Pregenerated sensors for NSRP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000126653Ensembl transcript IDs: ENST00000247026.10, ENST00000394826.8, ENST00000467446.6, ENST00000479218.6, ENST00000540900.7, ENST00000577289.6, ENST00000580103.6, ENST00000581048.5, ENST00000585881.5, ENST00000612959.4
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTATTTTCATATCTTTCCTTCCTTACTTTCATATGCTCTTCCTTTaGTTTGCTTTTCTCTTCCTTCTCTCCTTTCTCACTGGGTCGGTT | + |
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Preference number: 1 (lower is better) Translates to: IIFISFLPYFHMLFL*FAFLFLLSFLTGSV Trigger: AACCGACCCAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGTAAGGAAGGAAAGATATGAAAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394826.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAAGCCTCTCGAACAGCTaGGACTACAGGCATGGACTA | + |
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Preference number: 2 (lower is better) Translates to: LECSGMIIPHCNIKFLGSSLSNS*DYRHGL Trigger: TAGTCCATGCCTGTAGTCCCAGCTGTTCGAGAGGCT...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATGCCTAGGCTGGTCTTaGATGCCTAGCCTCAATATC | + |
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Preference number: 2 (lower is better) Translates to: LECSGMIIPHCNIKFLGSCLGWS*MPSLNI Trigger: GATATTGAGGCTAGGCATTCAAGACCAGCCTAGGCA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCACTGGGACTACAGGCATaGACTACCATGCTAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LECSGMIIPHCNIKFLGSLGLQA*TTMLGF Trigger: AAAGCCTAGCATGGTAGTCCATGCCTGTAGTCCCAG...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAGCCTCAATATCCTTCTaGCTTGGCCTCCCAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LECSGMIIPHCNIKFLGSASISF*LGLPKC Trigger: ACATTTTGGGAGGCCAAGGCAGAAGGATATTGAGGC...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAGGCCTCCCAAAATGTTaGTATTACAGGCACGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LECSGMIIPHCNIKFLGSGLPKC*YYRHEL Trigger: TAGCTCGTGCCTGTAATACCAACATTTTGGGAGGCC...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAAATATCCTTCTGCCTTaGCCTCCCAAAATGTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LECSGMIIPHCNIKFLGSNILLP*PPKMLV Trigger: TACCAACATTTTGGGAGGCCAAGGCAGAAGGATATT...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAACTCTTAACGGTTCTTaGATACAACAAAGAATGTGG | + |
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Preference number: 2 (lower is better) Translates to: LECSGMIIPHCNIKFLGSTLNGS*IQQRMW Trigger: CCACATTCTTTGTTGTATTCAAGAACCGTTAAGAGT...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR TCA 72 bp | AGAGGCGTGCTTCGGCCTGGGAGGTTGAGGCTGCCATaGGTTGTGACTGCACAAATTGCACTCCATCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RGVLRPGRLRLP*VVTAQIALHPG Trigger: CCCAGGATGGAGTGCAATTTGTGCAGTCACAACTCATGGCAGCCTCAACCTCCCAGGCCGAAGCACGCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479218.6 |
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| 3UTR GCA 72 bp | TCGGCCTGGGAGGTTGAGGCTGCCATGAGTTGTGACTaGACAAATTGCACTCCATCCTGGGTGAAAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SAWEVEAAMSCD*TNCTPSWVKEQ Trigger: TTGCTCTTTCACCCAGGATGGAGTGCAATTTGTGCAGTCACAACTCATGGCAGCCTCAACCTCCCAGGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479218.6 |
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| 3UTR TCA 72 bp | AGAGACAAGGTCTTATTATCCTGCCTAGGCTGGTCTTaGATGCCTAGCCTCAATATCCTTCTGCCTTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: RDKVLLSCLGWS*MPSLNILLPWP Trigger: AGGCCAAGGCAGAAGGATATTGAGGCTAGGCATTCAAGACCAGCCTAGGCAGGATAATAAGACCTTGTCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| 3UTR-3UTR CAA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCACAATATCCTTCTGCCTaGGCCTCCCAAAATGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LECSGMIIPHCNIKFLGSQYPSA*ASQNVG Trigger: ACCAACATTTTGGGAGGCCAAGGCAGAAGGATATTG...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR GCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCACTCACAGAGGTTGCCTaGCCGGAATCGCCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSLTEVA*PESPSC Trigger: GCAAGATGGCGATTCCGGGCAGGCAACCTCTGTGAG...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612959.4 |
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| CDS-3UTR TCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCACTTGCCCTTCCTCTGTaGGTCTGTGTTTTGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSLALPL*VCVLLP Trigger: TGGGAGCAAAACACAGACTCACAGAGGAAGGGCAAG...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR TCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAATTCCTAGGCTCAAGTaGTCTTCTTGCCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSIPRLK*SSCLSL Trigger: GAGGCTGAGGCAAGAAGATCACTTGAGCCTAGGAAT...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR GCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAGGTTACATCCAAACATaGTTCCAGTGCAGCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSGYIQT*FQCSSP Trigger: AGGGCTGCTGCACTGGAAGCATGTTTGGATGTAACC...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR GCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATTGCCCAGGTTGGAGTaGAGTGGCATGATCATACCT | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSLPRLE*SGMIIP Trigger: AGGTATGATCATGCCACTGCACTCCAACCTGGGCAA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR GCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCACTCAATATAGGTCTTTaGATTAACCCGCGCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSLNIGL*INPRHL Trigger: CAGATGGCGCGGGTTAATGCAAAGACCTATATTGAG...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATCTGGATTTCCAGTTTaGTCTGTTTCATGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSSGFPV*SVSWPA Trigger: AGCAGGCCATGAAACAGACCAAACTGGAAATCCAGA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR GCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAAACACTGATGGTTTTTaGAAAACAGGGTGCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSNTDGF*KTGCNC Trigger: GCAGTTGCACCCTGTTTTGCAAAAACCATCAGTGTT...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000247026.10 |
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| CDS-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCACCTTTATACCAGATCTaGCTTCACGAAAGCTGCATT | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSPLYQI*LHESCI Trigger: AATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGG...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATCTCTCCTTTCTCACTaGGTCGGTTCTGATCATTTT | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSSLLSH*VGSDHF Trigger: AAAATGATCAGAACCGACCCAGTGAGAAAGGAGAGA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR CCA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAAGTTGTGAATATACTTaGGCTTTCTGTCTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LECSGMIIPHCNIKFLGSSCEYT*AFCLSP Trigger: TGGGGAAAGACAGAAAGCCCAAGTATATTCACAACT...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS TCA 90 bp | AGGCCCTCTAAGGAAGCCAGGAACTGTCTCTCTTCACACTGCCCCTaGGAGCATCCAAGCGGGGAGAAACTCAAGCGCGGGTTAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RPSKEARNCLSSHCP*EHPSGEKLKRGLGS Trigger: GCTTCCTAACCCGCGCTTGAGTTTCTCCCCGCTTGGATGCTCTCAGGGGCAGTGTGAAGAGAGACAGTTCCTGGCTTCCTTAGAGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467446.6 ENST00000585881.5 |
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| CDS CCA 90 bp | CGCGCGGCTTTGGGTGGCCCGGATCCTGCTTGTCGGTTGAATCGCTaGTTTGAGTCACTTCTATGGTACTGGGAATCGGATCCAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: RAALGGPDPACRLNR*FESLLWYWESDPVT Trigger: GGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGGGCCACCCAAAGCCGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS TCA 90 bp | GGCTTTGGGTGGCCCGGATCCTGCTTGTCGGTTGAATCGCTGGTTTaGGTCACTTCTATGGTACTGGGAATCGGATCCAGTGACCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GFGWPGSCLSVESLV*VTSMVLGIGSSDLC Trigger: ACAGAGGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGGGCCACCCAAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS CCA 90 bp | CCTGCTTGTCGGTTGAATCGCTGGTTTGAGTCACTTCTATGGTACTaGGAATCGGATCCAGTGACCTCTGTTTTGTTTCGGAGCCCACCG | + |
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Preference number: 5 (lower is better) Translates to: PACRLNRWFESLLWY*ESDPVTSVLFRSPP Trigger: CGGTGGGCTCCGAAACAAAACAGAGGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS-3UTR CAA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCACCCGGAATCGCCATCTaGCTCCCGTGTCCGCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: LECSGMIIPHCNIKFLGSPGIAI*LPCPLN Trigger: GTTCAGCGGACACGGGAGCAAGATGGCGATTCCGGG...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS CCA 90 bp | CCGGATCCTGCTTGTCGGTTGAATCGCTGGTTTGAGTCACTTCTATaGTACTGGGAATCGGATCCAGTGACCTCTGTTTTGTTTCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PDPACRLNRWFESLL*YWESDPVTSVLFRS Trigger: GCTCCGAAACAAAACAGAGGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS TCA 90 bp | ATCGCTGGTTTGAGTCACTTCTATGGTACTGGGAATCGGATCCAGTaGCCTCTGTTTTGTTTCGGAGCCCACCGGCTGCCTCAAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: IAGLSHFYGTGNRIQ*PLFCFGAHRLPQNL Trigger: AAGATTTTGAGGCAGCCGGTGGGCTCCGAAACAAAACAGAGGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS-3UTR CAA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATTTCACTCACAGAGGTaGCCTGCCCGGAATCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LECSGMIIPHCNIKFLGSFHSQR*PARNRH Trigger: ATGGCGATTCCGGGCAGGCAACCTCTGTGAGTGAAA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612959.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCAGCTCAAGTGATCTTCTaGCCTCAGCCTCTCGAACAG | + |
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Preference number: 5 (lower is better) Translates to: LECSGMIIPHCNIKFLGSAQVIF*PQPLEQ Trigger: CTGTTCGAGAGGCTGAGGCAAGAAGATCACTTGAGC...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATTCTGGATTTCCAGTTaGGTCTGTTTCATGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LECSGMIIPHCNIKFLGSFWISS*VCFMAC Trigger: GCAGGCCATGAAACAGACCAAACTGGAAATCCAGAA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATCATATGCTCTTCCTTaGCTTTGCTTTTCTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LECSGMIIPHCNIKFLGSSYALP*LCFSLP Trigger: AGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGTGCAGTGGCATGATCATACCTCACTGTAACATCAAATTCCTAGGCTCATCTTGGTTTCTTTCTTaGTCCTTTGCCATGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LECSGMIIPHCNIKFLGSSWFLS*SFAMFL Trigger: GAGAAACATGGCAAAGGACAAAGAAAGAAACCAAGA...TGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247026.10 ENST00000612959.4 |
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| CDS GCA 72 bp | GATCAGCGTGGCCAACCTGATGAAGCCCCGTCTCTATaGCTGCCCGGAATCGCCATCTTGCTCCCGTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: DQRGQPDEAPSL*LPGIAILLPCP Trigger: CGGACACGGGAGCAAGATGGCGATTCCGGGCAGGCATAGAGACGGGGCTTCATCAGGTTGGCCACGCTGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577289.6 |
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| CDS CCA 72 bp | CCGATGTCGTCACGTAAACTCTCGCGCGGCTTTGGGTaGCCCGGATCCTGCTTGTCGGTTGAATCGCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: PMSSRKLSRGFG*PGSCLSVESLV Trigger: AACCAGCGATTCAACCGACAAGCAGGATCCGGGCCACCCAAAGCCGCGCGAGAGTTTACGTGACGACATCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS TCA 72 bp | GCGCGGCTTTGGGTGGCCCGGATCCTGCTTGTCGGTTaGATCGCTGGTTTGAGTCACTTCTATGGTACTGGG | + |
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Preference number: 6 (lower is better) Translates to: ARLWVARILLVG*IAGLSHFYGTG Trigger: CCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGGGCCACCCAAAGCCGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS CAA 72 bp | CGCGCGGCTTTGGGTGGCCCGGATCCTGCTTGTCGGTaGAATCGCTGGTTTGAGTCACTTCTATGGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: RAALGGPDPACR*NRWFESLLWYW Trigger: CCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGGGCCACCCAAAGCCGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS GCA 72 bp | ACGAGAAGGAAGGGCGGGAATCAGGACTTGAGCTTCTaGCAAGGAGAACAAGGCCCTCTAAGGAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: TRRKGGNQDLSF*QGEQGPLRKPG Trigger: TCCTGGCTTCCTTAGAGGGCCTTGTTCTCCTTGGCAGAAGCTCAAGTCCTGATTCCCGCCCTTCCTTCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000467446.6 ENST00000580103.6 ENST00000585881.5 |
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| CDS CAA 90 bp | GTAAACTCTCGCGCGGCTTTGGGTGGCCCGGATCCTGCTTGTCGGTaGAATCGCTGGTTTGAGTCACTTCTATGGTACTGGGAATCGGAT | + |
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Preference number: 6 (lower is better) Translates to: VNSRAALGGPDPACR*NRWFESLLWYWESD Trigger: ATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGGGCCACCCAAAGCCGCGCGAGAGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS TCA 72 bp | TTGAGTCACTTCTATGGTACTGGGAATCGGATCCAGTaGCCTCTGTTTTGTTTCGGAGCCCACCGGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSHFYGTGNRIQ*PLFCFGAHRLP Trigger: AGGCAGCCGGTGGGCTCCGAAACAAAACAGAGGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS TCA 72 bp | TGGCCCGGATCCTGCTTGTCGGTTGAATCGCTGGTTTaGGTCACTTCTATGGTACTGGGAATCGGATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: WPGSCLSVESLV*VTSMVLGIGSS Trigger: ACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS CCA 72 bp | TTGGGTGGCCCGGATCCTGCTTGTCGGTTGAATCGCTaGTTTGAGTCACTTCTATGGTACTGGGAATCGGAT | + |
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Preference number: 6 (lower is better) Translates to: LGGPDPACRLNR*FESLLWYWESD Trigger: ATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGCAGGATCCGGGCCACCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS CCA 72 bp | GGCTTTCACTCACAGAGGTCTTGGCCTCTGAGTAGCTaGGACTACGGGTATGTACCACTACACACAGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: GFHSQRSWPLSS*DYGYVPLHTGN Trigger: ATTACCTGTGTGTAGTGGTACATACCCGTAGTCCCAGCTACTCAGAGGCCAAGACCTCTGTGAGTGAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581048.5 |
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| CDS CAA 72 bp | CTATGGTACTGGGAATCGGATCCAGTGACCTCTGTTTaGTTTCGGAGCCCACCGGCTGCCTCAAAATCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LWYWESDPVTSV*FRSPPAASKSF Trigger: AAAAGATTTTGAGGCAGCCGGTGGGCTCCGAAACAAAACAGAGGTCACTGGATCCGATTCCCAGTACCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS CCA 72 bp | CGGTTGAATCGCTGGTTTGAGTCACTTCTATGGTACTaGGAATCGGATCCAGTGACCTCTGTTTTGTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: RLNRWFESLLWY*ESDPVTSVLFR Trigger: CCGAAACAAAACAGAGGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS CCA 72 bp | GCTTGTCGGTTGAATCGCTGGTTTGAGTCACTTCTATaGTACTGGGAATCGGATCCAGTGACCTCTGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: ACRLNRWFESLL*YWESDPVTSVL Trigger: CAAAACAGAGGTCACTGGATCCGATTCCCAGTACCATAGAAGTGACTCAAACCAGCGATTCAACCGACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540900.7 |
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| CDS TCA 72 bp | AAGCATTTCAGAAAGGGATACTCAACCTCTTCCACATaGAGCTACCAAATCAAAACATGTCATAAGCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: KHFRKGYSTSST*SYQIKTCHKLY Trigger: ATAAAGCTTATGACATGTTTTGATTTGGTAGCTTCATGTGGAAGAGGTTGAGTATCCCTTTCTGAAATGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581048.5 |
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