RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSF (Homo sapiens)

Ensembl gene IDs: ENSG00000073969

Ensembl transcript IDs: ENST00000398238.8, ENST00000465370.1, ENST00000575068.5, ENST00000576346.5, ENST00000611398.3, ENST00000620290.2, ENST00000628495.1, ENST00000628506.2, ENST00000631254.2, ENST00000632125.1, ENST00000632862.1, ENST00000633902.1

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTGTaGGGTAAGCACCTTAGGATGGCTTCTAATTGCTTGTCCTTGCAT +
Preference number: 1 (lower is better)
Translates to: PHPSATVATSLMGGV*GKHLRMASNCLSLH
Trigger: ATGCAAGGACAAGCAATTAGAAGCCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 90 bp ACGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTaGGCAAGAAGGAATCACTTTAGCCTGCATGGGAAGGTAAGCGCA +
Preference number: 1 (lower is better)
Translates to: TCSVHKYWMVPTQRD*ARRNHFSLHGKVSA
Trigger: TGCGCTTACCTTCCCATGCAGGCTAAAGTGATTCCTTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 90 bp TGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATaGCTTCTAATTGCTTGTCCTTGCATTTTAAGCAGCAGTTGGGAG +
Preference number: 1 (lower is better)
Translates to: WPQASWVACEVSTLG*LLIACPCILSSSWE
Trigger: CTCCCAACTGCTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 90 bp CCAGTGACTTTTAGTGTTAGCTCAGGACAGCTGTCAGAGGATCTCTaGCCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGT +
Preference number: 1 (lower is better)
Translates to: PVTFSVSSGQLSEDL*PTPRFTKPDLHVES
Trigger: ACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGGCCAGAGATCCTCTGACAGCTGTCCTGAGCTAACACTAAAAGTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 90 bp CTTCTAATCGGCCAACTGTTGTCATGCAACATTCATGACACTGACTaGGAGTTTTCAAGGGTGATGGTGCTAGTAGAGAGGTTGAAACGT +
Preference number: 1 (lower is better)
Translates to: LLIGQLLSCNIHDTD*EFSRVMVLVERLKR
Trigger: ACGTTTCAACCTCTCTACTAGCACCATCACCCTTGAAAACTCTCAGTCAGTGTCATGAATGTTGCATGACAACAGTTGGCCGATTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 90 bp TTAGGATGGCTTCTAATTGCTTGTCCTTGCATTTTAAGCAGCAGTTaGGAGAGAGAGGCACACTCCATAAGTCTCATCACCAAATATGAC +
Preference number: 1 (lower is better)
Translates to: LGWLLIACPCILSSS*EREAHSISLITKYD
Trigger: GTCATATTTGGTGATGAGACTTATGGAGTGTGCCTCTCTCTCCCAACTGCTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCATCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 90 bp TGTAAGACAAATCACCCTCAAAAGGACTCAACGGGTGCTTCCTTTTaGAAGAAGTGTGTGGAGGGTAAAGGAAATGTGTTCAATGTATTG +
Preference number: 1 (lower is better)
Translates to: CKTNHPQKDSTGASF*KKCVEGKGNVFNVL
Trigger: CAATACATTGAACACATTTCCTTTACCCTCCACACACTTCTTCCAAAAGGAAGCACCCGTTGAGTCCTTTTGAGGGTGATTTGTCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 90 bp GAAAAAGCAGTGATACTAGTAAGCCTTAATATTATACTAAGGAATTaGCCCACTTGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTA +
Preference number: 1 (lower is better)
Translates to: EKAVILVSLNIILRN*PTWSWTLISAERFV
Trigger: TACAAACCTCTCAGCACTAATTAGTGTCCAACTCCAAGTGGGTCAATTCCTTAGTATAATATTAAGGCTTACTAGTATCACTGCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTCCCACCCAGAGGGACTaGGCAAGAAGGAATCACTTT +
Preference number: 2 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRPTQRD*ARRNHF
Trigger: AAAGTGATTCCTTCTTGCTCAGTCCCTCTGGGTGGG...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTTGGACAATAAAGGACTaGGGGAGAGGGCTAGAAAAT +
Preference number: 2 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRWTIKD*GRGLEN
Trigger: ATTTTCTAGCCCTCTCCCTCAGTCCTTTATTGTCCA...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGTGGACAATAAAGGACTaGGGGAGAGGGCTAGAAAAT +
Preference number: 2 (lower is better)
Translates to: PLWPQASWVACEVSTLGWWTIKD*GRGLEN
Trigger: ATTTTCTAGCCCTCTCCCTCAGTCCTTTATTGTCCA...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTGTAAGCACCTTAGGATaGCTTCTAATTGCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRVSTLG*LLIACP
Trigger: AGGACAAGCAATTAGAAGCCATCCTAAGGTGCTTAC...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGCATTCTAAACCAAATTaGCACCTTCCACGAGACACT +
Preference number: 2 (lower is better)
Translates to: PLWPQASWVACEVSTLGWHSKPN*HLPRDT
Trigger: AGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAATG...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR GCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTCTGTTTGGGGGTGTATaGTTTTTCCATACCTATCTT +
Preference number: 2 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRLFGGV*FFHTYL
Trigger: AAGATAGGTATGGAAAAAGCATACACCCCCAAACAG...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTGAGAGGGCTAGAAAATaGTTGATTTTTCTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRERARK*LIFLEN
Trigger: ATTCTCCAGAAAAATCAATCATTTTCTAGCCCTCTC...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR GCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAGGAGCCACACCCAAGTaGCACTGTGGCCACAAGCCT +
Preference number: 2 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKGATPK*HCGHKP
Trigger: AGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCC...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCCTGTCAGAGGATCTCTaGCCCACACCTCGATTTACT +
Preference number: 2 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSLSEDL*PTPRFT
Trigger: AGTAAATCGAGGTGTGGGCCAGAGATCCTCTGACAG...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR GCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAGGCCAACTGTTGTCATaGAACATTCATGACACTGAC +
Preference number: 2 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKGQLLS*NIHDTD
Trigger: GTCAGTGTCATGAATGTTGCATGACAACAGTTGGCC...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR GCA 90 bp CCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGTCTGCCTTCTAATGGCCAACTGTTGTCATaGAACATTCATGACACTGAC +
Preference number: 2 (lower is better)
Translates to: PTPRFTKPDLHVESLPSNGQLLS*NIHDTD
Trigger: GTCAGTGTCATGAATGTTGCATGACAACAGTTGGCC...ATTAGAAGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTTCCACAAGTACTGGATaGTTCCCACCCAGAGGGACT +
Preference number: 2 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCSTSTG*FPPRGT
Trigger: AGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGA...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTAGTGTCCACAAGTACTaGATGGTTCCCACCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SILEIQCLVSSGKENTSLSVHKY*MVPTQR
Trigger: CCTCTGGGTGGGAACCATCCAGTACTTGTGGACACT...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCATTCATGACACTGACTaGGAGTTTTCAAGGGTGATG +
Preference number: 2 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSIHDTD*EFSRVM
Trigger: CATCACCCTTGAAAACTCTCAGTCAGTGTCATGAAT...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAATTATACTAAGGAATTaGCCCACTTGGAGTTGGACA +
Preference number: 2 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKIILRN*PTWSWT
Trigger: TGTCCAACTCCAAGTGGGTCAATTCCTTAGTATAAT...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR GCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAACTGTTTGGGGGTGTATaGTTTTTCCATACCTATCTT +
Preference number: 2 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKLFGGV*FFHTYL
Trigger: AAGATAGGTATGGAAAAAGCATACACCCCCAAACAG...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAGAGAGGGCTAGAAAATaGTTGATTTTTCTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKERARK*LIFLEN
Trigger: ATTCTCCAGAAAAATCAATCATTTTCTAGCCCTCTC...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAAGAATACCAGTCTTGTaGGAGACCTTTAACCAAATA +
Preference number: 2 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKRIPVL*ETFNQI
Trigger: TATTTGGTTAAAGGTCTCCCACAAGACTGGTATTCT...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR GCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGGAAGGGAGTTTTATTaGACTAATCATGCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: SILEIQCLVSSGKENTSLGREFY*TNHAER
Trigger: TCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR TCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCATTCATGACACTGACTaGGAGTTTTCAAGGGTGATG +
Preference number: 2 (lower is better)
Translates to: WSWTLISAERFVNYFNNSIHDTD*EFSRVM
Trigger: CATCACCCTTGAAAACTCTCAGTCAGTGTCATGAAT...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTAACGGGTGCTTCCTTTaGGAAGAAGTGTGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRNGCFL*EEVCGG
Trigger: CCCTCCACACACTTCTTCCAAAAGGAAGCACCCGTT...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 72 bp AGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATaGGTGGCGTGTGAGGTAAGCACCTTAGGATGGCTT +
Preference number: 3 (lower is better)
Translates to: SHTQVPLWPQAS*VACEVSTLGWL
Trigger: AAGCCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTCAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCA +
Preference number: 3 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRQSEHM*KVENVP
Trigger: TGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTG...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGGTGCTAGTAGAGAGGTaGAAACGTGTAGTGTCCACA +
Preference number: 3 (lower is better)
Translates to: PLWPQASWVACEVSTLGWVLVER*KRVVST
Trigger: TGTGGACACTACACGTTTCAACCTCTCTACTAGCAC...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 72 bp AGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTGTaGGGTAAGCACCTTAGGATGGCTTCTAATTGCTTG +
Preference number: 3 (lower is better)
Translates to: SATVATSLMGGV*GKHLRMASNCL
Trigger: CAAGCAATTAGAAGCCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 72 bp GTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTaGGCAAGAAGGAATCACTTTAGCCTGCATGGGAAG +
Preference number: 3 (lower is better)
Translates to: VHKYWMVPTQRD*ARRNHFSLHGK
Trigger: CTTCCCATGCAGGCTAAAGTGATTCCTTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTTCTTCTGACTGCAACTaGAAAACATCTCTGACAATG +
Preference number: 3 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRSSDCN*KTSLTM
Trigger: CATTGTCAGAGATGTTTTCAAGTTGCAGTCAGAAGA...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGTCTTCTGACTGCAACTaGAAAACATCTCTGACAATG +
Preference number: 3 (lower is better)
Translates to: PLWPQASWVACEVSTLGWSSDCN*KTSLTM
Trigger: CATTGTCAGAGATGTTTTCAAGTTGCAGTCAGAAGA...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 72 bp GAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATaGTTCCCACCCAGAGGGACTGAGCAAGAAGGAATC +
Preference number: 3 (lower is better)
Translates to: ERLKRVVSTSTG*FPPRGTEQEGI
Trigger: GATTCCTTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 72 bp GCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATaGCTTCTAATTGCTTGTCCTTGCATTTTAAGCAGC +
Preference number: 3 (lower is better)
Translates to: ASWVACEVSTLG*LLIACPCILSS
Trigger: GCTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 72 bp GGCCAACTGTTGTCATGCAACATTCATGACACTGACTaGGAGTTTTCAAGGGTGATGGTGCTAGTAGAGAGG +
Preference number: 3 (lower is better)
Translates to: GQLLSCNIHDTD*EFSRVMVLVER
Trigger: CCTCTCTACTAGCACCATCACCCTTGAAAACTCTCAGTCAGTGTCATGAATGTTGCATGACAACAGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 72 bp TTTAGTGTTAGCTCAGGACAGCTGTCAGAGGATCTCTaGCCCACACCTCGATTTACTAAGCCAGATTTGCAT +
Preference number: 3 (lower is better)
Translates to: FSVSSGQLSEDL*PTPRFTKPDLH
Trigger: ATGCAAATCTGGCTTAGTAAATCGAGGTGTGGGCCAGAGATCCTCTGACAGCTGTCCTGAGCTAACACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 72 bp AAATGGCAAGATTTGGAGATGATCTGCTTTCTCACATaGGGACAAATAACAGAGGAGCCACACCCAAGTGCC +
Preference number: 3 (lower is better)
Translates to: KWQDLEMICFLT*GQITEEPHPSA
Trigger: GGCACTTGGGTGTGGCTCCTCTGTTATTTGTCCTCATGTGAGAAAGCAGATCATCTCCAAATCTTGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 72 bp AATCACCCTCAAAAGGACTCAACGGGTGCTTCCTTTTaGAAGAAGTGTGTGGAGGGTAAAGGAAATGTGTTC +
Preference number: 3 (lower is better)
Translates to: NHPQKDSTGASF*KKCVEGKGNVF
Trigger: GAACACATTTCCTTTACCCTCCACACACTTCTTCCAAAAGGAAGCACCCGTTGAGTCCTTTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CCA 72 bp CTTCTAATTGCTTGTCCTTGCATTTTAAGCAGCAGTTaGGAGAGAGAGGCACACTCCATAAGTCTCATCACC +
Preference number: 3 (lower is better)
Translates to: LLIACPCILSSS*EREAHSISLIT
Trigger: GGTGATGAGACTTATGGAGTGTGCCTCTCTCTCCCAACTGCTGCTTAAAATGCAAGGACAAGCAATTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATCAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCA +
Preference number: 3 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHQSEHM*KVENVP
Trigger: TGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTG...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
3UTR-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAACTAATCGGCCAACTGTaGTCATGCAACATTCATGAC +
Preference number: 3 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKLIGQL*SCNIHD
Trigger: GTCATGAATGTTGCATGACAACAGTTGGCCGATTAG...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAAAGAGAATACCAGTCTaGTGGGAGACCTTTAACCAA +
Preference number: 3 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKKRIPV*WETFNQ
Trigger: TTGGTTAAAGGTCTCCCACAAGACTGGTATTCTCTT...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR TCA 72 bp AAGAGACATAAGTTAACACAATGTGTGCTGCTTTCATaGGGAGGAAAGAGGCAAGATCTTAGAGGAATCCAG +
Preference number: 3 (lower is better)
Translates to: KRHKLTQCVLLS*GGKRQDLRGIQ
Trigger: CTGGATTCCTCTAAGATCTTGCCTCTTTCCTCCTCATGAAAGCAGCACACATTGTGTTAACTTATGTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCTTTACTAAGCCAGATTaGCATGTAGAAAGTCTGCCT +
Preference number: 3 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSFTKPD*HVESLP
Trigger: AGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAA...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAATATTATACTAAGGAATaGACCCACTTGGAGTTGGAC +
Preference number: 3 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKYYTKE*THLELD
Trigger: GTCCAACTCCAAGTGGGTCAATTCCTTAGTATAATA...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAATGGCTTCTAATTGCTaGTCCTTGCATTTTAAGCAG +
Preference number: 3 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKMASNC*SLHFKQ
Trigger: CTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCAT...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR-3UTR CAA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCTCTTCTGACTGCAACTaGAAAACATCTCTGACAATG +
Preference number: 3 (lower is better)
Translates to: WSWTLISAERFVNYFNNSSSDCN*KTSLTM
Trigger: CATTGTCAGAGATGTTTTCAAGTTGCAGTCAGAAGA...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTAGTGTCCACAAGTACTaGATGGTTCCCACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRSVHKY*MVPTQR
Trigger: CCTCTGGGTGGGAACCATCCAGTACTTGTGGACACT...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGTCCACAAGTACTGGATaGTTCCCACCCAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: PLWPQASWVACEVSTLGWSTSTG*FPPRGT
Trigger: AGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGA...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTAGGAATCCAGGATACTaGCCACCAGGAATCACAGGA +
Preference number: 4 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRRNPGY*PPGITG
Trigger: TCCTGTGATTCCTGGTGGCCAGTATCCTGGATTCCT...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAACTCCTGTGGCAATGTTaGGCACGTGGATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQELLWQC*ARGWWC
Trigger: GCACCACCATCCACGTGCCCAACATTGCCACAGGAG...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGACGGGTGCTTCCTTTTaGAAGAAGTGTGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLWPQASWVACEVSTLGWTGASF*KKCVEG
Trigger: ACCCTCCACACACTTCTTCCAAAAGGAAGCACCCGT...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAACTCATGGGTGGCGTGTaGGGTAAGCACCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQELMGGV*GKHLRM
Trigger: CATCCTAAGGTGCTTACCTCACACGCCACCCATGAG...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGAAAGCTTCCAACAGCTaGTCTCCTGTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: PLWPQASWVACEVSTLGWKASNS*SPVAML
Trigger: CAACATTGCCACAGGAGAGCAGCTGTTGGAAGCTTT...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTTTCTTCCCTTTGACTTaGTGTGCAATTGTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRFFPLT*CAIVVR
Trigger: ACGCACCACAATTGCACAGCAAGTCAAAGGGAAGAA...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTCTCACAATCACATGCTaGCCAGACTGGAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRLTITC*PDWKSF
Trigger: AAAGGATTTCCAGTCTGGCCAGCATGTGATTGTGAG...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTGGACATCTTGCCGCTTaGATGCTCCGGCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSGHLAA*MLRPAI
Trigger: GATGGCGGGCCGGAGCATGCAAGCGGCAAGATGTCC...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGCTCACAATCACATGCTaGCCAGACTGGAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: PLWPQASWVACEVSTLGWLTITC*PDWKSF
Trigger: AAAGGATTTCCAGTCTGGCCAGCATGTGATTGTGAG...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGTCGGCCTTTCTCATCTaGCAAGCCTATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: PLWPQASWVACEVSTLGWSAFLI*QAYLHF
Trigger: AAAATGGAGATAGGCTTGCCAGATGAGAAAGGCCGA...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTGCAGTCTTCCCACTGTaGGGAGGGCCTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSAVFPL*GGPSRS
Trigger: GCTTCTGGAAGGCCCTCCTCACAGTGGGAAGACTGC...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTGTTTGTGCCAAAGGCTaGTTTGATATCATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRVCAKG*FDIILQ
Trigger: TTGGAGAATGATATCAAACCAGCCTTTGGCACAAAC...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAAAAGCACGCTGACCAATaGTGTGCGGTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQEKHADQ*CAVTVL
Trigger: AAGAACAGTGACCGCACACCATTGGTCAGCGTGCTT...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTTTTGGAAGAAGTGTGTaGAGGGTAAAGGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRFGRSV*RVKEMC
Trigger: ACACATTTCCTTTACCCTCCACACACTTCTTCCAAA...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGCAGTCTTCCCACTGTaGGGAGGGCCTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRAVFPL*GGPSRS
Trigger: GCTTCTGGAAGGCCCTCCTCACAGTGGGAAGACTGC...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAGGACATCTTGCCGCTTaGATGCTCCGGCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGREGHLAA*MLRPAI
Trigger: GATGGCGGGCCGGAGCATGCAAGCGGCAAGATGTCC...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGGAGCCACACCCAAGTaGCACTGTGGCCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRGATPK*HCGHKP
Trigger: AGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCC...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTTGGCCACAAGCCTCATaGGTGGCGTGTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSWPQAS*VACEVS
Trigger: GCTTACCTCACACGCCACCCATGAGGCTTGTGGCCA...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCTGGCCACAAGCCTCATaGGTGGCGTGTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFWPQAS*VACEVS
Trigger: GCTTACCTCACACGCCACCCATGAGGCTTGTGGCCA...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAGCAGTCTTCCCACTGTaGGGAGGGCCTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGREAVFPL*GGPSRS
Trigger: GCTTCTGGAAGGCCCTCCTCACAGTGGGAAGACTGC...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTGCAGTCTTCCCACTGTaGGGAGGGCCTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERAVFPL*GGPSRS
Trigger: GCTTCTGGAAGGCCCTCCTCACAGTGGGAAGACTGC...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAATGGACAATAAAGGACTaGGGGAGAGGGCTAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQEWTIKD*GRGLEN
Trigger: ATTTTCTAGCCCTCTCCCTCAGTCCTTTATTGTCCA...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTACTCATGGGTGGCGTGTaGGGTAAGCACCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVLMGGV*GKHLRM
Trigger: CATCCTAAGGTGCTTACCTCACACGCCACCCATGAG...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAAGGCAAGATTTGGAGATaGTCTGCTTTCTCACATGAG +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQEGKIWR*SAFSHE
Trigger: CTCATGTGAGAAAGCAGATCATCTCCAAATCTTGCC...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAAGGCCAACTGTTGTCATaGAACATTCATGACACTGAC +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQEGQLLS*NIHDTD
Trigger: GTCAGTGTCATGAATGTTGCATGACAACAGTTGGCC...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCGGAGCCACACCCAAGTaGCACTGTGGCCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSGATPK*HCGHKP
Trigger: AGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCC...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCGCAATGTTGGGCACGTaGATGGTGGTGCTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFAMLGT*MVVLKA
Trigger: CGCTTTCAGCACCACCATCCACGTGCCCAACATTGC...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAGCAATGTTGGGCACGTaGATGGTGGTGCTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVAMLGT*MVVLKA
Trigger: CGCTTTCAGCACCACCATCCACGTGCCCAACATTGC...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGACTCCTGTGGCAATGTTaGGCACGTGGATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRLLWQC*ARGWWC
Trigger: GCACCACCATCCACGTGCCCAACATTGCCACAGGAG...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCCCCACCCAGAGGGACTaGGCAAGAAGGAATCACTTT +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFPTQRD*ARRNHF
Trigger: AAAGTGATTCCTTCTTGCTCAGTCCCTCTGGGTGGG...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGCAATGTTGGGCACGTaGATGGTGGTGCTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRAMLGT*MVVLKA
Trigger: CGCTTTCAGCACCACCATCCACGTGCCCAACATTGC...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTGCAATGTTGGGCACGTaGATGGTGGTGCTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLAMLGT*MVVLKA
Trigger: CGCTTTCAGCACCACCATCCACGTGCCCAACATTGC...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAACTCCTGTGGCAATGTTaGGCACGTGGATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKLLWQC*ARGWWC
Trigger: GCACCACCATCCACGTGCCCAACATTGCCACAGGAG...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACTCCTGTGGCAATGTTaGGCACGTGGATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGRELLWQC*ARGWWC
Trigger: GCACCACCATCCACGTGCCCAACATTGCCACAGGAG...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTCTCCTGTGGCAATGTTaGGCACGTGGATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERLLWQC*ARGWWC
Trigger: GCACCACCATCCACGTGCCCAACATTGCCACAGGAG...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCTCCACAAGTACTGGATaGTTCCCACCCAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFSTSTG*FPPRGT
Trigger: AGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGA...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAACCCAAGTGCCACTGTaGCCACAAGCCTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGRETQVPL*PQASWV
Trigger: CACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGT...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGTCTGCCTTCTAATACCCAAGTGCCACTGTaGCCACAAGCCTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: PTPRFTKPDLHVESLPSNTQVPL*PQASWV
Trigger: CACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGT...ATTAGAAGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATGCAGTCTTCCCACTGTaGGGAGGGCCTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHAVFPL*GGPSRS
Trigger: GCTTCTGGAAGGCCCTCCTCACAGTGGGAAGACTGC...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCACAACCACACAACTaGGCTGGGATTTGTACGCAT +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSPQPHN*AGICTH
Trigger: ATGCGTACAAATCCCAGCTCAGTTGTGTGGTTGTGG...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAAATTATACTAAGGAATTaGCCCACTTGGAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQEIILRN*PTWSWT
Trigger: TGTCCAACTCCAAGTGGGTCAATTCCTTAGTATAAT...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGGACATCTTGCCGCTTaGATGCTCCGGCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: SILEIQCLVSSGKENTSLGHLAA*MLRPAI
Trigger: GATGGCGGGCCGGAGCATGCAAGCGGCAAGATGTCC...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCTACTTCAATCTTCTaGCTTTTCCCTGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSPTSIF*LFPVAG
Trigger: GCCTGCGACAGGGAAAAGGCAGAAGATTGAAGTAGG...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAACTAATTGCTTGTCCTTaGATTTTAAGCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQELIACP*ILSSSW
Trigger: CCAACTGCTGCTTAAAATGCAAGGACAAGCAATTAG...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAGCAATGTTGGGCACGTaGATGGTGGTGCTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGREAMLGT*MVVLKA
Trigger: CGCTTTCAGCACCACCATCCACGTGCCCAACATTGC...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCCTGTCAGAGGATCTCTaGCCCACACCTCGATTTACT +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFLSEDL*PTPRFT
Trigger: AGTAAATCGAGGTGTGGGCCAGAGATCCTCTGACAG...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAATTTGGAAGAAGTGTGTaGAGGGTAAAGGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQEFGRSV*RVKEMC
Trigger: ACACATTTCCTTTACCCTCCACACACTTCTTCCAAA...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTACGGGTGCTTCCTTTTaGAAGAAGTGTGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSTGASF*KKCVEG
Trigger: ACCCTCCACACACTTCTTCCAAAAGGAAGCACCCGT...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTAGGAATCCAGGATACTaGCCACCAGGAATCACAGGA +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSRNPGY*PPGITG
Trigger: TCCTGTGATTCCTGGTGGCCAGTATCCTGGATTCCT...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATCTTCCAGAAGCACGCTaGCCAATGGTGTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHLPEAR*PMVCGH
Trigger: GTGACCGCACACCATTGGTCAGCGTGCTTCTGGAAG...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGCAGTCTTCCCACTGTaGGGAGGGCCTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SILEIQCLVSSGKENTSLAVFPL*GGPSRS
Trigger: GCTTCTGGAAGGCCCTCCTCACAGTGGGAAGACTGC...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGACCACAACCACACAACTaGGCTGGGATTTGTACGCAT +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRPQPHN*AGICTH
Trigger: ATGCGTACAAATCCCAGCTCAGTTGTGTGGTTGTGG...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAAGCATTTCCATCTCCTaGAGGACATCTTTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVSISIS*RTSLRL
Trigger: TAGCCGCAAAGATGTCCTTCAGGAGATGGAAATGCT...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTAGCATTTCCATCTCCTaGAGGACATCTTTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSSISIS*RTSLRL
Trigger: TAGCCGCAAAGATGTCCTTCAGGAGATGGAAATGCT...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTAGCATTTCCATCTCCTaGAGGACATCTTTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSSISIS*RTSLRL
Trigger: TAGCCGCAAAGATGTCCTTCAGGAGATGGAAATGCT...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTTGCGTTCCTTATCCTTaGAGTTGCCCAAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSCVPYP*SCPKAP
Trigger: TGGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCA...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCCCCACCCAGAGGGACTaGGCAAGAAGGAATCACTTT +
Preference number: 4 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSPTQRD*ARRNHF
Trigger: AAAGTGATTCCTTCTTGCTCAGTCCCTCTGGGTGGG...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAAAAGCTTCCAACAGCTaGTCTCCTGTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVKASNS*SPVAML
Trigger: CAACATTGCCACAGGAGAGCAGCTGTTGGAAGCTTT...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTAAAGCTTCCAACAGCTaGTCTCCTGTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSKASNS*SPVAML
Trigger: CAACATTGCCACAGGAGAGCAGCTGTTGGAAGCTTT...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAAAGGATGGCTTCTAATTaGTTGTCCTTGCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQERMASN*LSLHFK
Trigger: CTTAAAATGCAAGGACAAGCAATTAGAAGCCATCCT...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTCAGCATCCCTTCCTCTaGATTAAGAGCAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSQHPFL*IKSKPF
Trigger: GAAGGGTTTGCTCTTAATGCAGAGGAAGGGATGCTG...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCAGCATCCCTTCCTCTaGATTAAGAGCAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSQHPFL*IKSKPF
Trigger: GAAGGGTTTGCTCTTAATGCAGAGGAAGGGATGCTG...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp CCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGTCTGCCTTCTAATAGTGTCCACAAGTACTaGATGGTTCCCACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PTPRFTKPDLHVESLPSNSVHKY*MVPTQR
Trigger: CCTCTGGGTGGGAACCATCCAGTACTTGTGGACACT...ATTAGAAGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CAA 72 bp GGTAAGCACCTTAGGATGGCTTCTAATTGCTTGTCCTaGCATTTTAAGCAGCAGTTGGGAGAGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: GKHLRMASNCLS*HFKQQLGERGT
Trigger: TGTGCCTCTCTCTCCCAACTGCTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCATCCTAAGGTGCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGCCCATTTTCTCTaGGGTAAACTGAATGCAATG +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSPAHFL*GKLNAM
Trigger: CATTGCATTCAGTTTACCTCAGAGAAAATGGGCTGG...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAACCACAACCACACAACTaGGCTGGGATTTGTACGCAT +
Preference number: 4 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKPQPHN*AGICTH
Trigger: ATGCGTACAAATCCCAGCTCAGTTGTGTGGTTGTGG...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp CCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGTCTGCCTTCTAATCCACAACCACACAACTaGGCTGGGATTTGTACGCAT +
Preference number: 4 (lower is better)
Translates to: PTPRFTKPDLHVESLPSNPQPHN*AGICTH
Trigger: ATGCGTACAAATCCCAGCTCAGTTGTGTGGTTGTGG...ATTAGAAGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACCACAACCACACAACTaGGCTGGGATTTGTACGCAT +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGREPQPHN*AGICTH
Trigger: ATGCGTACAAATCCCAGCTCAGTTGTGTGGTTGTGG...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAAGCATTTCCATCTCCTaGAGGACATCTTTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRSISIS*RTSLRL
Trigger: TAGCCGCAAAGATGTCCTTCAGGAGATGGAAATGCT...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTTGCGTTCCTTATCCTTaGAGTTGCCCAAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLCVPYP*SCPKAP
Trigger: TGGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCA...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGATGCGTTCCTTATCCTTaGAGTTGCCCAAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRCVPYP*SCPKAP
Trigger: TGGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCA...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTTGGACAATAAAGGACTaGGGGAGAGGGCTAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSWTIKD*GRGLEN
Trigger: ATTTTCTAGCCCTCTCCCTCAGTCCTTTATTGTCCA...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAGGCAAGATTTGGAGATaGTCTGCTTTCTCACATGAG +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVGKIWR*SAFSHE
Trigger: CTCATGTGAGAAAGCAGATCATCTCCAAATCTTGCC...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTTGTGTGCTGCTTTCATaGGGAGGAAAGAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLCVLLS*GGKRQD
Trigger: ATCTTGCCTCTTTCCTCCTCATGAAAGCAGCACACA...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGATGTGTGCTGCTTTCATaGGGAGGAAAGAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRCVLLS*GGKRQD
Trigger: ATCTTGCCTCTTTCCTCCTCATGAAAGCAGCACACA...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACCTACTTCAATCTTCTaGCTTTTCCCTGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGREPTSIF*LFPVAG
Trigger: GCCTGCGACAGGGAAAAGGCAGAAGATTGAAGTAGG...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAAAAGCTTCCAACAGCTaGTCTCCTGTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRKASNS*SPVAML
Trigger: CAACATTGCCACAGGAGAGCAGCTGTTGGAAGCTTT...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAAAGCTTCCAACAGCTaGTCTCCTGTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLKASNS*SPVAML
Trigger: CAACATTGCCACAGGAGAGCAGCTGTTGGAAGCTTT...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTTTCTTCCCTTTGACTTaGTGTGCAATTGTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSFFPLT*CAIVVR
Trigger: ACGCACCACAATTGCACAGCAAGTCAAAGGGAAGAA...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAGGCCAACTGTTGTCATaGAACATTCATGACACTGAC +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVGQLLS*NIHDTD
Trigger: GTCAGTGTCATGAATGTTGCATGACAACAGTTGGCC...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTGGCCAACTGTTGTCATaGAACATTCATGACACTGAC +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSGQLLS*NIHDTD
Trigger: GTCAGTGTCATGAATGTTGCATGACAACAGTTGGCC...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCGGAGCCACACCCAAGTaGCACTGTGGCCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: WSWTLISAERFVNYFNNSGATPK*HCGHKP
Trigger: AGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCC...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTCAGCATCCCTTCCTCTaGATTAAGAGCAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLQHPFL*IKSKPF
Trigger: GAAGGGTTTGCTCTTAATGCAGAGGAAGGGATGCTG...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCTCACAATCACATGCTaGCCAGACTGGAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSLTITC*PDWKSF
Trigger: AAAGGATTTCCAGTCTGGCCAGCATGTGATTGTGAG...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCAAGCACGCTGACCAATaGTGTGCGGTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSKHADQ*CAVTVL
Trigger: AAGAACAGTGACCGCACACCATTGGTCAGCGTGCTT...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTAAGCACGCTGACCAATaGTGTGCGGTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERKHADQ*CAVTVL
Trigger: AAGAACAGTGACCGCACACCATTGGTCAGCGTGCTT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCACCACACAACTGAGCTaGGATTTGTACGCATCATCA +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFTTQLS*DLYASS
Trigger: TGATGATGCGTACAAATCCCAGCTCAGTTGTGTGGT...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTACCACACAACTGAGCTaGGATTTGTACGCATCATCA +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSTTQLS*DLYASS
Trigger: TGATGATGCGTACAAATCCCAGCTCAGTTGTGTGGT...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAACCACACAACTGAGCTaGGATTTGTACGCATCATCA +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVTTQLS*DLYASS
Trigger: TGATGATGCGTACAAATCCCAGCTCAGTTGTGTGGT...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp CCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGTCTGCCTTCTAATCTGTCAGAGGATCTCTaGCCCACACCTCGATTTACT +
Preference number: 4 (lower is better)
Translates to: PTPRFTKPDLHVESLPSNLSEDL*PTPRFT
Trigger: AGTAAATCGAGGTGTGGGCCAGAGATCCTCTGACAG...ATTAGAAGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGTCTGCCTTCTAATACGGGTGCTTCCTTTTaGAAGAAGTGTGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PTPRFTKPDLHVESLPSNTGASF*KKCVEG
Trigger: ACCCTCCACACACTTCTTCCAAAAGGAAGCACCCGT...ATTAGAAGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTTGGCCACAAGCCTCATaGGTGGCGTGTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCWPQAS*VACEVS
Trigger: GCTTACCTCACACGCCACCCATGAGGCTTGTGGCCA...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAACCAAAAGTATACAAATaGCAAGATTTGGAGATGATC +
Preference number: 4 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQEPKVYK*QDLEMI
Trigger: GATCATCTCCAAATCTTGCCATTTGTATACTTTTGG...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGACCAGCCCATTTTCTCTaGGGTAAACTGAATGCAATG +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRPAHFL*GKLNAM
Trigger: CATTGCATTCAGTTTACCTCAGAGAAAATGGGCTGG...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTATCTTCTTCATGGCCTaGCATTTGGCTGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSIFFMA*HLAVSE
Trigger: TTCTGAAACAGCCAAATGTCAGGCCATGAAGAAGAT...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTAGCATTTCCATCTCCTaGAGGACATCTTTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERSISIS*RTSLRL
Trigger: TAGCCGCAAAGATGTCCTTCAGGAGATGGAAATGCT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTCATTCTAAACCAAATTaGCACCTTCCACGAGACACT +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSHSKPN*HLPRDT
Trigger: AGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAATG...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTACATTCTAAACCAAATTaGCACCTTCCACGAGACACT +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVHSKPN*HLPRDT
Trigger: AGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAATG...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAATTCATGACACTGACTaGGAGTTTTCAAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVIHDTD*EFSRVM
Trigger: CATCACCCTTGAAAACTCTCAGTCAGTGTCATGAAT...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTATCTGCTTTCTCACATaGGGACAAATAACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSICFLT*GQITEE
Trigger: CTCCTCTGTTATTTGTCCTCATGTGAGAAAGCAGAT...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCTGTGTGCTGCTTTCATaGGGAGGAAAGAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSCVLLS*GGKRQD
Trigger: ATCTTGCCTCTTTCCTCCTCATGAAAGCAGCACACA...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCGGAAGGGAGTTTTATTaGACTAATCATGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFGREFY*TNHAER
Trigger: TCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAGGAAGGGAGTTTTATTaGACTAATCATGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVGREFY*TNHAER
Trigger: TCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTCTCACAATCACATGCTaGCCAGACTGGAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLLTITC*PDWKSF
Trigger: AAAGGATTTCCAGTCTGGCCAGCATGTGATTGTGAG...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAACCACACAACTGAGCTaGGATTTGTACGCATCATCA +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRTTQLS*DLYASS
Trigger: TGATGATGCGTACAAATCCCAGCTCAGTTGTGTGGT...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAGTAAGCACCTTAGGATaGCTTCTAATTGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVVSTLG*LLIACP
Trigger: AGGACAAGCAATTAGAAGCCATCCTAAGGTGCTTAC...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCACCCAAGTGCCACTGTaGCCACAAGCCTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: WSWTLISAERFVNYFNNSTQVPL*PQASWV
Trigger: CACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGT...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCCCAGCCCATTTTCTCTaGGGTAAACTGAATGCAATG +
Preference number: 4 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSPAHFL*GKLNAM
Trigger: CATTGCATTCAGTTTACCTCAGAGAAAATGGGCTGG...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCTGGACAATAAAGGACTaGGGGAGAGGGCTAGAAAAT +
Preference number: 4 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSWTIKD*GRGLEN
Trigger: ATTTTCTAGCCCTCTCCCTCAGTCCTTTATTGTCCA...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCCTCATGGGTGGCGTGTaGGGTAAGCACCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: WSWTLISAERFVNYFNNSLMGGV*GKHLRM
Trigger: CATCCTAAGGTGCTTACCTCACACGCCACCCATGAG...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTATCTGCTTTCTCACATaGGGACAAATAACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLICFLT*GQITEE
Trigger: CTCCTCTGTTATTTGTCCTCATGTGAGAAAGCAGAT...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTAACATCTATTATTTTTaGCTCCCAGCATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSNIYYF*LPASLP
Trigger: AGGAAGGGATGCTGGGAGTCAAAAATAATAGATGTT...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAAACATCTATTATTTTTaGCTCCCAGCATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVNIYYF*LPASLP
Trigger: AGGAAGGGATGCTGGGAGTCAAAAATAATAGATGTT...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTGGAAGGGAGTTTTATTaGACTAATCATGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLGREFY*TNHAER
Trigger: TCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCCTGTTTGGGGGTGTATaGTTTTTCCATACCTATCTT +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFLFGGV*FFHTYL
Trigger: AAGATAGGTATGGAAAAAGCATACACCCCCAAACAG...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTAAAGGACTCAACGGGTaGTTCCTTTTGGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERKGLNG*FLLEEV
Trigger: CACTTCTTCCAAAAGGAAGCACCCGTTGAGTCCTTT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTCTAATTGCTTGTCCTTaGATTTTAAGCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSLIACP*ILSSSW
Trigger: CCAACTGCTGCTTAAAATGCAAGGACAAGCAATTAG...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCGGCCTTTCTCATCTaGCAAGCCTATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERSAFLI*QAYLHF
Trigger: AAAATGGAGATAGGCTTGCCAGATGAGAAAGGCCGA...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTGTTTGTGCCAAAGGCTaGTTTGATATCATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSVCAKG*FDIILQ
Trigger: TTGGAGAATGATATCAAACCAGCCTTTGGCACAAAC...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCGTTTGTGCCAAAGGCTaGTTTGATATCATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFVCAKG*FDIILQ
Trigger: TTGGAGAATGATATCAAACCAGCCTTTGGCACAAAC...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAGTTTGTGCCAAAGGCTaGTTTGATATCATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVVCAKG*FDIILQ
Trigger: TTGGAGAATGATATCAAACCAGCCTTTGGCACAAAC...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATAAGCACGCTGACCAATaGTGTGCGGTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHKHADQ*CAVTVL
Trigger: AAGAACAGTGACCGCACACCATTGGTCAGCGTGCTT...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTACAAAGATCTTCTTCATaGCCTGACATTTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVQRSSS*PDIWLF
Trigger: AAACAGCCAAATGTCAGGCCATGAAGAAGATCTTTG...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTCAAAGATCTTCTTCATaGCCTGACATTTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSQRSSS*PDIWLF
Trigger: AAACAGCCAAATGTCAGGCCATGAAGAAGATCTTTG...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAACCACACAACTGAGCTaGGATTTGTACGCATCATCA +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGRETTQLS*DLYASS
Trigger: TGATGATGCGTACAAATCCCAGCTCAGTTGTGTGGT...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTGTAAGCACCTTAGGATaGCTTCTAATTGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLVSTLG*LLIACP
Trigger: AGGACAAGCAATTAGAAGCCATCCTAAGGTGCTTAC...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTATCTTCTTCATGGCCTaGCATTTGGCTGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERIFFMA*HLAVSE
Trigger: TTCTGAAACAGCCAAATGTCAGGCCATGAAGAAGAT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAATCTTCTTCATGGCCTaGCATTTGGCTGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGREIFFMA*HLAVSE
Trigger: TTCTGAAACAGCCAAATGTCAGGCCATGAAGAAGAT...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAACATTCTAAACCAAATTaGCACCTTCCACGAGACACT +
Preference number: 4 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKHSKPN*HLPRDT
Trigger: AGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAATG...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACATTCTAAACCAAATTaGCACCTTCCACGAGACACT +
Preference number: 4 (lower is better)
Translates to: REFYCTNHAERAHVEGREHSKPN*HLPRDT
Trigger: AGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAATG...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCCCCACCCAGAGGGACTaGGCAAGAAGGAATCACTTT +
Preference number: 4 (lower is better)
Translates to: WSWTLISAERFVNYFNNSPTQRD*ARRNHF
Trigger: AAAGTGATTCCTTCTTGCTCAGTCCCTCTGGGTGGG...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTATCTGCTTTCTCACATaGGGACAAATAACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERICFLT*GQITEE
Trigger: CTCCTCTGTTATTTGTCCTCATGTGAGAAAGCAGAT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAAACATCTATTATTTTTaGCTCCCAGCATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRNIYYF*LPASLP
Trigger: AGGAAGGGATGCTGGGAGTCAAAAATAATAGATGTT...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCGGAAGGGAGTTTTATTaGACTAATCATGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSGREFY*TNHAER
Trigger: TCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTCTAATTGCTTGTCCTTaGATTTTAAGCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLLIACP*ILSSSW
Trigger: CCAACTGCTGCTTAAAATGCAAGGACAAGCAATTAG...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTCAAAGATCTTCTTCATaGCCTGACATTTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IALIMQSEHMLKVENVPLQRSSS*PDIWLF
Trigger: AAACAGCCAAATGTCAGGCCATGAAGAAGATCTTTG...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAAGAATACCAGTCTTGTaGGAGACCTTTAACCAAATA +
Preference number: 4 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVRIPVL*ETFNQI
Trigger: TATTTGGTTAAAGGTCTCCCACAAGACTGGTATTCT...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGATTTGGAAGAAGTGTGTaGAGGGTAAAGGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRFGRSV*RVKEMC
Trigger: ACACATTTCCTTTACCCTCCACACACTTCTTCCAAA...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTAGGAATCCAGGATACTaGCCACCAGGAATCACAGGA +
Preference number: 4 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCRNPGY*PPGITG
Trigger: TCCTGTGATTCCTGGTGGCCAGTATCCTGGATTCCT...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
3UTR CAA 72 bp AGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCT +
Preference number: 4 (lower is better)
Translates to: SFIALIMQSEHM*KVENVPLSPVS
Trigger: AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
3UTR CAA 72 bp AATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTaGTGGGAGACCTTTAACCAAATACCCAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: NALFLQAKRIPV*WETFNQIPSDF
Trigger: AAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTATTATACTAAGGAATTaGCCCACTTGGAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERIILRN*PTWSWT
Trigger: TGTCCAACTCCAAGTGGGTCAATTCCTTAGTATAAT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAAAAACAAAGAAGATATaGCATCCAAGTCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: GREFYCTNHAERAHVEGRKTKKI*HPSLHQ
Trigger: TTGGTGGAGACTTGGATGTCATATCTTCTTTGTTTT...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATTTCTTCCCTTTGACTTaGTGTGCAATTGTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHFFPLT*CAIVVR
Trigger: ACGCACCACAATTGCACAGCAAGTCAAAGGGAAGAA...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATAAAGGACTCAACGGGTaGTTCCTTTTGGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHKGLNG*FLLEEV
Trigger: CACTTCTTCCAAAAGGAAGCACCCGTTGAGTCCTTT...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATTCGGCCTTTCTCATCTaGCAAGCCTATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHSAFLI*QAYLHF
Trigger: AAAATGGAGATAGGCTTGCCAGATGAGAAAGGCCGA...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTGTTTGTGCCAAAGGCTaGTTTGATATCATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERVCAKG*FDIILQ
Trigger: TTGGAGAATGATATCAAACCAGCCTTTGGCACAAAC...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTCAAAGATCTTCTTCATaGCCTGACATTTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERQRSSS*PDIWLF
Trigger: AAACAGCCAAATGTCAGGCCATGAAGAAGATCTTTG...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CCA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTCCAAAAGTATACAAATaGCAAGATTTGGAGATGATC +
Preference number: 4 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSPKVYK*QDLEMI
Trigger: GATCATCTCCAAATCTTGCCATTTGTATACTTTTGG...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTCCAGCCCATTTTCTCTaGGGTAAACTGAATGCAATG +
Preference number: 4 (lower is better)
Translates to: SILEIQCLVSSGKENTSLPAHFL*GKLNAM
Trigger: CATTGCATTCAGTTTACCTCAGAGAAAATGGGCTGG...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCTGCGTTCCTTATCCTTaGAGTTGCCCAAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WSWTLISAERFVNYFNNSCVPYP*SCPKAP
Trigger: TGGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCA...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATCATTCTAAACCAAATTaGCACCTTCCACGAGACACT +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHHSKPN*HLPRDT
Trigger: AGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAATG...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR TCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATATTCATGACACTGACTaGGAGTTTTCAAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHIHDTD*EFSRVM
Trigger: CATCACCCTTGAAAACTCTCAGTCAGTGTCATGAAT...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTGAGAGGGCTAGAAAATaGTTGATTTTTCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERERARK*LIFLEN
Trigger: ATTCTCCAGAAAAATCAATCATTTTCTAGCCCTCTC...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTGGCAAGATTTGGAGATaGTCTGCTTTCTCACATGAG +
Preference number: 4 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCGKIWR*SAFSHE
Trigger: CTCATGTGAGAAAGCAGATCATCTCCAAATCTTGCC...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTAAAACAAAGAAGATATaGCATCCAAGTCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERKTKKI*HPSLHQ
Trigger: TTGGTGGAGACTTGGATGTCATATCTTCTTTGTTTT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTTTCTTCCCTTTGACTTaGTGTGCAATTGTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SILEIQCLVSSGKENTSLFFPLT*CAIVVR
Trigger: ACGCACCACAATTGCACAGCAAGTCAAAGGGAAGAA...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATGGAAGGGAGTTTTATTaGACTAATCATGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHGREFY*TNHAER
Trigger: TCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR GCA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTAGGATGGCTTCTAATTaGTTGTCCTTGCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: EFYCTNHAERAHVEGRERRMASN*LSLHFK
Trigger: CTTAAAATGCAAGGACAAGCAATTAGAAGCCATCCT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTCTCACAATCACATGCTaGCCAGACTGGAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCLTITC*PDWKSF
Trigger: AAAGGATTTCCAGTCTGGCCAGCATGTGATTGTGAG...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTTCGGCCTTTCTCATCTaGCAAGCCTATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: SILEIQCLVSSGKENTSLSAFLI*QAYLHF
Trigger: AAAATGGAGATAGGCTTGCCAGATGAGAAAGGCCGA...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTTCGGCCTTTCTCATCTaGCAAGCCTATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCSAFLI*QAYLHF
Trigger: AAAATGGAGATAGGCTTGCCAGATGAGAAAGGCCGA...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATCTGTTTGGGGGTGTATaGTTTTTCCATACCTATCTT +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHLFGGV*FFHTYL
Trigger: AAGATAGGTATGGAAAAAGCATACACCCCCAAACAG...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCAAAGGACTCAACGGGTaGTTCCTTTTGGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: WSWTLISAERFVNYFNNSKGLNG*FLLEEV
Trigger: CACTTCTTCCAAAAGGAAGCACCCGTTGAGTCCTTT...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATGAGAGGGCTAGAAAATaGTTGATTTTTCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHERARK*LIFLEN
Trigger: ATTCTCCAGAAAAATCAATCATTTTCTAGCCCTCTC...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR TCA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATAAAACAAAGAAGATATaGCATCCAAGTCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHKTKKI*HPSLHQ
Trigger: TTGGTGGAGACTTGGATGTCATATCTTCTTTGTTTT...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR GCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTAGGATGGCTTCTAATTaGTTGTCCTTGCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCRMASN*LSLHFK
Trigger: CTTAAAATGCAAGGACAAGCAATTAGAAGCCATCCT...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCCAAAGATCTTCTTCATaGCCTGACATTTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WSWTLISAERFVNYFNNSQRSSS*PDIWLF
Trigger: AAACAGCCAAATGTCAGGCCATGAAGAAGATCTTTG...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTAGAATACCAGTCTTGTaGGAGACCTTTAACCAAATA +
Preference number: 4 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCRIPVL*ETFNQI
Trigger: TATTTGGTTAAAGGTCTCCCACAAGACTGGTATTCT...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CCA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTCCAAAAGTATACAAATaGCAAGATTTGGAGATGATC +
Preference number: 4 (lower is better)
Translates to: SILEIQCLVSSGKENTSLPKVYK*QDLEMI
Trigger: GATCATCTCCAAATCTTGCCATTTGTATACTTTTGG...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS GCA 90 bp TCCAGAAGCACGCTGACCAATGGTGTGCGGTCACTGTTCTTAGTCTaGTGCACCAGCAGCTCCCCATCATCTAGAACTCGAGTAACTGGG +
Preference number: 5 (lower is better)
Translates to: SRSTLTNGVRSLFLV*CTSSSPSSRTRVTG
Trigger: CCCAGTTACTCGAGTTCTAGATGATGGGGAGCTGCTGGTGCAGCAGACTAAGAACAGTGACCGCACACCATTGGTCAGCGTGCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGACTGGGTCACCCCATTaGATGATACCGTTCATAATG +
Preference number: 5 (lower is better)
Translates to: PLWPQASWVACEVSTLGWTGSPH*MIPFIM
Trigger: CATTATGAACGGTATCATCAAATGGGGTGACCCAGT...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTAAGAGAATACCAGTCTaGTGGGAGACCTTTAACCAA +
Preference number: 5 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRKRIPV*WETFNQ
Trigger: TTGGTTAAAGGTCTCCCACAAGACTGGTATTCTCTT...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGGACATCTTGCCGCTaGCATGCTCCGGCCCGCCAT +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLRTSCR*HAPARH
Trigger: ATGGCGGGCCGGAGCATGCAAGCGGCAAGATGTCCT...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp CCACTGTGGCCACAAGCCTCATGGGTGGCGTGTGAGGTAAGCACCTTAGGATGGATTCCTCTGCAATTTTaGCAGCTAAAGCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: PLWPQASWVACEVSTLGWIPLQF*QLKQSS
Trigger: GGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAAT...CCATCCTAAGGTGCTTACCTCACACGCCACCCATGAGGCTTGTGGCCACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AACAGAGGAGCCACACCCAAGTGCCACTGTGGCCACAAGCCTCATGGGTGGCGTTCTAATTGCTTGTCCTaGCATTTTAAGCAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: NRGATPKCHCGHKPHGWRSNCLS*HFKQQL
Trigger: CAACTGCTGCTTAAAATGCAAGGACAAGCAATTAGA...ACGCCACCCATGAGGCTTGTGGCCACAGTGGCACTTGGGTGTGGCTCCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTCCTGTGGCAATGTaGGGCACGTGGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVSPVAM*GTWMVV
Trigger: CACCACCATCCACGTGCCCAACATTGCCACAGGAGA...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTTCTCCTGTGGCAATGTaGGGCACGTGGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSSPVAM*GTWMVV
Trigger: CACCACCATCCACGTGCCCAACATTGCCACAGGAGA...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGATCTCCTGTGGCAATGTaGGGCACGTGGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GREFYCTNHAERAHVEGRSPVAM*GTWMVV
Trigger: CACCACCATCCACGTGCCCAACATTGCCACAGGAGA...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS TCA 90 bp TTGGATTCCTCTGCAATTTTTGCAGCTAAAGCAGTCTTCCCACTGTaGGGAGGGCCTACATTTAGACATCCCTGCCTTCCCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: LDSSAIFAAKAVFPL*GGPTFRHPCLPFPV
Trigger: AACAGGGAAGGGAAGGCAGGGATGTCTAAATGTAGGCCCTCCTCACAGTGGGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAATCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000576346.5
ENST00000628506.2
ENST00000633902.1
CDS CCA 90 bp GAGGAGGGCCTACATTTAGACATCCCTGCCTTCCCTTCCCTGTTTTaGAAGCTGTGTCCCTCGTTCAACCATAAACCAATCAAATCTTCC +
Preference number: 5 (lower is better)
Translates to: EEGLHLDIPAFPSLF*KLCPSFNHKPIKSS
Trigger: GGAAGATTTGATTGGTTTATGGTTGAACGAGGGACACAGCTTCCAAAACAGGGAAGGGAAGGCAGGGATGTCTAAATGTAGGCCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000576346.5
ENST00000628506.2
ENST00000633902.1
CDS-3UTR CAA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATAGGACATCTTGCCGCTaGCATGCTCCGGCCCGCCAT +
Preference number: 5 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHRTSCR*HAPARH
Trigger: ATGGCGGGCCGGAGCATGCAAGCGGCAAGATGTCCT...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAATCTCCTGTGGCAATGTaGGGCACGTGGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKSPVAM*GTWMVV
Trigger: CACCACCATCCACGTGCCCAACATTGCCACAGGAGA...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCGTGCGTTCCTTATCCTaGAAGTTGCCCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFVRSLS*KLPKSS
Trigger: GGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCAC...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTCAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCA +
Preference number: 5 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSQSEHM*KVENVP
Trigger: TGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTG...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTACAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCA +
Preference number: 5 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVQSEHM*KVENVP
Trigger: TGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTG...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAAACGGGTGCTTCCTTTaGGAAGAAGTGTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GREFYCTNHAERAHVEGRNGCFL*EEVCGG
Trigger: CCCTCCACACACTTCTTCCAAAAGGAAGCACCCGTT...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp CGTGTAGTGTCCACAAGTACTGGATGGTTCCCACCCAGAGGGACTGAGCAAGAATCTAATTGCTTGTCCTaGCATTTTAAGCAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RVVSTSTGWFPPRGTEQESNCLS*HFKQQL
Trigger: CAACTGCTGCTTAAAATGCAAGGACAAGCAATTAGA...TTCTTGCTCAGTCCCTCTGGGTGGGAACCATCCAGTACTTGTGGACACTACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCAGGACATCTTGCCGCTaGCATGCTCCGGCCCGCCAT +
Preference number: 5 (lower is better)
Translates to: WSWTLISAERFVNYFNNSRTSCR*HAPARH
Trigger: ATGGCGGGCCGGAGCATGCAAGCGGCAAGATGTCCT...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTGTGCGTTCCTTATCCTaGAAGTTGCCCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLVRSLS*KLPKSS
Trigger: GGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCAC...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTCAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCA +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLQSEHM*KVENVP
Trigger: TGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTG...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATGGTGCTAGTAGAGAGGTTGAAACGTGTAGTGTCCACAAGTACTGGATGGTTCGTGCTAGTAGAGAGGTaGAAACGTGTAGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: MVLVERLKRVVSTSTGWFVLVER*KRVVST
Trigger: TGTGGACACTACACGTTTCAACCTCTCTACTAGCAC...GAACCATCCAGTACTTGTGGACACTACACGTTTCAACCTCTCTACTAGCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAAACGGGTGCTTCCTTTaGGAAGAAGTGTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGRENGCFL*EEVCGG
Trigger: CCCTCCACACACTTCTTCCAAAAGGAAGCACCCGTT...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTACTGGGTCACCCCATTaGATGATACCGTTCATAATG +
Preference number: 5 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSTGSPH*MIPFIM
Trigger: CATTATGAACGGTATCATCAAATGGGGTGACCCAGT...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTTCAGGAGAACAGATCTaGATGAACGGGAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSSGEQI*MNGKLD
Trigger: ATCCAACTTCCCGTTCATCAAGATCTGTTCTCCTGA...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTGTGCGTTCCTTATCCTaGAAGTTGCCCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: EFYCTNHAERAHVEGRERVRSLS*KLPKSS
Trigger: GGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCAC...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAGTGCGTTCCTTATCCTaGAAGTTGCCCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGREVRSLS*KLPKSS
Trigger: GGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCAC...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCCAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCA +
Preference number: 5 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSQSEHM*KVENVP
Trigger: TGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTG...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCTAATCGGCCAACTGTaGTCATGCAACATTCATGAC +
Preference number: 5 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSLIGQL*SCNIHD
Trigger: GTCATGAATGTTGCATGACAACAGTTGGCCGATTAG...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTGAGCAAACCCTTCCTTaGGGAAACTGTTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: EFYCTNHAERAHVEGREREQTLP*GNCSFP
Trigger: GGGAAAGGAACAGTTTCCCAAAGGAAGGGTTTGCTC...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTACTGGGTCACCCCATTaGATGATACCGTTCATAATG +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLTGSPH*MIPFIM
Trigger: CATTATGAACGGTATCATCAAATGGGGTGACCCAGT...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAATTCCTCTGCAATTTTaGCAGCTAAAGCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVIPLQF*QLKQSS
Trigger: GGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAAT...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTTCAGGAGAACAGATCTaGATGAACGGGAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLSGEQI*MNGKLD
Trigger: ATCCAACTTCCCGTTCATCAAGATCTGTTCTCCTGA...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTCAACTGAGCTGGGATTaGTACGCATCATCAAAGATC +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLQLSWD*YASSKI
Trigger: GATCTTTGATGATGCGTACAAATCCCAGCTCAGTTG...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GGAAGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGACAACTGAGCTGGGATTaGTACGCATCATCAAAGATC +
Preference number: 5 (lower is better)
Translates to: GREFYCTNHAERAHVEGRQLSWD*YASSKI
Trigger: GATCTTTGATGATGCGTACAAATCCCAGCTCAGTTG...TCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp CCCACACCTCGATTTACTAAGCCAGATTTGCATGTAGAAAGTCTGCCTTCTAATGTGCTAGTAGAGAGGTaGAAACGTGTAGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: PTPRFTKPDLHVESLPSNVLVER*KRVVST
Trigger: TGTGGACACTACACGTTTCAACCTCTCTACTAGCAC...ATTAGAAGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAATCGAGGTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTAAGAGAATACCAGTCTaGTGGGAGACCTTTAACCAA +
Preference number: 5 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSKRIPV*WETFNQ
Trigger: TTGGTTAAAGGTCTCCCACAAGACTGGTATTCTCTT...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTAGAACATCTATTATTTTaGACTCCCAGCATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVEHLLF*TPSIPS
Trigger: GGAAGGGATGCTGGGAGTCAAAAATAATAGATGTTC...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTGAACATCTATTATTTTaGACTCCCAGCATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSEHLLF*TPSIPS
Trigger: GGAAGGGATGCTGGGAGTCAAAAATAATAGATGTTC...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAACTTGCATAATCTTCTaGGTTTGTGCCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKTCIIF*VCAKGW
Trigger: CCAGCCTTTGGCACAAACCAAGAAGATTATGCAAGT...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAACTTGCATAATCTTCTaGGTTTGTGCCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGRETCIIF*VCAKGW
Trigger: CCAGCCTTTGGCACAAACCAAGAAGATTATGCAAGT...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCACTGGGTCACCCCATTaGATGATACCGTTCATAATG +
Preference number: 5 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSTGSPH*MIPFIM
Trigger: CATTATGAACGGTATCATCAAATGGGGTGACCCAGT...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAACTGGGTCACCCCATTaGATGATACCGTTCATAATG +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGRETGSPH*MIPFIM
Trigger: CATTATGAACGGTATCATCAAATGGGGTGACCCAGT...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTATTCCTCTGCAATTTTaGCAGCTAAAGCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLIPLQF*QLKQSS
Trigger: GGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAAT...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATCTTTGATGAACGGGAAGTaGGATTCCTCTGCAATTTTT +
Preference number: 5 (lower is better)
Translates to: MQSEHMLKVENVPLSPVSLMNGK*DSSAIF
Trigger: AAAAATTGCAGAGGAATCCAACTTCCCGTTCATCAA...AGATACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAATCAGGAGAACAGATCTaGATGAACGGGAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGRESGEQI*MNGKLD
Trigger: ATCCAACTTCCCGTTCATCAAGATCTGTTCTCCTGA...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAATCAGGAGAACAGATCTaGATGAACGGGAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKSGEQI*MNGKLD
Trigger: ATCCAACTTCCCGTTCATCAAGATCTGTTCTCCTGA...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACAACTGAGCTGGGATTaGTACGCATCATCAAAGATC +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGREQLSWD*YASSKI
Trigger: GATCTTTGATGATGCGTACAAATCCCAGCTCAGTTG...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAACAACTGAGCTGGGATTaGTACGCATCATCAAAGATC +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKQLSWD*YASSKI
Trigger: GATCTTTGATGATGCGTACAAATCCCAGCTCAGTTG...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACTAATCGGCCAACTGTaGTCATGCAACATTCATGAC +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGRELIGQL*SCNIHD
Trigger: GTCATGAATGTTGCATGACAACAGTTGGCCGATTAG...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTATAACTCCTTTCTGTTaGGGGGTGTATGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLITPFC*GVYAFS
Trigger: GGAAAAAGCATACACCCCCAAACAGAAAGGAGTTAT...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTCCAGTATATTATACTAAGGAATaGACCCACTTGGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: IMQSEHMLKVENVPLSPVYYTKE*THLELD
Trigger: GTCCAACTCCAAGTGGGTCAATTCCTTAGTATAATA...TACTGGACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTAACGGGTGCTTCCTTTaGGAAGAAGTGTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCNGCFL*EEVCGG
Trigger: CCCTCCACACACTTCTTCCAAAAGGAAGCACCCGTT...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTAGTTACAAATGGCAAGATTaGGAGATGATCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: ALIMQSEHMLKVENVPLSYKWQD*EMICFL
Trigger: GAGAAAGCAGATCATCTCCAAATCTTGCCATTTGTA...ACTAAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAAATTCCTCTGCAATTTTaGCAGCTAAAGCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKIPLQF*QLKQSS
Trigger: GGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAAT...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTATTCCTCTGCAATTTTaGCAGCTAAAGCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: EFYCTNHAERAHVEGRERIPLQF*QLKQSS
Trigger: GGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAAT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTGTGCGTTCCTTATCCTaGAAGTTGCCCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCVRSLS*KLPKSS
Trigger: GGAGCTTTTGGGCAACTTCAAGGATAAGGAACGCAC...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTATAACTCCTTTCTGTTaGGGGGTGTATGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: EFYCTNHAERAHVEGRERITPFC*GVYAFS
Trigger: GGAAAAAGCATACACCCCCAAACAGAAAGGAGTTAT...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTCCACTTTCTAATTGCTTGTCCTaGCATTTTAAGCAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: IALIMQSEHMLKVENVPLSNCLS*HFKQQL
Trigger: CAACTGCTGCTTAAAATGCAAGGACAAGCAATTAGA...AAGTGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGGGAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAAGAACATCTATTATTTTaGACTCCCAGCATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: REFYCTNHAERAHVEGREEHLLF*TPSIPS
Trigger: GGAAGGGATGCTGGGAGTCAAAAATAATAGATGTTC...TTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000575068.5
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GAGTTTTATTGCACTAATCATGCAGAGCGAGCACATGTTGAAGGTAGAGAACGTTTGATGAACGGGAAGTaGGATTCCTCTGCAATTTTT +
Preference number: 5 (lower is better)
Translates to: EFYCTNHAERAHVEGRERLMNGK*DSSAIF
Trigger: AAAAATTGCAGAGGAATCCAACTTCCCGTTCATCAA...ACGTTCTCTACCTTCAACATGTGCTCGCTCTGCATGATTAGTGCAATAAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAATTGATGAACGGGAAGTaGGATTCCTCTGCAATTTTT +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKLMNGK*DSSAIF
Trigger: AAAAATTGCAGAGGAATCCAACTTCCCGTTCATCAA...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATTCAGGAGAACAGATCTaGATGAACGGGAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHSGEQI*MNGKLD
Trigger: ATCCAACTTCCCGTTCATCAAGATCTGTTCTCCTGA...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATCAACTGAGCTGGGATTaGTACGCATCATCAAAGATC +
Preference number: 5 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHQLSWD*YASSKI
Trigger: GATCTTTGATGATGCGTACAAATCCCAGCTCAGTTG...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCCAGAGCGAGCACATGTaGAAGGTAGAGAACGTTCCA +
Preference number: 5 (lower is better)
Translates to: WSWTLISAERFVNYFNNSQSEHM*KVENVP
Trigger: TGGAACGTTCTCTACCTTCAACATGTGCTCGCTCTG...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTGTGCTAGTAGAGAGGTaGAAACGTGTAGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCVLVER*KRVVST
Trigger: TGTGGACACTACACGTTTCAACCTCTCTACTAGCAC...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAATTTACTAAGCCAGATTaGCATGTAGAAAGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKFTKPD*HVESLP
Trigger: AGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAA...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp GGATACTGGCCACCAGGAATCACAGGATCTCACAATACAATCCACTTCTTTAAATCTTCTGACTGCAACTaGAAAACATCTCTGACAATG +
Preference number: 5 (lower is better)
Translates to: GYWPPGITGSHNTIHFFKSSDCN*KTSLTM
Trigger: CATTGTCAGAGATGTTTTCAAGTTGCAGTCAGAAGA...TTTAAAGAAGTGGATTGTATTGTGAGATCCTGTGATTCCTGGTGGCCAGTATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCTCTTCTGACTGCAACTaGAAAACATCTCTGACAATG +
Preference number: 5 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSSSDCN*KTSLTM
Trigger: CATTGTCAGAGATGTTTTCAAGTTGCAGTCAGAAGA...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCTATTATACTAAGGAATaGACCCACTTGGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSYYTKE*THLELD
Trigger: GTCCAACTCCAAGTGGGTCAATTCCTTAGTATAATA...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp TACCAGTCTTGTGGGAGACCTTTAACCAAATACCCAGTGACTTTTAGTGTTAGCTACAAATGGCAAGATTaGGAGATGATCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: YQSCGRPLTKYPVTFSVSYKWQD*EMICFL
Trigger: GAGAAAGCAGATCATCTCCAAATCTTGCCATTTGTA...GCTAACACTAAAAGTCACTGGGTATTTGGTTAAAGGTCTCCCACAAGACTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS CCA 90 bp AAGACAGTGAAGATCCTAGGCCATCTTCACCTTGGTCACTTCCCTTaGTCACTGTGTGTTTCAAATAGTTCATTTTCAATCAAAATCAAG +
Preference number: 5 (lower is better)
Translates to: KTVKILGHLHLGHFP*SLCVSNSSFSIKIK
Trigger: CTTGATTTTGATTGAAAATGAACTATTTGAAACACACAGTGACCAAGGGAAGTGACCAAGGTGAAGATGGCCTAGGATCTTCACTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTACTGGGTCACCCCATTaGATGATACCGTTCATAATG +
Preference number: 5 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCTGSPH*MIPFIM
Trigger: CATTATGAACGGTATCATCAAATGGGGTGACCCAGT...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATATTCCTCTGCAATTTTaGCAGCTAAAGCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHIPLQF*QLKQSS
Trigger: GGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAAT...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTCTAATCGGCCAACTGTaGTCATGCAACATTCATGAC +
Preference number: 5 (lower is better)
Translates to: SILEIQCLVSSGKENTSLLIGQL*SCNIHD
Trigger: GTCATGAATGTTGCATGACAACAGTTGGCCGATTAG...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS GCA 90 bp AGTAACTGGGTCACCCCATTTGATGATACCGTTCATAATGTAACTTaGATAATCTTCTTGGTTTGTGCCAAAGGCTGGTTTGATATCATT +
Preference number: 5 (lower is better)
Translates to: SNWVTPFDDTVHNVT*IIFLVCAKGWFDII
Trigger: AATGATATCAAACCAGCCTTTGGCACAAACCAAGAAGATTATGCAAGTTACATTATGAACGGTATCATCAAATGGGGTGACCCAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp ATTCTAAACCAAATTGACACCTTCCACGAGACACTAAGCTATCTCAGTATGCATTTGATGAACGGGAAGTaGGATTCCTCTGCAATTTTT +
Preference number: 5 (lower is better)
Translates to: ILNQIDTFHETLSYLSMHLMNGK*DSSAIF
Trigger: AAAAATTGCAGAGGAATCCAACTTCCCGTTCATCAA...ATGCATACTGAGATAGCTTAGTGTCTCGTGGAAGGTGTCAATTTGGTTTAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS-3UTR CAA 90 bp CATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTGTTTTACTAAGCCAGATTaGCATGTAGAAAGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: HFRDSMPCFFRQREYQSCFTKPD*HVESLP
Trigger: AGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAA...ACAAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTTATTATACTAAGGAATaGACCCACTTGGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: SILEIQCLVSSGKENTSLYYTKE*THLELD
Trigger: GTCCAACTCCAAGTGGGTCAATTCCTTAGTATAATA...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp AGCATTTTAGAGATTCAATGCCTTGTTTCTTCAGGCAAAGAGAATACCAGTCTTATGGCTTCTAATTGCTaGTCCTTGCATTTTAAGCAG +
Preference number: 5 (lower is better)
Translates to: SILEIQCLVSSGKENTSLMASNC*SLHFKQ
Trigger: CTGCTTAAAATGCAAGGACAAGCAATTAGAAGCCAT...AAGACTGGTATTCTCTTTGCCTGAAGAAACAAGGCATTGAATCTCTAAAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS-3UTR CAA 90 bp TGGAGTTGGACACTAATTAGTGCTGAGAGGTTTGTAAATTACTTTAATAACTCCTTTACTAAGCCAGATTaGCATGTAGAAAGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: WSWTLISAERFVNYFNNSFTKPD*HVESLP
Trigger: AGGCAGACTTTCTACATGCAAATCTGGCTTAGTAAA...GGAGTTATTAAAGTAATTTACAAACCTCTCAGCACTAATTAGTGTCCAACTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398238.8
ENST00000611398.3
ENST00000620290.2
CDS CCA 72 bp ACTGTGAGGAGGGCCTTCCAGAAGCACGCTGACCAATaGTGTGCGGTCACTGTTCTTAGTCTGCTGCACCAG +
Preference number: 6 (lower is better)
Translates to: TVRRAFQKHADQ*CAVTVLSLLHQ
Trigger: CTGGTGCAGCAGACTAAGAACAGTGACCGCACACCATTGGTCAGCGTGCTTCTGGAAGGCCCTCCTCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS CCA 72 bp TCCAACAGCTGCTCTCCTGTGGCAATGTTGGGCACGTaGATGGTGGTGCTGAAAGCGTTAAGCATTTCCATC +
Preference number: 6 (lower is better)
Translates to: SNSCSPVAMLGT*MVVLKALSISI
Trigger: GATGGAAATGCTTAACGCTTTCAGCACCACCATCCACGTGCCCAACATTGCCACAGGAGAGCAGCTGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000398238.8
ENST00000465370.1
ENST00000575068.5
ENST00000576346.5
ENST00000611398.3
ENST00000620290.2
ENST00000628495.1
ENST00000628506.2
ENST00000631254.2
ENST00000632125.1
ENST00000632862.1
ENST00000633902.1
CDS CAA 90 bp CCCAAAAGCTCCAAAGCTTCCAACAGCTGCTCTCCTGTGGCAATGTaGGGCACGTGGATGGTGGTGCTGAAAGCGTTAAGCATTTCCATC +
Preference number: 6 (lower is better)
Translates to: PKSSKASNSCSPVAM*GTWMVVLKALSISI
Trigger: GATGGAAATGCTTAACGCTTTCAGCACCACCATCCACGTGCCCAACATTGCCACAGGAGAGCAGCTGTTGGAAGCTTTGGAGCTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000398238.8
ENST00000465370.1
ENST00000575068.5
ENST00000576346.5
ENST00000611398.3
ENST00000620290.2
ENST00000628495.1
ENST00000628506.2
ENST00000631254.2
ENST00000632125.1
ENST00000632862.1
ENST00000633902.1
CDS CAA 72 bp GGGAGAGCAAACCAACAGTACAACCAACTTCCTTGCTaGGTCTCTCGGACGCTCCTTCTTCTCTTAAGAGGG +
Preference number: 6 (lower is better)
Translates to: GRANQQYNQLPC*VSRTLLLLLRG
Trigger: CCCTCTTAAGAGAAGAAGGAGCGTCCGAGAGACCAAGCAAGGAAGTTGGTTGTACTGTTGGTTTGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465370.1
ENST00000628495.1
ENST00000632862.1
CDS GCA 72 bp ACAGGGAGAGCAAACCAACAGTACAACCAACTTCCTTaGTTGGTCTCTCGGACGCTCCTTCTTCTCTTAAGA +
Preference number: 6 (lower is better)
Translates to: TGRANQQYNQLP*LVSRTLLLLLR
Trigger: TCTTAAGAGAAGAAGGAGCGTCCGAGAGACCAAGCAAGGAAGTTGGTTGTACTGTTGGTTTGCTCTCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465370.1
ENST00000628495.1
ENST00000632862.1
CDS CCA 72 bp CTACATTTAGACATCCCTGCCTTCCCTTCCCTGTTTTaGAAGCTGTGTCCCTCGTTCAACCATAAACCAATC +
Preference number: 6 (lower is better)
Translates to: LHLDIPAFPSLF*KLCPSFNHKPI
Trigger: GATTGGTTTATGGTTGAACGAGGGACACAGCTTCCAAAACAGGGAAGGGAAGGCAGGGATGTCTAAATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000576346.5
ENST00000628506.2
ENST00000633902.1
CDS TCA 72 bp CAAGCAATCTCTCAATGTCATCCACAACCACACAACTaGGCTGGGATTTGTACGCATCATCAAAGATCTTCT +
Preference number: 6 (lower is better)
Translates to: QAISQCHPQPHN*AGICTHHQRSS
Trigger: AGAAGATCTTTGATGATGCGTACAAATCCCAGCTCAGTTGTGTGGTTGTGGATGACATTGAGAGATTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000576346.5
ENST00000611398.3
ENST00000620290.2
ENST00000628506.2
ENST00000631254.2
ENST00000632125.1
ENST00000633902.1
CDS CAA 90 bp AAGCCAATCATTTTATCAGGAGAACAGATCTTGATGAACGGGAAGTaGGATTCCTCTGCAATTTTTGCAGCTAAAGCAGTCTTCCCACTG +
Preference number: 6 (lower is better)
Translates to: KPIILSGEQILMNGK*DSSAIFAAKAVFPL
Trigger: CAGTGGGAAGACTGCTTTAGCTGCAAAAATTGCAGAGGAATCCAACTTCCCGTTCATCAAGATCTGTTCTCCTGATAAAATGATTGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000576346.5
ENST00000611398.3
ENST00000620290.2
ENST00000628506.2
ENST00000631254.2
ENST00000632125.1
ENST00000633902.1
CDS GCA 72 bp GTCACCCCATTTGATGATACCGTTCATAATGTAACTTaGATAATCTTCTTGGTTTGTGCCAAAGGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: VTPFDDTVHNVT*IIFLVCAKGWF
Trigger: AAACCAGCCTTTGGCACAAACCAAGAAGATTATGCAAGTTACATTATGAACGGTATCATCAAATGGGGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000611398.3
ENST00000620290.2
ENST00000631254.2
ENST00000632125.1
CDS CAA 72 bp ATTTTATCAGGAGAACAGATCTTGATGAACGGGAAGTaGGATTCCTCTGCAATTTTTGCAGCTAAAGCAGTC +
Preference number: 6 (lower is better)
Translates to: ILSGEQILMNGK*DSSAIFAAKAV
Trigger: GACTGCTTTAGCTGCAAAAATTGCAGAGGAATCCAACTTCCCGTTCATCAAGATCTGTTCTCCTGATAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000398238.8
ENST00000575068.5
ENST00000576346.5
ENST00000611398.3
ENST00000620290.2
ENST00000628506.2
ENST00000631254.2
ENST00000632125.1
ENST00000633902.1