Pregenerated sensors for NTN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000162068

Ensembl transcript IDs: ENST00000293973.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CGGCGGGCTCAGGCGGCGCTGCAGCGCCCCCGCCGTTCGCGTCGCTaGAGCCTCCGCAGGCGCCGCGTCCACGCGTCCCTCCAGGGTAGC	+
Preference number: 5 (lower is better) Translates to: RRAQAALQRPRRSRR*SLRRRRVHASLQGS Trigger: GCTACCCTGGAGGGACGCGTGGACGCGGCGCCTGCGGAGGCTGCAGCGACGCGAACGGCGGGGGCGCTGCAGCGCCGCCTGAGCCCGCCG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS TCA 90 bp	CAGCAGCGGGGATGTTGGCGCGTCCTCCCGCTGGGCCTAGAGCGATaGCAGGCGTCGCCCCCGCTCCCGGTGCCTCCGCCCGCGGAGGCC	+
Preference number: 5 (lower is better) Translates to: QQRGCWRVLPLGLER*QASPPLPVPPPAEA Trigger: GGCCTCCGCGGGCGGAGGCACCGGGAGCGGGGGCGACGCCTGTCATCGCTCTAGGCCCAGCGGGAGGACGCGCCAACATCCCCGCTGCTG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 90 bp	GGTCGGAGGCGTCGCAGGCCCGAGTGGCCGGCCGCCCGCACGTGCTaGAAGCCAGCACCTCGCGGCCCAGGGCGGCGTTCACCAGTCCTG	+
Preference number: 5 (lower is better) Translates to: GRRRRRPEWPAARTC*KPAPRGPGRRSPVL Trigger: CAGGACTGGTGAACGCCGCCCTGGGCCGCGAGGTGCTGGCTTCCAGCACGTGCGGGCGGCCGGCCACTCGGGCCTGCGACGCCTCCGACC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 90 bp	AGGCAGGGACTCCGAGCGCCAGCACAGAGGGCTGGCCGTGCCCCCTaGGGAAGTAAGGAGGGCGGGGGAGTGTGCCCGTCGCGGGTCGGA	+
Preference number: 5 (lower is better) Translates to: RQGLRAPAQRAGRAP*GSKEGGGVCPSRVG Trigger: TCCGACCCGCGACGGGCACACTCCCCCGCCCTCCTTACTTCCCCAGGGGGCACGGCCAGCCCTCTGTGCTGGCGCTCGGAGTCCCTGCCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS GCA 90 bp	CCCGGGCAGTGGCCCGCTGCCATGGCCTGTCGCAGTAGAAGGGCTTaGAGCGGCCGCAGTCAGGGCCCTCGGTGCCATGCCGACAGTCGC	+
Preference number: 5 (lower is better) Translates to: PGQWPAAMACRSRRA*SGRSQGPRCHADSR Trigger: GCGACTGTCGGCATGGCACCGAGGGCCCTGACTGCGGCCGCTGCAAGCCCTTCTACTGCGACAGGCCATGGCAGCGGGCCACTGCCCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 90 bp	AGCCGCTGCGGGTCAGCCAGTGGCCGGGCCCCAAGACGCTGCCCTTaGGGAAAAGAAGCCCTCTCCGCGGCTCTGCCCACCAGGCCCGCA	+
Preference number: 5 (lower is better) Translates to: SRCGSASGRAPRRCP*GKEALSAALPTRPA Trigger: TGCGGGCCTGGTGGGCAGAGCCGCGGAGAGGGCTTCTTTTCCCCAAGGGCAGCGTCTTGGGGCCCGGCCACTGGCTGACCCGCAGCGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS TCA 90 bp	TGGGAGGAGAAGAAGCCCAGCGGGGCCCAGCTGCGGCCATGGTCCTaGGACTTGAGCAGGGCCACGGAGGCTGGGGGAGCTGAGCAGAAG	+
Preference number: 5 (lower is better) Translates to: WEEKKPSGAQLRPWS*DLSRATEAGGAEQK Trigger: CTTCTGCTCAGCTCCCCCAGCCTCCGTGGCCCTGCTCAAGTCTCAGGACCATGGCCGCAGCTGGGCCCCGCTGGGCTTCTTCTCCTCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 90 bp	CCGCAGTCAGGGCCCTCGGTGCCATGCCGACAGTCGCAGATCAGGTaGCCCTGTGTGTCCAGCAGGCACCGTGAGGCATGTCCATTGCAC	+
Preference number: 5 (lower is better) Translates to: PQSGPSVPCRQSQIR*PCVSSRHREACPLH Trigger: GTGCAATGGACATGCCTCACGGTGCCTGCTGGACACACAGGGCCACCTGATCTGCGACTGTCGGCATGGCACCGAGGGCCCTGACTGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS TCA 90 bp	CCGCCACCTGCACCGCATAGTCCTTCTTGCAGAACTTCTTTAGGCTaGTGCGGTAGCTGCCACGGGCAGGTTTGCAGTGCGAGTCACAGT	+
Preference number: 5 (lower is better) Translates to: PPPAPHSPSCRTSLG*CGSCHGQVCSASHS Trigger: ACTGTGACTCGCACTGCAAACCTGCCCGTGGCAGCTACCGCATCAGCCTAAAGAAGTTCTGCAAGAAGGACTATGCGGTGCAGGTGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS GCA 72 bp	TGGCCCGCTGCCATGGCCTGTCGCAGTAGAAGGGCTTaGAGCGGCCGCAGTCAGGGCCCTCGGTGCCATGCC	+
Preference number: 6 (lower is better) Translates to: WPAAMACRSRRA*SGRSQGPRCHA Trigger: GGCATGGCACCGAGGGCCCTGACTGCGGCCGCTGCAAGCCCTTCTACTGCGACAGGCCATGGCAGCGGGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 72 bp	GGGTCAGCCAGTGGCCGGGCCCCAAGACGCTGCCCTTaGGGAAAAGAAGCCCTCTCCGCGGCTCTGCCCACC	+
Preference number: 6 (lower is better) Translates to: GSASGRAPRRCP*GKEALSAALPT Trigger: GGTGGGCAGAGCCGCGGAGAGGGCTTCTTTTCCCCAAGGGCAGCGTCTTGGGGCCCGGCCACTGGCTGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS TCA 72 bp	AAGAAGCCCAGCGGGGCCCAGCTGCGGCCATGGTCCTaGGACTTGAGCAGGGCCACGGAGGCTGGGGGAGCT	+
Preference number: 6 (lower is better) Translates to: KKPSGAQLRPWS*DLSRATEAGGA Trigger: AGCTCCCCCAGCCTCCGTGGCCCTGCTCAAGTCTCAGGACCATGGCCGCAGCTGGGCCCCGCTGGGCTTCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS GCA 72 bp	GGCTTGCAGCGGCCGCAGTCAGGGCCCTCGGTGCCATaGCGACAGTCGCAGATCAGGTGGCCCTGTGTGTCC	+
Preference number: 6 (lower is better) Translates to: GLQRPQSGPSVP*RQSQIRWPCVS Trigger: GGACACACAGGGCCACCTGATCTGCGACTGTCGGCATGGCACCGAGGGCCCTGACTGCGGCCGCTGCAAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 72 bp	AGGAGCAAGCGAGGCAGGCGTGGGATTCCCGGGCAGTaGCCCGCTGCCATGGCCTGTCGCAGTAGAAGGGCT	+
Preference number: 6 (lower is better) Translates to: RSKRGRRGIPGQ*PAAMACRSRRA Trigger: AGCCCTTCTACTGCGACAGGCCATGGCAGCGGGCCACTGCCCGGGAATCCCACGCCTGCCTCGCTTGCTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 72 bp	GGGTCCAGGGATAGGGGTCTTAACACAGGGCGCCACTaGGGAGCGGCTTTGCTGGAAGCCAGGCGCGCAGCG	+
Preference number: 6 (lower is better) Translates to: GSRDRGLNTGRH*GAALLEARRAA Trigger: CGCTGCGCGCCTGGCTTCCAGCAAAGCCGCTCCCCAGTGGCGCCCTGTGTTAAGACCCCTATCCCTGGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS CCA 72 bp	GGGCCCTCGGTGCCATGCCGACAGTCGCAGATCAGGTaGCCCTGTGTGTCCAGCAGGCACCGTGAGGCATGT	+
Preference number: 6 (lower is better) Translates to: GPSVPCRQSQIR*PCVSSRHREAC Trigger: ACATGCCTCACGGTGCCTGCTGGACACACAGGGCCACCTGATCTGCGACTGTCGGCATGGCACCGAGGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2
CDS TCA 72 bp	GCACCGCATAGTCCTTCTTGCAGAACTTCTTTAGGCTaGTGCGGTAGCTGCCACGGGCAGGTTTGCAGTGCG	+
Preference number: 6 (lower is better) Translates to: APHSPSCRTSLG*CGSCHGQVCSA Trigger: CGCACTGCAAACCTGCCCGTGGCAGCTACCGCATCAGCCTAAAGAAGTTCTGCAAGAAGGACTATGCGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293973.2