS*ESSQLS
Trigger: GCTTAGCTGACTTGACTCCAAGGAAATTAGTACAGA...GGGGAACACCAATGCAGAGGTAACTCTCAGGCAGCTAAGCAGCACCTCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS TCA 90 bp TTTGGGGTTGCCTTTCACAGTGAATGGAATGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAATGTGATAGTTGGTGCAAAATGCAC +
Preference number: 5 (lower is better)
Translates to: FGVAFHSEWNAPVVV*GWRFEKCDSWCKMH
Trigger: GTGCATTTTGCACCAACTATCACATTTCTCGAATCTCCAACCTCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp GGCCAGATTTGCAGATGGCAAACCACAATTGGGTATCTGCAGGTTTaGCAGGGGAATATTCTTGCTGCTTTCATTCAGGCAGTACAAATC +
Preference number: 5 (lower is better)
Translates to: GQICRWQTTIGYLQV*QGNILAAFIQAVQI
Trigger: GATTTGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp AACTCTTCTCCTCCATCAGGCATGGATTTAGCCTCCTTTAGTTCCTaGAGTGACACAGGAGCCTCCAAATACCAAATTATTATCAGGCGG +
Preference number: 5 (lower is better)
Translates to: NSSPPSGMDLASFSS*SDTGASKYQIIIRR
Trigger: CCGCCTGATAATAATTTGGTATTTGGAGGCTCCTGTGTCACTGCAGGAACTAAAGGAGGCTAAATCCATGCCTGATGGAGGAGAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIWGADS*LDANGG
Trigger: ACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYLTPRC*LRACRV
Trigger: GACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGATCCAGAATCCACAATaGTCAGATTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVIQNPQ*SDFSVP
Trigger: TGGGACTGAGAAATCTGACAATTGTGGATTCTGGAT...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTTGTTTCGGGTAAAATaGATGTGCTGCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWLFRVK*MCCRLL
Trigger: CAGCAACCTGCAGCACATCAATTTTACCCGAAACAA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGACAAACTCGTCAGTTaGTTTCGGGTAAAATTGATG +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPDKLVS*FRVKLM
Trigger: CATCAATTTTACCCGAAACAAACTGACGAGTTTGTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGCCTCTTGGAGAGTCTaGATCCACATAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKASWRV*IHIMSQ
Trigger: CTGTGACATTATGTGGATCAAGACTCTCCAAGAGGC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TATCACCTCCAGCCTTTCCCCTTATTGGTAAGACAAGGACGAAGTGGGCTGTGGGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATT +
Preference number: 5 (lower is better)
Translates to: YHLQPFPLLVRQGRSGLWEVDRI*IFSYKI
Trigger: AATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTC...CCACAGCCCACTTCGTCCTTGTCTTACCAATAAGGGGAAAGGCTGGAGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAGCGCTGGTTTGGGGTaGCCTTTCACAGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKSAGLG*PFTVNG
Trigger: TCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGCAGAGTCATCATCATaGCTGATAACGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGAESSS*LITEAG
Trigger: CCCAGCCTCCGTTATCAGCAATGATGATGACTCTGC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTCAATGACAGGGATCTaGGTCATTCCAATAATGACA +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSMTGI*VIPIMT
Trigger: TGTCATTATTGGAATGACCAAGATCCCTGTCATTGA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATAAGTCCTTGCGTGCATaGTCACTGGCATCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHKSLRA*SLASFR
Trigger: CCTGAAGGATGCCAGTGACAATGCACGCAAGGACTT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGAGACCATGCACAATTTaGCTTGCACAGTTAAAAGGA +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTRPCTI*LAQLKG
Trigger: TCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGCGTGACAAACCTGTGTaGGTTTTTGCTGATGGAATC +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRRDKPV*VFADGI
Trigger: GATTCCATCAGCAAAAACCAACACAGGTTTGTCACG...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAAGACCTTTAGGGACTaGTCAGAAGGTATAAGTGGA +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTKTFRD*SEGISG
Trigger: TCCACTTATACCTTCTGACAAGTCCCTAAAGGTCTT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATTGGACTGCTCATCATaGGCCTTCAAGCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWILDCSS*AFKPLG
Trigger: GCCCAGTGGCTTGAAGGCCAATGATGAGCAGTCCAA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTCAAGAACCTTTGACTaGAGCAGCAGTGATTCATTC +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTSRTFD*SSSDSF
Trigger: GAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTGA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTTATTCAGGTGTCACTTaGAAATCAGCCAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTYSGVT*KSAKMQ
Trigger: CTGCATCTTGGCTGATTTCAAAGTGACACCTGAATA...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GCCCTCACACCAAAGTTCTTCCTCATACTGAGACAAGTGGAGGCACAAAGGCCCTTTGTTTCTGTTTGTTaGTTTCAGCTCAGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: ALTPKFFLILRQVEAQRPFVSVC*FQLRRC
Trigger: ACACCTTCTGAGCTGAAACAAACAAACAGAAACAAA...GGGCCTTTGTGCCTCCACTTGTCTCAGTATGAGGAAGAACTTTGGTGTGAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGGGGAAGGAATTGTATaGGGACCTGCAGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSGEGIV*GPAEQQ
Trigger: CTGCTGTTCTGCAGGTCCCAATACAATTCCTTCCCC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGAGAGGGGGAAGGAATaGTATTGGGACCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSERGKE*YWDLQN
Trigger: GTTCTGCAGGTCCCAATACAATTCCTTCCCCCTCTC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGTATCTAATGAGGAGCTaGGGTTCCACTTTAATGCAC +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGYLMRS*GSTLMH
Trigger: GTGCATTAAAGTGGAACCCAAGCTCCTCATTAGATA...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GGAAGCAAACCCAAACAAAGGGCAGAATGGATTCATCTCCTCCTCGGGCTGCTCGTAAAAAGAGGAATTTaGCCATCAACCCAGAACAAA +
Preference number: 5 (lower is better)
Translates to: GSKPKQRAEWIHLLLGLLVKRGI*PSTQNK
Trigger: TTTGTTCTGGGTTGATGGCAAAATTCCTCTTTTTAC...GAGCAGCCCGAGGAGGAGATGAATCCATTCTGCCCTTTGTTTGGGTTTGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGTTAGGTCCGCTCCCTaGCATGAAATGTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNVRSAP*HEMWER
Trigger: CCTCTCCCACATTTCATGCAAGGGAGCGGACCTAAC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTATGGCTGCGGGGCATTaGCAAGCCTTGTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFMAAGH*QALSEN
Trigger: ATTCTCAGACAAGGCTTGCAAATGCCCCGCAGCCAT...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTAAATGGAAACCGTGCTaGGTTCAGCTCTTGCGCGTG +
Preference number: 5 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGKWKPC*VQLLRV
Trigger: CACGCGCAAGAGCTGAACCAAGCACGGTTTCCATTT...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAAATAGGAGGAAGGATTaGCTAGGATGTCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKNRRKD*LGCLWP
Trigger: TGGCCAGAGACATCCTAGCAAATCCTTCCTCCTATT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGTCTGTACTAATTTCCTaGGAGTCAAGTCAGCTAAGC +
Preference number: 5 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVSVLIS*ESSQLS
Trigger: GCTTAGCTGACTTGACTCCAAGGAAATTAGTACAGA...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS TCA 90 bp CAGGATAATTTGGGTTTGCACCATCGTCAATTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTTTCTCATCCTTCCCATACTCATTCT +
Preference number: 5 (lower is better)
Translates to: QDNLGLHHRQFQASP*SEQKSVSHPSHTHS
Trigger: AGAATGAGTATGGGAAGGATGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAATTGACGATGGTGCAAACCCAAATTATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 90 bp AACCACAATTGGGTATCTGCAGGTTTGCCAGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACAAATCCTGAGTGTCTGGACTGGATT +
Preference number: 5 (lower is better)
Translates to: NHNWVSAGLPGEYSC*FHSGSTNPECLDWI
Trigger: AATCCAGTCCAGACACTCAGGATTTGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGATCCAGAATCCACAATaGTCAGATTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRIQNPQ*SDFSVP
Trigger: TGGGACTGAGAAATCTGACAATTGTGGATTCTGGAT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAATTGTTTCGGGTAAAATaGATGTGCTGCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKLFRVK*MCCRLL
Trigger: CAGCAACCTGCAGCACATCAATTTTACCCGAAACAA...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTACTGGATTTAGCCTCTaGGAGAGTCTTGATCCACAT +
Preference number: 5 (lower is better)
Translates to: KFPSATVIVMELSWAGSSTGFSL*ESLDPH
Trigger: ATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCCAGGGGAATATTCTaGCTGCTTTCATTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGARGIF*LLSFRQ
Trigger: CTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAGCCAGGGGAATATTCTaGCTGCTTTCATTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKARGIF*LLSFRQ
Trigger: CTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGC...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGTTTCATTCATATGTTaGGAAACCAGGTTACCAACA +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPVSFIC*ETRLPT
Trigger: TGTTGGTAACCTGGTTTCCAAACATATGAATGAAAC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGTTTCATTCATATGTTaGGAAACCAGGTTACCAACA +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLVSFIC*ETRLPT
Trigger: TGTTGGTAACCTGGTTTCCAAACATATGAATGAAAC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAAGCCCTGTGTGTGGCTaGTTTCATTCATATGTTTGG +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKSPVCG*FHSYVW
Trigger: CCAAACATATGAATGAAACAAGCCACACACAGGGCT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATT +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTEVDRI*IFSYKI
Trigger: AATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTC...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGAATACAACAAGGCATaGTTAGTTGTGGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASREYNKA*LVVVGK
Trigger: TTTGCCCACCACAACTAACAATGCCTTGTTGTATTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTTCTTTTCAACTGAAGTaGACAAAGGTTCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPSFQLK*TKVLWI
Trigger: TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGA...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGTCTTTTCAACTGAAGTaGACAAAGGTTCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTSFQLK*TKVLWI
Trigger: TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGA...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGCTAGAGAATTAGGTTaGTCACTGTTATACTGTTGT +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIARELG*SLLYCC
Trigger: ACAACAGTATAACAGTGACAAACCTAATTCTCTAGC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGATCACAATATCTCAGTaGCTTGTCATCTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTITISQ*LVISCI
Trigger: AATACAGGAGATGACAAGCAACTGAGATATTGTGAT...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGATCACAATATCTCAGTaGCTTGTCATCTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLITISQ*LVISCI
Trigger: AATACAGGAGATGACAAGCAACTGAGATATTGTGAT...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACAAAACTGTGTCCGAGCACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCGATACAACAATGTTATaGGTATTACAGGCAGTCCAA +
Preference number: 5 (lower is better)
Translates to: TKLCPSTLCAILCLTEAIDTTML*VLQAVQ
Trigger: TTGGACTGCCTGTAATACCAATAACATTGTTGTATC...GATGGCTTCCGTGAGACACAAGATGGCGCATAGTGTGCTCGGACACAGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACACTATGCGCCATCTTGTGTCTCACGGAAGCCATCTTTGCTCTCTACTGCACGGATACAACAATGTTATaGGTATTACAGGCAGTCCAA +
Preference number: 5 (lower is better)
Translates to: TLCAILCLTEAIFALYCTDTTML*VLQAVQ
Trigger: TTGGACTGCCTGTAATACCAATAACATTGTTGTATC...CGTGCAGTAGAGAGCAAAGATGGCTTCCGTGAGACACAAGATGGCGCATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTTGGAATGAAACCACTCTCCCAACTAGAGCCCAGAGCAAGGGACTTGACCTGGAAATTCACAGTGTTTaGCCTACAACACATATACAG +
Preference number: 5 (lower is better)
Translates to: TWNETTLPTRAQSKGLDLEIHSV*PTTHIQ
Trigger: CTGTATATGTGTTGTAGGCAAAACACTGTGAATTTC...CAGGTCAAGTCCCTTGCTCTGGGCTCTAGTTGGGAGAGTGGTTTCATTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AGTGAGAGTACTTGGATTCAGTCCCAATGGTGCTGGAAGCTAGGCTGGAGACCTGAAATTCACAGTGTTTaGCCTACAACACATATACAG +
Preference number: 5 (lower is better)
Translates to: SESTWIQSQWCWKLGWRPEIHSV*PTTHIQ
Trigger: CTGTATATGTGTTGTAGGCAAAACACTGTGAATTTC...AGGTCTCCAGCCTAGCTTCCAGCACCATTGGGACTGAATCCAAGTACTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCTCGCTGTGGGGTCTTGGACTAATACCAGGTCACGATaGAAGGGGAAATATATCTGT +
Preference number: 5 (lower is better)
Translates to: SRMWEFLRVAHLAVGSWTNTRSR*KGKYIC
Trigger: ACAGATATATTTCCCCTTCAATCGTGACCTGGTATT...AGTCCAAGACCCCACAGCGAGATGAGCAACTCTTAGGAATTCCCACATCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TGGTGCCATCTCTACTTAACCAGAGGGAGCACTCAATTGTTCAAAGCACCTGGGGTGCTTGAAACTGGTTaGCTAACAAATCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: WCHLYLTRGSTQLFKAPGVLETG*LTNLHL
Trigger: GAGATGAAGATTTGTTAGCAAACCAGTTTCAAGCAC...CCCAGGTGCTTTGAACAATTGAGTGCTCCCTCTGGTTAAGTAGAGATGGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAGCTATCAGAGGTCCTaGCACAGCCAAGGTATCCTT +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKSYQRS*HSQGIL
Trigger: AAGGATACCTTGGCTGTGCAAGGACCTCTGATAGCT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGCAAAAGTAAACTCTTaGGGTGTTGCAGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMAKVNS*GVAGKG
Trigger: CCCCTTCCCTGCAACACCCAAAGAGTTTACTTTTGC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGGCTGTCTCCCTTTTaGAAATGGAAACCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: HDERSGDHWTANSIKFKQRLSPF*KWKPCL
Trigger: CAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCCT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376208.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTGCAGCCCACAGACTTTaGTTGGCTTACAAAATGTTT +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLAAHRL*LAYKMF
Trigger: AAACATTTTGTAAGCCAACAAAAGTCTGTGGGCTGC...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAGACTGTTTGTACTTTaGTCGTCACAGAGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKRLFVL*SSQSQC
Trigger: ACACTGACTCTGTGACGACAAAAGTACAAACAGTCT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TGGCAGCACCTGACTGGGCCAAGAGACATGAGCGCTGTTGAAAAGAAATTAGTGGTGAAACTCAAGGATTaGCGTTTCTTAGGAATCTCT +
Preference number: 5 (lower is better)
Translates to: WQHLTGPRDMSAVEKKLVVKLKD*RFLGIS
Trigger: AGAGATTCCTAAGAAACGCAAATCCTTGAGTTTCAC...CACTAATTTCTTTTCAACAGCGCTCATGTCTCTTGGCCCAGTCAGGTGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS CCA 90 bp ATTTTCAATGACAGGGATCTTGGTCATTCCAATAATGACAGCATCTaGGCCACCTTCCGAAGAAGATGGAGTGTTACTCCCATTGGAGAT +
Preference number: 5 (lower is better)
Translates to: IFNDRDLGHSNNDSI*ATFRRRWSVTPIGD
Trigger: ATCTCCAATGGGAGTAACACTCCATCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATTGGAATGACCAAGATCCCTGTCATTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000376213.6
CDS-3UTR CAA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGAGCATGTAAATGGATaGCCCACCAGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGEHVNG*PTRISS
Trigger: TGAACTGATCCTGGTGGGCAATCCATTTACATGCTC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGAGCATGTAAATGGATaGCCCACCAGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFEHVNG*PTRISS
Trigger: TGAACTGATCCTGGTGGGCAATCCATTTACATGCTC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGCCTCTTGGAGAGTCTaGATCCACATAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGASWRV*IHIMSQ
Trigger: CTGTGACATTATGTGGATCAAGACTCTCCAAGAGGC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGATGGCAAACCACAATaGGGTATCTGCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIDGKPQ*GICRFA
Trigger: GGCAAACCTGCAGATACCCAATTGTGGTTTGCCATC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTTGGACTCATTCAATATaGCCCCGTTATAGAACCACT +
Preference number: 5 (lower is better)
Translates to: KFPSATVIVMELSWAGSSWTHSI*PRYRTT
Trigger: AGTGGTTCTATAACGGGGCAATATTGAATGAGTCCA...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGTCAATGACAGGGATCTaGGTCATTCCAATAATGACA +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRSMTGI*VIPIMT
Trigger: TGTCATTATTGGAATGACCAAGATCCCTGTCATTGA...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTCAATGACAGGGATCTaGGTCATTCCAATAATGACA +
Preference number: 5 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWSMTGI*VIPIMT
Trigger: TGTCATTATTGGAATGACCAAGATCCCTGTCATTGA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCACTCTATCACCTCATaGTTTGACAGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGHSITS*FDSWYQ
Trigger: CTGGTACCAGCTGTCAAACAATGAGGTGATAGAGTG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATATCCCAGTGGTTGTCTTaGTTCCTCCCATATTGCGGT +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWISQWLS*FLPYCG
Trigger: ACCGCAATATGGGAGGAACAAAGACAACCACTGGGA...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAGGCCAGCATATAACTaGAATGGACGTAAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRRPAYN*NGRKVY
Trigger: ATAAACCTTACGTCCATTCAAGTTATATGCTGGCCT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCTTGCTCCAGTACATaGAACGTTCAGCTAACCTCC +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIACSST*NVQLTS
Trigger: GGAGGTTAGCTGAACGTTCAATGTACTGGAGCAAGC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGAATACCAGGTCACGATaGAAGGGGAAATATATCTGT +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASRNTRSR*KGKYIC
Trigger: ACAGATATATTTCCCCTTCAATCGTGACCTGGTATT...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTAGTGACGTCAAGATGTaGTCTGGCCAGAATTTGCAG +
Preference number: 5 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGSDVKM*SGQNLQ
Trigger: CTGCAAATTCTGGCCAGACAACATCTTGACGTCACT...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAGACCAACTCCAGACTaGATGTTGCTGAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNRPTPD*MLLSSS
Trigger: TGAGGAGCTCAGCAACATCAAGTCTGGAGTTGGTCT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAAATGGGGGCGTAGCTaGATTGGATTCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKKWGRS*IGFILL
Trigger: CAACAGGATGAATCCAATCAAGCTACGCCCCCATTT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAAAATGGGGGCGTAGCTaGATTGGATTCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: LLSQAGRISKDREKLHFPKWGRS*IGFILL
Trigger: CAACAGGATGAATCCAATCAAGCTACGCCCCCATTT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TCAAAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGGCACTTGAAGGCATTTaGGGTGAGGAAGACAATCCT +
Preference number: 5 (lower is better)
Translates to: SKRTKEDTEMLTPRTMPMALEGI*GEEDNP
Trigger: AGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGC...CATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGTGCCAGAACCTTTATaGGAGAGTGACAGGCCCGAT +
Preference number: 5 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGVPEPL*ESDRPD
Trigger: ATCGGGCCTGTCACTCTCCAATAAAGGTTCTGGCAC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGAAGGTAATTGACATGTaGCAGATAACTGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKKVIDM*QITGLL
Trigger: TAACAGCCCAGTTATCTGCAACATGTCAATTACCTT...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAATTTCCTTCTGCGACAGTCATTGTCATGGAACTTTCCTGGGCTGGGAGTTCTAGACTGTTTGTACTTTaGTCGTCACAGAGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: KFPSATVIVMELSWAGSSRLFVL*SSQSQC
Trigger: ACACTGACTCTGTGACGACAAAAGTACAAACAGTCT...AGAACTCCCAGCCCAGGAAAGTTCCATGACAATGACTGTCGCAGAAGGAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GAGTTACCTCTGCATTGGTGTTCCCCAATCACAGCTCACAGTATATGCAGGCTTAAGAAAGCACAGGTCTaGTGTAGTATCTTGATTCCA +
Preference number: 5 (lower is better)
Translates to: ELPLHWCSPITAHSICRLKKAQV*CSILIP
Trigger: TGGAATCAAGATACTACACAAGACCTGTGCTTTCTT...AAGCCTGCATATACTGTGAGCTGTGATTGGGGAACACCAATGCAGAGGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGCTAGATGGAATTGCTaGTCCTCAGTCCAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGARWNC*SSVQLS
Trigger: GGACAGCTGGACTGAGGACAAGCAATTCCATCTAGC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAAATGGGACATGTACTTTCCTATCTAAACCTGGCAGCACCTGACTGGGCCAAGGATTACAGCAAATGGTaGAACATGAAGTGCGTGAAA +
Preference number: 5 (lower is better)
Translates to: KMGHVLSYLNLAAPDWAKDYSKW*NMKCVK
Trigger: TTTCACGCACTTCATGTTCAACCATTTGCTGTAATC...CTTGGCCCAGTCAGGTGCTGCCAGGTTTAGATAGGAAAGTACATGTCCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGACAAACTCGTCAGTTaGTTTCGGGTAAAATTGATG +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKDKLVS*FRVKLM
Trigger: CATCAATTTTACCCGAAACAAACTGACGAGTTTGTC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGAGCATGTAAATGGATaGCCCACCAGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNEHVNG*PTRISS
Trigger: TGAACTGATCCTGGTGGGCAATCCATTTACATGCTC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCCTCTTGGAGAGTCTaGATCCACATAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIASWRV*IHIMSQ
Trigger: CTGTGACATTATGTGGATCAAGACTCTCCAAGAGGC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATGCCTCTTGGAGAGTCTaGATCCACATAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNASWRV*IHIMSQ
Trigger: CTGTGACATTATGTGGATCAAGACTCTCCAAGAGGC...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGCCAGGGGAATATTCTaGCTGCTTTCATTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPARGIF*LLSFRQ
Trigger: CTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGCCAGGGGAATATTCTaGCTGCTTTCATTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIARGIF*LLSFRQ
Trigger: CTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGCGCTGGTTTGGGGTaGCCTTTCACAGTGAATGGA +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYSAGLG*PFTVNG
Trigger: TCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCAGGATAATTTGGGTTaGCACCATCGTCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHQDNLG*HHRQFQ
Trigger: CTGGAATTGACGATGGTGCAAACCCAAATTATCCTG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCAGGATAATTTGGGTTaGCACCATCGTCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFQDNLG*HHRQFQ
Trigger: CTGGAATTGACGATGGTGCAAACCCAAATTATCCTG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGCAGAGTCATCATCATaGCTGATAACGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYAESSS*LITEAG
Trigger: CCCAGCCTCCGTTATCAGCAATGATGATGACTCTGC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTCCCAGTGGTTGTCTTaGTTCCTCCCATATTGCGGT +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPSQWLS*FLPYCG
Trigger: ACCGCAATATGGGAGGAACAAAGACAACCACTGGGA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATTGTCAACTCCCTCGCTaGACTGCAGTTGCTACTGGA +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYCQLPR*TAVATG
Trigger: TCCAGTAGCAACTGCAGTCAAGCGAGGGAGTTGACA...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGACGTAAGGTTTATCTaGTCAACTCCCTCGCTTGAC +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIDVRFI*STPSLD
Trigger: GTCAAGCGAGGGAGTTGACAAGATAAACCTTACGTC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGCGTGACAAACCTGTGTaGGTTTTTGCTGATGGAATC +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGRDKPV*VFADGI
Trigger: GATTCCATCAGCAAAAACCAACACAGGTTTGTCACG...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ATACTGTGTCTATGGATGAAGAAGTACACACTGCTTCCCTCGAGAGCTTCTCGGGAAATTCACAGTGTTTaGCCTACAACACATATACAG +
Preference number: 5 (lower is better)
Translates to: ILCLWMKKYTLLPSRASREIHSV*PTTHIQ
Trigger: CTGTATATGTGTTGTAGGCAAAACACTGTGAATTTC...CCGAGAAGCTCTCGAGGGAAGCAGTGTGTACTTCTTCATCCATAGACACAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATAGTGACGTCAAGATGTaGTCTGGCCAGAATTTGCAG +
Preference number: 5 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNSDVKM*SGQNLQ
Trigger: CTGCAAATTCTGGCCAGACAACATCTTGACGTCACT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAAAAGGCAACTTCTTGCTaGGCTAGGTTATGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKKATSC*ARLWKL
Trigger: TAGCTTCCATAACCTAGCCAAGCAAGAAGTTGCCTT...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAATTGGATTCATCCTGTaGGTACACACACTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: LLSQAGRISKDREKLHFPIGFIL*VHTLQS
Trigger: TGACTGGAGTGTGTGTACCAACAGGATGAATCCAAT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AGGGCACTTGAAGGCATTTTGGGTGAGGAAGACAATCCTATCTTACTAGCAAAACTATACCAACTGGGATaGACCAACTCATTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RALEGILGEEDNPILLAKLYQLG*TNSFQS
Trigger: AGACTGGAATGAGTTGGTCAATCCCAGTTGGTATAG...TTTTGCTAGTAAGATAGGATTGTCTTCCTCACCCAAAATGCCTTCAAGTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTTTGGATGTCATACTATaGATAGAGGCCTCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGLDVIL*IEASLP
Trigger: TGGCAAGGAGGCCTCTATCAATAGTATGACATCCAA...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCTGGTATTGGTATATGCGTTaGGCTCTGAATGATCAACTA +
Preference number: 5 (lower is better)
Translates to: ERSGDHWTANSIKFKQSWYWYMR*ALNDQL
Trigger: TAGTTGATCATTCAGAGCCAAACGCATATACCAATA...CCAGCTTTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTCCTTTCATGCCAAACTaGGAGTGTCTTGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFPFMPN*ECLANL
Trigger: TAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGG...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATCCTTTCATGCCAAACTaGGAGTGTCTTGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHPFMPN*ECLANL
Trigger: TAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGG...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GCCTCTGGATTACAGCAAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGGCATGTTTCTGCTTTaGAGAAACTGCCCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ASGLQQMVEHEVRETQGFGMFLL*RNCPSL
Trigger: TAAAGAGGGGCAGTTTCTCAAAAGCAGAAACATGCC...AAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTTGCTGTAATCCAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAAAGAAAGCACAGGTCTaGTGTAGTATCTTGATTCCA +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKKKAQV*CSILIP
Trigger: TGGAATCAAGATACTACACAAGACCTGTGCTTTCTT...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGATTACAGCAAATGGTaGAACATGAAGTGCGTGAAA +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKDYSKW*NMKCVK
Trigger: TTTCACGCACTTCATGTTCAACCATTTGCTGTAATC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS TCA 90 bp AATGTGATAGTTGGTGCAAAATGCACAGTGAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTTTCCGCCACACAAGAGATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NVIVGAKCTVRLTES*SSPTRFSATQEICF
Trigger: GAAGCAGATCTCTTGTGTGGCGGAAAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTCACTGTGCATTTTGCACCAACTATCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 90 bp AATATTCTTGCTGCTTTCATTCAGGCAGTACAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTGGAGAGTCTTGATCCACATAATGTC +
Preference number: 5 (lower is better)
Translates to: NILAAFIQAVQILSV*TGFSLLESLDPHNV
Trigger: GACATTATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTGTACTGCCTGAATGAAAGCAGCAAGAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATATCCAGAATCCACAATaGTCAGATTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHIQNPQ*SDFSVP
Trigger: TGGGACTGAGAAATCTGACAATTGTGGATTCTGGAT...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGCCTCTTGGAGAGTCTaGATCCACATAATGTCACAG +
Preference number: 5 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGASWRV*IHIMSQ
Trigger: CTGTGACATTATGTGGATCAAGACTCTCCAAGAGGC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATACTGGATTTAGCCTCTaGGAGAGTCTTGATCCACAT +
Preference number: 5 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNTGFSL*ESLDPH
Trigger: ATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGT...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGACTGGATTTAGCCTCTaGGAGAGTCTTGATCCACAT +
Preference number: 5 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLTGFSL*ESLDPH
Trigger: ATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp ACCTCACCATCAAAATCAGGTGGCTGGGACGTTCTTTTGTCTCTGAAGACCAAAGTTTCATTCATATGTTaGGAAACCAGGTTACCAACA +
Preference number: 5 (lower is better)
Translates to: TSPSKSGGWDVLLSLKTKVSFIC*ETRLPT
Trigger: TGTTGGTAACCTGGTTTCCAAACATATGAATGAAAC...TTTGGTCTTCAGAGACAAAAGAACGTCCCAGCCACCTGATTTTGATGGTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTGGACTCATTCAATATaGCCCCGTTATAGAACCACT +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGWTHSI*PRYRTT
Trigger: AGTGGTTCTATAACGGGGCAATATTGAATGAGTCCA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATGGACTCATTCAATATaGCCCCGTTATAGAACCACT +
Preference number: 5 (lower is better)
Translates to: LLSQAGRISKDREKLHFPWTHSI*PRYRTT
Trigger: AGTGGTTCTATAACGGGGCAATATTGAATGAGTCCA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATAGGGTATGGATGCCCTaGATGTTCTTCCTCATGTGG +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYRVWMP*MFFLMW
Trigger: CCACATGAGGAAGAACATCAAGGGCATCCATACCCT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGCTTCTCGGAGTCTTaGATGTTAATACTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGSFSES*MLILSE
Trigger: CTCTGACAGTATTAACATCAAAGACTCCGAGAAGCT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATGAATACAACAAGGCATaGTTAGTTGTGGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHEYNKA*LVVVGK
Trigger: TTTGCCCACCACAACTAACAATGCCTTGTTGTATTC...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAAGACCTTTAGGGACTaGTCAGAAGGTATAAGTGGA +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGKTFRD*SEGISG
Trigger: TCCACTTATACCTTCTGACAAGTCCCTAAAGGTCTT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTCAAGAACCTTTGACTaGAGCAGCAGTGATTCATTC +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHSRTFD*SSSDSF
Trigger: GAATGAATCACTGCTGCTCAAGTCAAAGGTTCTTGA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp ACTGTTAGTTGGTGCATTCACTCTAGGATGTGGGAATTCCTAAGAGTTGCTCATTGGCAAAATAGTTGCTaGGTGGTGGTTGTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: TVSWCIHSRMWEFLRVAHWQNSC*VVVVVK
Trigger: TTTCACAACAACCACCACCAAGCAACTATTTTGCCA...ATGAGCAACTCTTAGGAATTCCCACATCCTAGAGTGAATGCACCAACTAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGTATTCAGGTGTCACTTaGAAATCAGCCAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGYSGVT*KSAKMQ
Trigger: CTGCATCTTGGCTGATTTCAAAGTGACACCTGAATA...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCACCCAAGATTGATGATTaGGGGATTTTGCTGGTTAGT +
Preference number: 5 (lower is better)
Translates to: LLSQAGRISKDREKLHFPPKIDD*GILLVS
Trigger: ACTAACCAGCAAAATCCCCAAATCATCAATCTTGGG...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCACAAGAGAACCCAAGATaGATGATTTGGGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSQENPR*MIWGFC
Trigger: GCAAAATCCCCAAATCATCAATCTTGGGTTCTCTTG...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAAGCAATAAACTGCATTaGGAGTTATCTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: HDERSGDHWTANSIKFKQSNKLH*ELSGVM
Trigger: CATCACTCCAGATAACTCCAAATGCAGTTTATTGCT...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCAGGCTGTCTCCCTTTTaGAAATGGAAACCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIRLSPF*KWKPCL
Trigger: CAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCCT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGGCTGGGACGTTCTTTaGTCTCTGAAGACCAAAACT +
Preference number: 5 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIGWDVL*SLKTKT
Trigger: AGTTTTGGTCTTCAGAGACAAAAGAACGTCCCAGCC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS GCA 90 bp GGTAACATGTATTTTAGTACAGATGTATTTGGACTCATTCAATATTaGCCCGTTATAGAACCACTGAAGCGCTGGTTTGGGGTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: GNMYFSTDVFGLIQY*PVIEPLKRWFGVAF
Trigger: AAAGGCAACCCCAAACCAGCGCTTCAGTGGTTCTATAACGGGGCAATATTGAATGAGTCCAAATACATCTGTACTAAAATACATGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAATCCAGAATCCACAATaGTCAGATTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIIQNPQ*SDFSVP
Trigger: TGGGACTGAGAAATCTGACAATTGTGGATTCTGGAT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGAGCATGTAAATGGATaGCCCACCAGGATCAGTTCA +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYEHVNG*PTRISS
Trigger: TGAACTGATCCTGGTGGGCAATCCATTTACATGCTC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CATGATGAAAGATCCGGGGATCACTGGACAGCAAACTCCATCAAGTTTAAGCAAGTTTCATTCATATGTTaGGAAACCAGGTTACCAACA +
Preference number: 5 (lower is better)
Translates to: HDERSGDHWTANSIKFKQVSFIC*ETRLPT
Trigger: TGTTGGTAACCTGGTTTCCAAACATATGAATGAAAC...TTGCTTAAACTTGATGGAGTTTGCTGTCCAGTGATCCCCGGATCTTTCATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCAGCCCTGTGTGTGGCTaGTTTCATTCATATGTTTGG +
Preference number: 5 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGISPVCG*FHSYVW
Trigger: CCAAACATATGAATGAAACAAGCCACACACAGGGCT...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATT +
Preference number: 5 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSEVDRI*IFSYKI
Trigger: AATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATCAATGACAGGGATCTaGGTCATTCCAATAATGACA +
Preference number: 5 (lower is better)
Translates to: LLSQAGRISKDREKLHFPSMTGI*VIPIMT
Trigger: TGTCATTATTGGAATGACCAAGATCCCTGTCATTGA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGAGACCATGCACAATTTaGCTTGCACAGTTAAAAGGA +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGRPCTI*LAQLKG
Trigger: TCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCT...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATGACGTAAGGTTTATCTaGTCAACTCCCTCGCTTGAC +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYDVRFI*STPSLD
Trigger: GTCAAGCGAGGGAGTTGACAAGATAAACCTTACGTC...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCCGTGACAAACCTGTGTaGGTTTTTGCTGATGGAATC +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPRDKPV*VFADGI
Trigger: GATTCCATCAGCAAAAACCAACACAGGTTTGTCACG...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGTAGTTTTCACAAATTaGATGGAAGGCCGTATTTGG +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGVVFTN*MEGRIW
Trigger: CCAAATACGGCCTTCCATCAAATTTGTGAAAACTAC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATACTTTCCATGTCAGGTaGAGAGAAGCTGGTCACATG +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYTFHVR*REAGHM
Trigger: CATGTGACCAGCTTCTCTCAACCTGACATGGAAAGT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCAACAGTCTTGTCTTTATaGGTATATGCGTTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: LLSQAGRISKDREKLHFPTVLSL*VYAFGS
Trigger: AGAGCCAAACGCATATACCAATAAAGACAAGACTGT...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGACAAACTCGTCAGTTaGTTTCGGGTAAAATTGATG +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIDKLVS*FRVKLM
Trigger: CATCAATTTTACCCGAAACAAACTGACGAGTTTGTC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GGTTTGTCACTGTTATACTGTTGTAGTTTTCACAAATTTGATGGAAGGCCGTATACTGGATTTAGCCTCTaGGAGAGTCTTGATCCACAT +
Preference number: 5 (lower is better)
Translates to: GLSLLYCCSFHKFDGRPYTGFSL*ESLDPH
Trigger: ATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGT...ATACGGCCTTCCATCAAATTTGTGAAAACTACAACAGTATAACAGTGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAGCTTAGGACTGGAGTGTTTCCTCTAGGAGGTCTAAGTATACTATACTTGGGTGTTTCATTCATATGTTaGGAAACCAGGTTACCAACA +
Preference number: 5 (lower is better)
Translates to: KLRTGVFPLGGLSILYLGVSFIC*ETRLPT
Trigger: TGTTGGTAACCTGGTTTCCAAACATATGAATGAAAC...ACCCAAGTATAGTATACTTAGACCTCCTAGAGGAAACACTCCAGTCCTAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp GAAGATAAGCCAAATGAAAAGGAGAGTTCCAAATACCAGGTCACGATTGAAGGGGTTTCATTCATATGTTaGGAAACCAGGTTACCAACA +
Preference number: 5 (lower is better)
Translates to: EDKPNEKESSKYQVTIEGVSFIC*ETRLPT
Trigger: TGTTGGTAACCTGGTTTCCAAACATATGAATGAAAC...CCCTTCAATCGTGACCTGGTATTTGGAACTCTCCTTTTCATTTGGCTTATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCTGGACTCATTCAATATaGCCCCGTTATAGAACCACT +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPWTHSI*PRYRTT
Trigger: AGTGGTTCTATAACGGGGCAATATTGAATGAGTCCA...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGTAGTTTTCACAAATTaGATGGAAGGCCGTATTTGG +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIVVFTN*MEGRIW
Trigger: CCAAATACGGCCTTCCATCAAATTTGTGAAAACTAC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp GTAGGAAGTGGCAGAGCATATACACAATCCGAGAAGGAAAGTGTGATTGATTCAGTAAAAAGAGGAATTTaGCCATCAACCCAGAACAAA +
Preference number: 5 (lower is better)
Translates to: VGSGRAYTQSEKESVIDSVKRGI*PSTQNK
Trigger: TTTGTTCTGGGTTGATGGCAAAATTCCTCTTTTTAC...TGAATCAATCACACTTTCCTTCTCGGATTGTGTATATGCTCTGCCACTTCCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp TTACTCTCACAGGCTGGCAGAATTAGTAAAGACAGAGAAAAGCTGCATTTCCCATATTGGTATATGCGTTaGGCTCTGAATGATCAACTA +
Preference number: 5 (lower is better)
Translates to: LLSQAGRISKDREKLHFPYWYMR*ALNDQL
Trigger: TAGTTGATCATTCAGAGCCAAACGCATATACCAATA...TGGGAAATGCAGCTTTTCTCTGTCTTTACTAATTCTGCCAGCCTGTGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGCAGCCCACAGACTTTaGTTGGCTTACAAAATGTTT +
Preference number: 5 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGAAHRL*LAYKMF
Trigger: AAACATTTTGTAAGCCAACAAAAGTCTGTGGGCTGC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp TTCATGTTTCTCCTAAAGAATCACAAGATTTGGAAACCTAGGCTCCCATTCCTGAAGGTAATTGACATGTaGCAGATAACTGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: FMFLLKNHKIWKPRLPFLKVIDM*QITGLL
Trigger: TAACAGCCCAGTTATCTGCAACATGTCAATTACCTT...CAGGAATGGGAGCCTAGGTTTCCAAATCTTGTGATTCTTTAGGAGAAACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCTTAGCCTCAGACTGTTaGTACTTTTGTCGTCACAGA +
Preference number: 5 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGILASDC*YFCRHR
Trigger: TCTGTGACGACAAAAGTACAAACAGTCTGAGGCTAA...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGACAAACTCGTCAGTTaGTTTCGGGTAAAATTGATG +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPDKLVS*FRVKLM
Trigger: CATCAATTTTACCCGAAACAAACTGACGAGTTTGTC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATT +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPEVDRI*IFSYKI
Trigger: AATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATT +
Preference number: 5 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIEVDRI*IFSYKI
Trigger: AATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CAATCCATAGGATTCTGTGAAAGGTCTTCATCAAGCAATAACGTATTTAGTGGCGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATT +
Preference number: 5 (lower is better)
Translates to: QSIGFCERSSSSNNVFSGEVDRI*IFSYKI
Trigger: AATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTC...GCCACTAAATACGTTATTGCTTGATGAAGACCTTTCACAGAATCCTATGGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAGACCATGCACAATTTaGCTTGCACAGTTAAAAGGA +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPRPCTI*LAQLKG
Trigger: TCCTTTTAACTGTGCAAGCAAAATTGTGCATGGTCT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCAGGCCAGCATATAACTaGAATGGACGTAAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPRPAYN*NGRKVY
Trigger: ATAAACCTTACGTCCATTCAAGTTATATGCTGGCCT...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAGCTAGAGAATTAGGTTaGTCACTGTTATACTGTTGT +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWIARELG*SLLYCC
Trigger: ACAACAGTATAACAGTGACAAACCTAATTCTCTAGC...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp TCTGGACATGAATCCACCTCTTTTCAACTGAAGTTGACAAAGGTTCTGTGGATAAGCCTGATTATGACATaGGTTCAGTGTACAAGAATT +
Preference number: 5 (lower is better)
Translates to: SGHESTSFQLKLTKVLWISLIMT*VQCTRI
Trigger: AATTCTTGTACACTGAACCAATGTCATAATCAGGCT...TATCCACAGAACCTTTGTCAACTTCAGTTGAAAAGAGGTGGATTCATGTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS-3UTR CAA 90 bp AAGAGAACTAAAGAGGACACTGAGATGTTAACGCCAAGAACTATGCCGATGAATTTTGTTTCTGTTTGTTaGTTTCAGCTCAGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: KRTKEDTEMLTPRTMPMNFVSVC*FQLRRC
Trigger: ACACCTTCTGAGCTGAAACAAACAAACAGAAACAAA...ATTCATCGGCATAGTTCTTGGCGTTAACATCTCAGTGTCCTCTTTAGTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS-3UTR CAA 90 bp AAATGGTTGAACATGAAGTGCGTGAAACTCAAGGATTTGCGTTTCTTAGGAATCGTTTCATTCATATGTTaGGAAACCAGGTTACCAACA +
Preference number: 5 (lower is better)
Translates to: KWLNMKCVKLKDLRFLGIVSFIC*ETRLPT
Trigger: TGTTGGTAACCTGGTTTCCAAACATATGAATGAAAC...GATTCCTAAGAAACGCAAATCCTTGAGTTTCACGCACTTCATGTTCAACCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359847.4
ENST00000395882.6
CDS-3UTR CAA 90 bp CTCCCTTTCAATCTGGCTCATGTTATAAAGATGTCAAGTTTAGCAAAATTCCCCGCTAGAGAATTAGGTTaGTCACTGTTATACTGTTGT +
Preference number: 5 (lower is better)
Translates to: LPFNLAHVIKMSSLAKFPARELG*SLLYCC
Trigger: ACAACAGTATAACAGTGACAAACCTAATTCTCTAGC...GGGGAATTTTGCTAAACTTGACATCTTTATAACATGAGCCAGATTGAAAGGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS TCA 72 bp GGCGCCTGGGTCCAGGCTCCTGCTACCGCCGGGGACTaGGCGCGTAGAGCGCGAGCGAAGCAGCCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: GAWVQAPATAGD*ARRARAKQPAR
Trigger: CCTCGCTGGCTGCTTCGCTCGCGCTCTACGCGCTCAGTCCCCGGCGGTAGCAGGAGCCTGGACCCAGGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 72 bp CGCGTAGAGCGCGAGCGAAGCAGCCAGCGAGGCTCCTaGTCCAACCCAATTCCGGGAGCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: RVERERSSQRGS*SNPIPGAAAAA
Trigger: GGCGGCGGCGGCGGCTCCCGGAATTGGGTTGGAGCAGGAGCCTCGCTGGCTGCTTCGCTCGCGCTCTACGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 72 bp CCTCGAGGCTTGCGCGTGTTCATGTGTGCTAGGGTGTaGGCGAACGCGTGCCCTGCGCCCGCGCTGCCCGGA +
Preference number: 6 (lower is better)
Translates to: PRGLRVFMCARV*ANACPAPALPG
Trigger: TCCGGGCAGCGCGGGCGCAGGGCACGCGTTCGCGCACACCCTAGCACACATGAACACGCGCAAGCCTCGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS CAA 90 bp GCACCGACCGGCGGCGCTCCCGGGACTCTCTGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGTCCGGTATGCACCTCGAGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: APTGGAPGTLWGADS*LDANGGPVCTSRPG
Trigger: GCCCGGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGCGCCGCCGGTCGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 72 bp CGCGTGTTCATGTGTGCTAGGGTGTGCGCGAACGCGTaGCCTGCGCCCGCGCTGCCCGGAGCACGATATGCA +
Preference number: 6 (lower is better)
Translates to: RVFMCARVCANA*PAPALPGARYA
Trigger: TGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGCACGCGTTCGCGCACACCCTAGCACACATGAACACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp CTCCAACCCAATTCCGGGAGCCGCCGCCGCCGCCTCTaGTACTGCTGGCGAAGTGACGTGAGGGCTGACGCA +
Preference number: 6 (lower is better)
Translates to: LQPNSGSRRRRL*YCWRSDVRADA
Trigger: TGCGTCAGCCCTCACGTCACTTCGCCAGCAGTAGCAGAGGCGGCGGCGGCGGCTCCCGGAATTGGGTTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376208.6
ENST00000395882.6
CDS CCA 72 bp GCGGGCGTGCCGAGTCCAGCTTATCAGAGGCTGAGCTaGTCCGGAGCGAAGAGTGTTCCGGCAGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: AGVPSPAYQRLS*SGAKSVPAGGR
Trigger: CCTGCCGCCTGCCGGAACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATAAGCTGGACTCGGCACGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 90 bp GCACCGACCGGCGGCGCTCCCGGGACTCTCTGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGTCCGGTATGCACCTCGAGGCTTGCG +
Preference number: 6 (lower is better)
Translates to: APTGGAPGTLWGADS*LDANGGPVCTSRLA
Trigger: CGCAAGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGCGCCGCCGGTCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS TCA 72 bp GCCGCCGCCGCCTCTGCTACTGCTGGCGAAGTGACGTaGGGGCTGACGCAGAGCAGGGGCAGAAACTCCAGA +
Preference number: 6 (lower is better)
Translates to: AAAASATAGEVT*GLTQSRGRNSR
Trigger: TCTGGAGTTTCTGCCCCTGCTCTGCGTCAGCCCTCACGTCACTTCGCCAGCAGTAGCAGAGGCGGCGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376208.6
ENST00000395882.6
CDS GCA 72 bp GCAGATTCCTTGTTAGATGCGAATGGGGGTCCGGTATaGACCTCGAGGCCGGGCTCCGGCGCCTCACGCCCG +
Preference number: 6 (lower is better)
Translates to: ADSLLDANGGPV*TSRPGSGASRP
Trigger: CGGGCGTGAGGCGCCGGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 72 bp TTTCCCCCACCCGTGCGGGGAGGCCTTCCCTGCGCTTaGGGCTCTCTTAACTCCTCGGTGCTTGTTGCGGGC +
Preference number: 6 (lower is better)
Translates to: FPPPVRGGLPCA*GSLNSSVLVAG
Trigger: GCCCGCAACAAGCACCGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGCCTCCCCGCACGGGTGGGGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp GCAGCATCTGCGACTGCGTCAGTTCCGTGGGCGGGTTaGCCTCAGCCATCAGCACGGCATCAGGGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: AASATASVPWAG*PQPSARHQGRV
Trigger: CACACGGCCCTGATGCCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 72 bp CTAGGGTGTGCGCGAACGCGTGCCCTGCGCCCGCGCTaGCCGGAGCACGATATGCATCCAGCTACGAAGAAG +
Preference number: 6 (lower is better)
Translates to: LGCARTRALRPR*PEHDMHPATKK
Trigger: CTTCTTCGTAGCTGGATGCATATCGTGCTCCGGGCAGCGCGGGCGCAGGGCACGCGTTCGCGCACACCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp CAGCAGAAGCCCCAGAGCCGCGCCATGGCGGGTCCATaGCACCTTATCCAGGACGACATCCCTAGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: QQKPQSRAMAGP*HLIQDDIPSSQ
Trigger: CTGGCTGCTAGGGATGTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGGGCTTCTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 72 bp GGCGGCGCTCCCGGGACTCTCTGGGGCGCAGATTCCTaGTTAGATGCGAATGGGGGTCCGGTATGCACCTCG +
Preference number: 6 (lower is better)
Translates to: GGAPGTLWGADS*LDANGGPVCTS
Trigger: CGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGAGCGCCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 72 bp TGCAGCATCTGCGACTGCGTCAGTTCCGTGGGCGGGTaGCCCTCAGCCATCAGCACGGCATCAGGGCCGTGT +
Preference number: 6 (lower is better)
Translates to: CSICDCVSSVGG*PSAISTASGPC
Trigger: ACACGGCCCTGATGCCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS CAA 90 bp TGGGCTATATGCAGCATCTGCGACTGCGTCAGTTCCGTGGGCGGGTaGCCCTCAGCCATCAGCACGGCATCAGGGCCGTGTGCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: WAICSICDCVSSVGG*PSAISTASGPCALR
Trigger: CCTCAGGGCACACGGCCCTGATGCCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS TCA 72 bp TTGTTGCGGGCGTGCCGAGTCCAGCTTATCAGAGGCTaGGCTGGTCCGGAGCGAAGAGTGTTCCGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: LLRACRVQLIRG*AGPERRVFRQA
Trigger: CGCCTGCCGGAACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATAAGCTGGACTCGGCACGCCCGCAACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp TCCCGGGACTCTCTGGGGCGCAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATGCACCTCGAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: SRDSLGRRFLVR*EWGSGMHLEAG
Trigger: CCCGGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS GCA 72 bp GCGGCGATCTGCTGGGCTATATGCAGCATCTGCGACTaGGTCAGTTCCGTGGGCGGGTTGCCCTCAGCCATC +
Preference number: 6 (lower is better)
Translates to: AAICWAICSICD*VSSVGGLPSAI
Trigger: GATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCAGCAGATCGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 72 bp ATGCCCGCGGCGATCTGCTGGGCTATATGCAGCATCTaGGACTGCGTCAGTTCCGTGGGCGGGTTGCCCTCA +
Preference number: 6 (lower is better)
Translates to: MPAAICWAICSI*DCVSSVGGLPS
Trigger: TGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCAGCAGATCGCCGCGGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS CCA 72 bp GACTCTCTGGGGCGCAGATTCCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTCGAGGCCGGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: DSLGRRFLVRCE*GSGMHLEAGLR
Trigger: CCGGAGCCCGGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000395882.6
CDS CAA 72 bp GAAGGGTCGCTGCACCAGATCCGAGAGGCACTGCATTaGCAGGACGTGGGACAGGCGAAAGCGGCCCTCCAG +
Preference number: 6 (lower is better)
Translates to: EGSLHQIREALH*QDVGQAKAALQ
Trigger: CTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 90 bp ATGCCAGGAGAAGGGTCGCTGCACCAGATCCGAGAGGCACTGCATTaGCAGGACGTGGGACAGGCGAAAGCGGCCCTCCAGAAGCCCACA +
Preference number: 6 (lower is better)
Translates to: MPGEGSLHQIREALH*QDVGQAKAALQKPT
Trigger: TGTGGGCTTCTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp AAGGGTCGCTGCACCAGATCCGAGAGGCACTGCATTTaGAGGACGTGGGACAGGCGAAAGCGGCCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: KGRCTRSERHCI*RTWDRRKRPSR
Trigger: TCTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp GGGCTATATGCAGCATCTGCGACTGCGTCAGTTCCGTaGGCGGGTTGCCCTCAGCCATCAGCACGGCATCAG +
Preference number: 6 (lower is better)
Translates to: GLYAASATASVP*AGCPQPSARHQ
Trigger: CTGATGCCGTGCTGATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 72 bp GCCTTCCCTGCGCTTGCGGCTCTCTTAACTCCTCGGTaGTTGTTGCGGGCGTGCCGAGTCCAGCTTATCAGA +
Preference number: 6 (lower is better)
Translates to: AFPALAALLTPR*LLRACRVQLIR
Trigger: TCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp TCCCGGGACTCTCTGGGGCGCAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATGCACCTCGAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: SRDSLGRRFLVR*EWGSGMHLEAC
Trigger: GCAAGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS CCA 72 bp TGCACCAGATCCGAGAGGCACTGCATTTGCAGGACGTaGGACAGGCGAAAGCGGCCCTCCAGAAGCCCACAA +
Preference number: 6 (lower is better)
Translates to: CTRSERHCICRT*DRRKRPSRSPQ
Trigger: TTGTGGGCTTCTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 72 bp TTCCCTGCGCTTGCGGCTCTCTTAACTCCTCGGTGCTaGTTGCGGGCGTGCCGAGTCCAGCTTATCAGAGGC +
Preference number: 6 (lower is better)
Translates to: FPALAALLTPRC*LRACRVQLIRG
Trigger: GCCTCTGATAAGCTGGACTCGGCACGCCCGCAACAAGCACCGAGGAGTTAAGAGAGCCGCAAGCGCAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 72 bp TGGGGGCACGTGCGGGGTCGCTGCAGGACTCGGCCCTaGGTGATACACTCTATCACCTCATTGTTTGACAGC +
Preference number: 6 (lower is better)
Translates to: WGHVRGRCRTRP*VIHSITSLFDS
Trigger: GCTGTCAAACAATGAGGTGATAGAGTGTATCACTCAGGGCCGAGTCCTGCAGCGACCCCGCACGTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 72 bp GGTCAGGAGCTCGGCCTCACGGTGGAAGTCCTTGCGTaGATTGTCACTGGCATCCTTCAGGGTCTTCACTGC +
Preference number: 6 (lower is better)
Translates to: GQELGLTVEVLA*IVTGILQGLHC
Trigger: GCAGTGAAGACCCTGAAGGATGCCAGTGACAATGCACGCAAGGACTTCCACCGTGAGGCCGAGCTCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 72 bp TCCCGGGACTCTCTGGGGCGCAGATTCCTTGTTAGATaGGAATGGGGGTCCGGTATGCACCTCGAGGCTCTA +
Preference number: 6 (lower is better)
Translates to: SRDSLGRRFLVR*EWGSGMHLEAL
Trigger: TAGAGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTCCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359847.4
CDS CCA 72 bp GACTCTCTGGGGCGCAGATTCCTTGTTAGATGCGAATaGGGGTCCGGTATGCACCTCGAGGCTTGCGCGTGT +
Preference number: 6 (lower is better)
Translates to: DSLGRRFLVRCE*GSGMHLEACAC
Trigger: ACACGCGCAAGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAAGGAATCTGCGCCCCAGAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376213.6
CDS TCA 72 bp GGCACGTGCGGGGTCGCTGCAGGACTCGGCCCTGAGTaGTACACTCTATCACCTCATTGTTTGACAGCTGGT +
Preference number: 6 (lower is better)
Translates to: GTCGVAAGLGPE*YTLSPHCLTAG
Trigger: ACCAGCTGTCAAACAATGAGGTGATAGAGTGTATCACTCAGGGCCGAGTCCTGCAGCGACCCCGCACGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 72 bp ATCTCGGAAATGCCACGATGCCAGGAGAAGGGTCGCTaGACCAGATCCGAGAGGCACTGCATTTGCAGGACG +
Preference number: 6 (lower is better)
Translates to: ISEMPRCQEKGR*TRSERHCICRT
Trigger: CGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 72 bp CCTTGGCCAAGTTCTGAAGGAGGGTATGGATGCCCTTaGTGTTCTTCCTCATGTGGGGCTCTCGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: PWPSSEGGYGCP*CSSSCGALAAS
Trigger: GCTGGCAGCGAGAGCCCCACATGAGGAAGAACATCAAGGGCATCCATACCCTCCTTCAGAACTTGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277120.8
ENST00000323115.10
ENST00000376213.6
CDS GCA 72 bp CTCAGGATCTACACTGTTAGGCTCCAATCTCGGAAATaGCACGATGCCAGGAGAAGGGTCGCTGCACCAGAT +
Preference number: 6 (lower is better)
Translates to: LRIYTVRLQSRK*HDARRRVAAPD
Trigger: ATCTGGTGCAGCGACCCTTCTCCTGGCATCGTGGCATTTCCGAGATTGGAGCCTAACAGTGTAGATCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp TGGCTATTAGAGTGTAGTCCCCATTGTTCATGTGAGTaGGATTATCCAGCTGGAGGCAGCCGTGGTACTCCG +
Preference number: 6 (lower is better)
Translates to: WLLECSPHCSCE*DYPAGGSRGTP
Trigger: CGGAGTACCACGGCTGCCTCCAGCTGGATAATCCCACTCACATGAACAATGGGGACTACACTCTAATAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 72 bp AGGAGCCTCCAAATACCAAATTATTATCAGGCGGTCTaGGGGGAACCTCTGGGCCATGTGTCTGGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: RSLQIPNYYQAV*GEPLGHVSGLS
Trigger: GCTCAAGCCAGACACATGGCCCAGAGGTTCCCCCAAGACCGCCTGATAATAATTTGGTATTTGGAGGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304053.10
ENST00000376208.6
CDS TCA 72 bp CTCTTCTACAATCGCGGTAGAGGCTGTCTCCCTTTTTaGAATGGAAACCGTGCTTGGTTCAGCTCTTGCGCG +
Preference number: 6 (lower is better)
Translates to: LFYNRGRGCLPF*NGNRAWFSSCA
Trigger: CGCGCAAGAGCTGAACCAAGCACGGTTTCCATTTCAAAAAGGGAGACAGCCTCTACCGCGATTGTAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359847.4
ENST00000376208.6
ENST00000395882.6
CDS GCA 72 bp TCCTTCCTCCACAGTGAGGTTAGGTGCGGCCAGATTTaGAGATGGCAAACCACAATTGGGTATCTGCAGGTT +
Preference number: 6 (lower is better)
Translates to: SFLHSEVRCGQI*RWQTTIGYLQV
Trigger: AACCTGCAGATACCCAATTGTGGTTTGCCATCTGCAAATCTGGCCGCACCTAACCTCACTGTGGAGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 72 bp GTGACAAACCGTAACTATTCTGCGGGTGCAGTTAAATaGTGGCTGCGGGGCATTTGCAAGCCTTGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: VTNRNYSAGAVK*WLRGICKPCLR
Trigger: TCTCAGACAAGGCTTGCAAATGCCCCGCAGCCATCATTTAACTGCACCCGCAGAATAGTTACGGTTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp GACAGGGATCTTGGTCATTCCAATAATGACAGCATCTaGGCCACCTTCCGAAGAAGATGGAGTGTTACTCCC +
Preference number: 6 (lower is better)
Translates to: DRDLGHSNNDSI*ATFRRRWSVTP
Trigger: GGGAGTAACACTCCATCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATTGGAATGACCAAGATCCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000376213.6
CDS TCA 72 bp GCCTTTCACAGTGAATGGAATGCACCAGTGGTGGTCTaGGGTTGGAGATTCGAGAAATGTGATAGTTGGTGC +
Preference number: 6 (lower is better)
Translates to: AFHSEWNAPVVV*GWRFEKCDSWC
Trigger: GCACCAACTATCACATTTCTCGAATCTCCAACCTCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 72 bp TTGGGTTTGCACCATCGTCAATTCCAGGCCAGCCCATaGAGTGAGCAGAAATCTGTTTCTCATCCTTCCCAT +
Preference number: 6 (lower is better)
Translates to: LGLHHRQFQASP*SEQKSVSHPSH
Trigger: ATGGGAAGGATGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAATTGACGATGGTGCAAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp AATAATGACAGCATCTGGGCCACCTTCCGAAGAAGATaGAGTGTTACTCCCATTGGAGATGTGATGGAGTGG +
Preference number: 6 (lower is better)
Translates to: NNDSIWATFRRR*SVTPIGDVMEW
Trigger: CCACTCCATCACATCTCCAATGGGAGTAACACTCCATCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000376208.6
ENST00000376213.6
CDS TCA 72 bp TTTGCACCATCGTCAATTCCAGGCCAGCCCATGAAGTaGGCAGAAATCTGTTTCTCATCCTTCCCATACTCA +
Preference number: 6 (lower is better)
Translates to: FAPSSIPGQPMK*AEICFSSFPYS
Trigger: TGAGTATGGGAAGGATGAGAAACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAATTGACGATGGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 72 bp CATAGACCGAGAGATGTTCCCGACCGGTTTTATCAGTaGCGTCTGTGGAAGGGATTTCATTACTTCTGTTCG +
Preference number: 6 (lower is better)
Translates to: HRPRDVPDRFYQ*RLWKGFHYFCS
Trigger: CGAACAGAAGTAATGAAATCCCTTCCACAGACGTCACTGATAAAACCGGTCGGGAACATCTCTCGGTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp TGGGTATCTGCAGGTTTGCCAGGGGAATATTCTTGCTaGTTTCATTCAGGCAGTACAAATCCTGAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: WVSAGLPGEYSC*FHSGSTNPECL
Trigger: CAGACACTCAGGATTTGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp TGCAGATGGCAAACCACAATTGGGTATCTGCAGGTTTaGCAGGGGAATATTCTTGCTGCTTTCATTCAGGCA +
Preference number: 6 (lower is better)
Translates to: CRWQTTIGYLQV*QGNILAAFIQA
Trigger: TGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATTGTGGTTTGCCATCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp GCCAGATTTGCAGATGGCAAACCACAATTGGGTATCTaGAGGTTTGCCAGGGGAATATTCTTGCTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: ARFADGKPQLGI*RFARGIFLLLS
Trigger: TGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATTGTGGTTTGCCATCTGCAAATCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp GCTGCTTTCATTCAGGCAGTACAAATCCTGAGTGTCTaGACTGGATTTAGCCTCTTGGAGAGTCTTGATCCA +
Preference number: 6 (lower is better)
Translates to: AAFIQAVQILSV*TGFSLLESLDP
Trigger: TGGATCAAGACTCTCCAAGAGGCTAAATCCAGTCCAGACACTCAGGATTTGTACTGCCTGAATGAAAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp TTGGGGTTGCCTTTCACAGTGAATGGAATGCACCAGTaGTGGTCTGAGGTTGGAGATTCGAGAAATGTGATA +
Preference number: 6 (lower is better)
Translates to: LGLPFTVNGMHQ*WSEVGDSRNVI
Trigger: TATCACATTTCTCGAATCTCCAACCTCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp ATTCAATATTGCCCCGTTATAGAACCACTGAAGCGCTaGTTTGGGGTTGCCTTTCACAGTGAATGGAATGCA +
Preference number: 6 (lower is better)
Translates to: IQYCPVIEPLKR*FGVAFHSEWNA
Trigger: TGCATTCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTCTATAACGGGGCAATATTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 72 bp GTTGGTGCAAAATGCACAGTGAGGTTGACAGAATCTTaGTCTTCTCCTACAAGATTTTCCGCCACACAAGAG +
Preference number: 6 (lower is better)
Translates to: VGAKCTVRLTES*SSPTRFSATQE
Trigger: CTCTTGTGTGGCGGAAAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTCACTGTGCATTTTGCACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS TCA 72 bp GGATTATCCAGCTGGAGGCAGCCGTGGTACTCCGTGTaGTTGGTAACATGTATTTTAGTACAGATGTATTTG +
Preference number: 6 (lower is better)
Translates to: GLSSWRQPWYSV*LVTCILVQMYL
Trigger: CAAATACATCTGTACTAAAATACATGTTACCAATCACACGGAGTACCACGGCTGCCTCCAGCTGGATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp AATTGGGTATCTGCAGGTTTGCCAGGGGAATATTCTTaGTGCTTTCATTCAGGCAGTACAAATCCTGAGTGT +
Preference number: 6 (lower is better)
Translates to: NWVSAGLPGEYS*CFHSGSTNPEC
Trigger: ACACTCAGGATTTGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp TCTTCTCCTACAAGATTTTCCGCCACACAAGAGATCTaGTTCCCACTGTCATCGGATGAAATGTTAGTTATC +
Preference number: 6 (lower is better)
Translates to: SSPTRFSATQEI*FPLSSDEMLVI
Trigger: GATAACTAACATTTCATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGCGGAAAATCTTGTAGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 72 bp AGTTGGTGCAAAATGCACAGTGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATTTTCCGCCACACAAGA +
Preference number: 6 (lower is better)
Translates to: SWCKMHSEVDRI*IFSYKIFRHTR
Trigger: TCTTGTGTGGCGGAAAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTCACTGTGCATTTTGCACCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CAA 90 bp AAATGTGATAGTTGGTGCAAAATGCACAGTGAGGTTGACAGAATCTaGATCTTCTCCTACAAGATTTTCCGCCACACAAGAGATCTGCTT +
Preference number: 6 (lower is better)
Translates to: KCDSWCKMHSEVDRI*IFSYKIFRHTRDLL
Trigger: AAGCAGATCTCTTGTGTGGCGGAAAATCTTGTAGGAGAAGATCAAGATTCTGTCAACCTCACTGTGCATTTTGCACCAACTATCACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp TATTTTAGTACAGATGTATTTGGACTCATTCAATATTaGCCCGTTATAGAACCACTGAAGCGCTGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: YFSTDVFGLIQY*PVIEPLKRWFG
Trigger: CCCAAACCAGCGCTTCAGTGGTTCTATAACGGGGCAATATTGAATGAGTCCAAATACATCTGTACTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS GCA 72 bp ATTACTTCTGTTCGTGGTGTCCCCGATGTCATTCGCTaGAGTTCCATAATCTTCATAAATTACATCAGGATA +
Preference number: 6 (lower is better)
Translates to: ITSVRGVPDVIR*SSIIFINYIRI
Trigger: TATCCTGATGTAATTTATGAAGATTATGGAACTGCAGCGAATGACATCGGGGACACCACGAACAGAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6
CDS CCA 72 bp TCAACATCATCTTCGTTGATGATTTCTAACCTTTTCTaGTTTGCGATGAAAATTTCGGTGATGTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: STSSSLMISNLF*FAMKISVMFSG
Trigger: TCCTGAGAACATCACCGAAATTTTCATCGCAAACCAGAAAAGGTTAGAAATCATCAACGAAGATGATGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277120.8
ENST00000304053.10
ENST00000323115.10
ENST00000359847.4
ENST00000376208.6
ENST00000376213.6
ENST00000395882.6