RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRXN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000021645

Ensembl transcript IDs: ENST00000281127.11, ENST00000335750.7, ENST00000428277.6, ENST00000553631.1, ENST00000553803.5, ENST00000554719.5, ENST00000554738.5, ENST00000555073.5, ENST00000555387.1, ENST00000556003.1, ENST00000556088.1, ENST00000556496.2, ENST00000557081.1, ENST00000557594.5, ENST00000634499.2, ENST00000635466.2, ENST00000676811.1, ENST00000679122.1

Found 1571 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGTGTGTCCTTT +
Preference number: 1 (lower is better)
Translates to: PSVSQRPLGPCRSRG*ALERDASLCVCVSF
Trigger: AAAGGACACACACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR GCA 90 bp GCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGA +
Preference number: 1 (lower is better)
Translates to: AEVVEPPSGSRALSV*FMIQQGTKPSVSQR
Trigger: TCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGTGTGTC +
Preference number: 1 (lower is better)
Translates to: KTFCLPATAGTLPQP*LSFRERCIAVCVCV
Trigger: GACACACACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR GCA 90 bp CTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGT +
Preference number: 1 (lower is better)
Translates to: LPFSKRSSGEGSFQA*GSGGATVRLQSAKC
Trigger: ACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR GCA 90 bp TCCCTGTCCTTGTTTTTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAGTTG +
Preference number: 1 (lower is better)
Translates to: SLSLFFCFLWPLFEL*CFSFMSVPLLWAEL
Trigger: CAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR GCA 90 bp AGCCATACCCAGATATCACCAAGCCATCATCATCACAACCATCGCTaGCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGG +
Preference number: 1 (lower is better)
Translates to: SHTQISPSHHHHNHR*LGPTSKVTPPQRSW
Trigger: CCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CCA 90 bp TATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCG +
Preference number: 1 (lower is better)
Translates to: YIRLGFEITVIHFAS*QFGHHPRRGGSCEA
Trigger: CGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR TCA 90 bp CATAGGCAGTGGGCAACGGAAGCAAGACTATATCAGGCTGGGGTTTaGGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCA +
Preference number: 1 (lower is better)
Translates to: HRQWATEARLYQAGV*DHGYSFCQLAIWAP
Trigger: TGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCACTGCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR TCA 90 bp ATCTTCATCATCAGTAGGGGGCAGGTTAGAGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCACCAAGCCATCATCATCACAACCATC +
Preference number: 1 (lower is better)
Translates to: IFIISRGQVRVKGFP*AIPRYHQAIIITTI
Trigger: GATGGTTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCCTACTGATGATGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR TCA 90 bp GGATTCCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATCTGTTACCAAGGAGAAGGTGGTGTA +
Preference number: 1 (lower is better)
Translates to: GFPLGRMCFVATFED*SGKTLICYQGEGGV
Trigger: TACACCACCTTCTCCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CCA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTACCAAGGAGAAGGTGGTGTAAAAAT +
Preference number: 1 (lower is better)
Translates to: PTWAHVLCSHLRRLK*KDSYLLPRRRWCKN
Trigger: ATTTTTACACCACCTTCTCCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CCA 90 bp ACCCATCTGTTCCGGGTTTGGGTGGTAAATTCTGAAATTAGATCCTaGGGGACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAAT +
Preference number: 1 (lower is better)
Translates to: THLFRVWVVNSEIRS*GTSFSNQFIIRHMN
Trigger: ATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTCCCCCAGGATCTAATTTCAGAATTTACCACCCAAACCCGGAACAGATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR TCA 90 bp ATGACATGGTTGGCTTGTGTGACCTTTTGTGGTTCCATCACGAGTTaGACTCCCCTACTGTCTGGTTTGATAACAGACTTTAATATTGTC +
Preference number: 1 (lower is better)
Translates to: MTWLACVTFCGSITS*TPLLSGLITDFNIV
Trigger: GACAATATTAAAGTCTGTTATCAAACCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCACAAAAGGTCACACAAGCCAACCATGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR TCA 90 bp CACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGT +
Preference number: 1 (lower is better)
Translates to: HKHYRLTWSYGTSKP*SLLPFSKRSSGEGS
Trigger: ACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR TCA 90 bp CAAGAAAAAGAAATCTCTCAGTGCATGAACAGAAGAAAGGCCCTGTaGGTACATAGTGAGAAGGTAGCTTATTATCTACAAGCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: QEKEISQCMNRRKAL*VHSEKVAYYLQARK
Trigger: CTTCCTGGCTTGTAGATAATAAGCTACCTTCTCACTATGTACTCACAGGGCCTTTCTTCTGTTCATGCACTGAGAGATTTCTTTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CCA 90 bp GGAAAGGCTGTTTTAGTTTGTGGGGCTTTCCTCTTTAACACAATTTaGCTGGGTGAATGGACAGGAACAATATTGTTACGTAAAGCCAAT +
Preference number: 1 (lower is better)
Translates to: GKAVLVCGAFLFNTI*LGEWTGTILLRKAN
Trigger: ATTGGCTTTACGTAACAATATTGTTCCTGTCCATTCACCCAGCCAAATTGTGTTAAAGAGGAAAGCCCCACAAACTAAAACAGCCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR TCA 90 bp ATGGTTTTGATCCTGCTTGCTCCCACTTTAAGGGTTTGCTTAGAATaGTATACAGCCCTTATTTCTGCCTATCAGTTTTCCAAGGTTTAC +
Preference number: 1 (lower is better)
Translates to: MVLILLAPTLRVCLE*YTALISAYQFSKVY
Trigger: GTAAACCTTGGAAAACTGATAGGCAGAAATAAGGGCTGTATATCATTCTAAGCAAACCCTTAAAGTGGGAGCAAGCAGGATCAAAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CCA 90 bp TTAGTTTGTGGGGCTTTCCTCTTTAACACAATTTGGCTGGGTGAATaGACAGGAACAATATTGTTACGTAAAGCCAATAGCTCTGATAAC +
Preference number: 1 (lower is better)
Translates to: LVCGAFLFNTIWLGE*TGTILLRKANSSDN
Trigger: GTTATCAGAGCTATTGGCTTTACGTAACAATATTGTTCCTGTCCATTCACCCAGCCAAATTGTGTTAAAGAGGAAAGCCCCACAAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR TCA 90 bp ACTTCTCAAGCTATTCTCCCATTTCTCTCTTCCCATTCATTGACATaGTTTCAAAAACCTTCCTACTCATATCTTCCTCCAATGTACTTT +
Preference number: 1 (lower is better)
Translates to: TSQAILPFLSSHSLT*FQKPSYSYLPPMYF
Trigger: AAAGTACATTGGAGGAAGATATGAGTAGGAAGGTTTTTGAAATCATGTCAATGAATGGGAAGAGAGAAATGGGAGAATAGCTTGAGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR GCA 90 bp TATGCCTTTTTCCCCCAGATAAACATCTCTATCAGGAAACTCGGTTaGTCCATAAGAGTAGATCAGTTATTACCTTTCATTTCAAATATG +
Preference number: 1 (lower is better)
Translates to: YAFFPQINISIRKLG*SIRVDQLLPFISNM
Trigger: CATATTTGAAATGAAAGGTAATAACTGATCTACTCTTATGGAGCAACCGAGTTTCCTGATAGAGATGTTTATCTGGGGGAAAAAGGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR CCA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 2 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 2 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 2 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFAGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555387.1
3UTR-3UTR CCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACATCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 2 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR CAA 90 bp ACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTG +
Preference number: 2 (lower is better)
Translates to: TAGHKTFCLPATAGT*PQPWLSFRERCIAV
Trigger: CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGACCGTGGGGTTTGCTGTaGGCACATTACGGAACATGG +
Preference number: 2 (lower is better)
Translates to: ALRALLLLLHERAVALGGPWGLL*AHYGTW
Trigger: CCATGTTCCGTAATGTGCCCACAGCAAACCCCACGG...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR GCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGACATCACAACCATCGCTaGCTTGGTCCGACAAGCAAG +
Preference number: 2 (lower is better)
Translates to: ALRALLLLLHERAVALGGHHNHR*LGPTSK
Trigger: CTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR GCA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: LFLVAALRALLLLLHERATGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 2 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR GCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAGTGTAATGGAAGGTaGACGAGTAGCAATAGGAGG +
Preference number: 2 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRECNGR*TSSNRR
Trigger: CCTCCTATTGCTACTCGTGCACCTTCCATTACACTC...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR CAA 90 bp GGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGATCAGC +
Preference number: 2 (lower is better)
Translates to: GWGLRSRLFILPAGN*GTIPDEEEAVKRIS
Trigger: GCTGATCCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR TCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGATGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 2 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGCRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
3UTR-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 2 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR GCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 2 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAAAGACTATATCAGGCTaGGGTTTGAGATCACGGTTA +
Preference number: 2 (lower is better)
Translates to: ALRALLLLLHERAVALGGKTISG*GLRSRL
Trigger: TAACCGTGATCTCAAACCCCAGCCTGATATAGTCTT...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR TCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR GCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 2 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
3UTR CAA 90 bp AGCAAGACTATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: SKTISGWGLRSRLFI*PAGNLGTIPDEEEA
Trigger: AGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATAGTCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 2 (lower is better)
Translates to: ESWLYTPFHSSSSSDICECRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR GCA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACGAGTGTAATGGAAGGTaGACGAGTAGCAATAGGAGG +
Preference number: 2 (lower is better)
Translates to: PTWAHVLCSHLRRLKWKDECNGR*TSSNRR
Trigger: CCTCCTATTGCTACTCGTGCACCTTCCATTACACTC...GTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR GCA 90 bp AACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTCCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 2 (lower is better)
Translates to: NSRVSSVRMFTRNTPCPCPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...ACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 2 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGTTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CAA 90 bp GGGCCCTACTCACGTGATCCTACCTGCTCTGTGGCTTGGTGTCTCTaGGAATTATTTGCTCTTCTACTTGGGCCATGTAACCACTTCAAA +
Preference number: 2 (lower is better)
Translates to: GPYSRDPTCSVAWCL*ELFALLLGPCNHFK
Trigger: TTTGAAGTGGTTACATGGCCCAAGTAGAAGAGCAAATAATTCCAAGAGACACCAAGCCACAGAGCAGGTAGGATCACGTGAGTAGGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR CCA 90 bp GGGAGTGTAATGGAAGGTGCACGAGTAGCAATAGGAGGGGTAGCTAAAGGGTCTTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 2 (lower is better)
Translates to: GSVMEGARVAIGGVAKGSSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...AGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGCACCTTCCATTACACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTTGTGTGACCTTTTGTaGTTCCATCACGAGTTGAAC +
Preference number: 2 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPLCDLL*FHHELN
Trigger: GTTCAACTCGTGATGGAACCACAAAAGGTCACACAA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR CAA 90 bp TGGATTCCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTATCTGTTACCAAGGAGAAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: WIPTWAHVLCSHLRR*KWKDSYLLPRRRWC
Trigger: ACACCACCTTCTCCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGGAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR GCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTCCGTCACATGAATTTTaGTATGTGTTCAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPPSHEF*YVFSKA
Trigger: TGCTTTGCTGAACACATAGCAAAATTCATGTGACGG...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 2 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPASPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SWLYTPFHSSSSSDICEITLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAAAGTTACACGCACACTaGTCAGAACCAGATAAGGGT +
Preference number: 2 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGKLHAH*SEPDKG
Trigger: ACCCTTATCTGGTTCTGACCAGTGTGCGTGTAACTT...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCCAACCATCGCTGCCTTaGTCCGACAAGCAAGGTAAC +
Preference number: 2 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSQPSLP*SDKQGN
Trigger: GTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTG...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTA +
Preference number: 2 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPLAHRQ*ATEARL
Trigger: TAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAG...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CAA 90 bp TCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCATGTGCT +
Preference number: 2 (lower is better)
Translates to: SGDKDVVVVLLVSET*LGLKSLDSHLGACA
Trigger: AGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR TCA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 2 (lower is better)
Translates to: PTWAHVLCSHLRRLKWKDGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...GTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
3UTR-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 2 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR CAA 90 bp ATGTGTTTTGTACTCTGGCATGACATGGTTGGCTTGTGTGACCTTTaGTGGTTCCATCACGAGTTGAACTCCCCTACTGTCTGGTTTGAT +
Preference number: 2 (lower is better)
Translates to: MCFVLWHDMVGLCDL*WFHHELNSPTVWFD
Trigger: ATCAAACCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCACAAAAGGTCACACAAGCCAACCATGTCATGCCAGAGTACAAAACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR TCA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCAC +
Preference number: 2 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVVKGFP*AIPRYH
Trigger: GTGATATCTGGGTATGGCTCAGGGGAAACCTTTGAC...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR GCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: PESWLYTPFHSSSSSDICRALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 2 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
3UTR-3UTR CCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCAAGTTACACGCACACTaGTCAGAACCAGATAAGGGT +
Preference number: 2 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRKLHAH*SEPDKG
Trigger: ACCCTTATCTGGTTCTGACCAGTGTGCGTGTAACTT...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCC +
Preference number: 2 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSIHFAS*QFGHHP
Trigger: GGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAAT...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATC +
Preference number: 2 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEATFED*SGKTLI
Trigger: GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGC...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCAGTATGTACATAGGTaGCTAAGGAATTATACCAGC +
Preference number: 2 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLQYVHR*LRNYTS
Trigger: GCTGGTATAATTCCTTAGCCACCTATGTACATACTG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR CAA 90 bp CAAATATGCTCGAGTCCTTTGTACTCGACAAAGCAGCCCTTGACCTaGAACTTCTCAAGCTATTCTCCCATTTCTCTCTTCCCATTCATT +
Preference number: 2 (lower is better)
Translates to: QICSSPLYSTKQPLT*NFSSYSPISLFPFI
Trigger: AATGAATGGGAAGAGAGAAATGGGAGAATAGCTTGAGAAGTTCAAGGTCAAGGGCTGCTTTGTCGAGTACAAAGGACTCGAGCATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CAA 90 bp TCATTTCAAATATGCTCGAGTCCTTTGTACTCGACAAAGCAGCCCTaGACCTTGAACTTCTCAAGCTATTCTCCCATTTCTCTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SFQICSSPLYSTKQP*TLNFSSYSPISLFP
Trigger: TGGGAAGAGAGAAATGGGAGAATAGCTTGAGAAGTTCAAGGTCAAGGGCTGCTTTGTCGAGTACAAAGGACTCGAGCATATTTGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CAA 90 bp TTCCTCTTTAACACAATTTGGCTGGGTGAATGGACAGGAACAATATaGTTACGTAAAGCCAATAGCTCTGATAACACCAGCCCTAAACCC +
Preference number: 2 (lower is better)
Translates to: FLFNTIWLGEWTGTI*LRKANSSDNTSPKP
Trigger: GGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTTTACGTAACAATATTGTTCCTGTCCATTCACCCAGCCAAATTGTGTTAAAGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR TCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 2 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTA +
Preference number: 2 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLLRRLK*KDSYLL
Trigger: TAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
3UTR-3UTR TCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCTTATCATCCGTCACATaGATTTTGCTATGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSLSSVT*ILLCVQ
Trigger: CTGAACACATAGCAAAATTCATGTGACGGATGATAA...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 2 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 2 (lower is better)
Translates to: PESWLYTPFHSSSSSDICHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTATTTGGCTGGGTGAATaGACAGGAACAATATTGTTA +
Preference number: 2 (lower is better)
Translates to: PESWLYTPFHSSSSSDICIWLGE*TGTILL
Trigger: TAACAATATTGTTCCTGTCCATTCACCCAGCCAAAT...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR TCA 90 bp CTAGATTACAGTGAAGAACAAAGGGTAGATGGATTATCCAATTGGCCAAGTAAGAAGAAATTGTATATCTaGCCCTCCAGAGGACACACT +
Preference number: 2 (lower is better)
Translates to: LDYSEEQRVDGLSNWPSKKKLYI*PSRGHT
Trigger: AGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTT...CTTACTTGGCCAATTGGATAATCCATCTACCCTTTGTTCTTCACTGTAATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR GCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHRALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGTCTGAAATTAGATCCTaGGGGACCAGCTTTTCGAAT +
Preference number: 2 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSSEIRS*GTSFSN
Trigger: ATTCGAAAAGCTGGTCCCCCAGGATCTAATTTCAGA...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR CAA 90 bp TCTGTAGCAATATGTCAGTTTCTGATCCCATTCTCTCCAAGAAGATaGACTTATGCCTTTTTCCCCCAGATAAACATCTCTATCAGGAAA +
Preference number: 2 (lower is better)
Translates to: SVAICQFLIPFSPRR*TYAFFPQINISIRK
Trigger: TTTCCTGATAGAGATGTTTATCTGGGGGAAAAAGGCATAAGTCAATCTTCTTGGAGAGAATGGGATCAGAAACTGACATATTGCTACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CAA 90 bp ATTCACTCTACTCATTTAATACATCTCCCAAGATCTGAGCATGCATaGCTTTTAGCTGTTGTTGTCTTATATGCCCTCACTCTCATGCAA +
Preference number: 2 (lower is better)
Translates to: IHSTHLIHLPRSEHA*LLAVVVLYALTLMQ
Trigger: TTGCATGAGAGTGAGGGCATATAAGACAACAACAGCTAAAAGCAATGCATGCTCAGATCTTGGGAGATGTATTAAATGAGTAGAGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR GCA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGCCGTCACATGAATTTTaGTATGTGTTCAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSPSHEF*YVFSKA
Trigger: TGCTTTGCTGAACACATAGCAAAATTCATGTGACGG...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATAGAGAAGTGAGCAAATaGAAGGACAGAGTTATCCAT +
Preference number: 2 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDREVSK*KDRVIH
Trigger: ATGGATAACTCTGTCCTTCCATTTGCTCACTTCTCT...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CCA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTTTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CAA 90 bp AATCCAAATTATGGTTTTGATCCTGCTTGCTCCCACTTTAAGGGTTaGCTTAGAATGATATACAGCCCTTATTTCTGCCTATCAGTTTTC +
Preference number: 2 (lower is better)
Translates to: NPNYGFDPACSHFKG*LRMIYSPYFCLSVF
Trigger: GAAAACTGATAGGCAGAAATAAGGGCTGTATATCATTCTAAGCAAACCCTTAAAGTGGGAGCAAGCAGGATCAAAACCATAATTTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR TCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 2 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR TCA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCACACCATGATAGCTTTTaGGTTCATATGGCAATAGTC +
Preference number: 2 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAHHDSF*VHMAIV
Trigger: GACTATTGCCATATGAACTCAAAAGCTATCATGGTG...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR CAA 90 bp TTATGCCTTTTTCCCCCAGATAAACATCTCTATCAGGAAACTCGGTaGCTCCATAAGAGTAGATCAGTTATTACCTTTCATTTCAAATAT +
Preference number: 2 (lower is better)
Translates to: LCLFPPDKHLYQETR*LHKSRSVITFHFKY
Trigger: ATATTTGAAATGAAAGGTAATAACTGATCTACTCTTATGGAGCAACCGAGTTTCCTGATAGAGATGTTTATCTGGGGGAAAAAGGCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR CAA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGACGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 3 (lower is better)
Translates to: ALRALLLLLHERAVALGGRRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR TCA 72 bp TCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SQRPLGPCRSRG*ALERDASLCVC
Trigger: ACACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR CCA 72 bp TGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: CLPATAGTLPQP*LSFRERCIAVC
Trigger: ACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CAA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 3 (lower is better)
Translates to: LFLVAALRALLLLLHERARRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CAA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: PESWLYTPFHSSSSSDICATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CAA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555387.1
3UTR-3UTR CAA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGATCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 3 (lower is better)
Translates to: ALRALLLLLHERAVALGGSRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR GCA 72 bp GTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGCACAAAACCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: VEPPSGSRALSV*FMIQQGTKPSV
Trigger: GACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR GCA 72 bp CAGATATCACCAAGCCATCATCATCACAACCATCGCTaGCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAG +
Preference number: 3 (lower is better)
Translates to: QISPSHHHHNHR*LGPTSKVTPPQ
Trigger: CTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATGGCTTGGTGATATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CAA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CAA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR-3UTR CAA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCCCGGCTCCGTGGGGTTaGCTGTGGGCACATTACGGA +
Preference number: 3 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPPAPWG*LWAHYG
Trigger: TCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGG...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CCA 72 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCCAGACGAGGAGGAAGC +
Preference number: 3 (lower is better)
Translates to: LGFEITVIHFAS*QFGHHPRRGGS
Trigger: GCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CCA 72 bp GGCTCTTCAGTTTGGTGCTGTCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTATATCAGGCTGGGGTT +
Preference number: 3 (lower is better)
Translates to: GSSVWCCLAHRQ*ATEARLYQAGV
Trigger: AACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CAA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGCTTGGACAAATAGAATaGCCACATTCTTGTAACTTG +
Preference number: 3 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWLGQIE*PHSCNL
Trigger: CAAGTTACAAGAATGTGGCAATTCTATTTGTCCAAG...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CAA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGTTAGGTCTAAAGTCCTaGGATTCCCACTTGGGCGCA +
Preference number: 3 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRLGLKS*DSHLGA
Trigger: TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAA...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CCA 72 bp CTCTGGCATGACATGGTTGGCTTGTGTGACCTTTTGTaGTTCCATCACGAGTTGAACTCCCCTACTGTCTGG +
Preference number: 3 (lower is better)
Translates to: LWHDMVGLCDLL*FHHELNSPTVW
Trigger: CCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCACAAAAGGTCACACAAGCCAACCATGTCATGCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CAA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGTCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 3 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVSRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555387.1
3UTR TCA 72 bp ATCAGTAGGGGGCAGGTTAGAGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCACCAAGCCATCATCATC +
Preference number: 3 (lower is better)
Translates to: ISRGQVRVKGFP*AIPRYHQAIII
Trigger: GATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCCTACTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR GCA 72 bp CTCTTCTATCCTGGGCCCTACTCACGTGATCCTACCTaGTCTGTGGCTTGGTGTCTCTTGGAATTATTTGCT +
Preference number: 3 (lower is better)
Translates to: LFYPGPYSRDPT*SVAWCLLELFA
Trigger: AGCAAATAATTCCAAGAGACACCAAGCCACAGAGCAGGTAGGATCACGTGAGTAGGGCCCAGGATAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CCA 72 bp ATCTTTTCATTAGCGCCTTCCTACTGGTGCTGTCAGTaGACTGCTGCCATTAATCACTCACGGTCCCACTTG +
Preference number: 3 (lower is better)
Translates to: IFSLAPSYWCCQ*TAAINHSRSHL
Trigger: CAAGTGGGACCGTGAGTGATTAATGGCAGCAGTCCACTGACAGCACCAGTAGGAAGGCGCTAATGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CCA 72 bp ATCCTGGGCCCTACTCACGTGATCCTACCTGCTCTGTaGCTTGGTGTCTCTTGGAATTATTTGCTCTTCTAC +
Preference number: 3 (lower is better)
Translates to: ILGPTHVILPAL*LGVSWNYLLFY
Trigger: GTAGAAGAGCAAATAATTCCAAGAGACACCAAGCCACAGAGCAGGTAGGATCACGTGAGTAGGGCCCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR CAA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCCTTGGACAAATAGAATaGCCACATTCTTGTAACTTG +
Preference number: 3 (lower is better)
Translates to: LFLVAALRALLLLLHERALGQIE*PHSCNL
Trigger: CAAGTTACAAGAATGTGGCAATTCTATTTGTCCAAG...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CAA 90 bp GAGGAGGAAGCTGTGAAGCGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTG +
Preference number: 3 (lower is better)
Translates to: EEEAVKRISSGDKDVVVVLVSET*LGLKSL
Trigger: CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG...GACTACTACCACATCTTTATCCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CAA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCTCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 3 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR TCA 72 bp TGGGCAACGGAAGCAAGACTATATCAGGCTGGGGTTTaGGATCACGGTTATTCATTTTGCCAGCTGGCAATT +
Preference number: 3 (lower is better)
Translates to: WATEARLYQAGV*DHGYSFCQLAI
Trigger: AATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CCA 72 bp GCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTACCAAGGAGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: AHVLCSHLRRLK*KDSYLLPRRRW
Trigger: CCACCTTCTCCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR-3UTR CAA 90 bp AACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTAT +
Preference number: 3 (lower is better)
Translates to: NSRVSSVRMFTRNTPCPCSHLRR*KWKDSY
Trigger: ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCT...ACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR TCA 72 bp CTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATCTGTTACCAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: LGRMCFVATFED*SGKTLICYQGE
Trigger: TTCTCCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR GCA 72 bp TATTTAGAGATCTTTTCATTAGCGCCTTCCTACTGGTaGTGTCAGTGGACTGCTGCCATTAATCACTCACGG +
Preference number: 3 (lower is better)
Translates to: YLEIFSLAPSYW*CQWTAAINHSR
Trigger: CCGTGAGTGATTAATGGCAGCAGTCCACTGACAGCACCAGTAGGAAGGCGCTAATGAAAAGATCTCTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGTGGTTCCATCACGAGTaGAACTCCCCTACTGTCTGG +
Preference number: 3 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSWFHHE*NSPTVW
Trigger: CCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCA...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR TCA 72 bp TTGGCTTGTGTGACCTTTTGTGGTTCCATCACGAGTTaGACTCCCCTACTGTCTGGTTTGATAACAGACTTT +
Preference number: 3 (lower is better)
Translates to: LACVTFCGSITS*TPLLSGLITDF
Trigger: AAAGTCTGTTATCAAACCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCACAAAAGGTCACACAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR CCA 72 bp TTCCGGGTTTGGGTGGTAAATTCTGAAATTAGATCCTaGGGGACCAGCTTTTCGAATCAATTTATCATCCGT +
Preference number: 3 (lower is better)
Translates to: FRVWVVNSEIRS*GTSFSNQFIIR
Trigger: ACGGATGATAAATTGATTCGAAAAGCTGGTCCCCCAGGATCTAATTTCAGAATTTACCACCCAAACCCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CAA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTGGACAGGAACAATATaGTTACGTAAAGCCAATAGC +
Preference number: 3 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEWTGTI*LRKANS
Trigger: GCTATTGGCTTTACGTAACAATATTGTTCCTGTCCA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR TCA 72 bp TACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGA +
Preference number: 3 (lower is better)
Translates to: YRLTWSYGTSKP*SLLPFSKRSSG
Trigger: TCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR TCA 72 bp ATCCTGCTTGCTCCCACTTTAAGGGTTTGCTTAGAATaGTATACAGCCCTTATTTCTGCCTATCAGTTTTCC +
Preference number: 3 (lower is better)
Translates to: ILLAPTLRVCLE*YTALISAYQFS
Trigger: GGAAAACTGATAGGCAGAAATAAGGGCTGTATATCATTCTAAGCAAACCCTTAAAGTGGGAGCAAGCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR GCA 72 bp AATACATTTCAGTTGTCTACCCAGCCTGTGGTATTTTaGCAGGGTAATCCCAGTAGACTAACACAATATCCT +
Preference number: 3 (lower is better)
Translates to: NTFQLSTQPVVF*QGNPSRLTQYP
Trigger: AGGATATTGTGTTAGTCTACTGGGATTACCCTGGCAAAATACCACAGGCTGGGTAGACAACTGAAATGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGGCTACCATTTAGATaGCACTTTTTGCCCCATGTC +
Preference number: 3 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSRLPFR*HFLPHV
Trigger: GACATGGGGCAAAAAGTGCAATCTAAATGGTAGCCT...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR TCA 72 bp CTAACAAACTTTGATCTGCAACTTTGTTTCTGGAACTaGGAAATACATTTCAGTTGTCTACCCAGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: LTNFDLQLCFWN*EIHFSCLPSLW
Trigger: CCACAGGCTGGGTAGACAACTGAAATGTATTTCTCAGTTCCAGAAACAAAGTTGCAGATCAAAGTTTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR TCA 72 bp GAAATCTCTCAGTGCATGAACAGAAGAAAGGCCCTGTaGGTACATAGTGAGAAGGTAGCTTATTATCTACAA +
Preference number: 3 (lower is better)
Translates to: EISQCMNRRKAL*VHSEKVAYYLQ
Trigger: TTGTAGATAATAAGCTACCTTCTCACTATGTACTCACAGGGCCTTTCTTCTGTTCATGCACTGAGAGATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CCA 72 bp GTTTTAGTTTGTGGGGCTTTCCTCTTTAACACAATTTaGCTGGGTGAATGGACAGGAACAATATTGTTACGT +
Preference number: 3 (lower is better)
Translates to: VLVCGAFLFNTI*LGEWTGTILLR
Trigger: ACGTAACAATATTGTTCCTGTCCATTCACCCAGCCAAATTGTGTTAAAGAGGAAAGCCCCACAAACTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR-3UTR CAA 90 bp CTAGATTACAGTGAAGAACAAAGGGTAGATGGATTATCCAATTGGCCAAGTAAGAAAGAACTATGTGTTTaGTACTCTGGCATGACATGG +
Preference number: 3 (lower is better)
Translates to: LDYSEEQRVDGLSNWPSKKELCV*YSGMTW
Trigger: CCATGTCATGCCAGAGTACAAAACACATAGTTCTTT...CTTACTTGGCCAATTGGATAATCCATCTACCCTTTGTTCTTCACTGTAATCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR TCA 72 bp AGGCTTAAAATCCTTCTAGCCATTTTCTGCCTTCATTaGAACAAAGTAACAATAGCCAATAGTAGACTAGCT +
Preference number: 3 (lower is better)
Translates to: RLKILLAIFCLH*NKVTIANSRLA
Trigger: AGCTAGTCTACTATTGGCTATTGTTACTTTGTTTCAATGAAGGCAGAAAATGGCTAGAAGGATTTTAAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCCTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSLPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALLPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTCAACGTGGCACGGGGTaGAGGGAGGTGGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSQRGTG*REVGGR
Trigger: TCGCCCACCCACCTCCCTCCACCCCGTGCCACGTTG...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAESPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTATCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACCAGGCCTGCGGAAGTaGTGGAGCCACCGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALPGLRK*WSHRPA
Trigger: AGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCGGCACAGTCCATGCTaGAGCGGAGCTGAACGCGGC +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFRHSPC*SGAERG
Trigger: GCCGCGTTCAGCTCCGCTTCAGCATGGACTGTGCCG...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTTGCCCGTGTGCAGGATaGGGCCGTTACGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFACPCAG*GRYAAR
Trigger: CCTGGCAGCGTAACGGCCTCATCCTGCACACGGGCA...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTACGGAGCCCCGGCATaGCACGCATGTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCYGAPA*HACQGK
Trigger: CTTCCCCTGACATGCGTGGCATGCCGGGGCTCCGTA...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGCTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWLPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCGAGCGCAAGAGGAGGTaGCTGGCAGGCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSERKRR*LAGCRG
Trigger: ACCTCTGCAGCCTGCCAGGCACCTCCTCTTGCGCTC...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR GCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTGGAGCTCATTGTCGCTaGTGGGACAGAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELGAHCR*WDRARR
Trigger: CCTCCGGGCTCTGTCCCAGCAGCGACAATGAGCTCC...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCAAGCATCAGCACCGTaGGCAGGCGGTCACGGCTCA +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAEQASAP*AGGHGS
Trigger: TGAGCCGTGACCGCCTGCGCACGGTGCTGATGCTTG...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTGCTGAGGCAGGAGAATaGTGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFAEAGE*CEPGRR
Trigger: CCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGC...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTGCTCATTGTCGCTGCTaGGACAGAGCCCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELAHCRC*DRARRS
Trigger: GCTCCTCCGGGCTCTGTCCCAGCAGCGACAATGAGC...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LFLVAALRALLLLLHERAPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAACTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: LPWSDKQGNPASEVMDRELPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...TTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGTGGGCCCTACTCACGTaGTCCTACCTGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAEWALLT*SYLLCG
Trigger: GCCACAGAGCAGGTAGGATCACGTGAGTAGGGCCCA...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTTGGGCCCTACTCACGTaGTCCTACCTGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFWALLT*SYLLCG
Trigger: GCCACAGAGCAGGTAGGATCACGTGAGTAGGGCCCA...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTACGAGGAGGAAGCTGTaGAGCGGATCAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFATRRKL*SGSAQG
Trigger: CCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTCGT...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAARQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGAGAAGCCTTCAGCGATaGACTCCTCCCAGCGGACCC +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAERSLQR*TPPSGP
Trigger: GGGTCCGCTGGGAGGAGTGCATCGCTGAAGGCTTCT...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCGGCTCCGTGGGGTTTaGTGTGGGCACATTACGGAA +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCRLRGV*CGHITE
Trigger: TTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCTTCTTCGGGTGTTCCTaGGAGTCTCCGCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSFFGCS*ESPRKG
Trigger: GCCCTTCCGCGGAGACTCCCAGGAACACCCGAAGAA...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTGGGCTCCGTCTCGCGTaGATTCTCAGGTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELGLRLA*ILRCMV
Trigger: GACCATGCACCTGAGAATCCACGCGAGACGGAGCCC...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCCCTCGGCATCCATCTaGACACCCCGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAPSASI*TPRLPR
Trigger: TCTGGGGAGCCGGGGTGTCCAGATGGATGCCGAGGG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACCCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCCTTCAGAGCCAGGTTaGCATAGTCAGCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCPSEPG*HSQPTC
Trigger: GCAAGTCGGCTGACTATGTCAACCTGGCTCTGAAGG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGAGAGGCCTTCTaGGCAGAGCTTGCCACCATA +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFAVGEAF*AELATI
Trigger: TATGGTGGCAAGCTCTGCTCAGAAGGCCTCTCCCAC...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCAGGCAAAAGGGGGCTaGAGGTGGAAGAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCQAKGG*RWKSSS
Trigger: CGAAGAACTCTTCCACCTGCAGCCCCCTTTTGCCTG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCGCGTGGATTCTCAGGTaGATGGTCAACGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSAWILR*MVNARD
Trigger: GTCCCGTGCGTTGACCATGCACCTGAGAATCCACGC...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCLEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAATGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCTGCCGGCCTTTTTCCTaGAGCCACTCCTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSCRPFS*SHSSTG
Trigger: GCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCA...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR CCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTCCGGCGAGGAAGAGGTaGAGGAGGAGGAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSPARKR*RRRKLH
Trigger: ATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGASPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCAGACTCAGGCTTCATaGTGCGGCCAGAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAAQTQAS*CGQKQC
Trigger: GCACTGCTTCTGGCCGCACCATGAAGCCTGAGTCTG...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCACGACATTGTGCCACTaGTTGTCATTCAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCTTLCH*LSFRGR
Trigger: CCGCCCCCTGAATGACAACCAGTGGCACAATGTCGT...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGTGCCAGCTGGCAATTTaGGCACCATCCCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRACQLAI*APSQTR
Trigger: CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCA...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATCCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCCCAGAATTAACCCCTTaGAGCCGGGCATGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSPELTP*SRAWPE
Trigger: TTCAGGCCATGCCCGGCTTCAAGGGGTTAATTCTGG...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTTCCACTTGGGCAAGCTaGTGTAAGCCTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFASTWAS*CKPLGS
Trigger: AGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGA...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTGGGGCTTTCCATGAGTaGAGAGGATCAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELGAFHE*RGSGHW
Trigger: CCAATGGCCTGATCCTCTTCACTCATGGAAAGCCCC...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCAAGGGCGGCACGGAGTaGTCTAGCTGCATTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAAKGGTE*SSCIRA
Trigger: AGCTCTAATGCAGCTAGATCACTCCGTGCCGCCCTT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR GCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTCAGGCAAAAGGGGGCTaGAGGTGGAAGAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSQAKGG*RWKSSS
Trigger: CGAAGAACTCTTCCACCTGCAGCCCCCTTTTGCCTG...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGGATGCAATGCAGAACTaGCAGGCAAAAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRADAMQN*QAKGGC
Trigger: GCAGCCCCCTTTTGCCTGGCAGTTCTGCATTGCATC...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTGATGCAATGCAGAACTaGCAGGCAAAAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFDAMQN*QAKGGC
Trigger: GCAGCCCCCTTTTGCCTGGCAGTTCTGCATTGCATC...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTCGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTCTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSLEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGGCGCCTTCCTACTGGTaGTGTCAGTGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPAPSYW*CQWTAA
Trigger: GGCAGCAGTCCACTGACAGCACCAGTAGGAAGGCGC...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGCTGCCCATAACTTaGCTCCCAGGACTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFAVLPIT*LPGLQR
Trigger: TCTCTGGAGTCCTGGGAGGCAAGTTATGGGCAGCAC...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGCAGCAAGTACAGGTTaGCATCGAGGAGTTCCACGG +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAAAASTG*HRGVPR
Trigger: CCGTGGAACTCCTCGATGGCAACCTGTACTTGCTGC...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGCAGCAAGTACAGGTTaGCATCGAGGAGTTCCACGG +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSAASTG*HRGVPR
Trigger: CCGTGGAACTCCTCGATGGCAACCTGTACTTGCTGC...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCCGAGCTTTGGGAGGTTaGTGTACATGCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSRALGG*CTCLGP
Trigger: TGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCG...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCAAAGGGGGCTGCAGGTaGAAGAGTTCTTCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCKGGCR*KSSSGV
Trigger: AACACCCGAAGAACTCTTCCACCTGCAGCCCCCTTT...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGGGATTCTCAGGTGCATaGTCAACGCACGGGACCACT +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAEGFSGA*STHGTT
Trigger: AGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCC...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTGGATTCTCAGGTGCATaGTCAACGCACGGGACCACT +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFGFSGA*STHGTT
Trigger: AGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCC...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGGGGCTCCGTCTCGCGTaGATTCTCAGGTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVGLRLA*ILRCMV
Trigger: GACCATGCACCTGAGAATCCACGCGAGACGGAGCCC...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGGGCTCCGTCTCGCGTaGATTCTCAGGTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWGLRLA*ILRCMV
Trigger: GACCATGCACCTGAGAATCCACGCGAGACGGAGCCC...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTCCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGCTGAGGCAGGAGAATaGTGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYAEAGE*CEPGRR
Trigger: CCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGC...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTAGCGCCTTCCTACTaGTGCTGTCAGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCLAPSY*CCQWTA
Trigger: AGCAGTCCACTGACAGCACCAGTAGGAAGGCGCTAA...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCAGAGGCCACGAGCTTTaGGAGGTTGCTGTACATGCC +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAARGHEL*EVAVHA
Trigger: GGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCCTGGCAGGTGGTACTaGGTCCTTCACAGCCACGCT +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAPGRWY*VLHSHA
Trigger: AGCGTGGCTGTGAAGGACCCAGTACCACCTGCCAGG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCCGTGGGGTTTGCTGTaGGCACATTACGGAACATGG +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFPWGLL*AHYGTW
Trigger: CCATGTTCCGTAATGTGCCCACAGCAAACCCCACGG...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAGGTTTCCCAACTGGATaGAAACCAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALGFPTG*KPAAAA
Trigger: TGCTGCTGCTGCTGGTTTTCATCCAGTTGGGAAACC...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR TCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGTTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTTTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIASGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPAGNLGTIPDEEEAVKRAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...CCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIACRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPCRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCTGGGGTCTCAAAGTTaGTGGGGTCCAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPLGSQS*WGPVWP
Trigger: TGGCCACACTGGACCCCATCAACTTTGAGACCCCAG...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGAGCAGGAGGAAGAGTTaGCAGAATTCGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAESRRKS*QNSGKR
Trigger: CCTCTTCCCCGAATTCTGGCAACTCTTCCTCCTGCT...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGCGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: HHNHRCLGPTSKVTPPQRRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...CCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAGTTGCTTGCCGGCCTTTTTCCTaGAGCCACTCCTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: RALLLLLHERAVALGGVACRPFS*SHSSTG
Trigger: GCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCA...AGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGCCACCCAAACCAACGTaGCACGGGGTGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVPPKPT*HGVEGG
Trigger: ACCTCCCTCCACCCCGTGCCACGTTGGTTTGGGTGG...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCTGGGTTTCCCAACTaGATGAAAACCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSPGFPN*MKTSSS
Trigger: GCTGCTGCTGGTTTTCATCCAGTTGGGAAACCCAGG...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTAAAGGGGGCTGCAGGTaGAAGAGTTCTTCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELKGGCR*KSSSGV
Trigger: AACACCCGAAGAACTCTTCCACCTGCAGCCCCCTTT...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCAGCCCGAACCCAAGTaGGTTCAGGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAQPEPK*VQVSLS
Trigger: GGATAAACTCACCTGAACCCACTTGGGTTCGGGCTG...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCAGCCCGAACCCAAGTaGGTTCAGGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAAQPEPK*VQVSLS
Trigger: GGATAAACTCACCTGAACCCACTTGGGTTCGGGCTG...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAACCAGGCCTGCGGAAGTaGTGGAGCCACCGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKPGLRK*WSHRPA
Trigger: AGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGG...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTCCAGGCCTGCGGAAGTaGTGGAGCCACCGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSPGLRK*WSHRPA
Trigger: AGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGG...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGAAAGCAGGTCCTTGGTaGCTGGAGATGCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVKAGPW*LEMPRL
Trigger: CAGCCTCGGCATCTCCAGCCACCAAGGACCTGCTTT...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCCCACTGGCGGTGAATaGCGTGCGCCTGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQPTGGE*RAPAVH
Trigger: GTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGG...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCGCACATGAATCTTCCTaGCAGGTGGTACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSAHESS*QVVLGP
Trigger: AGGACCCAGTACCACCTGCCAGGAAGATTCATGTGC...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCTTGGATTCCCACTTaGGCGCATGTGCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSPWIPT*AHVLCS
Trigger: GCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGG...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGTGCCAGCTGGCAATTTaGGCACCATCCCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWCQLAI*APSQTR
Trigger: CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCA...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCCCGTGGGGTTTGCTGTaGGCACATTACGGAACATGG +
Preference number: 4 (lower is better)
Translates to: AALRALLLLLHERAVALGPWGLL*AHYGTW
Trigger: CCATGTTCCGTAATGTGCCCACAGCAAACCCCACGG...GCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCAACCATCGCTGCCTTaGTCCGACAAGCAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAQPSLP*SDKQGN
Trigger: GTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTG...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR CAA 72 bp CACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: HKTFCLPATAGT*PQPWLSFRERC
Trigger: GCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFAFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTATCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALSSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSSSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAASSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTCTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATALPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCCCAACCCCAAACATaGCTGTATTGGGAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELSQPQT*LYWEVV
Trigger: CACTACCTCCCAATACAGTCATGTTTGGGGTTGGGA...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAGTTGCTCCAGAATTAACCCCTTaGAGCCGGGCATGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: RALLLLLHERAVALGGVAPELTP*SRAWPE
Trigger: TTCAGGCCATGCCCGGCTTCAAGGGGTTAATTCTGG...AGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATTGCTGCGCCCATCAATaGATAGGTCGCGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYCCAHQ*IGRGCS
Trigger: GCTGCATCCGCGACCTATTCATTGATGGGCGCAGCA...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAAAGGGCGGCACGGAGTaGTCTAGCTGCATTAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALRALLLLLHERAVALGGKGGTE*SSCIRA
Trigger: AGCTCTAATGCAGCTAGATCACTCCGTGCCGCCCTT...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR TCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCCAGGGAGGCACAGGTaGAGTGAAGCGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQPGRHR*SEARSW
Trigger: CCAACTCCTCGCTTCACTTCACCTGTGCCTCCCTGG...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557594.5
CDS-3UTR GCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGCGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCRALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCGCGCCTTCCTACTGGTaGTGTCAGTGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAAPSYW*CQWTAA
Trigger: GGCAGCAGTCCACTGACAGCACCAGTAGGAAGGCGC...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATCAGCTAGAAGCCCAATaGTCAGACAGAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYQLEAQ*SDRAGP
Trigger: GGGCCCTGCTCTGTCTGAGCATTGGGCTTCTAGCTG...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGACACCCGCAGCATTCTaGATCTCTGCCAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPTPAAF*ISASCR
Trigger: TCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGT...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCTCCTCTGCCTCAGTATaGATGACCATGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSSSASV*MTMGMM
Trigger: CATCATGCCCATGGTCATGCATACTGAGGCAGAGGA...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCTCCTCTGCCTCAGTATaGATGACCATGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAASSASV*MTMGMM
Trigger: CATCATGCCCATGGTCATGCATACTGAGGCAGAGGA...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGATTGAGCTTCTGCCCTaGATACAAGGTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAIELLP*IQGLWS
Trigger: GGACCAGAGACCTTGTATGCAGGGCAGAAGCTCAAT...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTAAGCCCTCCCATTGTTaGATGCAGACCCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAKPSHC*MQTPWL
Trigger: CAACCAGGGGGTCTGCATGCAACAATGGGAGGGCTT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATTGCCGGCCTTTTTCCTaGAGCCACTCCTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYCRPFS*SHSSTG
Trigger: GCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCA...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGATCGGCTCCGTGGGGTTTaGTGTGGGCACATTACGGAA +
Preference number: 4 (lower is better)
Translates to: ASWQFGHHPRRGGSCEADRLRGV*CGHITE
Trigger: TTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCG...ATCCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATCGGCTCCGTGGGGTTTaGTGTGGGCACATTACGGAA +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYRLRGV*CGHITE
Trigger: TTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCG...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: ALRALLLLLHERAVALGGEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGACCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ALRALLLLLHERAVALGGPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIATLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCACTCACGGTCCCACTTaGGTATCTGACCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSTHGPT*VSDLVL
Trigger: AAGGACAAGGTCAGATACCCAAGTGGGACCGTGAGT...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCCTCGGCATCCATCTaGACACCCCGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVPSASI*TPRLPR
Trigger: TCTGGGGAGCCGGGGTGTCCAGATGGATGCCGAGGG...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACACGACATTGTGCCACTaGTTGTCATTCAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNTTLCH*LSFRGR
Trigger: CCGCCCCCTGAATGACAACCAGTGGCACAATGTCGT...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFLAHRQ*ATEARL
Trigger: TAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAG...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCGTGGGCTCTTCAGTTTaGTGCTGTCTAGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSVGSSV*CCLAHR
Trigger: CCTATGAGCTAGACAGCACCAAACTGAAGAGCCCAC...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAGTGGGCTCTTCAGTTTaGTGCTGTCTAGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALVGSSV*CCLAHR
Trigger: CCTATGAGCTAGACAGCACCAAACTGAAGAGCCCAC...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCCGTGGGGTTTGCTGTaGGCACATTACGGAACATGG +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVPWGLL*AHYGTW
Trigger: CCATGTTCCGTAATGTGCCCACAGCAAACCCCACGG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGTCTCTTTCCCGGAGCTaGAATTTAGAATGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAESLSRS*NLECQG
Trigger: ACCCTGGCATTCTAAATTTCAGCTCCGGGAAAGAGA...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCAACTCCATACAGAGCTaGCGATACATCCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSNSIQS*RYIPRT
Trigger: TGTTCTGGGGATGTATCGTCAGCTCTGTATGGAGTT...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTAACTCCATACAGAGCTaGCGATACATCCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELNSIQS*RYIPRT
Trigger: TGTTCTGGGGATGTATCGTCAGCTCTGTATGGAGTT...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCAACTCCATACAGAGCTaGCGATACATCCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAANSIQS*RYIPRT
Trigger: TGTTCTGGGGATGTATCGTCAGCTCTGTATGGAGTT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GGRLESKVSPEPYPDITKPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LFLVAALRALLLLLHERASGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQSGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGGGTTCCATCACGAGTTaGACTCCCCTACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVGSITS*TPLLSG
Trigger: ACCAGACAGTAGGGGAGTTCAACTCGTGATGGAACC...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCGCCTTGCCAACATGGTaGAACCCTTCCTTACTAAAA +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCALPTW*NPSLLK
Trigger: TTTTAGTAAGGAAGGGTTTCACCATGTTGGCAAGGC...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGCCCGTGTGCAGGATaGGGCCGTTACGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFCPCAG*GRYAAR
Trigger: CCTGGCAGCGTAACGGCCTCATCCTGCACACGGGCA...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAGTTGCTTCTTGGGGCTTTCCATaGGTGAAGAGGATCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RALLLLLHERAVALGGVASWGFP*VKRIRP
Trigger: TGGCCTGATCCTCTTCACTCATGGAAAGCCCCAAGA...AGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCAATGAAGCCATCTGGTaGGGTGGTCTTGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSNEAIW*GGLELE
Trigger: TTCCAGTTCAAGACCACCTCACCAGATGGCTTCATT...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGATGCTAGACAGCCCTaGAAGCCATCTCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LFLVAALRALLLLLHERADARQP*KPSREA
Trigger: GGCCTCTCGAGATGGCTTTCAGGGCTGTCTAGCATC...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGCGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HHNHRCLGPTSKVTPPQRRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...CCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAACTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: LPWSDKQGNPASEVMDRELEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...TTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PWSDKQGNPASEVMDRESTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGACTCAGGCTTCATGGTaGGGCCAGAAGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVTQASW*GQKQCC
Trigger: GCAGCACTGCTTCTGGCCGCACCATGAAGCCTGAGT...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACATGAGGCCGTTACGCTaGCAGGTCTTAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNMRPLR*QVLKER
Trigger: CCTCTCCTTTAAGACCTGGCAGCGTAACGGCCTCAT...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTGTCATTGAGCTTCTaGCCTGCATACAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCLSLSF*PAYKVS
Trigger: AGAGACCTTGTATGCAGGGCAGAAGCTCAATGACAA...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATCGAGCTTTGGGAGGTTaGTGTACATGCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYRALGG*CTCLGP
Trigger: TGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCG...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGCTCTTCAGTTTGGTaGTGTCTAGCTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: AALRALLLLLHERAVALGGSSVW*CLAHRQ
Trigger: CTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCC...GCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTGTGGAGGGAGGTGGGTaGGCGAAATCAGCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPVEGGG*AKSARA
Trigger: CGCTCTCGCTGATTTCGCCCACCCACCTCCCTCCAC...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCCGGCGAGGAAGAGGTaGAGGAGGAGGAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQPARKR*RRRKLH
Trigger: ATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGAGTAGACATTTCTGGTaGCATGGAGGTCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRASRHFW*HGGRLC
Trigger: ACACAGACGACCTCCATGCCACCAGAAATGTCTACT...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCAGTAGACATTTCTGGTaGCATGGAGGTCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSSRHFW*HGGRLC
Trigger: ACACAGACGACCTCCATGCCACCAGAAATGTCTACT...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCAGTAGACATTTCTGGTaGCATGGAGGTCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSSRHFW*HGGRLC
Trigger: ACACAGACGACCTCCATGCCACCAGAAATGTCTACT...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAESSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAASSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGAAACCGAGTGGAGTGTaGAGCTCATTGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVKPSGV*SSLSLL
Trigger: CAGCAGCGACAATGAGCTCCACACTCCACTCGGTTT...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCAAGTCAGCGGTACTTaGGCTTCCTCCTACATAGAA +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSQVSGT*ASSYIE
Trigger: TTCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTG...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAACCCACTGGCGGTGAATaGCGTGCGCCTGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKPTGGE*RAPAVH
Trigger: GTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGG...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCCCGTTTCAATGTTGTaGAACTCCAAACGGGTATGG +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAPVSML*NSKRVW
Trigger: CCATACCCGTTTGGAGTTCCACAACATTGAAACGGG...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTATGAGGCTCTGCAGATaGCCAATAAAGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAMRLCR*PIKLEG
Trigger: CCCCTCCAGCTTTATTGGCCATCTGCAGAGCCTCAT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGAATCTTCCTGGCAGGTaGTACTGGGTCCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWNLPGR*YWVLHS
Trigger: GCTGTGAAGGACCCAGTACCACCTGCCAGGAAGATT...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGCACATGAATCTTCCTaGCAGGTGGTACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAAHESS*QVVLGP
Trigger: AGGACCCAGTACCACCTGCCAGGAAGATTCATGTGC...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCCTTGGATTCCCACTTaGGCGCATGTGCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVPWIPT*AHVLCS
Trigger: GCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAEIHFAS*QFGHHP
Trigger: GGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAAT...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRACCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAACCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGSGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCATATATCCAGAACACTaGAGCCCTCTGACTACAGCT +
Preference number: 4 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSIYPEH*SPLTTA
Trigger: AGCTGTAGTCAGAGGGCTTCAGTGTTCTGGATATAT...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTATATATCCAGAACACTaGAGCCCTCTGACTACAGCT +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSIYPEH*SPLTTA
Trigger: AGCTGTAGTCAGAGGGCTTCAGTGTTCTGGATATAT...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGACATCTCCCAAGATCTaGGCATGCATTGCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAETSPKI*ACIAFS
Trigger: GCTAAAAGCAATGCATGCTCAGATCTTGGGAGATGT...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCACACACACAGATCCTaGGATAGTGGAGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVHTHRS*DSGDGG
Trigger: TCCTCCATCTCCACTATCTCAGGATCTGTGTGTGTG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGCACACACACAGATCCTaGGATAGTGGAGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRHTHRS*DSGDGG
Trigger: TCCTCCATCTCCACTATCTCAGGATCTGTGTGTGTG...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAGTGAACAGGAGGACTTaGCACCCGCAGCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTVNRRT*HPQHSA
Trigger: TGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCAC...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGCTTGGCACTCATCCGTaGACAGGAGGACTTGACACC +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVLGTHP*TGGLDT
Trigger: GGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAG...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCAAGCTCGACTGCAATaGAGTCATTGCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAQARLQ*SHCHHH
Trigger: GTGGTGATGGCAATGACTTCATTGCAGTCGAGCTTG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTTCCACTTTCAGGCTATaGGTGTTACTATTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFASTFRL*VLLLSR
Trigger: TCGGGACAATAGTAACACTCATAGCCTGAAAGTGGA...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCACCATTGATAACCTaGGTGACCACTTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWAPLIT*VTTLVS
Trigger: GGACACCAAAGTGGTCACTCAGGTTATCAATGGTGC...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAATCTGTCCGCTCCGATaGAGAGCATCATTGATGAGG +
Preference number: 4 (lower is better)
Translates to: ALRALLLLLHERAVALGGICPLR*RASLMR
Trigger: CCTCATCAATGATGCTCTTCATCGGAGCGGACAGAT...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCAC +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWVKGFP*AIPRYH
Trigger: GTGATATCTGGGTATGGCTCAGGGGAAACCTTTGAC...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCAGGTGCCTGGCAGGCTaGAGAGGTGGCCGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLRCLAG*RGGREA
Trigger: CGCCTCTCGGCCACCTCTGCAGCCTGCCAGGCACCT...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR GCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGCAGGCAAAAGGGGGCTaGAGGTGGAAGAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVQAKGG*RWKSSS
Trigger: CGAAGAACTCTTCCACCTGCAGCCCCCTTTTGCCTG...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTTACGGAGCCCCGGCATaGCACGCATGTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAYGAPA*HACQGK
Trigger: CTTCCCCTGACATGCGTGGCATGCCGGGGCTCCGTA...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGGCGTGGATTCTCAGGTaGATGGTCAACGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGAWILR*MVNARD
Trigger: GTCCCGTGCGTTGACCATGCACCTGAGAATCCACGC...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCCTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGALEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQLEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTCGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGGTTTTGATCCTGCTTaGTCCCACTTTAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSGFDPA*SHFKGL
Trigger: CAAACCCTTAAAGTGGGAGCAAGCAGGATCAAAACC...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATTCACGTGATCCTACCTaGTCTGTGGCTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYSRDPT*SVAWCL
Trigger: GAGACACCAAGCCACAGAGCAGGTAGGATCACGTGA...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTCCCTCTCTGTGAGTTaGATGCAAGAGGCGATGTGT +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPSLSVS*MQEAMC
Trigger: ACACATCGCCTCTTGCATGCAACTCACAGAGAGGGA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAGGAGCTCATTGTCGCTaGTGGGACAGAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGGAHCR*WDRARR
Trigger: CCTCCGGGCTCTGTCCCAGCAGCGACAATGAGCTCC...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGGCCGACTTGCCCGTGTaGAGGATGAGGCCGTTACGC +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRADLPV*RMRPLR
Trigger: GCGTAACGGCCTCATCCTGCACACGGGCAAGTCGGC...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTCACTTTGACATCATaGCAGGCGTTGTCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAAVTLTS*QALSLN
Trigger: ATTCAACGACAACGCCTGGCATGATGTCAAAGTGAC...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTCACTTTGACATCATaGCAGGCGTTGTCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFAVTLTS*QALSLN
Trigger: ATTCAACGACAACGCCTGGCATGATGTCAAAGTGAC...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCACACAGCATTATTCTTaGAGGGGTAGCTGTCACACT +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAATQHYS*RGSCHT
Trigger: AGTGTGACAGCTACCCCTGCAAGAATAATGCTGTGT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGATCCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: ASWQFGHHPRRGGSCEADPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...ATCCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTAATGGAAGTGCAGAGTaGATATCCCTGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELNGSAE*ISLRKH
Trigger: GTGCTTTCTCAGGGATATGCACTCTGCACTTCCATT...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554719.5
CDS-3UTR GCA 90 bp TTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGCATCACAACCATCGCTaGCTTGGTCCGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LPAGNLGTIPDEEEAVKRHHNHR*LGPTSK
Trigger: CTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG...CCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTGGAGGGAGGTGGGTaGGCGAAATCAGCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAVEGGG*AKSARA
Trigger: CGCTCTCGCTGATTTCGCCCACCCACCTCCCTCCAC...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTGGATTCTCAGGTGCATaGTCAACGCACGGGACCACT +
Preference number: 4 (lower is better)
Translates to: PWSDKQGNPASEVMDRESGFSGA*STHGTT
Trigger: AGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCC...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGCCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCCCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LFLVAALRALLLLLHERAPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTTCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NSRVSSVRMFTRNTPCPCGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...ACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR CCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACCAGGCCTGCGGAAGTaGTGGAGCCACCGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEPGLRK*WSHRPA
Trigger: AGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGCATTCACCTGCTTGTTaGACAGCACGGCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVHSPAC*TARQSR
Trigger: CCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATG...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGAACTCCAAACGGGTATaGTCTCCCACCATTGTACCC +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPNSKRV*SPTIVP
Trigger: GGGTACAATGGTGGGAGACCATACCCGTTTGGAGTT...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGAACTCCAAACGGGTATaGTCTCCCACCATTGTACCC +
Preference number: 4 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRNSKRV*SPTIVP
Trigger: GGGTACAATGGTGGGAGACCATACCCGTTTGGAGTT...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTGCAGACCCCCTGGTTaGCACATGAATCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PWSDKQGNPASEVMDRESCRPPG*HMNLPG
Trigger: GCCAGGAAGATTCATGTGCCAACCAGGGGGTCTGCA...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTTGCCAGCTGGCAATTTaGGCACCATCCCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPCQLAI*APSQTR
Trigger: CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCA...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRLAHRQ*ATEARL
Trigger: TAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAG...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGACCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGATGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: ASWQFGHHPRRGGSCEADGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...ATCCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGTTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMLPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLSGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAATGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKCRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGGGTTCCATCACGAGTTaGACTCCCCTACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQGSITS*TPLLSG
Trigger: ACCAGACAGTAGGGGAGTTCAACTCGTGATGGAACC...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAATGTCACCCCTTCTATaGAGCCTTCCCTTACATAAT +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALMSPLL*SLPLHN
Trigger: ATTATGTAAGGGAAGGCTTCATAGAAGGGGTGACAT...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCAATATGTCAGTTTCTaGTCCCATTCTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCQYVSF*SHSLQE
Trigger: TTCTTGGAGAGAATGGGATCAGAAACTGACATATTG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAGGTTGCGTGTCACTTTaGCATCATGCCAGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTGCVSL*HHARRC
Trigger: ACAACGCCTGGCATGATGTCAAAGTGACACGCAACC...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACATCTTGGGGCTTTCCATaGGTGAAGAGGATCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTSWGFP*VKRIRP
Trigger: TGGCCTGATCCTCTTCACTCATGGAAAGCCCCAAGA...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCATTGGCTTTCTTCTaGGTGGCTTTCACTTTGATG +
Preference number: 4 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELSLAFF*VAFTLM
Trigger: CATCAAAGTGAAAGCCACTCAGAAGAAAGCCAATGA...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAATCTCCCCACTGGCGGTaGATGGCGTGCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAESPHWR*MACACC
Trigger: ACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGA...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCTCTCCCCACTGGCGGTaGATGGCGTGCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLSPHWR*MACACC
Trigger: ACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGA...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAACAAGCTCGACTGCAATaGAGTCATTGCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: LPWSDKQGNPASEVMDREQARLQ*SHCHHH
Trigger: GTGGTGATGGCAATGACTTCATTGCAGTCGAGCTTG...TTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp CTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAAGGTCACTGTTGCCTTTaGTCACATTGGGACCGTTTC +
Preference number: 4 (lower is better)
Translates to: LPWSDKQGNPASEVMDREGHCCL*SHWDRF
Trigger: GAAACGGTCCCAATGTGATCAAAGGCAACAGTGACC...TTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCCCTGGTTGGCACATaGATCTTCCTGGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GGRLESKVSPEPYPDITKPLVGT*IFLAGG
Trigger: ACCACCTGCCAGGAAGATTCATGTGCCAACCAGGGG...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATC +
Preference number: 4 (lower is better)
Translates to: AALRALLLLLHERAVALGATFED*SGKTLI
Trigger: GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGC...GCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGACGAGGAGGAAGCTGTaGAGCGGATCAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRTRRKL*SGSAQG
Trigger: CCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTCGT...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCAGGTGCCTGGCAGGCTaGAGAGGTGGCCGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRRCLAG*RGGREA
Trigger: CGCCTCTCGGCCACCTCTGCAGCCTGCCAGGCACCT...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR GCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGAGCGCAAGAGGAGGTaGCTGGCAGGCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVERKRR*LAGCRG
Trigger: ACCTCTGCAGCCTGCCAGGCACCTCCTCTTGCGCTC...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR GCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGCGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTATCAGGAAACTCGGTTaGTCCATAAGAGTAGATCAG +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFIRKLG*SIRVDQ
Trigger: CTGATCTACTCTTATGGAGCAACCGAGTTTCCTGAT...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTATGTTGTTGTCTTATATaGCCTCACTCTCATGCAACC +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALCCCLI*PHSHAT
Trigger: GGTTGCATGAGAGTGAGGGCATATAAGACAACAACA...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGACAGAGATTGTCACCTaGCGGAGGTTGCGTGTCACT +
Preference number: 4 (lower is better)
Translates to: FASWQFGHHPRRGGSCEATEIVT*RRLRVT
Trigger: AGTGACACGCAACCTCCGGCAGGTGACAATCTCTGT...CGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGTTGAAGATGGTTAACTaGCGGCCTTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRLKMVN*RPFSCS
Trigger: GCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAA...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACACCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGAGTGTAATGGAAGGTaGACGAGTAGCAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWECNGR*TSSNRR
Trigger: CCTCCTATTGCTACTCGTGCACCTTCCATTACACTC...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTCATCACAACCATCGCTaGCTTGGTCCGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PWSDKQGNPASEVMDRESHHNHR*LGPTSK
Trigger: CTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACGGGGTGGAGGGAGGTaGGTGGGCGAAATCAGCGAG +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAERGGGR*VGEISE
Trigger: CTCGCTGATTTCGCCCACCCACCTCCCTCCACCCCG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTCCGGCGAGGAAGAGGTaGAGGAGGAGGAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPPARKR*RRRKLH
Trigger: ATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACAGTAGACATTTCTGGTaGCATGGAGGTCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNSRHFW*HGGRLC
Trigger: ACACAGACGACCTCCATGCCACCAGAAATGTCTACT...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCCCAGGCCTGCGGAAGTaGTGGAGCCACCGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRPGLRK*WSHRPA
Trigger: AGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGG...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCTCTGAAATTAGATCCTaGGGGACCAGCTTTTCGAAT +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSSEIRS*GTSFSN
Trigger: ATTCGAAAAGCTGGTCCCCCAGGATCTAATTTCAGA...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCTCTTTAACACAATTTaGCTGGGTGAATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSLFNTI*LGEWTG
Trigger: TCCTGTCCATTCACCCAGCCAAATTGTGTTAAAGAG...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAGATGGATTATCCAATTaGCCAAGTAAGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALDGLSN*PSKCVL
Trigger: CAGCACACACTTACTTGGCCAATTGGATAATCCATC...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTACGTTGGTCTTGAACTaGAAACTCAGGTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIATLVLN*KLRSLR
Trigger: ACGCAGTGACCTGAGTTTCCAGTTCAAGACCAACGT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGCAGTCACAGGTGGGGTaGCCGTCCAGGAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRQSQVG*PSRRKQ
Trigger: CTGCTTTCTCCTGGACGGCCACCCCACCTGTGACTG...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGCTGAGCCTCGGAAAGTaGCCACATTCTCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGLSLGK*PHSPLE
Trigger: CTCGAGAGGAGAATGTGGCCACTTTCCGAGGCTCAG...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGATCATTGATGAGGTCTaGCAGGCGTCCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWIIDEV*QASIQV
Trigger: GACTTGAATGGACGCCTGCCAGACCTCATCAATGAT...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGCCTGGCAGGTGGTACTaGGTCCTTCACAGCCACGCT +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLPGRWY*VLHSHA
Trigger: AGCGTGGCTGTGAAGGACCCAGTACCACCTGCCAGG...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CCATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCGCACATGAATCTTCCTaGCAGGTGGTACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PSSSQPSLPWSDKQGNPAAHESS*QVVLGP
Trigger: AGGACCCAGTACCACCTGCCAGGAAGATTCATGTGC...GGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CCATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCCCTTGGATTCCCACTTaGGCGCATGTGCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: PSSSQPSLPWSDKQGNPAPWIPT*AHVLCS
Trigger: GCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGG...GGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCATTTCACTGCAGGAATaGAAGTGCAGAGTGCATATC +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSISLQE*KCRVHI
Trigger: GATATGCACTCTGCACTTCCATTCCTGCAGTGAAAT...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554719.5
3UTR CAA 72 bp GGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTaGGTGGTCTCAATAATGGTGAGGAGGGGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: GNPASEVMDRES*VVSIMVRRGRK
Trigger: CTTTCGCCCCCTCCTCACCATTATTGAGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGTACAGATGGGCAGTTTaGATTCCAGCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVYRWAV*IPASEE
Trigger: CTCCTCACTGGCTGGAATTCAAACTGCCCATCTGTA...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACATACAGATGGGCAGTTTaGATTCCAGCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTYRWAV*IPASEE
Trigger: CTCCTCACTGGCTGGAATTCAAACTGCCCATCTGTA...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: PWSDKQGNPASEVMDRESFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLPPEPV*FPAPWG
Trigger: ACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGG...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVSGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GAGGAGGAAGCTGTGAAGCGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: EEEAVKRISSGDKDVVVVSGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...GACTACTACCACATCTTTATCCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGATGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: ASWQFGHHPRRGGSCEADVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...ATCCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp TTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: LPAGNLGTIPDEEEAVKRVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...CCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GAGGAGGAAGCTGTGAAGCGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: EEEAVKRISSGDKDVVVVCRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...GACTACTACCACATCTTTATCCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR TCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGTCCCACTTGGGTATCTaGCCTTGTCCTTTAATATAT +
Preference number: 4 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRASHLGI*PCPLIY
Trigger: ATATATTAAAGGACAAGGTCAGATACCCAAGTGGGA...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCAGCCCTAACAAACTTTaGTCTGCAACTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSSPNKL*SATLFL
Trigger: CAGAAACAAAGTTGCAGATCAAAGTTTGTTAGGGCT...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTAAATCTCTCAGTGCATaGACAGAAGAAAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAKSLSA*TEERPC
Trigger: ACAGGGCCTTTCTTCTGTTCATGCACTGAGAGATTT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCGCCTCTCCCTCTCTGTaGGTTGCATGCAAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFASPSL*VACKRR
Trigger: TCGCCTCTTGCATGCAACTCACAGAGAGGGAGAGGC...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGGTTGGGGAGGCCCATaGACTCAAGGCCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEGWGGP*TQGPGR
Trigger: TCTGCCTGGGCCTTGAGTTCATGGGCCTCCCCAACC...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp AACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTGGTTGGGGAGGCCCATaGACTCAAGGCCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NSRVSSVRMFTRNTPCPCGWGGP*TQGPGR
Trigger: TCTGCCTGGGCCTTGAGTTCATGGGCCTCCCCAACC...ACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAACGGCACAGTCCATGCTaGAGCGGAGCTGAACGCGGC +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQRHSPC*SGAERG
Trigger: GCCGCGTTCAGCTCCGCTTCAGCATGGACTGTGCCG...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCCGAGTTTCCATACTTaGGATCCAGAATTAACCCCT +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAPSFHT*DPELTP
Trigger: AGGGGTTAATTCTGGATCTCAAGTATGGAAACTCGG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGCTTGTTCACTCATCATaGGGTGGGAGAGGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGLVHSS*GGRGLD
Trigger: ATCCAGGCCTCTCCCACCTCATGATGAGTGAACAAG...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTTGCTGCGCCCATCAATaGATAGGTCGCGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATACCAHQ*IGRGCS
Trigger: GCTGCATCCGCGACCTATTCATTGATGGGCGCAGCA...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGGTGAACAGGAGGACTTaGCACCCGCAGCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGRLESKVSPEPYPDITKVNRRT*HPQHSA
Trigger: TGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCAC...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGGAGGGTCATATCTATaGGTGAACTACACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRGGSYL*VNYTGD
Trigger: ATCTCCTGTGTAGTTCACTCATAGATATGACCCTCC...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR TCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGGAGGGTCATATCTATaGGTGAACTACACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWGGSYL*VNYTGD
Trigger: ATCTCCTGTGTAGTTCACTCATAGATATGACCCTCC...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR TCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCAC +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVVKGFP*AIPRYH
Trigger: GTGATATCTGGGTATGGCTCAGGGGAAACCTTTGAC...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAGGCACAGGTGAAGTaGAGCGAGGAGTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAEAQVK*SEELGS
Trigger: GCTCCCCAACTCCTCGCTTCACTTCACCTGTGCCTC...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557594.5
CDS-3UTR GCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTTCCATGAGATGCAATaGAGAACTGCCAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPFHEMQ*RTARQK
Trigger: CTTTTGCCTGGCAGTTCTGCATTGCATCTCATGGAA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGACGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTATACAGCCCTTATTTCTaGCTATCAGTTTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALYSPYF*LSVFQG
Trigger: ACCTTGGAAAACTGATAGGCAGAAATAAGGGCTGTA...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGACTCAGGCTTCATGGTaGGGCCAGAAGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLTQASW*GQKQCC
Trigger: GCAGCACTGCTTCTGGCCGCACCATGAAGCCTGAGT...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGCATTGGGCTCTGTGGTaGGGAAGTCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGHWALW*GSQRRW
Trigger: CCATCTCCTTTGACTTCCGCACCACAGAGCCCAATG...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGACACGGTTATTCATTTTaGCAGCTGGCAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ALRALLLLLHERAVALGGHGYSF*QLAIWA
Trigger: TGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTG...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCTGCAGGAATGGAAGTaGAGAGTGCATATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQLQEWK*RVHIPE
Trigger: CTCAGGGATATGCACTCTGCACTTCCATTCCTGCAG...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554719.5
CDS-3UTR GCA 90 bp CATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGGAGTGTAATGGAAGGTaGACGAGTAGCAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: HHNHRCLGPTSKVTPPQRECNGR*TSSNRR
Trigger: CCTCCTATTGCTACTCGTGCACCTTCCATTACACTC...CCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: GGRLESKVSPEPYPDITKEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGTGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LPAGNLGTIPDEEEAVKRCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...CCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTACTCTGGCATGACATaGTTGGCTTGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVYSGMT*LACVTF
Trigger: AAAGGTCACACAAGCCAACCATGTCATGCCAGAGTA...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGGAGGCCGAGGCGGGTaGATTACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAGGRGG*ITRSGD
Trigger: ATCTCCTGACCTCGTAATCCACCCGCCTCGGCCTCC...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCGGAAGAAGAGGTGCATaGAGGTGTAAGCCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAGRRGA*RCKPEE
Trigger: CTCTTCAGGCTTACACCTCCATGCACCTCTTCTTCC...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGTGCATGCAGACCCCCTaGTTGGCACATGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGCMQTP*LAHESS
Trigger: GGAAGATTCATGTGCCAACCAGGGGGTCTGCATGCA...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAAATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: LPWSDKQGNPASEVMDREIHFAS*QFGHHP
Trigger: GGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAAT...TTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQLAHRQ*ATEARL
Trigger: TAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAG...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTTTGAATTCCAGCCAGTaGGGAGTAATGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIALNSSQ*GVMKFM
Trigger: CATGAACTTCATTACTCCTCACTGGCTGGAATTCAA...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGCAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGSSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCCTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEILPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGCTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLLPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCACTCCCGGATCACCTCTaGGGCCCCCGGAACCCGTCT +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSLPDHL*GPRNPS
Trigger: AGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAG...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCTTATCATCCGTCACATaGATTTTGCTATGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAALSSVT*ILLCVQ
Trigger: CTGAACACATAGCAAAATTCATGTGACGGATGATAA...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCTAGAGACAGGTTTATaGAAGAGCTCTAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFLETGL*KSSKFG
Trigger: TCCAAATTTAGAGCTCTTTCATAAACCTGTCTCTAG...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAATGCTGAAGCGGAGCTaGACGCGGCCATCCACCAGG +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPMLKRS*TRPSTR
Trigger: CCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCAT...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCATGCTGAAGCGGAGCTaGACGCGGCCATCCACCAGG +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPMLKRS*TRPSTR
Trigger: CCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCAT...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCAAAGCCGGGCATGGCCTaGACTCCATCAAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LVSETLLGLKSLDSHLGAKPGMA*TPSRVR
Trigger: CCTGACCCTTGATGGAGTTCAGGCCATGCCCGGCTT...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGTAGCACAGATACTCTaGGCCTCGGAAAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVVAQIL*ASESGH
Trigger: GTGGCCACTTTCCGAGGCTCAGAGTATCTGTGCTAC...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGCCTTCAGAGCCAGGTTaGCATAGTCAGCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLPSEPG*HSQPTC
Trigger: GCAAGTCGGCTGACTATGTCAACCTGGCTCTGAAGG...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGAGTGGCTTTCACTTTaGTGGTGCCAGAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLEWLSL*WCQSPC
Trigger: ACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTC...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTCTCCCCACTGGCGGTaGATGGCGTGCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLSPHWR*MACACC
Trigger: ACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGA...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGAATGAAGCCATCTGGTaGGGTGGTCTTGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQNEAIW*GGLELE
Trigger: TTCCAGTTCAAGACCACCTCACCAGATGGCTTCATT...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTACGAGGAGGAAGCTGTaGAGCGGATCAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRTRRKL*SGSAQG
Trigger: CCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTCGT...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCTTGTTCACTCATCATaGGGTGGGAGAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GGRLESKVSPEPYPDITKLVHSS*GGRGLL
Trigger: CAGAAGGCCTCTCCCACCTCATGATGAGTGAACAAG...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp CGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAGTTGCTGGTCATATCTATGAGTaGACTACACAGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: RALLLLLHERAVALGGVAGHIYE*TTQEMK
Trigger: CTTCATCTCCTGTGTAGTTCACTCATAGATATGACC...AGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR TCA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGGTCATATCTATGAGTaGACTACACAGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRGHIYE*TTQEMK
Trigger: CTTCATCTCCTGTGTAGTTCACTCATAGATATGACC...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR GCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTACGGAGCCCCGGCATaGCACGCATGTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMYGAPA*HACQGK
Trigger: CTTCCCCTGACATGCGTGGCATGCCGGGGCTCCGTA...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGCGTGGATTCTCAGGTaGATGGTCAACGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAAWILR*MVNARD
Trigger: GTCCCGTGCGTTGACCATGCACCTGAGAATCCACGC...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGGGCGGTCAGACCGCGTaGTGGGCCTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEGGQTA*WACHWL
Trigger: CAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCC...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCCTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFLEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTCGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVRALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGAGGGGTTGTTGGAGGTaGGAAAAGCAGGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLRGCWR*EKQVLG
Trigger: ACCAAGGACCTGCTTTTCGCACCTCCAACAACCCCT...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAACATTGGGCTCTGTGGTaGGGAAGTCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKHWALW*GSQRRW
Trigger: CCATCTCCTTTGACTTCCGCACCACAGAGCCCAATG...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTACACCCGCAGCATTCTaGATCTCTGCCAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATATPAAF*ISASCR
Trigger: TCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGT...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTCATCACAACCATCGCTaGCTTGGTCCGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPHHNHR*LGPTSK
Trigger: CTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCGGGGTGGAGGGAGGTaGGTGGGCGAAATCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICRGGGR*VGEISE
Trigger: CTCGCTGATTTCGCCCACCCACCTCCCTCCACCCCG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACATGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTCCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGATFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTTTGTGTGACCTTTTGTaGTTCCATCACGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIALCDLL*FHHELN
Trigger: GTTCAACTCGTGATGGAACCACAAAAGGTCACACAA...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGTACTGGTGCTGTCAGTaGACTGCTGCCATTAATCAC +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQYWCCQ*TAAINH
Trigger: GTGATTAATGGCAGCAGTCCACTGACAGCACCAGTA...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAAGCTCATTGTCGCTGCTaGGACAGAGCCCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQAHCRC*DRARRS
Trigger: GCTCCTCCGGGCTCTGTCCCAGCAGCGACAATGAGC...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCGGTCACTGCGTGTGCTaGCATCCCAGCGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPGHCVC*HPSGGS
Trigger: GCTACCTCCGCTGGGATGCCAGCACACGCAGTGACC...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAACCCACTGGCGGTGAATaGCGTGCGCCTGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQPTGGE*RAPAVH
Trigger: GTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGG...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAAGCTGTCACACTGCTTaGCACTCATCCGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKSCHTA*HSSVNR
Trigger: CCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCT...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTAGCTGTCACACTGCTTaGCACTCATCCGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSSCHTA*HSSVNR
Trigger: CCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCT...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGTAAGCCTGAAGAGTaGCAAGGCTCAGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPCKPEE*QGSGSC
Trigger: GCAGCTACCTGAGCCTTGCCACTCTTCAGGCTTACA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCAGAGGCCACGAGCTTTaGGAGGTTGCTGTACATGCC +
Preference number: 4 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFRGHEL*EVAVHA
Trigger: GGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCT...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAAATCTTCCTGGCAGGTaGTACTGGGTCCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKNLPGR*YWVLHS
Trigger: GCTGTGAAGGACCCAGTACCACCTGCCAGGAAGATT...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGTACAGATGGGCAGTTTaGATTCCAGCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVYRWAV*IPASEE
Trigger: CTCCTCACTGGCTGGAATTCAAACTGCCCATCTGTA...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676811.1
CDS-3UTR TCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGATGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GGGAGTGTAATGGAAGGTGCACGAGTAGCAATAGGAGGGGTAGCTAAAGGGTCTTTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GSVMEGARVAIGGVAKGSFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...AGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGCACCTTCCATTACACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGACCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: PWSDKQGNPASEVMDRESCCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRCRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTCCCACTTGGGTATCTaGCCTTGTCCTTTAATATAT +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVSHLGI*PCPLIY
Trigger: ATATATTAAAGGACAAGGTCAGATACCCAAGTGGGA...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCATGTATTAGCTGTGTaGCCTTGGAGAAGTCATTTA +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPHVLAV*PWRSHL
Trigger: TAAATGACTTCTCCAAGGTCACACAGCTAATACATG...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGTTGCGTGTCACTTTaGCATCATGCCAGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAGCVSL*HHARRC
Trigger: ACAACGCCTGGCATGATGTCAAAGTGACACGCAACC...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCTGGGGTCTCAAAGTTaGTGGGGTCCAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGFEITVIHFASWQFGHHLGSQS*WGPVWP
Trigger: TGGCCACACTGGACCCCATCAACTTTGAGACCCCAG...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GGGAGTGTAATGGAAGGTGCACGAGTAGCAATAGGAGGGGTAGCTAAAGGGTCTGAGTGGCTTTCACTTTaGTGGTGCCAGAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: GSVMEGARVAIGGVAKGSEWLSL*WCQSPC
Trigger: ACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTC...AGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGCACCTTCCATTACACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGAACAGGAGGACTTaGCACCCGCAGCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVVNRRT*HPQHSA
Trigger: TGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCAC...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCGCCACTCGTTGTCATTaGGCTTCTGCCCTGCATACA +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFATRCH*ASALHT
Trigger: TGTATGCAGGGCAGAAGCTCAATGACAACGAGTGGC...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAATFED*SGKTLI
Trigger: GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGC...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCAGCGTGGATTCTCAGGTaGATGGTCAACGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: LVSETLLGLKSLDSHLGAAWILR*MVNARD
Trigger: GTCCCGTGCGTTGACCATGCACCTGAGAATCCACGC...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAACTGAGTGATGCTTGCTaGCATGGAAATGGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKLSDAC*HGNGAR
Trigger: ACGAGCACCATTTCCATGGCAGCAAGCATCACTCAG...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGCGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCATGTGCTTTACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GDFVRSKVLGFPLGRMCFTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...AAAGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGACCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTAGCTCACATAGAGAATaGACATGTTCCCATAAAATT +
Preference number: 4 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSSSHRE*TCSHKI
Trigger: AATTTTATGGGAACATGTGCATTCTCTATGTGAGCT...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTACAGCCCTTATTTCTaGCTATCAGTTTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPYSPYF*LSVFQG
Trigger: ACCTTGGAAAACTGATAGGCAGAAATAAGGGCTGTA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAATCAGGTCACTGCGTGTaGTGGCATCCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQSGHCV*WHPSGG
Trigger: ACCTCCGCTGGGATGCCAGCACACGCAGTGACCTGA...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTGGAAACTCAGGTCACTaGGTGTGCTGGCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETGNSGH*VCWHPS
Trigger: GCTGGGATGCCAGCACACGCAGTGACCTGAGTTTCC...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACCTCACCATGAGGAAGTaGCAGCTGCTGTCATTCACC +
Preference number: 4 (lower is better)
Translates to: PTWAHVLCSHLRRLKWKDLTMRK*QLLSFT
Trigger: GGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAG...GTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGCAAGCATCAGCACCGTaGGCAGGCGGTCACGGCTCA +
Preference number: 4 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLQASAP*AGGHGS
Trigger: TGAGCCGTGACCGCCTGCGCACGGTGCTGATGCTTG...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCCAATGTCACCATTTTTaGACAAGTCAATGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSQCHHF*TSQCRE
Trigger: TTCTCTACATTGACTTGTGCAAAAATGGTGACATTG...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCAGGAGGTTGCTGTACATaGCTTGGGCCAGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LVSETLLGLKSLDSHLGAGGCCT*LGPDQP
Trigger: TGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCC...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTGCCGGCCTTTTTCCTaGAGCCACTCCTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETCRPFS*SHSSTG
Trigger: GCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCA...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTGGCTCTTCAGTTTGGTaGTGTCTAGCTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPGSSVW*CLAHRQ
Trigger: CTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCC...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACGGCTCCGTGGGGTTTaGTGTGGGCACATTACGGAA +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAERLRGV*CGHITE
Trigger: TTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTCGGCTCCGTGGGGTTTaGTGTGGGCACATTACGGAA +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRRLRGV*CGHITE
Trigger: TTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCG...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGCATCACAACCATCGCTaGCTTGGTCCGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVHHNHR*LGPTSK
Trigger: CTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGACATCACAACCATCGCTaGCTTGGTCCGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGHHNHR*LGPTSK
Trigger: CTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTACGGGCGCCTGCGAAGTaGGCGGACCAGGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLRAPAK*ADQGGT
Trigger: TGTGCCTCCCTGGTCCGCGCACTTCGCAGGCGCCCG...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557594.5
CDS-3UTR CCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCCCTGGGTTTCCCAACTaGATGAAAACCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFPGFPN*MKTSSS
Trigger: GCTGCTGCTGGTTTTCATCCAGTTGGGAAACCCAGG...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAGGATTCTCAGGTGCATaGTCAACGCACGGGACCACT +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGGFSGA*STHGTT
Trigger: AGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCC...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACCGGCGAGGAAGAGGTaGAGGAGGAGGAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEPARKR*RRRKLH
Trigger: ATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGSSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCATCTGTTCCGGGTTTaGGTGGTAAATTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVHLFRV*VVNSEI
Trigger: AATTTCAGAATTTACCACCCAAACCCGGAACAGATG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACATACTCTGGCATGACATaGTTGGCTTGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTYSGMT*LACVTF
Trigger: AAAGGTCACACAAGCCAACCATGTCATGCCAGAGTA...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCACATTACTGCTACAATaGGTGTATGAAACAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAATLLLQ*VYETSC
Trigger: ACAACTTGTTTCATACACCCATTGTAGCAGTAATGT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCACATTACTGCTACAATaGGTGTATGAAACAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSTLLLQ*VYETSC
Trigger: ACAACTTGTTTCATACACCCATTGTAGCAGTAATGT...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCTTAACTTTTTGGTCCTaGTTAGTCATGCATATAGCA +
Preference number: 4 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSLTFWS*LVMHIA
Trigger: TGCTATATGCATGACTAACCAGGACCAAAAAGTTAA...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCGAAAAGCAGGTCCTTaGTGGCTGGAGATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLRKAGP*WLEMPR
Trigger: CCTCGGCATCTCCAGCCACCAAGGACCTGCTTTTCG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGGGTCACTGCGTGTGCTaGCATCCCAGCGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEGHCVC*HPSGGS
Trigger: GCTACCTCCGCTGGGATGCCAGCACACGCAGTGACC...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCATAGATTTTCATCTTaGTGTCCGCAATCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPHRFSS*CPQSGP
Trigger: TGGCCCGGATTGCGGACACCAAGATGAAAATCTATG...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGGCTGATGTAAGCCTCTaGGGTCTCAAAGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVADVSL*GLKVDG
Trigger: CCCATCAACTTTGAGACCCCAGAGGCTTACATCAGC...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACTTTTGTATTCTTCTaGCTCCGAGCATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGATFVFF*LRASFL
Trigger: GAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGT...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGTGCAGACCCCCTGGTTaGCACATGAATCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPACRPPG*HMNLPG
Trigger: GCCAGGAAGATTCATGTGCCAACCAGGGGGTCTGCA...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCTGCCAGCTGGCAATTTaGGCACCATCCCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLCQLAI*APSQTR
Trigger: CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCA...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTGTGGGCTCTTCAGTTTaGTGCTGTCTAGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSVGSSV*CCLAHR
Trigger: CCTATGAGCTAGACAGCACCAAACTGAAGAGCCCAC...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGCCGTGGGGTTTGCTGTaGGCACATTACGGAACATGG +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVPWGLL*AHYGTW
Trigger: CCATGTTCCGTAATGTGCCCACAGCAAACCCCACGG...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSLRRLK*KDSYLL
Trigger: TAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAG...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSLRRLK*KDSYLL
Trigger: TAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAG...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: LGFEITVIHFASWQFGHHCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRSSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCTCTGGGCGGAGTTGCTaGTGTAGTTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRSGRSC*CSSASR
Trigger: ACGAGACGCGGAACTACATCAGCAACTCCGCCCAGA...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMCRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCAGCTAACCCCTTACTaGTATTTAGAGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVQLTPY*YLEIFS
Trigger: TGAAAAGATCTCTAAATATCAGTAAGGGGTTAGCTG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGGATCCGGAGGCCTTaGCTCAAGGAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPWIRRP*LKEEKV
Trigger: CACCTTCTCCTCCTTGAGTCAAGGCCTCCGGATCCA...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTCCTTCAGAGCCAGGTTaGCATAGTCAGCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRPSEPG*HSQPTC
Trigger: GCAAGTCGGCTGACTATGTCAACCTGGCTCTGAAGG...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGCTGCGCCCATCAATaGATAGGTCGCGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPCCAHQ*IGRGCS
Trigger: GCTGCATCCGCGACCTATTCATTGATGGGCGCAGCA...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCCCCCTGGTTGGCACATaGATCTTCCTGGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRPLVGT*IFLAGG
Trigger: ACCACCTGCCAGGAAGATTCATGTGCCAACCAGGGG...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATC +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGATFED*SGKTLI
Trigger: GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGC...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGACGAGGAGGAAGCTGTaGAGCGGATCAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICETRRKL*SGSAQG
Trigger: CCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTCGT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATACGGAGCCCCGGCATaGCACGCATGTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSYGAPA*HACQGK
Trigger: CTTCCCCTGACATGCGTGGCATGCCGGGGCTCCGTA...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAAGCGTGGATTCTCAGGTaGATGGTCAACGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQAWILR*MVNARD
Trigger: GTCCCGTGCGTTGACCATGCACCTGAGAATCCACGC...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGACTGAGTGATGCTTGCTaGCATGGAAATGGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGLSDAC*HGNGAR
Trigger: ACGAGCACCATTTCCATGGCAGCAAGCATCACTCAG...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVRALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR GCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTCAGCCTGTGGTATTTTaGCAGGGTAATCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPQPVVF*QGNPSR
Trigger: TCTACTGGGATTACCCTGGCAAAATACCACAGGCTG...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGTGTTGTTGTCTTATATaGCCTCACTCTCATGCAACC +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQCCCLI*PHSHAT
Trigger: GGTTGCATGAGAGTGAGGGCATATAAGACAACAACA...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCAGCTAGAAGCCCAATaGTCAGACAGAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMQLEAQ*SDRAGP
Trigger: GGGCCCTGCTCTGTCTGAGCATTGGGCTTCTAGCTG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554738.5
CDS-3UTR GCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGAAGCCTTCAGCGATaGACTCCTCCCAGCGGACCC +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSRSLQR*TPPSGP
Trigger: GGGTCCGCTGGGAGGAGTGCATCGCTGAAGGCTTCT...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554738.5
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTCAGGTCACTGCGTGTaGTGGCATCCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICESGHCV*WHPSGG
Trigger: ACCTCCGCTGGGATGCCAGCACACGCAGTGACCTGA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATGCCGACTTGCCCGTGTaGAGGATGAGGCCGTTACGC +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHADLPV*RMRPLR
Trigger: GCGTAACGGCCTCATCCTGCACACGGGCAAGTCGGC...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGATTGAGCTTCTGCCCTaGATACAAGGTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRIELLP*IQGLWS
Trigger: GGACCAGAGACCTTGTATGCAGGGCAGAAGCTCAAT...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTTGAAGATGGTTAACTaGCGGCCTTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLLKMVN*RPFSCS
Trigger: GCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAA...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTTGAAGATGGTTAACTaGCGGCCTTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPLKMVN*RPFSCS
Trigger: GCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGGGCTCTTCAGTTTGGTaGTGTCTAGCTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLGSSVW*CLAHRQ
Trigger: CTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCC...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCCACCCAAACCAACGTaGCACGGGGTGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSPPKPT*HGVEGG
Trigger: ACCTCCCTCCACCCCGTGCCACGTTGGTTTGGGTGG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGTTCTTCGGGTGTTCCTaGGAGTCTCCGCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRFFGCS*ESPRKG
Trigger: GCCCTTCCGCGGAGACTCCCAGGAACACCCGAAGAA...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTTCTTCGGGTGTTCCTaGGAGTCTCCGCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEFFGCS*ESPRKG
Trigger: GCCCTTCCGCGGAGACTCCCAGGAACACCCGAAGAA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGGCTCCGTCTCGCGTaGATTCTCAGGTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLGLRLA*ILRCMV
Trigger: GACCATGCACCTGAGAATCCACGCGAGACGGAGCCC...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGGGCTCCGTCTCGCGTaGATTCTCAGGTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSGLRLA*ILRCMV
Trigger: GACCATGCACCTGAGAATCCACGCGAGACGGAGCCC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCACCGGCGAGGAAGAGGTaGAGGAGGAGGAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPPARKR*RRRKLH
Trigger: ATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCCCGGCGAGGAAGAGGTaGAGGAGGAGGAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPPARKR*RRRKLH
Trigger: ATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGGGCCTGCGGAAGTGGTaGAGCCACCGTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSGLRKW*SHRPAP
Trigger: TGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCC...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTACCAGGCCTGCGGAAGTaGTGGAGCCACCGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLPGLRK*WSHRPA
Trigger: AGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGG...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTGCAGCTCCCCAGACTaGCCCTCGCCATCAAGCATC +
Preference number: 4 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLCSSPD*PSPSSI
Trigger: GATGCTTGATGGCGAGGGCCAGTCTGGGGAGCTGCA...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCTGAGCCTCGGAAAGTaGCCACATTCTCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLLSLGK*PHSPLE
Trigger: CTCGAGAGGAGAATGTGGCCACTTTCCGAGGCTCAG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCACTGAGCCTCGGAAAGTaGCCACATTCTCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: LVSETLLGLKSLDSHLGALSLGK*PHSPLE
Trigger: CTCGAGAGGAGAATGTGGCCACTTTCCGAGGCTCAG...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTCAAGTCAGCGGTACTTaGGCTTCCTCCTACATAGAA +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPQVSGT*ASSYIE
Trigger: TTCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTG...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGGGAAGAAGAGGTGCATaGAGGTGTAAGCCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRGRRGA*RCKPEE
Trigger: CTCTTCAGGCTTACACCTCCATGCACCTCTTCTTCC...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGGTGGGCTCTTCAGTTTaGTGCTGTCTAGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRVGSSV*CCLAHR
Trigger: CCTATGAGCTAGACAGCACCAAACTGAAGAGCCCAC...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGTTGAATTCCAGCCAGTaGGGAGTAATGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGLNSSQ*GVMKFM
Trigger: CATGAACTTCATTACTCCTCACTGGCTGGAATTCAA...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAACTCCATACAGAGCTaGCGATACATCCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGNSIQS*RYIPRT
Trigger: TGTTCTGGGGATGTATCGTCAGCTCTGTATGGAGTT...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLCCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCTGCCGCAGCCGTGGCTaGGCTTTAGAGAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSCRSRG*ALERDA
Trigger: TGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCA...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGAAGAAATTGTATATCTaGCCCTCCAGAGGACACACT +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGKKLYI*PSRGHT
Trigger: AGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTT...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCGGTGGGTGGATCACTTaGAGTAAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLGGWIT*SKEFET
Trigger: GGTCTCGAACTCCTTACTTCAAGTGATCCACCCACC...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTTCCCAACCCCAAACATaGCTGTATTGGGAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGSQPQT*LYWEVV
Trigger: CACTACCTCCCAATACAGTCATGTTTGGGGTTGGGA...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAAAGCCGGGCATGGCCTaGACTCCATCAAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSKPGMA*TPSRVR
Trigger: CCTGACCCTTGATGGAGTTCAGGCCATGCCCGGCTT...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGAGTTTCCATACTTaGGATCCAGAATTAACCCCT +
Preference number: 4 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVPSFHT*DPELTP
Trigger: AGGGGTTAATTCTGGATCTCAAGTATGGAAACTCGG...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATTGCCCGTGTGCAGGATaGGGCCGTTACGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHCPCAG*GRYAAR
Trigger: CCTGGCAGCGTAACGGCCTCATCCTGCACACGGGCA...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTCCACTTGGGCAAGCTaGTGTAAGCCTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMSTWAS*CKPLGS
Trigger: AGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGA...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR TCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAGGTCACTGTTGCCTTTaGTCACATTGGGACCGTTTC +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGGHCCL*SHWDRF
Trigger: GAAACGGTCCCAATGTGATCAAAGGCAACAGTGACC...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTCCACTTTCAGGCTATaGGTGTTACTATTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPSTFRL*VLLLSR
Trigger: TCGGGACAATAGTAACACTCATAGCCTGAAAGTGGA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAGCACCATTGATAACCTaGGTGACCACTTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGAPLIT*VTTLVS
Trigger: GGACACCAAAGTGGTCACTCAGGTTATCAATGGTGC...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGATGCTAGACAGCCCTaGAAGCCATCTCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSDARQP*KPSREA
Trigger: GGCCTCTCGAGATGGCTTTCAGGGCTGTCTAGCATC...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAAACGAGGAGGAAGCTGTaGAGCGGATCAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQTRRKL*SGSAQG
Trigger: CCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTCGT...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGGCGTGGATTCTCAGGTaGATGGTCAACGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEAWILR*MVNARD
Trigger: GTCCCGTGCGTTGACCATGCACCTGAGAATCCACGC...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGACTGAGTGATGCTTGCTaGCATGGAAATGGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGLSDAC*HGNGAR
Trigger: ACGAGCACCATTTCCATGGCAGCAAGCATCACTCAG...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAACGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCAAAGAAATCTCTCAGTaGATGAACAGAAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAKEISQ*MNRRKA
Trigger: GGCCTTTCTTCTGTTCATGCACTGAGAGATTTCTTT...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTAGCATTCTGCATCTCTaGCAGCTGTCGAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSSILHL*QLSNVL
Trigger: AAGAACATTCGACAGCTGGCAGAGATGCAGAATGCT...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGACACAGCATTATTCTTaGAGGGGTAGCTGTCACACT +
Preference number: 4 (lower is better)
Translates to: GGRLESKVSPEPYPDITKTQHYS*RGSCHT
Trigger: AGTGTGACAGCTACCCCTGCAAGAATAATGCTGTGT...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGTTAAACATGAGGCTCTaGAGATGGCCAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGLNMRL*RWPIKL
Trigger: CAGCTTTATTGGCCATCTGCAGAGCCTCATGTTTAA...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGTGATGACGACATTGTaGCACTGGTTGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVVMTTL*HWLSFR
Trigger: CCTGAATGACAACCAGTGGCACAATGTCGTCATCAC...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGGGAGGTTGCTGTACATaGCTTGGGCCAGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEGGCCT*LGPDQP
Trigger: TGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCC...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAACGAGCTTTGGGAGGTTaGTGTACATGCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQRALGG*CTCLGP
Trigger: TGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCG...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GGGAGTGTAATGGAAGGTGCACGAGTAGCAATAGGAGGGGTAGCTAAAGGGTCTTTGAAGATGGTTAACTaGCGGCCTTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSVMEGARVAIGGVAKGSLKMVN*RPFSCS
Trigger: GCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAA...AGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGCACCTTCCATTACACTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGGCTCTTCAGTTTGGTaGTGTCTAGCTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAGSSVW*CLAHRQ
Trigger: CTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCC...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCGGCTCCGTGGGGTTTaGTGTGGGCACATTACGGAA +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICRLRGV*CGHITE
Trigger: TTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GGGAGTGTAATGGAAGGTGCACGAGTAGCAATAGGAGGGGTAGCTAAAGGGTCTGAGTGTAATGGAAGGTaGACGAGTAGCAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVMEGARVAIGGVAKGSECNGR*TSSNRR
Trigger: CCTCCTATTGCTACTCGTGCACCTTCCATTACACTC...AGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGCACCTTCCATTACACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCGAGTGTAATGGAAGGTaGACGAGTAGCAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFECNGR*TSSNRR
Trigger: CCTCCTATTGCTACTCGTGCACCTTCCATTACACTC...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp GAGGAGGAAGCTGTGAAGCGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: EEEAVKRISSGDKDVVVVTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...GACTACTACCACATCTTTATCCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTATCTCCCAGCGACCGCTaGGACCTTGCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVSPSDR*DLAAAV
Trigger: CACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGA...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTCCAGGCCTGCGGAAGTaGTGGAGCCACCGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFPGLRK*WSHRPA
Trigger: AGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGG...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGAGAGAAGTGAGCAAATaGAAGGACAGAGTTATCCAT +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQREVSK*KDRVIH
Trigger: ATGGATAACTCTGTCCTTCCATTTGCTCACTTCTCT...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCCATTCACCTGCTTGTTaGACAGCACGGCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPHSPAC*TARQSR
Trigger: CCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATG...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGCCCGTTTCAATGTTGTaGAACTCCAAACGGGTATGG +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLPVSML*NSKRVW
Trigger: CCATACCCGTTTGGAGTTCCACAACATTGAAACGGG...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTATGAGGCTCTGCAGATaGCCAATAAAGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETMRLCR*PIKLEG
Trigger: CCCCTCCAGCTTTATTGGCCATCTGCAGAGCCTCAT...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATTGTAAGCCTGAAGAGTaGCAAGGCTCAGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGFEITVIHFASWQFGHHCKPEE*QGSGSC
Trigger: GCAGCTACCTGAGCCTTGCCACTCTTCAGGCTTACA...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTATCATTGATGAGGTCTaGCAGGCGTCCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAIIDEV*QASIQV
Trigger: GACTTGAATGGACGCCTGCCAGACCTCATCAATGAT...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTAATCTTCCTGGCAGGTaGTACTGGGTCCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRNLPGR*YWVLHS
Trigger: GCTGTGAAGGACCCAGTACCACCTGCCAGGAAGATT...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTTTCTGTTTTACCATTTaGAAGCGTTCATTATCAGTG +
Preference number: 4 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAFCFTI*KRSLSV
Trigger: CACTGATAATGAACGCTTCCAAATGGTAAAACAGAA...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCTTGGATTCCCACTTaGGCGCATGTGCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLPWIPT*AHVLCS
Trigger: GCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCCGTGGGGTTTGCTGTaGGCACATTACGGAACATGG +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMPWGLL*AHYGTW
Trigger: CCATGTTCCGTAATGTGCCCACAGCAAACCCCACGG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
3UTR CAA 72 bp GTACTCTGGCATGACATGGTTGGCTTGTGTGACCTTTaGTGGTTCCATCACGAGTTGAACTCCCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: VLWHDMVGLCDL*WFHHELNSPTV
Trigger: GACAGTAGGGGAGTTCAACTCGTGATGGAACCACAAAAGGTCACACAAGCCAACCATGTCATGCCAGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
3UTR CAA 72 bp TTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LRSRLFILPAGN*GTIPDEEEAVK
Trigger: CTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CAA 72 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGCACCATCCCAGACGAG +
Preference number: 4 (lower is better)
Translates to: ISGWGLRSRLFI*PAGNLGTIPDE
Trigger: CTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTACCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAACCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFCCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: LGFEITVIHFASWQFGHHSSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTAAGAAATTGTATATCTaGCCCTCCAGAGGACACACT +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPKKLYI*PSRGHT
Trigger: AGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTT...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGCCTTGCCAACATGGTaGAACCCTTCCTTACTAAAA +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAALPTW*NPSLLK
Trigger: TTTTAGTAAGGAAGGGTTTCACCATGTTGGCAAGGC...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCCAGCTAACCCCTTACTaGTATTTAGAGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAQLTPY*YLEIFS
Trigger: TGAAAAGATCTCTAAATATCAGTAAGGGGTTAGCTG...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGTAGCACAGATACTCTaGGCCTCGGAAAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSVAQIL*ASESGH
Trigger: GTGGCCACTTTCCGAGGCTCAGAGTATCTGTGCTAC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR TCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCGGTTGCGTGTCACTTTaGCATCATGCCAGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPGCVSL*HHARRC
Trigger: ACAACGCCTGGCATGATGTCAAAGTGACACGCAACC...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTCCACTTGGGCAAGCTaGTGTAAGCCTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRSTWAS*CKPLGS
Trigger: AGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGGGGGCTTTCCATGAGTaGAGAGGATCAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRGAFHE*RGSGHW
Trigger: CCAATGGCCTGATCCTCTTCACTCATGGAAAGCCCC...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCGATCTGCCATCTCGCTaGATGTCCACATGGTACCAT +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLDLPSR*MSTWYH
Trigger: ATGGTACCATGTGGACATTCAGCGAGATGGCAGATC...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCCCCCTGGTTGGCACATaGATCTTCCTGGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIPLVGT*IFLAGG
Trigger: ACCACCTGCCAGGAAGATTCATGTGCCAACCAGGGG...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATC +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAATFED*SGKTLI
Trigger: GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGC...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCAGAGTGCATATCCCTaGGAAAGCACAACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMQSAYP*ESTTSG
Trigger: CCCTGAGGTTGTGCTTTCTCAGGGATATGCACTCTG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554719.5
CDS-3UTR TCA 90 bp AACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCAC +
Preference number: 4 (lower is better)
Translates to: NSRVSSVRMFTRNTPCPCVKGFP*AIPRYH
Trigger: GTGATATCTGGGTATGGCTCAGGGGAAACCTTTGAC...ACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTGGAGGAGGAACCCGGTaGGGAGCAGCCACCCAAACC +
Preference number: 4 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFGGGTR*GAATQT
Trigger: GGTTTGGGTGGCTGCTCCGCACCGGGTTCCTCCTCC...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281127.11
CDS-3UTR GCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGATGCAATGCAGAACTaGCAGGCAAAAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSDAMQN*QAKGGC
Trigger: GCAGCCCCCTTTTGCCTGGCAGTTCTGCATTGCATC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGCGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICERCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICLEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPARALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACACTCCAATGTACTTTTTaGAGTCTGTCATCAATCCAA +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTLQCTF*SLSSIQ
Trigger: TTGGATTGATGACAGACTGCAAAAAGTACATTGGAG...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGATCAGGAAACTCGGTTaGTCCATAAGAGTAGATCAG +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLIRKLG*SIRVDQ
Trigger: CTGATCTACTCTTATGGAGCAACCGAGTTTCCTGAT...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGGTGCTGCCCATAACTTaGCTCCCAGGACTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRVLPIT*LPGLQR
Trigger: TCTCTGGAGTCCTGGGAGGCAAGTTATGGGCAGCAC...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAATGAGGCCGTTACGCTaGCAGGTCTTAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPMRPLR*QVLKER
Trigger: CCTCTCCTTTAAGACCTGGCAGCGTAACGGCCTCAT...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGCCGACTTGCCCGTGTaGAGGATGAGGCCGTTACGC +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLADLPV*RMRPLR
Trigger: GCGTAACGGCCTCATCCTGCACACGGGCAAGTCGGC...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGGCAGCAAGTACAGGTTaGCATCGAGGAGTTCCACGG +
Preference number: 4 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLAASTG*HRGVPR
Trigger: CCGTGGAACTCCTCGATGGCAACCTGTACTTGCTGC...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTTGTCATTGAGCTTCTaGCCTGCATACAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PTWAHVLCSHLRRLKWKDLSLSF*PAYKVS
Trigger: AGAGACCTTGTATGCAGGGCAGAAGCTCAATGACAA...GTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGAAGCCCTCCCATTGTTaGATGCAGACCCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEKPSHC*MQTPWL
Trigger: CAACCAGGGGGTCTGCATGCAACAATGGGAGGGCTT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCCCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGCACGGTTATTCATTTTaGCAGCTGGCAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRHGYSF*QLAIWA
Trigger: TGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTG...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATGGCTCTTCAGTTTGGTaGTGTCTAGCTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGFEITVIHFASWQFGHHGSSVW*CLAHRQ
Trigger: CTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCC...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGAGTGTAATGGAAGGTaGACGAGTAGCAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVECNGR*TSSNRR
Trigger: CCTCCTATTGCTACTCGTGCACCTTCCATTACACTC...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCAAAGGGGGCTGCAGGTaGAAGAGTTCTTCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRKGGCR*KSSSGV
Trigger: AACACCCGAAGAACTCTTCCACCTGCAGCCCCCTTT...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATASPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGATCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICETLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAATTTGGCTGGGTGAATaGACAGGAACAATATTGTTA +
Preference number: 4 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTIWLGE*TGTILL
Trigger: TAACAATATTGTTCCTGTCCATTCACCCAGCCAAAT...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGATTTGGCTGGGTGAATaGACAGGAACAATATTGTTA +
Preference number: 4 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQIWLGE*TGTILL
Trigger: TAACAATATTGTTCCTGTCCATTCACCCAGCCAAAT...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGCAGTATGTACATAGGTaGCTAAGGAATTATACCAGC +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGQYVHR*LRNYTS
Trigger: GCTGGTATAATTCCTTAGCCACCTATGTACATACTG...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTCTTATCTGTTACCAAGGCAGACTCAGGCTTCATaGTGCGGCCAGAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LCSHLRRLKWKDSYLLPRQTQAS*CGQKQC
Trigger: GCACTGCTTCTGGCCGCACCATGAAGCCTGAGTCTG...CCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCAAACCGAGTGGAGTGTaGAGCTCATTGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRKPSGV*SSLSLL
Trigger: CAGCAGCGACAATGAGCTCCACACTCCACTCGGTTT...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554738.5
CDS-3UTR CCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCACTTTTGTATTCTTCTaGCTCCGAGCATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFTFVFF*LRASFL
Trigger: GAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGT...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCAGCTGTCACACTGCTTaGCACTCATCCGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRSCHTA*HSSVNR
Trigger: CCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCT...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR CCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCACATCATAGCTCAGGATaGATGCCTCCCTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPHHSSG*MPPFRR
Trigger: CCTGCGAAAGGGAGGCATCCATCCTGAGCTATGATG...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAAACTCCAAACGGGTATaGTCTCCCACCATTGTACCC +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAENSKRV*SPTIVP
Trigger: GGGTACAATGGTGGGAGACCATACCCGTTTGGAGTT...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATGCCAGCTGGCAATTTaGGCACCATCCCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSCQLAI*APSQTR
Trigger: CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCA...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCACAACCATCGCTGCCTTaGTCCGACAAGCAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPQPSLP*SDKQGN
Trigger: GTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTG...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp GCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGATCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: ASWQFGHHPRRGGSCEADLRRLK*KDSYLL
Trigger: TAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAG...ATCCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CAA 72 bp GTGGGCAACGGAAGCAAGACTATATCAGGCTGGGGTTaGAGATCACGGTTATTCATTTTGCCAGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VGNGSKTISGWG*RSRLFILPAGN
Trigger: ATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGGTTTCCCAACTGGATaGAAACCAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICGFPTG*KPAAAA
Trigger: TGCTGCTGCTGCTGGTTTTCATCCAGTTGGGAAACC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR TCA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGATTGAATTCCAGCCAGTaGGGAGTAATGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGLNSSQ*GVMKFM
Trigger: CATGAACTTCATTACTCCTCACTGGCTGGAATTCAA...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676811.1
CDS-3UTR TCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCATTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCCAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGCAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp CTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTCTTATCTGTTACCAAGGTGCCGCCGTTCCTGGTaGAGCGTACCACATGGTATT +
Preference number: 4 (lower is better)
Translates to: LCSHLRRLKWKDSYLLPRCRRSW*SVPHGI
Trigger: AATACCATGTGGTACGCTTCACCAGGAACGGCGGCA...CCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRSSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGCTGCTTCTCCTTCATaGGCGTGCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEAASPS*ACRCSG
Trigger: CCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGC...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGGGTGGGTGGATCACTTaGAGTAAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRGGWIT*SKEFET
Trigger: GGTCTCGAACTCCTTACTTCAAGTGATCCACCCACC...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGAGGGTTTGCTTAGAATaGTATACAGCCCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: VLYDTAGHKTFCLPATAGRVCLE*YTALIS
Trigger: AGAAATAAGGGCTGTATATCATTCTAAGCAAACCCT...CCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTAGAAGAAAGGCCCTGTaGGTACATAGTGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGRRKAL*VHSEKV
Trigger: TACCTTCTCACTATGTACTCACAGGGCCTTTCTTCT...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTCCAACATTCATATGTTaGAGTCCCAACCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAPTFIC*SPNPKH
Trigger: ATGTTTGGGGTTGGGACTTCAACATATGAATGTTGG...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCTTGACTGACATCTTCTaGGCAGAGCTTGCCACCATA +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLLTDIF*AELATI
Trigger: TATGGTGGCAAGCTCTGCTCAGAAGATGTCAGTCAA...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp CTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTCTTATCTGTTACCAAGGGGGGCTTTCCATGAGTaGAGAGGATCAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LCSHLRRLKWKDSYLLPRGAFHE*RGSGHW
Trigger: CCAATGGCCTGATCCTCTTCACTCATGGAAAGCCCC...CCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGGAGTGGCTTTCACTTTaGTGGTGCCAGAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEEWLSL*WCQSPC
Trigger: ACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTC...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGCTTGGCACTCATCCGTaGACAGGAGGACTTGACACC +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLLGTHP*TGGLDT
Trigger: GGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAG...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp ACAACAGAGGATGATACAGGGAGGCAACAACACATACATCCACACCACATAACAGCCACTCGTTGTCATTaGGCTTCTGCCCTGCATACA +
Preference number: 4 (lower is better)
Translates to: TTEDDTGRQQHIHPHHITATRCH*ASALHT
Trigger: TGTATGCAGGGCAGAAGCTCAATGACAACGAGTGGC...TGTTATGTGGTGTGGATGTATGTGTTGTTGCCTCCCTGTATCATCCTCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTAATGAAGCCATCTGGTaGGGTGGTCTTGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETNEAIW*GGLELE
Trigger: TTCCAGTTCAAGACCACCTCACCAGATGGCTTCATT...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAATCTGTCCGCTCCGATaGAGAGCATCATTGATGAGG +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPICPLR*RASLMR
Trigger: CCTCATCAATGATGCTCTTCATCGGAGCGGACAGAT...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGCTGGAGCACTGTCGATaGGGACCAAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLLEHCR*GPRCHP
Trigger: AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATCGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCCCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAACCGCTCTTCGAGCTCTaGTGCTTCTCCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQPLFEL*CFSFMS
Trigger: GCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCATGCCCTCACTCTCATaGAACCCTAACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLMPSLS*NPNTAL
Trigger: AAGAGCAGTGTTAGGGTTGCATGAGAGTGAGGGCAT...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGATGAGGCCGTTACGCTaGCAGGTCTTAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRMRPLR*QVLKER
Trigger: CCTCTCCTTTAAGACCTGGCAGCGTAACGGCCTCAT...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCCATTGGGCTCTGTGGTaGGGAAGTCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSHWALW*GSQRRW
Trigger: CCATCTCCTTTGACTTCCGCACCACAGAGCCCAATG...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR GCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAAACACCCGCAGCATTCTaGATCTCTGCCAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQTPAAF*ISASCR
Trigger: TCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGT...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTTAAACATGAGGCTCTaGAGATGGCCAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLLNMRL*RWPIKL
Trigger: CAGCTTTATTGGCCATCTGCAGAGCCTCATGTTTAA...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCCAATGTCACCATTTTTaGACAAGTCAATGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAQCHHF*TSQCRE
Trigger: TTCTCTACATTGACTTGTGCAAAAATGGTGACATTG...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTAAGCCCTCCCATTGTTaGATGCAGACCCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVKPSHC*MQTPWL
Trigger: CAACCAGGGGGTCTGCATGCAACAATGGGAGGGCTT...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCCAGCCCGAACCCAAGTaGGTTCAGGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSQPEPK*VQVSLS
Trigger: GGATAAACTCACCTGAACCCACTTGGGTTCGGGCTG...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAGGATTCTCAGGTGCATaGTCAACGCACGGGACCACT +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSGFSGA*STHGTT
Trigger: AGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCC...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTGGATTCTCAGGTGCATaGTCAACGCACGGGACCACT +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSGFSGA*STHGTT
Trigger: AGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCC...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCCAGAGAGTTGGCCTTaGAAGAGGCGTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSPESWP*KRRPLS
Trigger: GGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATAGTAGACATTTCTGGTaGCATGGAGGTCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LGFEITVIHFASWQFGHHSRHFW*HGGRLC
Trigger: ACACAGACGACCTCCATGCCACCAGAAATGTCTACT...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATACCTTGCCGCAGCCGTaGCTGAGCTTTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHTLPQP*LSFRER
Trigger: TCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGTACTCTGGCATGACATaGTTGGCTTGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVYSGMT*LACVTF
Trigger: AAAGGTCACACAAGCCAACCATGTCATGCCAGAGTA...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGCTGGTAACCAACATATaGATAAAGGACAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLLVTNI*IKDSCS
Trigger: TGAACAGCTGTCCTTTATCCATATGTTGGTTACCAG...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATCAGTCACAGGTGGGGTaGCCGTCCAGGAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDQSQVG*PSRRKQ
Trigger: CTGCTTTCTCCTGGACGGCCACCCCACCTGTGACTG...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp AACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTCAAGTCAGCGGTACTTaGGCTTCCTCCTACATAGAA +
Preference number: 4 (lower is better)
Translates to: NSRVSSVRMFTRNTPCPCQVSGT*ASSYIE
Trigger: TTCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTG...ACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGCATCATAGCTCAGGATaGATGCCTCCCTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLHHSSG*MPPFRR
Trigger: CCTGCGAAAGGGAGGCATCCATCCTGAGCTATGATG...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGATGCATACAAGGTCTCTaGTCCTTTGCTGGAGTTACA +
Preference number: 4 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGCIQGL*SFAGVT
Trigger: TGTAACTCCAGCAAAGGACCAGAGACCTTGTATGCA...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACCCGTTTCAATGTTGTaGAACTCCAAACGGGTATGG +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEPVSML*NSKRVW
Trigger: CCATACCCGTTTGGAGTTCCACAACATTGAAACGGG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTCTGTTTTACCATTTaGAAGCGTTCATTATCAGTG +
Preference number: 4 (lower is better)
Translates to: PWSDKQGNPASEVMDRESFCFTI*KRSLSV
Trigger: CACTGATAATGAACGCTTCCAAATGGTAAAACAGAA...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GGGAGTGTAATGGAAGGTGCACGAGTAGCAATAGGAGGGGTAGCTAAAGGGTCTAAGACTATATCAGGCTaGGGTTTGAGATCACGGTTA +
Preference number: 4 (lower is better)
Translates to: GSVMEGARVAIGGVAKGSKTISG*GLRSRL
Trigger: TAACCGTGATCTCAAACCCCAGCCTGATATAGTCTT...AGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGCACCTTCCATTACACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGAAGACTATATCAGGCTaGGGTTTGAGATCACGGTTA +
Preference number: 4 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLKTISG*GLRSRL
Trigger: TAACCGTGATCTCAAACCCCAGCCTGATATAGTCTT...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTAAGACTATATCAGGCTaGGGTTTGAGATCACGGTTA +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAKTISG*GLRSRL
Trigger: TAACCGTGATCTCAAACCCCAGCCTGATATAGTCTT...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRLAHRQ*ATEARL
Trigger: TAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAG...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMLAHRQ*ATEARL
Trigger: TAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGTTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGTTGAATTCCAGCCAGTaGGGAGTAATGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPALNSSQ*GVMKFM
Trigger: CATGAACTTCATTACTCCTCACTGGCTGGAATTCAA...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTACAGATGGGCAGTTTaGATTCCAGCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRYRWAV*IPASEE
Trigger: CTCCTCACTGGCTGGAATTCAAACTGCCCATCTGTA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGTACAGATGGGCAGTTTaGATTCCAGCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRYRWAV*IPASEE
Trigger: CTCCTCACTGGCTGGAATTCAAACTGCCCATCTGTA...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGAACTCCATACAGAGCTaGCGATACATCCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMNSIQS*RYIPRT
Trigger: TGTTCTGGGGATGTATCGTCAGCTCTGTATGGAGTT...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCACCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAPSQWC*SPRQGG
Trigger: ACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGG...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTCAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGCAAGTAAGTGTGTGCTaGGAGAACGAGAAATATGAG +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAQVSVC*ENEKYE
Trigger: CTCATATTTCTCGTTCTCTCAGCACACACTTACTTG...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAAAATCTCTCAGTGCATaGACAGAAGAAAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEKSLSA*TEERPC
Trigger: ACAGGGCCTTTCTTCTGTTCATGCACTGAGAGATTT...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCACATCTCCCAAGATCTaGGCATGCATTGCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLTSPKI*ACIAFS
Trigger: GCTAAAAGCAATGCATGCTCAGATCTTGGGAGATGT...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATCTGGGGTCTCAAAGTTaGTGGGGTCCAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHLGSQS*WGPVWP
Trigger: TGGCCACACTGGACCCCATCAACTTTGAGACCCCAG...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATCTTGGGGCTTTCCATaGGTGAAGAGGATCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSSWGFP*VKRIRP
Trigger: TGGCCTGATCCTCTTCACTCATGGAAAGCCCCAAGA...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGGATCTGCCATCTCGCTaGATGTCCACATGGTACCAT +
Preference number: 4 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLDLPSR*MSTWYH
Trigger: ATGGTACCATGTGGACATTCAGCGAGATGGCAGATC...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAGCCACTCGTTGTCATTaGGCTTCTGCCCTGCATACA +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSATRCH*ASALHT
Trigger: TGTATGCAGGGCAGAAGCTCAATGACAACGAGTGGC...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGATGCTAGACAGCCCTaGAAGCCATCTCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLDARQP*KPSREA
Trigger: GGCCTCTCGAGATGGCTTTCAGGGCTGTCTAGCATC...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCAGTGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATC +
Preference number: 4 (lower is better)
Translates to: FAVGTLRNMGEVISGLFSATFED*SGKTLI
Trigger: GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGC...ACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTACGAGGAGGAAGCTGTaGAGCGGATCAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFTRRKL*SGSAQG
Trigger: CCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTCGT...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCAC +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICVKGFP*AIPRYH
Trigger: GTGATATCTGGGTATGGCTCAGGGGAAACCTTTGAC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGAGCAGGAGGAAGAGTTaGCAGAATTCGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLSRRKS*QNSGKR
Trigger: CCTCTTCCCCGAATTCTGGCAACTCTTCCTCCTGCT...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676811.1
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGCTGAGTGATGCTTGCTaGCATGGAAATGGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICELSDAC*HGNGAR
Trigger: ACGAGCACCATTTCCATGGCAGCAAGCATCACTCAG...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCAGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LVSETLLGLKSLDSHLGAVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LGFEITVIHFASWQFGHHVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTACGGCAGCAGCCACAATaGCGACGACCATCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVRQQPQ*RRPSLL
Trigger: CAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCG...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAGGAAGTTTCCAGGCCTaGGGAAGTGGTGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVGSFQA*GSGGAT
Trigger: GGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCC...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCGGCTACCATTTAGATTaGACTTTTTGCCCCATGTCG +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLGYHLD*TFCPMS
Trigger: CGACATGGGGCAAAAAGTGCAATCTAAATGGTAGCC...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCACAGCCTGTGGTATTTTaGCAGGGTAATCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPQPVVF*QGNPSR
Trigger: TCTACTGGGATTACCCTGGCAAAATACCACAGGCTG...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGGAACTTCAACCTTTaGAATTCCCACTACTATACA +
Preference number: 4 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPWNFNL*NSHYYT
Trigger: TGTATAGTAGTGGGAATTGCAAAGGTTGAAGTTCCA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTGGAACTTCAACCTTTaGAATTCCCACTACTATACA +
Preference number: 4 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLWNFNL*NSHYYT
Trigger: TGTATAGTAGTGGGAATTGCAAAGGTTGAAGTTCCA...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCTCACCATGAGGAAGTaGCAGCTGCTGTCATTCACC +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSLTMRK*QLLSFT
Trigger: GGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCACAGAGATTGTCACCTaGCGGAGGTTGCGTGTCACT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEITEIVT*RRLRVT
Trigger: AGTGACACGCAACCTCCGGCAGGTGACAATCTCTGT...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAGGAGGTTGCTGTACATaGCTTGGGCCAGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVGGCCT*LGPDQP
Trigger: TGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCC...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTATGCCGGCCTTTTTCCTaGAGCCACTCCTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVCRPFS*SHSSTG
Trigger: GCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCA...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAATTGAAGATGGTTAACTaGCGGCCTTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQLKMVN*RPFSCS
Trigger: GCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAA...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTCCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCCATCATCATCACAATGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SKVSPEPYPDITKPSSSQCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...TTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMSSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAACATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCCATCTGTTCCGGGTTTaGGTGGTAAATTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFHLFRV*VVNSEI
Trigger: AATTTCAGAATTTACCACCCAAACCCGGAACAGATG...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGAGAGAAGTGAGCAAATaGAAGGACAGAGTTATCCAT +
Preference number: 4 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVREVSK*KDRVIH
Trigger: ATGGATAACTCTGTCCTTCCATTTGCTCACTTCTCT...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCGGAGGCCGAGGCGGGTaGATTACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFGGRGG*ITRSGD
Trigger: ATCTCCTGACCTCGTAATCCACCCGCCTCGGCCTCC...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTACTCACGGTCCCACTTaGGTATCTGACCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSTHGPT*VSDLVL
Trigger: AAGGACAAGGTCAGATACCCAAGTGGGACCGTGAGT...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTATGCAGCTCCCCAGACTaGCCCTCGCCATCAAGCATC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVCSSPD*PSPSSI
Trigger: GATGCTTGATGGCGAGGGCCAGTCTGGGGAGCTGCA...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGCTGATGTAAGCCTCTaGGGTCTCAAAGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSADVSL*GLKVDG
Trigger: CCCATCAACTTTGAGACCCCAGAGGCTTACATCAGC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATCATCATAGCTCAGGATaGATGCCTCCCTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHHHSSG*MPPFRR
Trigger: CCTGCGAAAGGGAGGCATCCATCCTGAGCTATGATG...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCCCTGGCAGGTGGTACTaGGTCCTTCACAGCCACGCT +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFPGRWY*VLHSHA
Trigger: AGCGTGGCTGTGAAGGACCCAGTACCACCTGCCAGG...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAATGCATGCAGACCCCCTaGTTGGCACATGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQCMQTP*LAHESS
Trigger: GGAAGATTCATGTGCCAACCAGGGGGTCTGCATGCA...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAACTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTAC +
Preference number: 4 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKLRRLK*KDSYLY
Trigger: GTACAGATAAGAGTCTTTCCACTTCAATCTTCGAAG...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAACCTTGGATTCCCACTTaGGCGCATGTGCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQPWIPT*AHVLCS
Trigger: GCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGG...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGAAGACTATATCAGGCTaGGGTTTGAGATCACGGTTA +
Preference number: 4 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAKTISG*GLRSRL
Trigger: TAACCGTGATCTCAAACCCCAGCCTGATATAGTCTT...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCTAGCTCATAGGCAGTaGGCAACGGAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRLAHRQ*ATEARL
Trigger: TAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAG...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCCAACCATCGCTGCCTTaGTCCGACAAGCAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIQPSLP*SDKQGN
Trigger: GTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTG...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCAACCATCGCTGCCTTaGTCCGACAAGCAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSQPSLP*SDKQGN
Trigger: GTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
3UTR CAA 72 bp TCACGTGATCCTACCTGCTCTGTGGCTTGGTGTCTCTaGGAATTATTTGCTCTTCTACTTGGGCCATGTAAC +
Preference number: 4 (lower is better)
Translates to: SRDPTCSVAWCL*ELFALLLGPCN
Trigger: GTTACATGGCCCAAGTAGAAGAGCAAATAATTCCAAGAGACACCAAGCCACAGAGCAGGTAGGATCACGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGAACTCCATACAGAGCTaGCGATACATCCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRNSIQS*RYIPRT
Trigger: TGTTCTGGGGATGTATCGTCAGCTCTGTATGGAGTT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTCAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTGGGTTCTCTCCTCTTTaGTGGAGATGTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVGFSPL*WRCQLC
Trigger: GCACAGTTGACATCTCCATCAAAGAGGAGAGAACCC...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEISSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTCTAGAGACAGGTTTATaGAAGAGCTCTAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: CVLYDTAGHKTFCLPATALETGL*KSSKFG
Trigger: TCCAAATTTAGAGCTCTTTCATAAACCTGTCTCTAG...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTATGGATCCGGAGGCCTTaGCTCAAGGAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVWIRRP*LKEEKV
Trigger: CACCTTCTCCTCCTTGAGTCAAGGCCTCCGGATCCA...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp CTAGATTACAGTGAAGAACAAAGGGTAGATGGATTATCCAATTGGCCAAGTAAGGTAGCACAGATACTCTaGGCCTCGGAAAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LDYSEEQRVDGLSNWPSKVAQIL*ASESGH
Trigger: GTGGCCACTTTCCGAGGCTCAGAGTATCTGTGCTAC...CTTACTTGGCCAATTGGATAATCCATCTACCCTTTGTTCTTCACTGTAATCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATCAAGCTCGACTGCAATaGAGTCATTGCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHQARLQ*SHCHHH
Trigger: GTGGTGATGGCAATGACTTCATTGCAGTCGAGCTTG...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTGCACCATTGATAACCTaGGTGACCACTTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSAPLIT*VTTLVS
Trigger: GGACACCAAAGTGGTCACTCAGGTTATCAATGGTGC...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCAGTTATCAGGCTGGGGTTTaGGATCACGGTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: FAVGTLRNMGEVISGLFSYQAGV*DHGYSF
Trigger: AAATGAATAACCGTGATCTCAAACCCCAGCCTGATA...ACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCTATCAGGCTGGGGTTTaGGATCACGGTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLYQAGV*DHGYSF
Trigger: AAATGAATAACCGTGATCTCAAACCCCAGCCTGATA...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTCTTATCTGTTACCAAGGGTCAAAGGTTTCCCCTaGGCCATACCCAGATATCAC +
Preference number: 4 (lower is better)
Translates to: LCSHLRRLKWKDSYLLPRVKGFP*AIPRYH
Trigger: GTGATATCTGGGTATGGCTCAGGGGAAACCTTTGAC...CCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATCTGAGTGATGCTTGCTaGCATGGAAATGGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHLSDAC*HGNGAR
Trigger: ACGAGCACCATTTCCATGGCAGCAAGCATCACTCAG...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAACAGGAGGATCAAGATaGAGAGGGCGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVTGGSR*RGRQQP
Trigger: TGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGT...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGATGCCCTCACTCTCATaGAACCCTAACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRMPSLS*NPNTAL
Trigger: AAGAGCAGTGTTAGGGTTGCATGAGAGTGAGGGCAT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAGGAAACTCAGGTCACTaGGTGTGCTGGCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVGNSGH*VCWHPS
Trigger: GCTGGGATGCCAGCACACGCAGTGACCTGAGTTTCC...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCGTCACTTTGACATCATaGCAGGCGTTGTCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRVTLTS*QALSLN
Trigger: ATTCAACGACAACGCCTGGCATGATGTCAAAGTGAC...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTTGAAGATGGTTAACTaGCGGCCTTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICELKMVN*RPFSCS
Trigger: GCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCCACGGTTATTCATTTTaGCAGCTGGCAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRHGYSF*QLAIWA
Trigger: TGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTG...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATGGCTCTTCAGTTTGGTaGTGTCTAGCTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHGSSVW*CLAHRQ
Trigger: CTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCC...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICECPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGAGTAGACATTTCTGGTaGCATGGAGGTCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRSRHFW*HGGRLC
Trigger: ACACAGACGACCTCCATGCCACCAGAAATGTCTACT...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRSSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGTTACACGCACACTaGTCAGAACCAGATAAGGGT +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPKLHAH*SEPDKG
Trigger: ACCCTTATCTGGTTCTGACCAGTGTGCGTGTAACTT...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTGTTGAACAGAAGATTTaGGATCTGTCTGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGVEQKI*DLSVCL
Trigger: CAGACATACAGACAGATCCCAAATCTTCTGTTCAAC...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGTGAAGAAAACCGAGTaGAGTGTGGAGCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICVKKTE*SVELIV
Trigger: GACAATGAGCTCCACACTCCACTCGGTTTTCTTCAC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGTGAAGAAAACCGAGTaGAGTGTGGAGCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLVKKTE*SVELIV
Trigger: GACAATGAGCTCCACACTCCACTCGGTTTTCTTCAC...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCATAGATTTTCATCTTaGTGTCCGCAATCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRHRFSS*CPQSGP
Trigger: TGGCCCGGATTGCGGACACCAAGATGAAAATCTATG...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGACTTTTGTATTCTTCTaGCTCCGAGCATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMTFVFF*LRASFL
Trigger: GAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGT...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR CCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAACGACATTGTGCCACTaGTTGTCATTCAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLTTLCH*LSFRGR
Trigger: CCGCCCCCTGAATGACAACCAGTGGCACAATGTCGT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATAGAGGCCACGAGCTTTaGGAGGTTGCTGTACATGCC +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDRGHEL*EVAVHA
Trigger: GGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCT...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATGCAGACCCCCTGGTTaGCACATGAATCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHECRPPG*HMNLPG
Trigger: GCCAGGAAGATTCATGTGCCAACCAGGGGGTCTGCA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCTGCCAGCTGGCAATTTaGGCACCATCCCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFCQLAI*APSQTR
Trigger: CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCA...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: GGRLESKVSPEPYPDITKLRRLK*KDSYLL
Trigger: TAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAG...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
3UTR CAA 72 bp GTTGGCTTGTGTGACCTTTTGTGGTTCCATCACGAGTaGAACTCCCCTACTGTCTGGTTTGATAACAGACTT +
Preference number: 4 (lower is better)
Translates to: VGLCDLLWFHHE*NSPTVWFDNRL
Trigger: AAGTCTGTTATCAAACCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCACAAAAGGTCACACAAGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTATTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLCCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAAGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGAAATTGTATATCTaGCCCTCCAGAGGACACACT +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPKKLYI*PSRGHT
Trigger: AGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTT...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGAGAAGAAAGGCCCTGTaGGTACATAGTGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRRRKAL*VHSEKV
Trigger: TACCTTCTCACTATGTACTCACAGGGCCTTTCTTCT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCTCATTGGCTTTCTTCTaGGTGGCTTTCACTTTGATG +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRSLAFF*VAFTLM
Trigger: CATCAAAGTGAAAGCCACTCAGAAGAAAGCCAATGA...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR TCA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCAGCGTTTCTCAGTCATaGTTCCCGTTTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPSVSQS*FPFQCC
Trigger: ACAACATTGAAACGGGAATCATGACTGAGAAACGCT...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAAGCAGGAGGAAGAGTTaGCAGAATTCGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHESRRKS*QNSGKR
Trigger: CCTCTTCCCCGAATTCTGGCAACTCTTCCTCCTGCT...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTACGATGCGGACCAAGATaGCATCCTTCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVRCGPR*HPSQWC
Trigger: GCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSRALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATTCACGTGATCCTACCTaGTCTGTGGCTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDSRDPT*SVAWCL
Trigger: GAGACACCAAGCCACAGAGCAGGTAGGATCACGTGA...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAACAGAGATTGTCACCTaGCGGAGGTTGCGTGTCACT +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLTEIVT*RRLRVT
Trigger: AGTGACACGCAACCTCCGGCAGGTGACAATCTCTGT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGAGCATTCTGCATCTCTaGCAGCTGTCGAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRSILHL*QLSNVL
Trigger: AAGAACATTCGACAGCTGGCAGAGATGCAGAATGCT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTGTGATGACGACATTGTaGCACTGGTTGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVVMTTL*HWLSFR
Trigger: CCTGAATGACAACCAGTGGCACAATGTCGTCATCAC...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACTGCCGGCCTTTTTCCTaGAGCCACTCCTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: RKLCKNALGQIELPHSCNCRPFS*SHSSTG
Trigger: GCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCA...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR GCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCACGGTTATTCATTTTaGCAGCTGGCAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRHGYSF*QLAIWA
Trigger: TGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTG...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATTGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAAACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTACATTTCTGGTGGCATaGAGGTCGTCTGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSTFLVA*RSSVLF
Trigger: GAACAACACAGACGACCTCCATGCCACCAGAAATGT...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCAGTAGACATTTCTGGTaGCATGGAGGTCGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEISRHFW*HGGRLC
Trigger: ACACAGACGACCTCCATGCCACCAGAAATGTCTACT...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLSSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTCATCTGTTCCGGGTTTaGGTGGTAAATTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRHLFRV*VVNSEI
Trigger: AATTTCAGAATTTACCACCCAAACCCGGAACAGATG...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCACTCTTTAACACAATTTaGCTGGGTGAATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPLFNTI*LGEWTG
Trigger: TCCTGTCCATTCACCCAGCCAAATTGTGTTAAAGAG...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATTAGCGCCTTCCTACTaGTGCTGTCAGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHELAPSY*CCQWTA
Trigger: AGCAGTCCACTGACAGCACCAGTAGGAAGGCGCTAA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCATCCTACCTGCTCTGTaGCTTGGTGTCTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIILPAL*LGVSWN
Trigger: ATTCCAAGAGACACCAAGCCACAGAGCAGGTAGGAT...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATATCCTACCTGCTCTGTaGCTTGGTGTCTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHILPAL*LGVSWN
Trigger: ATTCCAAGAGACACCAAGCCACAGAGCAGGTAGGAT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGGTACCAGATGAGCCATaGCATTTTGACTCTAGAACC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEVPDEP*HFDSRT
Trigger: GGTTCTAGAGTCAAAATGCCATGGCTCATCTGGTAC...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCGAAGGGAGGGGTTGTTaGAGGTGCGAAAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFEGRGC*RCEKQV
Trigger: GACCTGCTTTTCGCACCTCCAACAACCCCTCCCTTC...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGACGTTGGTCTTGAACTaGAAACTCAGGTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLTLVLN*KLRSLR
Trigger: ACGCAGTGACCTGAGTTTCCAGTTCAAGACCAACGT...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCACATAGATTTTCATCTTaGTGTCCGCAATCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSHRFSS*CPQSGP
Trigger: TGGCCCGGATTGCGGACACCAAGATGAAAATCTATG...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAATGAGGCTCTGCAGATaGCCAATAAAGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEMRLCR*PIKLEG
Trigger: CCCCTCCAGCTTTATTGGCCATCTGCAGAGCCTCAT...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATTGTAAGCCTGAAGAGTaGCAAGGCTCAGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHCKPEE*QGSGSC
Trigger: GCAGCTACCTGAGCCTTGCCACTCTTCAGGCTTACA...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CTAGATTACAGTGAAGAACAAAGGGTAGATGGATTATCCAATTGGCCAAGTAAGTGCATGCAGACCCCCTaGTTGGCACATGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LDYSEEQRVDGLSNWPSKCMQTP*LAHESS
Trigger: GGAAGATTCATGTGCCAACCAGGGGGTCTGCATGCA...CTTACTTGGCCAATTGGATAATCCATCTACCCTTTGTTCTTCACTGTAATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAAATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQIHFAS*QFGHHP
Trigger: GGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAAT...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIIHFAS*QFGHHP
Trigger: GGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAAT...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCTTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp GAGGAGGAAGCTGTGAAGCGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: EEEAVKRISSGDKDVVVVLRRLK*KDSYLL
Trigger: TAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAG...GACTACTACCACATCTTTATCCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTAGTGAAGCGAGGAGTTaGGGAGCCAAATTCACAAAT +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICSEARS*GAKFTN
Trigger: ATTTGTGAATTTGGCTCCCCAACTCCTCGCTTCACT...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557594.5
3UTR CAA 72 bp ATATGCTCGAGTCCTTTGTACTCGACAAAGCAGCCCTaGACCTTGAACTTCTCAAGCTATTCTCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: ICSSPLYSTKQP*TLNFSSYSPIS
Trigger: AGAAATGGGAGAATAGCTTGAGAAGTTCAAGGTCAAGGGCTGCTTTGTCGAGTACAAAGGACTCGAGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CAA 72 bp AAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: KDVVVVLLVSET*LGLKSLDSHLG
Trigger: GCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp CTAGATTACAGTGAAGAACAAAGGGTAGATGGATTATCCAATTGGCCAAGTAAGTTCCCCTGTTCTATGTaGAGCTGGAGGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LDYSEEQRVDGLSNWPSKFPCSM*SWRKSP
Trigger: TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAA...CTTACTTGGCCAATTGGATAATCCATCTACCCTTTGTTCTTCACTGTAATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGCAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTATTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHCCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATTCATCTGATGTTGGCTaGATGCTGGCTGTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDSSDVG*MLAVER
Trigger: TCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAATTATCATCCGTCACATaGATTTTGCTATGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAELSSVT*ILLCVQ
Trigger: CTGAACACATAGCAAAATTCATGTGACGGATGATAA...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCGGTTCCATCACGAGTTaGACTCCCCTACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFGSITS*TPLLSG
Trigger: ACCAGACAGTAGGGGAGTTCAACTCGTGATGGAACC...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCCAACATTCATATGTTaGAGTCCCAACCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICPTFIC*SPNPKH
Trigger: ATGTTTGGGGTTGGGACTTCAACATATGAATGTTGG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATCTTGGCACTCATCCGTaGACAGGAGGACTTGACACC +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHLGTHP*TGGLDT
Trigger: GGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAG...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGAGCGTTTCTCAGTCATaGTTCCCGTTTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICESVSQS*FPFQCC
Trigger: ACAACATTGAAACGGGAATCATGACTGAGAAACGCT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATTCCACTTTCAGGCTATaGGTGTTACTATTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHSTFRL*VLLLSR
Trigger: TCGGGACAATAGTAACACTCATAGCCTGAAAGTGGA...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATATCTGTCCGCTCCGATaGAGAGCATCATTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHICPLR*RASLMR
Trigger: CCTCATCAATGATGCTCTTCATCGGAGCGGACAGAT...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTTATCAGGCTGGGGTTTaGGATCACGGTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSYQAGV*DHGYSF
Trigger: AAATGAATAACCGTGATCTCAAACCCCAGCCTGATA...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCAGGAGGAAGAGTTaGCAGAATTCGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVSRRKS*QNSGKR
Trigger: CCTCTTCCCCGAATTCTGGCAACTCTTCCTCCTGCT...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTACTGAGTGATGCTTGCTaGCATGGAAATGGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVLSDAC*HGNGAR
Trigger: ACGAGCACCATTTCCATGGCAGCAAGCATCACTCAG...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCTTTCATTTCAAATATaGTCGAGTCCTTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLLSFQI*SSPLYS
Trigger: CGAGTACAAAGGACTCGAGCATATTTGAAATGAAAG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCAAAGAAATCTCTCAGTaGATGAACAGAAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRKEISQ*MNRRKA
Trigger: GGCCTTTCTTCTGTTCATGCACTGAGAGATTTCTTT...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTACCACTTGGGCGCATGTaGTTTGTAGCCACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVPLGRM*FVATFE
Trigger: TTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGG...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHEVTKS*STVDAD
Trigger: GTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTC...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTTCCCCACCAGAGTCGTaGTTATATACCCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSSPPES*LYTPFH
Trigger: ATGAAATGGGGTATATAACCACGACTCTGGTGGGGA...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp TTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCAGTCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: FAVGTLRNMGEVISGLFSHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...ACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR CCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTTCTGAAATTAGATCCTaGGGGACCAGCTTTTCGAAT +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSSEIRS*GTSFSN
Trigger: ATTCGAAAAGCTGGTCCCCCAGGATCTAATTTCAGA...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTCTCTTTAACACAATTTaGCTGGGTGAATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSLFNTI*LGEWTG
Trigger: TCCTGTCCATTCACCCAGCCAAATTGTGTTAAAGAG...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTTGTGTGACCTTTTGTaGTTCCATCACGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICELCDLL*FHHELN
Trigger: GTTCAACTCGTGATGGAACCACAAAAGGTCACACAA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAGAGGTGGGAGAGGCCTaGATCTTGACTGACATCTTC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVEVGEA*ILTDIF
Trigger: GAAGATGTCAGTCAAGATCCAGGCCTCTCCCACCTC...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGCTGATGTAAGCCTCTaGGGTCTCAAAGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLADVSL*GLKVDG
Trigger: CCCATCAACTTTGAGACCCCAGAGGCTTACATCAGC...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTTTCTGTTTTACCATTTaGAAGCGTTCATTATCAGTG +
Preference number: 4 (lower is better)
Translates to: KPIALITPALNPSVPGLGFCFTI*KRSLSV
Trigger: CACTGATAATGAACGCTTCCAAATGGTAAAACAGAA...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTACCTTGGATTCCCACTTaGGCGCATGTGCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVPWIPT*AHVLCS
Trigger: GCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGG...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGAAGACTATATCAGGCTaGGGTTTGAGATCACGGTTA +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRKTISG*GLRSRL
Trigger: TAACCGTGATCTCAAACCCCAGCCTGATATAGTCTT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGAAGACTATATCAGGCTaGGGTTTGAGATCACGGTTA +
Preference number: 4 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLKTISG*GLRSRL
Trigger: TAACCGTGATCTCAAACCCCAGCCTGATATAGTCTT...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGTGGGCTCTTCAGTTTaGTGCTGTCTAGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHVGSSV*CCLAHR
Trigger: CCTATGAGCTAGACAGCACCAAACTGAAGAGCCCAC...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACCCGTGGGGTTTGCTGTaGGCACATTACGGAACATGG +
Preference number: 4 (lower is better)
Translates to: RKLCKNALGQIELPHSCNPWGLL*AHYGTW
Trigger: CCATGTTCCGTAATGTGCCCACAGCAAACCCCACGG...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATCTCTTTCCCGGAGCTaGAATTTAGAATGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHESLSRS*NLECQG
Trigger: ACCCTGGCATTCTAAATTTCAGCTCCGGGAAAGAGA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTTTGAATTCCAGCCAGTaGGGAGTAATGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSLNSSQ*GVMKFM
Trigger: CATGAACTTCATTACTCCTCACTGGCTGGAATTCAA...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACTTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RKLCKNALGQIELPHSCNFAPEC*RWLTAG
Trigger: GCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAA...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAGTGAAAACTCGCGTGTaGGCAGTGTTCGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVVKTRV*AVFACL
Trigger: TAAACATGCGAACACTGCTCACACGCGAGTTTTCAC...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCATGTCACCCCTTCTATaGAGCCTTCCCTTACATAAT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIMSPLL*SLPLHN
Trigger: ATTATGTAAGGGAAGGCTTCATAGAAGGGGTGACAT...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCAATATGTCAGTTTCTaGTCCCATTCTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICQYVSF*SHSLQE
Trigger: TTCTTGGAGAGAATGGGATCAGAAACTGACATATTG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTGATCTGCCATCTCGCTaGATGTCCACATGGTACCAT +
Preference number: 4 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFDLPSR*MSTWYH
Trigger: ATGGTACCATGTGGACATTCAGCGAGATGGCAGATC...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAAGCGTTTCTCAGTCATaGTTCCCGTTTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSSVSQS*FPFQCC
Trigger: ACAACATTGAAACGGGAATCATGACTGAGAAACGCT...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATATCAGGCTGGGGTTTaGGATCACGGTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSYQAGV*DHGYSF
Trigger: AAATGAATAACCGTGATCTCAAACCCCAGCCTGATA...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR GCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHERALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGCCGTCACATGAATTTTaGTATGTGTTCAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEPSHEF*YVFSKA
Trigger: TGCTTTGCTGAACACATAGCAAAATTCATGTGACGG...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCATTGAGCTTCTGCCCTaGATACAAGGTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFIELLP*IQGLWS
Trigger: GGACCAGAGACCTTGTATGCAGGGCAGAAGCTCAAT...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp TTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCAGTCAATGTCACCATTTTTaGACAAGTCAATGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: FAVGTLRNMGEVISGLFSQCHHF*TSQCRE
Trigger: TTCTCTACATTGACTTGTGCAAAAATGGTGACATTG...ACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAGTGATGACGACATTGTaGCACTGGTTGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVVMTTL*HWLSFR
Trigger: CCTGAATGACAACCAGTGGCACAATGTCGTCATCAC...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTATGTCCTTTCCACCAATaGCTATTTGCGCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLCPFHQ*LFAPEC
Trigger: ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSSSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVSSRHF*WHGGRL
Trigger: CAGACGACCTCCATGCCACCAGAAATGTCTACTACT...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATTTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTATTTTTCTGTTTCTTGTaGCCGCTCTTCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVFFCFL*PLFELC
Trigger: GCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAA...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCTGAAATTAGATCCTaGGGGACCAGCTTTTCGAAT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEISEIRS*GTSFSN
Trigger: ATTCGAAAAGCTGGTCCCCCAGGATCTAATTTCAGA...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCAGTATGTACATAGGTaGCTAAGGAATTATACCAGC +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRQYVHR*LRNYTS
Trigger: GCTGGTATAATTCCTTAGCCACCTATGTACATACTG...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATGATGGATTATCCAATTaGCCAAGTAAGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHDGLSN*PSKCVL
Trigger: CAGCACACACTTACTTGGCCAATTGGATAATCCATC...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCCTGGTAACCAACATATaGATAAAGGACAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSLVTNI*IKDSCS
Trigger: TGAACAGCTGTCCTTTATCCATATGTTGGTTACCAG...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATACTGGTGCTGTCAGTaGACTGCTGCCATTAATCAC +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEYWCCQ*TAAINH
Trigger: GTGATTAATGGCAGCAGTCCACTGACAGCACCAGTA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTGGAAGAAGAGGTGCATaGAGGTGTAAGCCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFGRRGA*RCKPEE
Trigger: CTCTTCAGGCTTACACCTCCATGCACCTCTTCTTCC...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTCTGTTTTACCATTTaGAAGCGTTCATTATCAGTG +
Preference number: 4 (lower is better)
Translates to: RISSGDKDVVVVLLVSETFCFTI*KRSLSV
Trigger: CACTGATAATGAACGCTTCCAAATGGTAAAACAGAA...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDIHFAS*QFGHHP
Trigger: GGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAAT...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATATTCATTTTGCCAGCTaGCAATTTGGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHIHFAS*QFGHHP
Trigger: GGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAAT...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHECCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTATGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLCCSQN*WDFSNQ
Trigger: CTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACA...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCATGATAGCTTTTaGGTTCATATGGCAATAGTC +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSHHDSF*VHMAIV
Trigger: GACTATTGCCATATGAACTCAAAAGCTATCATGGTG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCACACCATGATAGCTTTTaGGTTCATATGGCAATAGTC +
Preference number: 4 (lower is better)
Translates to: FHSSSSSDICEISPSKDSHHDSF*VHMAIV
Trigger: GACTATTGCCATATGAACTCAAAAGCTATCATGGTG...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTTATCATCCGTCACATaGATTTTGCTATGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICELSSVT*ILLCVQ
Trigger: CTGAACACATAGCAAAATTCATGTGACGGATGATAA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR TCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGAGAGAACGAGAAATATaGGACATTACTGCTACAATG +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRREREI*DITATM
Trigger: CATTGTAGCAGTAATGTCTCATATTTCTCGTTCTCT...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGAGGGTTTGCTTAGAATaGTATACAGCCCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: ESWLYTPFHSSSSSDICERVCLE*YTALIS
Trigger: AGAAATAAGGGCTGTATATCATTCTAAGCAAACCCT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATTCTCTCCAAGAAGATTaGCTTATGCCTTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDSLQED*LMPFSP
Trigger: GGGGGAAAAAGGCATAAGTCAATCTTCTTGGAGAGA...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGCCCTAACAAACTTTaGTCTGCAACTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHSPNKL*SATLFL
Trigger: CAGAAACAAAGTTGCAGATCAAAGTTTGTTAGGGCT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATGGTCACTGTTGCCTTTaGTCACATTGGGACCGTTTC +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHGHCCL*SHWDRF
Trigger: GAAACGGTCCCAATGTGATCAAAGGCAACAGTGACC...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR TCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATC +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHATFED*SGKTLI
Trigger: GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGC...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTATTCCATGAGATGCAATaGAGAACTGCCAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVFHEMQ*RTARQK
Trigger: CTTTTGCCTGGCAGTTCTGCATTGCATCTCATGGAA...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGAGCGCTAAGTGTGTaGTTTATGATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVRALSV*FMIQQG
Trigger: GCCCTGCTGTATCATAAAGCACACACTTAGCGCTCT...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCCCGTCACATGAATTTTaGTATGTGTTCAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIPSHEF*YVFSKA
Trigger: TGCTTTGCTGAACACATAGCAAAATTCATGTGACGG...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATCCGTCACATGAATTTTaGTATGTGTTCAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHPSHEF*YVFSKA
Trigger: TGCTTTGCTGAACACATAGCAAAATTCATGTGACGG...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTCTCCAATGTACTTTTTaGAGTCTGTCATCAATCCAA +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICLQCTF*SLSSIQ
Trigger: TTGGATTGATGACAGACTGCAAAAAGTACATTGGAG...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAACACAGCATTATTCTTaGAGGGGTAGCTGTCACACT +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVTQHYS*RGSCHT
Trigger: AGTGTGACAGCTACCCCTGCAAGAATAATGCTGTGT...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACTCCTCTGCCTCAGTATaGATGACCATGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: RKLCKNALGQIELPHSCNSSASV*MTMGMM
Trigger: CATCATGCCCATGGTCATGCATACTGAGGCAGAGGA...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR GCA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATTTGTCATTGAGCTTCTaGCCTGCATACAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDLSLSF*PAYKVS
Trigger: AGAGACCTTGTATGCAGGGCAGAAGCTCAATGACAA...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTACACGGTTATTCATTTTaGCAGCTGGCAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVHGYSF*QLAIWA
Trigger: TGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTG...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAATAATGTTCATTCACTaGCCAGTTGTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLIMFIH*PVVHLQ
Trigger: CTGCAGGTGGACAACTGGCCAGTGAATGAACATTAT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGAGAAGTGAGCAAATaGAAGGACAGAGTTATCCAT +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHREVSK*KDRVIH
Trigger: ATGGATAACTCTGTCCTTCCATTTGCTCACTTCTCT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTAAATGCACTCCCTCCTaGTTATTCTATCATAGCAAT +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICKCTPS*LFYHSN
Trigger: ATTGCTATGATAGAATAACCAGGAGGGAGTGCATTT...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGAACAAAGGGTAGATaGATTATCCAATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHRTKGR*IIQLAK
Trigger: CTTGGCCAATTGGATAATCCATCTACCCTTTGTTCT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCATTGGAACCACAAGACTaGATTTTAAGTCATGACATT +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPLEPQD*ILSHDI
Trigger: AATGTCATGACTTAAAATCCAGTCTTGTGGTTCCAA...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAGTACCAGATGAGCCATaGCATTTTGACTCTAGAACC +
Preference number: 4 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVVPDEP*HFDSRT
Trigger: GGTTCTAGAGTCAAAATGCCATGGCTCATCTGGTAC...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATGCATACAAGGTCTCTaGTCCTTTGCTGGAGTTACA +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHECIQGL*SFAGVT
Trigger: TGTAACTCCAGCAAAGGACCAGAGACCTTGTATGCA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTCTGTTTTACCATTTaGAAGCGTTCATTATCAGTG +
Preference number: 4 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMFCFTI*KRSLSV
Trigger: CACTGATAATGAACGCTTCCAAATGGTAAAACAGAA...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACGTGGGCTCTTCAGTTTaGTGCTGTCTAGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: RKLCKNALGQIELPHSCNVGSSV*CCLAHR
Trigger: CCTATGAGCTAGACAGCACCAAACTGAAGAGCCCAC...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CCA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCATTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR TCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATTCTCTTTCCCGGAGCTaGAATTTAGAATGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHSLSRS*NLECQG
Trigger: ACCCTGGCATTCTAAATTTCAGCTCCGGGAAAGAGA...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000428277.6
CDS-3UTR TCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATTCATTGGCTTTCTTCTaGGTGGCTTTCACTTTGATG +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHSLAFF*VAFTLM
Trigger: CATCAAAGTGAAAGCCACTCAGAAGAAAGCCAATGA...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR TCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATTATCAGGCTGGGGTTTaGGATCACGGTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHYQAGV*DHGYSF
Trigger: AAATGAATAACCGTGATCTCAAACCCCAGCCTGATA...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR GCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCGGTTTTGATCCTGCTTaGTCCCACTTTAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFGFDPA*SHFKGL
Trigger: CAAACCCTTAAAGTGGGAGCAAGCAGGATCAAAACC...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCTTTCATTTCAAATATaGTCGAGTCCTTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSLSFQI*SSPLYS
Trigger: CGAGTACAAAGGACTCGAGCATATTTGAAATGAAAG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR GCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGGTCTCTGGTCCTTTaGTGGAGTTACAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFRSLVL*WSYSLS
Trigger: GGATAAACTGTAACTCCAGCAAAGGACCAGAGACCT...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGGTCTCTGGTCCTTTaGTGGAGTTACAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVRSLVL*WSYSLS
Trigger: GGATAAACTGTAACTCCAGCAAAGGACCAGAGACCT...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTTGGAACCACAAGACTaGATTTTAAGTCATGACATT +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICLEPQD*ILSHDI
Trigger: AATGTCATGACTTAAAATCCAGTCTTGTGGTTCCAA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATATCATTGATGAGGTCTaGCAGGCGTCCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHIIDEV*QASIQV
Trigger: GACTTGAATGGACGCCTGCCAGACCTCATCAATGAT...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTTCTGTTTTACCATTTaGAAGCGTTCATTATCAGTG +
Preference number: 4 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRFCFTI*KRSLSV
Trigger: CACTGATAATGAACGCTTCCAAATGGTAAAACAGAA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CCA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PESWLYTPFHSSSSSDICLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
3UTR CAA 72 bp TATGGTTTTGATCCTGCTTGCTCCCACTTTAAGGGTTaGCTTAGAATGATATACAGCCCTTATTTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: YGFDPACSHFKG*LRMIYSPYFCL
Trigger: TAGGCAGAAATAAGGGCTGTATATCATTCTAAGCAAACCCTTAAAGTGGGAGCAAGCAGGATCAAAACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CAA 72 bp AGTTATTACCTTTCATTTCAAATATGCTCGAGTCCTTaGTACTCGACAAAGCAGCCCTTGACCTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: SYYLSFQICSSP*YSTKQPLTLNF
Trigger: GAAGTTCAAGGTCAAGGGCTGCTTTGTCGAGTACAAAGGACTCGAGCATATTTGAAATGAAAGGTAATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
3UTR CAA 72 bp TGGCTTGGTGTCTCTTGGAATTATTTGCTCTTCTACTaGGGCCATGTAACCACTTCAAAAAGGTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: WLGVSWNYLLFY*GHVTTSKRLEL
Trigger: CAATTCTAACCTTTTTGAAGTGGTTACATGGCCCAAGTAGAAGAGCAAATAATTCCAAGAGACACCAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTACAACTGTGCCAATGTTaGAGACAACTCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVQLCQC*RQLQFS
Trigger: GGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTG...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACATGGCTATTTGCGCCTaGGTGTTGAAGATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: RKLCKNALGQIELPHSCNMAICA*VLKMVN
Trigger: GTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR TCA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR TCA 90 bp CTAGATTACAGTGAAGAACAAAGGGTAGATGGATTATCCAATTGGCCAAGTAAGCACCATGATAGCTTTTaGGTTCATATGGCAATAGTC +
Preference number: 4 (lower is better)
Translates to: LDYSEEQRVDGLSNWPSKHHDSF*VHMAIV
Trigger: GACTATTGCCATATGAACTCAAAAGCTATCATGGTG...CTTACTTGGCCAATTGGATAATCCATCTACCCTTTGTTCTTCACTGTAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTCAAGTAAGTGTGTGCTaGGAGAACGAGAAATATGAG +
Preference number: 4 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFQVSVC*ENEKYE
Trigger: CTCATATTTCTCGTTCTCTCAGCACACACTTACTTG...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCATCTCTCCAAGAAGATTaGCTTATGCCTTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSASLQED*LMPFSP
Trigger: GGGGGAAAAAGGCATAAGTCAATCTTCTTGGAGAGA...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAAAAGACCTTTCCAGTTaGACAGAAGATTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEKDLSS*TEDLGS
Trigger: AGATCCCAAATCTTCTGTTCAACTGGAAAGGTCTTT...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR GCA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCATTCCATGAGATGCAATaGAGAACTGCCAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAFHEMQ*RTARQK
Trigger: CTTTTGCCTGGCAGTTCTGCATTGCATCTCATGGAA...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281127.11
CDS-3UTR GCA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAGTACCACATGGTATTTaGCGTCATTTACAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAVPHGI*RHLQGF
Trigger: GAACCCCTGTAAATGACGGCAAATACCATGTGGTAC...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATGGCTACCATTTAGATTaGACTTTTTGCCCCATGTCG +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHGYHLD*TFCPMS
Trigger: CGACATGGGGCAAAAAGTGCAATCTAAATGGTAGCC...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGCTCACATAGAGAATaGACATGTTCCCATAAAATT +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHSSHRE*TCSHKI
Trigger: AATTTTATGGGAACATGTGCATTCTCTATGTGAGCT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR GCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTATTAAACATGAGGCTCTaGAGATGGCCAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVLNMRL*RWPIKL
Trigger: CAGCTTTATTGGCCATCTGCAGAGCCTCATGTTTAA...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR GCA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCACACGGTTATTCATTTTaGCAGCTGGCAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAHGYSF*QLAIWA
Trigger: TGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTG...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATAAGTTACACGCACACTaGTCAGAACCAGATAAGGGT +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHKLHAH*SEPDKG
Trigger: ACCCTTATCTGGTTCTGACCAGTGTGCGTGTAACTT...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp GACCAGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCTTGTGTGACCTTTTGTaGTTCCATCACGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: DQLFESIYHPSHEFCYVFLCDLL*FHHELN
Trigger: GTTCAACTCGTGATGGAACCACAAAAGGTCACACAA...GAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATTTAACTTTTTGGTCCTaGTTAGTCATGCATATAGCA +
Preference number: 4 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHLTFWS*LVMHIA
Trigger: TGCTATATGCATGACTAACCAGGACCAAAAAGTTAA...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAAGAGAACGAGAAATATaGGACATTACTGCTACAATG +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLREREI*DITATM
Trigger: CATTGTAGCAGTAATGTCTCATATTTCTCGTTCTCT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGCATTACAGACTCACTTaGAGTTATGGAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSHYRLT*SYGTSK
Trigger: CTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATG...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp CTAGATTACAGTGAAGAACAAAGGGTAGATGGATTATCCAATTGGCCAAGTAAGATTTGGCTGGGTGAATaGACAGGAACAATATTGTTA +
Preference number: 4 (lower is better)
Translates to: LDYSEEQRVDGLSNWPSKIWLGE*TGTILL
Trigger: TAACAATATTGTTCCTGTCCATTCACCCAGCCAAAT...CTTACTTGGCCAATTGGATAATCCATCTACCCTTTGTTCTTCACTGTAATCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAAATGCACTCCCTCCTaGTTATTCTATCATAGCAAT +
Preference number: 4 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSKCTPS*LFYHSN
Trigger: ATTGCTATGATAGAATAACCAGGAGGGAGTGCATTT...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CCA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGAACAAAGGGTAGATaGATTATCCAATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVRTKGR*IIQLAK
Trigger: CTTGGCCAATTGGATAATCCATCTACCCTTTGTTCT...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR TCA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACGGAACAAGTAAGCCATaGAGTCTTCTACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: RKLCKNALGQIELPHSCNGTSKP*SLLPFS
Trigger: ACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCC...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR GCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAAGCTCACATAGAGAATaGACATGTTCCCATAAAATT +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLSSHRE*TCSHKI
Trigger: AATTTTATGGGAACATGTGCATTCTCTATGTGAGCT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATCAGTATGTACATAGGTaGCTAAGGAATTATACCAGC +
Preference number: 4 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHQYVHR*LRNYTS
Trigger: GCTGGTATAATTCCTTAGCCACCTATGTACATACTG...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CCA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTATTACCAAGGAGAAGGTaGTGTAAAAATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLLPRRR*CKNLHH
Trigger: ATGATGAAGATTTTTACACCACCTTCTCCTTGGTAA...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
3UTR CAA 72 bp AAACCTTCCTACTCATATCTTCCTCCAATGTACTTTTaGCAGTCTGTCATCAATCCAAATTATGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: KPSYSYLPPMYF*QSVINPNYGFD
Trigger: ATCAAAACCATAATTTGGATTGATGACAGACTGCAAAAAGTACATTGGAGGAAGATATGAGTAGGAAGGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS CCA 90 bp GAGCAGCCACCCAAACCAACGTGGCACGGGGTGGAGGGAGGTGGGTaGGCGAAATCAGCGAGAGCGCAAGAGGAGGTGCCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EQPPKPTWHGVEGGG*AKSARAQEEVPGRL
Trigger: CAGCCTGCCAGGCACCTCCTCTTGCGCTCTCGCTGATTTCGCCCACCCACCTCCCTCCACCCCGTGCCACGTTGGTTTGGGTGGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS CCA 90 bp TGCGGAGCAGCCACCCAAACCAACGTGGCACGGGGTGGAGGGAGGTaGGTGGGCGAAATCAGCGAGAGCGCAAGAGGAGGTGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: CGAATQTNVARGGGR*VGEISESARGGAWQ
Trigger: CTGCCAGGCACCTCCTCTTGCGCTCTCGCTGATTTCGCCCACCCACCTCCCTCCACCCCGTGCCACGTTGGTTTGGGTGGCTGCTCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS CCA 90 bp AGGAACCCGGTGCGGAGCAGCCACCCAAACCAACGTGGCACGGGGTaGAGGGAGGTGGGTGGGCGAAATCAGCGAGAGCGCAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RNPVRSSHPNQRGTG*REVGGRNQRERKRR
Trigger: CCTCCTCTTGCGCTCTCGCTGATTTCGCCCACCCACCTCCCTCCACCCCGTGCCACGTTGGTTTGGGTGGCTGCTCCGCACCGGGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS CCA 90 bp ATCCCAAGCGTCCAGGCCGGCCGGCGAGGAGGGCTCCGTCTCGCGTaGATTCTCAGGTGCATGGTCAACGCACGGGACCACTACAGATGG +
Preference number: 5 (lower is better)
Translates to: IPSVQAGRRGGLRLA*ILRCMVNARDHYRW
Trigger: CCATCTGTAGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCCACGCGAGACGGAGCCCTCCTCGCCGGCCGGCCTGGACGCTTGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSRRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS TCA 90 bp AGGCGGGCGGGCGCCTGCGAAGTGCGCGGACCAGGGAGGCACAGGTaGAGTGAAGCGAGGAGTTGGGGAGCCAAATTCACAAATGGGCAA +
Preference number: 5 (lower is better)
Translates to: RRAGACEVRGPGRHR*SEARSWGAKFTNGQ
Trigger: TTGCCCATTTGTGAATTTGGCTCCCCAACTCCTCGCTTCACTTCACCTGTGCCTCCCTGGTCCGCGCACTTCGCAGGCGCCCGCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557594.5
CDS-3UTR CAA 90 bp GCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: AALRALLLLLHERAVALGRRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...GCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGGGTGAAGCCCTCCCATaGTTGCATGCAGACCCCCTG +
Preference number: 5 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAGEALP*LHADPL
Trigger: CAGGGGGTCTGCATGCAACAATGGGAGGGCTTCACC...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS TCA 90 bp TTGGACAGCACGGCAGTCTCGGCACAGTCCATGCTGAAGCGGAGCTaGACGCGGCCATCCACCAGGGAGAGGCATAGGAAGTCGCAGACG +
Preference number: 5 (lower is better)
Translates to: LDSTAVSAQSMLKRS*TRPSTRERHRKSQT
Trigger: CGTCTGCGACTTCCTATGCCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCATGGACTGTGCCGAGACTGCCGTGCTGTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS GCA 90 bp TCAAGGAGGAGAAGGTGCAGGAGAGTAGGAAGAAGCCTTCAGCGATaGACTCCTCCCAGCGGACCCCCAAATGCCCCAGCCAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SRRRRCRRVGRSLQR*TPPSGPPNAPAREA
Trigger: GGCCTCCCTGGCTGGGGCATTTGGGGGTCCGCTGGGAGGAGTGCATCGCTGAAGGCTTCTTCCTACTCTCCTGCACCTTCTCCTCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CCA 90 bp CCGGCCGGCGAGGAGGGCTCCGTCTCGCGTGGATTCTCAGGTGCATaGTCAACGCACGGGACCACTACAGATGGGCAGTTTGAATTCCAG +
Preference number: 5 (lower is better)
Translates to: PAGEEGSVSRGFSGA*STHGTTTDGQFEFQ
Trigger: CTGGAATTCAAACTGCCCATCTGTAGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCCACGCGAGACGGAGCCCTCCTCGCCGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS CCA 90 bp CAGGGTGAAGAAAACCGAGTGGAGTGTGGAGCTCATTGTCGCTGCTaGGACAGAGCCCGGAGGAGCAGACAGGCCAGGGAACAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: QGEENRVECGAHCRC*DRARRSRQAREQPG
Trigger: TCCGGGCTGTTCCCTGGCCTGTCTGCTCCTCCGGGCTCTGTCCCAGCAGCGACAATGAGCTCCACACTCCACTCGGTTTTCTTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS-3UTR CAA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAAPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTCCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAEIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIARRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS-3UTR CAA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGCCGGCTCCGTGGGGTTaGCTGTGGGCACATTACGGA +
Preference number: 5 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVPAPWG*LWAHYG
Trigger: TCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGG...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGCCGGCTCCGTGGGGTTaGCTGTGGGCACATTACGGA +
Preference number: 5 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWPAPWG*LWAHYG
Trigger: TCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGG...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCCGGCTCCGTGGGGTTaGCTGTGGGCACATTACGGA +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPPAPWG*LWAHYG
Trigger: TCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGG...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS GCA 90 bp AGCATCAGCACCGTGCGCAGGCGGTCACGGCTCACCATGAGGAAGTaGCAGCTGCTGTCATTCACCTGCTTGTTGGACAGCACGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SISTVRRRSRLTMRK*QLLSFTCLLDSTAV
Trigger: GACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGACCGCCTGCGCACGGTGCTGATGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CCA 90 bp CAGCAGCAGCAGCCACCGCAGCCAGAGGAAGAGAATAAGAAGGACTaGAGGGAAAGAGGAGAGGAGGAGGAACCCGGTGCGGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: QQQQPPQPEEENKKD*RERGEEEEPGAEQP
Trigger: TGGCTGCTCCGCACCGGGTTCCTCCTCCTCTCCTCTTTCCCTCCAGTCCTTCTTATTCTCTTCCTCTGGCTGCGGTGGCTGCTGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS-3UTR CAA 90 bp CTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAACCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: LPWSDKQGNPASEVMDREPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...TTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGAGAGGGGAGGACAGGTaGCCTCTCCCTCTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPRGEDR*PLPLCE
Trigger: CTCACAGAGAGGGAGAGGCAACCTGTCCTCCCCTCT...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGAAGCCCTCCCATTGTaGCATGCAGACCCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: AALRALLLLLHERAVALGEALPL*HADPLV
Trigger: AACCAGGGGGTCTGCATGCAACAATGGGAGGGCTTC...GCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS TCA 90 bp CGCCATCAAGCATCAGCACCGTGCGCAGGCGGTCACGGCTCACCATaGGGAAGTGCCAGCTGCTGTCATTCACCTGCTTGTTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: RHQASAPCAGGHGSP*GSASCCHSPACWTA
Trigger: TGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGACCGCCTGCGCACGGTGCTGATGCTTGATGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CCA 90 bp AGGGACCCCAGCAGGATGCTGACCTTCAGGGTGAAGAAAACCGAGTaGAGTGTGGAGCTCATTGTCGCTGCTGGGACAGAGCCCGGAGGA +
Preference number: 5 (lower is better)
Translates to: RDPSRMLTFRVKKTE*SVELIVAAGTEPGG
Trigger: TCCTCCGGGCTCTGTCCCAGCAGCGACAATGAGCTCCACACTCCACTCGGTTTTCTTCACCCTGAAGGTCAGCATCCTGCTGGGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGAATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: ALRALLLLLHERAVALGGIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACACGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTRRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCTCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCGGTTCCAGCCGTCCTaGCACACAGCATTATTCTTG +
Preference number: 5 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAARFQPS*HTALFL
Trigger: CAAGAATAATGCTGTGTGCAAGGACGGCTGGAACCG...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACGGTTCCAGCCGTCCTaGCACACAGCATTATTCTTG +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALRFQPS*HTALFL
Trigger: CAAGAATAATGCTGTGTGCAAGGACGGCTGGAACCG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACGAGAGGCCACGAGCTTaGGGAGGTTGCTGTACATGC +
Preference number: 5 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNERPRA*GGCCTC
Trigger: GCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTC...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp TGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGTTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAG +
Preference number: 5 (lower is better)
Translates to: WPLFELCCFSFMSVPLLWLPAGN*GTIPDE
Trigger: CTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA...CCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS GCA 90 bp CGGTCACGGCTCACCATGAGGAAGTGCCAGCTGCTGTCATTCACCTaGTTGTTGGACAGCACGGCAGTCTCGGCACAGTCCATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RSRLTMRKCQLLSFT*LLDSTAVSAQSMLK
Trigger: CTTCAGCATGGACTGTGCCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGACCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS-3UTR CAA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATCCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGGGCTTGTGTGACCTTTaGTGGTTCCATCACGAGTTG +
Preference number: 5 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAGLCDL*WFHHEL
Trigger: CAACTCGTGATGGAACCACAAAAGGTCACACAAGCC...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCGACAAAGCAGCCCTaGACCTTGAACTTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELSTKQP*TLNFSS
Trigger: GCTTGAGAAGTTCAAGGTCAAGGGCTGCTTTGTCGA...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTATATGCTCGAGTCCTTaGTACTCGACAAAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFICSSP*YSTKQP
Trigger: GGGCTGCTTTGTCGAGTACAAAGGACTCGAGCATAT...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTGGAGTGTGGAGCTCATaGTCGCTGCTGGGACAGAGC +
Preference number: 5 (lower is better)
Translates to: PWSDKQGNPASEVMDRESGVWSS*SLLGQS
Trigger: GCTCTGTCCCAGCAGCGACAATGAGCTCCACACTCC...AGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGATCATTCACCTGCTTGTaGGACAGCACGGCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: ALRALLLLLHERAVALGGSFTCL*DSTAVS
Trigger: CGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGA...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGAGCAGCAAGTACAGGTaGCCATCGAGGAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVSSKYR*PSRSST
Trigger: CGTGGAACTCCTCGATGGCAACCTGTACTTGCTGCT...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCGGTCACTGTTGCCTTaGATCACATTGGGACCGTTT +
Preference number: 5 (lower is better)
Translates to: QNLLSPSDRWDLAAAVAERSLLP*ITLGPF
Trigger: AAACGGTCCCAATGTGATCAAAGGCAACAGTGACCG...CTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGACGAGCTTTGGGAGGTaGCTGTACATGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: LPAGNLGTIPDEEEAVKRTSFGR*LYMPWA
Trigger: GGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGT...CCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGATGCAGACCCCCTGGTaGGCACATGAATCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPMQTPW*AHESSW
Trigger: CCAGGAAGATTCATGTGCCAACCAGGGGGTCTGCAT...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTAGGTCTAAAGTCCTaGGATTCCCACTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSLGLKS*DSHLGA
Trigger: TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAA...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGCCGGCTCCGTGGGGTTaGCTGTACTCGGCTCACATT +
Preference number: 5 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVPAPWG*LYSAHI
Trigger: AATGTGAGCCGAGTACAGCAAACCCCACGGAGCCGG...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428277.6
ENST00000554719.5
CDS-3UTR CAA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSRTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTCGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELRTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTACGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALRTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGTCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRALFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFALFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGCTGTCATTCACCTGCTaGTTGGACAGCACGGCAGTC +
Preference number: 5 (lower is better)
Translates to: HHNHRCLGPTSKVTPPQRLSFTC*LDSTAV
Trigger: GACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAG...CCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTATTCTCCTCTCGAGCTaGTTCACTCATCATGAGGTG +
Preference number: 5 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSILLSS*FTHHEV
Trigger: CACCTCATGATGAGTGAACAAGCTCGAGAGGAGAAT...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTAGGTTGCGTGTCACTTaGACATCATGCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIARLRVT*TSCQAL
Trigger: CAACGCCTGGCATGATGTCAAAGTGACACGCAACCT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGTCACCTGCCGGAGGTaGCGTGTCACTTTGACATCA +
Preference number: 5 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYVTCRR*RVTLTS
Trigger: TGATGTCAAAGTGACACGCAACCTCCGGCAGGTGAC...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACATGCCATCCACAGAGATaGTCACCTGCCGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTCHPQR*SPAGGC
Trigger: GCAACCTCCGGCAGGTGACAATCTCTGTGGATGGCA...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGCTGTCGAATGTTCTaGCTGCGCCCATCAATGAAT +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALSCRMF*LRPSMN
Trigger: ATTCATTGATGGGCGCAGCAAGAACATTCGACAGCT...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGCGGTTCCAGCCGTCCTaGCACACAGCATTATTCTTG +
Preference number: 5 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRRFQPS*HTALFL
Trigger: CAAGAATAATGCTGTGTGCAAGGACGGCTGGAACCG...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACTGCCACTCGTTGTCATaGAGCTTCTGCCCTGCATAC +
Preference number: 5 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNCHSLS*SFCPAY
Trigger: GTATGCAGGGCAGAAGCTCAATGACAACGAGTGGCA...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTTGCTGTACATGCCTaGGGCCAGACCAGCCATATA +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAVAVHA*GQTSHI
Trigger: TATATGGCTGGTCTGGCCCAAGGCATGTACAGCAAC...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTATCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALSRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGCCGGCTCCGTGGGGTTaGCTGTGGGCACATTACGGA +
Preference number: 5 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLPAPWG*LWAHYG
Trigger: TCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGG...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS TCA 90 bp AGGTCTGGCAGGCGTCCATTCAAGTCCACTGATGCTAGACAGCCCTaGAAGCCATCTCGAGAGGCCACGAGCTTTGGGAGGTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RSGRRPFKSTDARQP*KPSREATSFGRLLY
Trigger: GTACAGCAACCTCCCAAAGCTCGTGGCCTCTCGAGATGGCTTTCAGGGCTGTCTAGCATCAGTGGACTTGAATGGACGCCTGCCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS-3UTR CAA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: KTFCLPATAGTLPQPWLSPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: KEVSRPAEVVEPPSGSRAPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...CGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGGAGAATCGTTTGAGGTaGAGAGGCAGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPENRLR*RGRGCS
Trigger: ACTGCAACCTCTGCCTCTCAACCTCAAACGATTCTC...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCCTCCAATGTACTTTTaGCAGTCTGTCATCAATCCA +
Preference number: 5 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCPPMYF*QSVINP
Trigger: TGGATTGATGACAGACTGCAAAAAGTACATTGGAGG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGGGTAGAAGGGAGGGGTaGTTGGAGGTGCGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVGRREG*LEVRKA
Trigger: TGCTTTTCGCACCTCCAACAACCCCTCCCTTCTACC...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGAGTGTGGAGCTCATaGTCGCTGCTGGGACAGAGC +
Preference number: 5 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLGVWSS*SLLGQS
Trigger: GCTCTGTCCCAGCAGCGACAATGAGCTCCACACTCC...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCAGCTGTCGAATGTTCTaGCTGCGCCCATCAATGAAT +
Preference number: 5 (lower is better)
Translates to: AALRALLLLLHERAVALGSCRMF*LRPSMN
Trigger: ATTCATTGATGGGCGCAGCAAGAACATTCGACAGCT...GCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACTATGGTCTCCCACCATaGTACCCTCAGCCACATCAT +
Preference number: 5 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNYGLPP*YPQPHH
Trigger: ATGATGTGGCTGAGGGTACAATGGTGGGAGACCATA...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGAGGGGGCGGTCACTGTaGCCTTTGATCACATTGGGA +
Preference number: 5 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVRGRSL*PLITLG
Trigger: TCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCT...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CCATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCAGGGGGCGGTCACTGTaGCCTTTGATCACATTGGGA +
Preference number: 5 (lower is better)
Translates to: PSSSQPSLPWSDKQGNPARGRSL*PLITLG
Trigger: TCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCT...GGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACATTGTGCCACTGGTaGTCATTCAGGGGGCGGTCA +
Preference number: 5 (lower is better)
Translates to: SKRSSGEGSFQACGSGGATLCHW*SFRGRS
Trigger: TGACCGCCCCCTGAATGACAACCAGTGGCACAATGT...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGCCGGCTCCGTGGGGTTaGCTGTGGGCACATTACGGA +
Preference number: 5 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLPAPWG*LWAHYG
Trigger: TCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGG...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACCCGGCTCCGTGGGGTTaGCTGTGGGCACATTACGGA +
Preference number: 5 (lower is better)
Translates to: PTWAHVLCSHLRRLKWKDPAPWG*LWAHYG
Trigger: TCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGG...GTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS GCA 90 bp TACGTAGCGCCAGCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC +
Preference number: 5 (lower is better)
Translates to: YVAPAQMEMQKSPVF*VAHAGSCRPELFLF
Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGCTGGCGCTACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556003.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPRTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACCGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNRTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVSTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTGTGGGCACATTACGGAACTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GTRLIPGSVGFAVGTLRNSTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...GTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFAILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAAILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPARRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGCCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTGGACAGGAACAATATaGTTACGTAAAGCCAATAGC +
Preference number: 5 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCWTGTI*LRKANS
Trigger: GCTATTGGCTTTACGTAACAATATTGTTCCTGTCCA...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAATATGGTGGGAGGCTaGGAAAGAAGACATCTAAGA +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALNMVGG*ERRHLR
Trigger: TCTTAGATGTCTTCTTTCCAAGCCTCCCACCATATT...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCTTGGGTATCTGACCTaGTCCTTTAATATATCCAGA +
Preference number: 5 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCLGYLT*SFNISR
Trigger: TCTGGATATATTAAAGGACAAGGTCAGATACCCAAG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCTATTTGCTCTTCTACTaGGGCCATGTAACCACTTCA +
Preference number: 5 (lower is better)
Translates to: QQGTKPSVSQRPLGPCRSYLLFY*GHVTTS
Trigger: TGAAGTGGTTACATGGCCCAAGTAGAAGAGCAAATA...GCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAGTCTCTTGGAATTATTaGCTCTTCTACTTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALVSWNY*LFYLGH
Trigger: ATGGCCCAAGTAGAAGAGCAAATAATTCCAAGAGAC...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTGTCACCTGCCGGAGGTaGCGTGTCACTTTGACATCA +
Preference number: 5 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPVTCRR*RVTLTS
Trigger: TGATGTCAAAGTGACACGCAACCTCCGGCAGGTGAC...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTACTGCAATGAAGTCATaGCCATCACCACTATTGAAG +
Preference number: 5 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSTAMKS*PSPLLK
Trigger: CTTCAATAGTGGTGATGGCAATGACTTCATTGCAGT...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTGTACATGCCTaGGGCCAGACCAGCCATATA +
Preference number: 5 (lower is better)
Translates to: LFLVAALRALLLLLHERAVAVHA*GQTSHI
Trigger: TATATGGCTGGTCTGGCCCAAGGCATGTACAGCAAC...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACGAGCTTTGGGAGGTaGCTGTACATGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKTSFGR*LYMPWA
Trigger: GGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGT...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTGAGAGGCCACGAGCTTaGGGAGGTTGCTGTACATGC +
Preference number: 5 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPERPRA*GGCCTC
Trigger: GCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTC...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTAT +
Preference number: 5 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELSHLRR*KWKDSY
Trigger: ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCT...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTAT +
Preference number: 5 (lower is better)
Translates to: GPPEKEVSRPAEVVEPPSSHLRR*KWKDSY
Trigger: ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCT...GGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCCTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SRAQNLLSPSDRWDLAAALVSET*LGLKSL
Trigger: CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG...GGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAG +
Preference number: 5 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPLPAGN*GTIPDE
Trigger: CTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: AGTLPQPWLSFRERCIAVSRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...CACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCCCGGCTCCGTGGGGTTaGCTGTACTCGGCTCACATT +
Preference number: 5 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFPAPWG*LYSAHI
Trigger: AATGTGAGCCGAGTACAGCAAACCCCACGGAGCCGG...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428277.6
ENST00000554719.5
CDS TCA 90 bp GGTAGCTGTCACACTGCTTGGCACTCATCCGTGAACAGGAGGACTTaGCACCCGCAGCATTCTGCATCTCTGCCAGCTGTCGAATGTTCT +
Preference number: 5 (lower is better)
Translates to: GSCHTAWHSSVNRRT*HPQHSASLPAVECS
Trigger: AGAACATTCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS GCA 90 bp TTGGCACTCATCCGTGAACAGGAGGACTTGACACCCGCAGCATTCTaGATCTCTGCCAGCTGTCGAATGTTCTTGCTGCGCCCATCAATG +
Preference number: 5 (lower is better)
Translates to: LALIREQEDLTPAAF*ISASCRMFLLRPSM
Trigger: CATTGATGGGCGCAGCAAGAACATTCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAERRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCATGTGCTTTCCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: GDFVRSKVLGFPLGRMCFPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...AAAGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTTGGACAGGAACAATATaGTTACGTAAAGCCAATAGC +
Preference number: 5 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFWTGTI*LRKANS
Trigger: GCTATTGGCTTTACGTAACAATATTGTTCCTGTCCA...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTAAAGAACTATGTGTTTaGTACTCTGGCATGACATGG +
Preference number: 5 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSKELCV*YSGMTW
Trigger: CCATGTCATGCCAGAGTACAAAACACATAGTTCTTT...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp GTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGATTCCCTTGATACTTaGGAACTTCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: VSRPAEVVEPPSGSRALSDSLDT*ELQPLQ
Trigger: TTGCAAAGGTTGAAGTTCCAAAGTATCAAGGGAATC...ACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AAGCCAATAGCTCTGATAACACCAGCCCTAAACCCATCTGTTCCGGGTTTGGGTGCGAAAAGCAGGTCCTaGGTGGCTGGAGATGCCGAG +
Preference number: 5 (lower is better)
Translates to: KPIALITPALNPSVPGLGAKSRS*VAGDAE
Trigger: CTCGGCATCTCCAGCCACCAAGGACCTGCTTTTCGC...ACCCAAACCCGGAACAGATGGGTTTAGGGCTGGTGTTATCAGAGCTATTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAAAAGACCTTTCCAGTaGAACAGAAGATTTGGGATC +
Preference number: 5 (lower is better)
Translates to: EVSRPAEVVEPPSGSRALKRPFQ*NRRFGI
Trigger: GATCCCAAATCTTCTGTTCAACTGGAAAGGTCTTTT...TAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCTGGAAACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GAGGAGGAAGCTGTGAAGCGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCGTGGATCCGGAGGCCTaGACTCAAGGAGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: EEEAVKRISSGDKDVVVVVDPEA*TQGGEG
Trigger: ACCTTCTCCTCCTTGAGTCAAGGCCTCCGGATCCAC...GACTACTACCACATCTTTATCCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTGCAAGTCAGCGGTACTaGGGCTTCCTCCTACATAGA +
Preference number: 5 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPASQRY*GFLLHR
Trigger: TCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTGC...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCCGTGAACAGGAGGACTaGACACCCGCAGCATTCTGC +
Preference number: 5 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFREQED*TPAAFC
Trigger: GCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACG...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGACATTGTGCCACTGGTaGTCATTCAGGGGGCGGTCA +
Preference number: 5 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVTLCHW*SFRGRS
Trigger: TGACCGCCCCCTGAATGACAACCAGTGGCACAATGT...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCTTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAG +
Preference number: 5 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFLPAGN*GTIPDE
Trigger: CTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp AGGCCTGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCCTTGGACAAATAGAATaGCCACATTCTTGTAACTTG +
Preference number: 5 (lower is better)
Translates to: RPAEVVEPPSGSRALSVCLGQIE*PHSCNL
Trigger: CAAGTTACAAGAATGTGGCAATTCTATTTGTCCAAG...GCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555387.1
CDS TCA 90 bp CCATACTTGAGATCCAGAATTAACCCCTTGAAGCCGGGCATGGCCTaGACTCCATCAAGGGTCAGGGCAGAAGGTCGTATGTCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: PYLRSRINPLKPGMA*TPSRVRAEGRMSVG
Trigger: CCCTACTGACATACGACCTTCTGCCCTGACCCTTGATGGAGTTCAGGCCATGCCCGGCTTCAAGGGGTTAATTCTGGATCTCAAGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS TCA 90 bp ATTATTCTTGCAGGGGTAGCTGTCACACTGCTTGGCACTCATCCGTaGACAGGAGGACTTGACACCCGCAGCATTCTGCATCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: IILAGVAVTLLGTHP*TGGLDTRSILHLCQ
Trigger: CTGGCAGAGATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCTACCCCTGCAAGAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CCA 90 bp GACGTCAGGTGCCCTGCCAAGCTCGAGTTAATTTCACTGCAGGAATaGAAGTGCAGAGTGCATATCCCTGAGAAAGCACAACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: DVRCPAKLELISLQE*KCRVHIPEKAQPQG
Trigger: CCCCTGAGGTTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCGAGCTTGGCAGGGCACCTGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553631.1
CDS-3UTR CAA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTGGGGTTCTCTCCTCTTaGATGGAGATGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPGVLSS*MEMSTV
Trigger: CACAGTTGACATCTCCATCAAAGAGGAGAGAACCCC...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELSLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFSLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCATTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LVSETLLGLKSLDSHLGAFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: SKRSSGEGSFQACGSGGALFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTCCCCTACTGTCTGGTTaGATAACAGACTTTAATATT +
Preference number: 5 (lower is better)
Translates to: TFCLPATAGTLPQPWLSFPLLSG*ITDFNI
Trigger: AATATTAAAGTCTGTTATCAAACCAGACAGTAGGGG...AAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTAATATGGTGGGAGGCTaGGAAAGAAGACATCTAAGA +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIANMVGG*ERRHLR
Trigger: TCTTAGATGTCTTCTTTCCAAGCCTCCCACCATATT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGGTGGCTTGGTGTCTCTaGGAATTATTTGCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPVAWCL*ELFALL
Trigger: TAGAAGAGCAAATAATTCCAAGAGACACCAAGCCAC...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CCATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCAGAGGATCTCTCCCTTaGGCAATAGAAGTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: PSSSQPSLPWSDKQGNPARGSLP*AIEVGK
Trigger: CTTTCCCACTTCTATTGCCAAAGGGAGAGATCCTCT...GGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTGTGTGTGTGGTAGAGACGTTGGTCTaGAACTGGAAACTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TLPQPWLSFRERCIAVCVVETLV*NWKLRS
Trigger: TGACCTGAGTTTCCAGTTCAAGACCAACGTCTCTAC...CACACACACAGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp AACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTACAGGCCGATTATATTaGAAGGGGATTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: NLLSPSDRWDLAAAVAELTGRLY*KGIFCF
Trigger: AAAACAGAAAATCCCCTTCAAATATAATCGGCCTGT...AAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR CAA 90 bp GATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTGCCGAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTAT +
Preference number: 5 (lower is better)
Translates to: DTAGHKTFCLPATAGTLPSHLRR*KWKDSY
Trigger: ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCT...CGGCAAGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCGTTGCTCTGGGCGGACTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ALRALLLLLHERAVALGGLVSET*LGLKSL
Trigger: CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG...TCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCCAAGGTCTCTGGTCCTTaGCCTAAGTTAACCATGAGC +
Preference number: 5 (lower is better)
Translates to: LFLVAALRALLLLLHERAKVSGP*PKLTMS
Trigger: GCTCATGGTTAACTTAGGCAAAGGACCAGAGACCTT...GGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ATCACCTCTGAGGCCCCCGGAACCCGTCTGATTCCCGGCTCCGTGGGGTTTGCTCTTGGACAAATAGAATaGCCACATTCTTGTAACTTG +
Preference number: 5 (lower is better)
Translates to: ITSEAPGTRLIPGSVGFALGQIE*PHSCNL
Trigger: CAAGTTACAAGAATGTGGCAATTCTATTTGTCCAAG...AGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS GCA 90 bp GAAAGCCATCTCGAGAGGCCACGAGCTTTGGGAGGTTGCTGTACATaGCTTGGGCCAGACCAGCCATATAGAGATCACCTTTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: ESHLERPRALGGCCT*LGPDQPYRDHLSNP
Trigger: TGGATTTGAAAGGTGATCTCTATATGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTCGAGATGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS GCA 90 bp AGGTGCCCTGCCAAGCTCGAGTTAATTTCACTGCAGGAATGGAAGTaGAGAGTGCATATCCCTGAGAAAGCACAACCTCAGGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: RCPAKLELISLQEWK*RVHIPEKAQPQGAE
Trigger: TTCTGCCCCCTGAGGTTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCGAGCTTGGCAGGGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553631.1
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAEPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTCCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp GGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCATGTGCTTTCCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: GDFVRSKVLGFPLGRMCFPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...AAAGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: SKRSSGEGSFQACGSGGAVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSRRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCTCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAGCGACCGCTGGGACCTaGCCGCAGCCGTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVATAGT*PQPWLS
Trigger: GCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGTCGC...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAGGCTTGTGTGACCTTTaGTGGTTCCATCACGAGTTG +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKGLCDL*WFHHEL
Trigger: CAACTCGTGATGGAACCACAAAAGGTCACACAAGCC...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCAAGTGCTGCCCATAACTaGCCTCCCAGGACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LVSETLLGLKSLDSHLGASAAHN*PPRTPE
Trigger: CTCTGGAGTCCTGGGAGGCAAGTTATGGGCAGCACT...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTGTAGAGACGTTGGTCTaGAACTGGAAACTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPVETLV*NWKLRS
Trigger: TGACCTGAGTTTCCAGTTCAAGACCAACGTCTCTAC...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACAGCCCCGTAGAGACGTaGGTCTTGAACTGGAAACTC +
Preference number: 5 (lower is better)
Translates to: PTWAHVLCSHLRRLKWKDSPVET*VLNWKL
Trigger: GAGTTTCCAGTTCAAGACCAACGTCTCTACGGGGCT...GTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp CTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAAACTGCAATGAAGTCATaGCCATCACCACTATTGAAG +
Preference number: 5 (lower is better)
Translates to: LPWSDKQGNPASEVMDRETAMKS*PSPLLK
Trigger: CTTCAATAGTGGTGATGGCAATGACTTCATTGCAGT...TTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTTTGCCTTTGATCACATaGGGACCGTTTCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSLPLIT*GPFPRS
Trigger: TGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAA...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAACGAGTGATGACGACATaGTGCCACTGGTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKRVMTT*CHWLSF
Trigger: GAATGACAACCAGTGGCACAATGTCGTCATCACTCG...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TTCTGTTTCTTGTGGCCGCTCTTCGAGCTCTGCTGCTTCTCCTTCATGAGCGTGCGAGTGATGACGACATaGTGCCACTGGTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: FCFLWPLFELCCFSFMSVRVMTT*CHWLSF
Trigger: GAATGACAACCAGTGGCACAATGTCGTCATCACTCG...CACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTTTAGGTCTAAAGTCCTaGGATTCCCACTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPLGLKS*DSHLGA
Trigger: TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAA...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CATCATCATCACAACCATCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTTCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: HHHHNHRCLGPTSKVTPPSRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...AGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS GCA 90 bp TCTCGAGCTGCCAAGCTCGAGTTAATTTCACTGCAGGAATGGAAGTaGAGAGTGCATATCCCTGAGAAAGCACAACCTCAGGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: SRAAKLELISLQEWK*RVHIPEKAQPQGAE
Trigger: TTCTGCCCCCTGAGGTTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCGAGCTTGGCAGCTCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554719.5
CDS CCA 90 bp AATTTTCCCCTGTTCTATGTGAAGCTGGAGGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGACCAAGATGCCATCCTTCACAGTGGT +
Preference number: 5 (lower is better)
Translates to: NFPLFYVKLEEVTKS*STVDADQDAILHSG
Trigger: ACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555073.5
ENST00000555387.1
ENST00000556003.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS CCA 90 bp ATACAAGGGCAGGAACCCCCTAGTATGGTTCACGCTCATGTTCCCTaGAGGGCTGTTCCTGCAAACATAAAGCTGATAAGTTGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: IQGQEPPSMVHAHVP*RAVPANIKLISCRV
Trigger: GACACGGCAACTTATCAGCTTTATGTTTGCAGGAACAGCCCTCCAGGGAACATGAGCGTGAACCATACTAGGGGGTTCCTGCCCTTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555073.5
CDS CCA 90 bp TTCTCCTCTCGAGCTGCCAAGCTCGAGTTAATTTCACTGCAGGAATaGAAGTGCAGAGTGCATATCCCTGAGAAAGCACAACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: FSSRAAKLELISLQE*KCRVHIPEKAQPQG
Trigger: CCCCTGAGGTTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCGAGCTTGGCAGCTCGAGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554719.5
CDS-3UTR CAA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGGGGGTTCTCTCCTCTTaGATGGAGATGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLGVLSS*MEMSTV
Trigger: CACAGTTGACATCTCCATCAAAGAGGAGAGAACCCC...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TGCGGAAGTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: CGSGGATVRLQSAKCVLYSRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...ATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCACTTCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: GGRLESKVSPEPYPDITKWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TCGCTGCCTTGGTCCGACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: SLPWSDKQGNPASEVMDRSLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...CCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIASLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSRRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTCTTATCTGTTACCAAGGCGACGACCATCCCTGTaGTGCTGCTCGACTCCCGGA +
Preference number: 5 (lower is better)
Translates to: LCSHLRRLKWKDSYLLPRRRPSL*CCSTPG
Trigger: TCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCG...CCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGATCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAATCTGGCATGACATGGTaGGCTTGTGTGACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKSGMTW*ACVTFC
Trigger: ACAAAAGGTCACACAAGCCAACCATGTCATGCCAGA...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGTTCTCTCCAAGAAGATaGACTTATGCCTTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQFSPRR*TYAFFP
Trigger: GGGGAAAAAGGCATAAGTCAATCTTCTTGGAGAGAA...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTCCCACTACTATACATTaGCTAGAAACAGAACCATAT +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIAPTTIH*LETEPY
Trigger: ATATGGTTCTGTTTCTAGCAAATGTATAGTAGTGGG...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAAGAGGATCTCTCCCTTaGGCAATAGAAGTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKRGSLP*AIEVGK
Trigger: CTTTCCCACTTCTATTGCCAAAGGGAGAGATCCTCT...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAGCAAGTCAGCGGTACTaGGGCTTCCTCCTACATAGA +
Preference number: 5 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGASQRY*GFLLHR
Trigger: TCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTGC...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATAGCAGCAAGTACAGGTaGCCATCGAGGAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: LGFEITVIHFASWQFGHHSSKYR*PSRSST
Trigger: CGTGGAACTCCTCGATGGCAACCTGTACTTGCTGCT...ATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTATGGTCTCCCACCATaGTACCCTCAGCCACATCAT +
Preference number: 5 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFYGLPP*YPQPHH
Trigger: ATGATGTGGCTGAGGGTACAATGGTGGGAGACCATA...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGCGGTCACTGTTGCCTTaGATCACATTGGGACCGTTT +
Preference number: 5 (lower is better)
Translates to: YSFCQLAIWAPSQTRRKLRSLLP*ITLGPF
Trigger: AAACGGTCCCAATGTGATCAAAGGCAACAGTGACCG...CAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp AACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTATGCAGACCCCCTGGTaGGCACATGAATCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: NSRVSSVRMFTRNTPCPCMQTPW*AHESSW
Trigger: CCAGGAAGATTCATGTGCCAACCAGGGGGTCTGCAT...ACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGTGAAGCCCTCCCATaGTTGCATGCAGACCCCCTG +
Preference number: 5 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLGEALP*LHADPL
Trigger: CAGGGGGTCTGCATGCAACAATGGGAGGGCTTCACC...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ACCGCTGGGACCTTGCCGCAGCCGTGGCTGAGCTTTAGAGAGAGATGCATCGCTACAGGCCGATTATATTaGAAGGGGATTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: TAGTLPQPWLSFRERCIATGRLY*KGIFCF
Trigger: AAAACAGAAAATCCCCTTCAAATATAATCGGCCTGT...AGCGATGCATCTCTCTCTAAAGCTCAGCCACGGCTGCGGCAAGGTCCCAGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGATTAGGTCTAAAGTCCTaGGATTCCCACTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: TVIHFASWQFGHHPRRGGLGLKS*DSHLGA
Trigger: TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAA...TCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGATATCAGGCTGGGGTTaGAGATCACGGTTATTCATT +
Preference number: 5 (lower is better)
Translates to: FASWQFGHHPRRGGSCEAISGWG*RSRLFI
Trigger: AATGAATAACCGTGATCTCAAACCCCAGCCTGATAT...CGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS TCA 90 bp GGTACCATTCCCCATCATTGGCTTTCTTCTGAGTGGCTTTCACTTTaGTGGTGCCAGAGCCCATGTCAAGCAGCAAGTACAGGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: GTIPHHWLSSEWLSL*WCQSPCQAASTGCH
Trigger: ATGGCAACCTGTACTTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTCAGAAGAAAGCCAATGATGGGGAATGGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS TCA 90 bp CGAGTTAATTTCACTGCAGGAATGGAAGTGCAGAGTGCATATCCCTaGGAAAGCACAACCTCAGGGGGCAGAAACAACGAAGAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: RVNFTAGMEVQSAYP*ESTTSGGRNNEERD
Trigger: GTCCCTCTCTTCGTTGTTTCTGCCCCCTGAGGTTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553631.1
ENST00000554719.5
CDS CCA 90 bp CACATATTTTCTGACTATGTGAAGCTGGAGGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGACCAAGATGCCATCCTTCACAGTGGT +
Preference number: 5 (lower is better)
Translates to: HIFSDYVKLEEVTKS*STVDADQDAILHSG
Trigger: ACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGTCAGAAAATATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553803.5
CDS-3UTR CAA 90 bp GATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGCGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: DHGYSFCQLAIWAPSQTRRTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...CCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ACAACAGAGGATGATACAGGGAGGCAACAACACATACATCCACACCACATAACACCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: TTEDDTGRQQHIHPHHITPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...TGTTATGTGGTGTGGATGTATGTGTTGTTGCCTCCCTGTATCATCCTCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR CAA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTCCCAGAGAGTTGGCCTaGGAAGAGGCGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSPRELA*EEASFV
Trigger: GACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGG...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp AGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGGAGCCAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SKRSSGEGSFQACGSGGASRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...GGCTCCACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: CVLYDTAGHKTFCLPATAWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...AGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAATCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAESLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: RISSGDKDVVVVLLVSETSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFLFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVLFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CCCACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PTWAHVLCSHLRRLKWKDLFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...GTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGCTGCCCATAACTaGCCTCCCAGGACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSSAAHN*PPRTPE
Trigger: CTCTGGAGTCCTGGGAGGCAAGTTATGGGCAGCACT...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554738.5
CDS-3UTR CAA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTAGCCCCGTAGAGACGTaGGTCTTGAACTGGAAACTC +
Preference number: 5 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRSPVET*VLNWKL
Trigger: GAGTTTCCAGTTCAAGACCAACGTCTCTACGGGGCT...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp TTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCAGTAGGTTGCGTGTCACTTaGACATCATGCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: FAVGTLRNMGEVISGLFSRLRVT*TSCQAL
Trigger: CAACGCCTGGCATGATGTCAAAGTGACACGCAACCT...ACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGTGCCATCCACAGAGATaGTCACCTGCCGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLCHPQR*SPAGGC
Trigger: GCAACCTCCGGCAGGTGACAATCTCTGTGGATGGCA...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGAGAGGCCACGAGCTTaGGGAGGTTGCTGTACATGC +
Preference number: 5 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSERPRA*GGCCTC
Trigger: GCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTC...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAAGCCCTCCCATTGTaGCATGCAGACCCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICEALPL*HADPLV
Trigger: AACCAGGGGGTCTGCATGCAACAATGGGAGGGCTTC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGAAGCCCTCCCATTGTaGCATGCAGACCCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSEALPL*HADPLV
Trigger: AACCAGGGGGTCTGCATGCAACAATGGGAGGGCTTC...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAGGTGAAGCCCTCCCATaGTTGCATGCAGACCCCCTG +
Preference number: 5 (lower is better)
Translates to: FHSSSSSDICEISPSKDSGEALP*LHADPL
Trigger: CAGGGGGTCTGCATGCAACAATGGGAGGGCTTCACC...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAG +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICLPAGN*GTIPDE
Trigger: CTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TTGCCAGCTGGCAATTTGGGCACCATCCCAGACGAGGAGGAAGCTGTGAAGCGGCTTGGACAAATAGAATaGCCACATTCTTGTAACTTG +
Preference number: 5 (lower is better)
Translates to: LPAGNLGTIPDEEEAVKRLGQIE*PHSCNL
Trigger: CAAGTTACAAGAATGTGGCAATTCTATTTGTCCAAG...CCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPASTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ACAAGCAAGGTAACCCCGCCTCAGAGGTCATGGACAGGGAATCTTTGGTGGTCTATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: TSKVTPPQRSWTGNLWWSILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...AGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTGGTGGAGCCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: VVEPPSGSRALSVCFMIQSLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...CTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGGCTCCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CCACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: PPSGSRALSVCFMIQQGTSLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...TGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTACCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAACCGCGTCTCGTCCACTaGATAGGACCCCTCGTCCCT +
Preference number: 5 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEPRLVH*IGPLVP
Trigger: AGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGG...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGGGACCTATCCAAATTATGGTTTaGATCCTGCTTGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: FMIQQGTKPSVSQRPLGPIQIMV*ILLAPT
Trigger: AGTGGGAGCAAGCAGGATCAAAACCATAATTTGGAT...AGGTCCCAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTATATGCTCGAGTCCTTaGTACTCGACAAAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRICSSP*YSTKQP
Trigger: GGGCTGCTTTGTCGAGTACAAAGGACTCGAGCATAT...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTATTTGCTCTTCTACTaGGGCCATGTAACCACTTCA +
Preference number: 5 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLYLLFY*GHVTTS
Trigger: TGAAGTGGTTACATGGCCCAAGTAGAAGAGCAAATA...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGAGAAGGGAGGGGTTGTaGGAGGTGCGAAAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRRREGL*EVRKAG
Trigger: ACCTGCTTTTCGCACCTCCAACAACCCCTCCCTTCT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGCTGTCATTCACCTGCTaGTTGGACAGCACGGCAGTC +
Preference number: 5 (lower is better)
Translates to: ESWLYTPFHSSSSSDICELSFTC*LDSTAV
Trigger: GACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAG...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GGGGTAGCTAAAGGGTCTTCTACAAGAAGAGGGATAACTAATTCACCTCATCAACGTGAACAGGAGGACTaGACACCCGCAGCATTCTGC +
Preference number: 5 (lower is better)
Translates to: GVAKGSSTRRGITNSPHQREQED*TPAAFC
Trigger: GCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACG...TTGATGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAATTGCCTTTGATCACATaGGGACCGTTTCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAELPLIT*GPFPRS
Trigger: TGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAA...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCGGTCACTGTTGCCTTaGATCACATTGGGACCGTTT +
Preference number: 5 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLRSLLP*ITLGPF
Trigger: AAACGGTCCCAATGTGATCAAAGGCAACAGTGACCG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCGTTGCTGTACATGCCTaGGGCCAGACCAGCCATATA +
Preference number: 5 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRVAVHA*GQTSHI
Trigger: TATATGGCTGGTCTGGCCCAAGGCATGTACAGCAAC...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGATGCAGACCCCCTGGTaGGCACATGAATCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRMQTPW*AHESSW
Trigger: CCAGGAAGATTCATGTGCCAACCAGGGGGTCTGCAT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp GGGGGCAGGTTAGAGTCAAAGGTTTCCCCTGAGCCATACCCAGATATCACCAAGAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTAT +
Preference number: 5 (lower is better)
Translates to: GGRLESKVSPEPYPDITKSHLRR*KWKDSY
Trigger: ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCT...CTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTAGGTCTAAAGTCCTaGGATTCCCACTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: RISSGDKDVVVVLLVSETLGLKS*DSHLGA
Trigger: TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAA...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAATTAGGTCTAAAGTCCTaGGATTCCCACTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAELGLKS*DSHLGA
Trigger: TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAA...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGTCAACTGTGCCAATGTaGAAGACAACTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLSTVPM*KTTPIF
Trigger: GAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGA...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAATCAACTGTGCCAATGTaGAAGACAACTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKSTVPM*KTTPIF
Trigger: GAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGA...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCGGGGTTCTCTCCTCTTaGATGGAGATGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRGVLSS*MEMSTV
Trigger: CACAGTTGACATCTCCATCAAAGAGGAGAGAACCCC...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLRTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLSTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAATCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAESTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTGGTTCCATCACGAGTaGAACTCCCCTACTGTCTGG +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICWFHHE*NSPTVW
Trigger: CCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGCCTCCAATGTACTTTTaGCAGTCTGTCATCAATCCA +
Preference number: 5 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVPPMYF*QSVINP
Trigger: TGGATTGATGACAGACTGCAAAAAGTACATTGGAGG...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCCAGCGACCGCTGATTAGCTGTGTGACCTaGGAGAAGTCATTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: VCFMIQQGTKPSVSQRPLISCVT*EKSFKF
Trigger: GAACTTAAATGACTTCTCCAAGGTCACACAGCTAAT...CAGCGGTCGCTGGGAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATTCATTCACCTGCTTGTaGGACAGCACGGCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHSFTCL*DSTAVS
Trigger: CGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGA...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCCAAAGAAGTCTACTTTaGTATTCTTCTGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFQRSLL*YSSGSE
Trigger: CTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTG...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS-3UTR CAA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGCAGCAAGTACAGGTaGCCATCGAGGAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHSSKYR*PSRSST
Trigger: CGTGGAACTCCTCGATGGCAACCTGTACTTGCTGCT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTGCCACTCGTTGTCATaGAGCTTCTGCCCTGCATAC +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRCHSLS*SFCPAY
Trigger: GTATGCAGGGCAGAAGCTCAATGACAACGAGTGGCA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTGCCACTCGTTGTCATaGAGCTTCTGCCCTGCATAC +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICCHSLS*SFCPAY
Trigger: GTATGCAGGGCAGAAGCTCAATGACAACGAGTGGCA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCACGAGTGATGACGACATaGTGCCACTGGTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPRVMTT*CHWLSF
Trigger: GAATGACAACCAGTGGCACAATGTCGTCATCACTCG...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCCTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFLVSET*LGLKSL
Trigger: CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCATGTGCTTTTCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GDFVRSKVLGFPLGRMCFSRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...AAAGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGGGGTTCTCTCCTCTTaGATGGAGATGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSGVLSS*MEMSTV
Trigger: CACAGTTGACATCTCCATCAAAGAGGAGAGAACCCC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATATAGAGCCCAGAGAGTaGGCCTTGGAAGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHIEPRE*ALEEAS
Trigger: GGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVSRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: RLQSAKCVLYDTAGHKTFSRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...GAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFSRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: FIGVDRNNCENSRVSSVRLFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...GCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGGTGTGGACAGGAACAATATaGTTACGTAAAGCCAATAGC +
Preference number: 5 (lower is better)
Translates to: LLVKGPPEKEVSRPAEVVWTGTI*LRKANS
Trigger: GCTATTGGCTTTACGTAACAATATTGTTCCTGTCCA...CACCACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATGGTTCCATCACGAGTaGAACTCCCCTACTGTCTGG +
Preference number: 5 (lower is better)
Translates to: FHSSSSSDICEISPSKDSWFHHE*NSPTVW
Trigger: CCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCA...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTCTGGCATGACATGGTaGGCTTGTGTGACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMSGMTW*ACVTFC
Trigger: ACAAAAGGTCACACAAGCCAACCATGTCATGCCAGA...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp ACCGTCCGGCTCCAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAGGACACACTTCATTTTaGTGTGAATATTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: TVRLQSAKCVLYDTAGHKGHTSF*CEYLSC
Trigger: GCAAGACAAATATTCACACAAAAATGAAGTGTGTCC...TTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTGGAGCCGGACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp TACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAGTGATCCAAATTATGGTTTaGATCCTGCTTGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: YLLVKGPPEKEVSRPAEVIQIMV*ILLAPT
Trigger: AGTGGGAGCAAGCAGGATCAAAACCATAATTTGGAT...CACTTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGTTCTCTCCAAGAAGATaGACTTATGCCTTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPAFSPRR*TYAFFP
Trigger: GGGGAAAAAGGCATAAGTCAATCTTCTTGGAGAGAA...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAAGATCTGAGCATGCATaGCTTTTAGCTGTTGTTGTC +
Preference number: 5 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGRSEHA*LLAVVV
Trigger: GACAACAACAGCTAAAAGCAATGCATGCTCAGATCT...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTGGATCCGGAGGCCTaGACTCAAGGAGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEVDPEA*TQGGEG
Trigger: ACCTTCTCCTCCTTGAGTCAAGGCCTCCGGATCCAC...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATTGCCATCCACAGAGATaGTCACCTGCCGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHCHPQR*SPAGGC
Trigger: GCAACCTCCGGCAGGTGACAATCTCTGTGGATGGCA...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTATGGTCTCCCACCATaGTACCCTCAGCCACATCAT +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICYGLPP*YPQPHH
Trigger: ATGATGTGGCTGAGGGTACAATGGTGGGAGACCATA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTTGCCTTTGATCACATaGGGACCGTTTCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICLPLIT*GPFPRS
Trigger: TGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGACGAGCTTTGGGAGGTaGCTGTACATGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSTSFGR*LYMPWA
Trigger: GGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGT...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATTTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAG +
Preference number: 5 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHLPAGN*GTIPDE
Trigger: CTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGTCAACTGTGCCAATGTaGAAGACAACTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: VFYLLVKGPPEKEVSRPASTVPM*KTTPIF
Trigger: GAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGA...CGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATGGGGTTCTCTCCTCTTaGATGGAGATGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHGVLSS*MEMSTV
Trigger: CACAGTTGACATCTCCATCAAAGAGGAGAGAACCCC...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSSTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLSTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ACAACAGAGGATGATACAGGGAGGCAACAACACATACATCCACACCACATAACATGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: TTEDDTGRQQHIHPHHITWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...TGTTATGTGGTGTGGATGTATGTGTTGTTGCCTCCCTGTATCATCCTCTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR CAA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACTTCATGAGCGTGCCGTaGCTCTGGGCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RKLCKNALGQIELPHSCNFMSVP*LWAELL
Trigger: CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAA...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRLFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGTCTGGCATGACATGGTaGGCTTGTGTGACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ESWLYTPFHSSSSSDICESGMTW*ACVTFC
Trigger: ACAAAAGGTCACACAAGCCAACCATGTCATGCCAGA...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp CCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTGGAATTAGCTGTGTGACCTaGGAGAAGTCATTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: PAVLTSVRSHRPKIHRRGISCVT*EKSFKF
Trigger: GAACTTAAATGACTTCTCCAAGGTCACACAGCTAAT...TCCACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGAGCTGTCGAATGTTCTaGCTGCGCCCATCAATGAAT +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRSCRMF*LRPSMN
Trigger: ATTCATTGATGGGCGCAGCAAGAACATTCGACAGCT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGGGGGCGGTCACTGTaGCCTTTGATCACATTGGGA +
Preference number: 5 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSRGRSL*PLITLG
Trigger: TCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCT...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAACATTGTGCCACTGGTaGTCATTCAGGGGGCGGTCA +
Preference number: 5 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLTLCHW*SFRGRS
Trigger: TGACCGCCCCCTGAATGACAACCAGTGGCACAATGT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp GGGTTTGCTGTGGGCACATTACGGAACATGGGGGAAGTAATTAGTGGGCTCTTCACAGGCCGATTATATTaGAAGGGGATTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: GFAVGTLRNMGEVISGLFTGRLY*KGIFCF
Trigger: AAAACAGAAAATCCCCTTCAAATATAATCGGCCTGT...GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGCGTAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTAT +
Preference number: 5 (lower is better)
Translates to: VPAVLTSVRSHRPKIHRRSHLRR*KWKDSY
Trigger: ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCT...ACGCCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAACTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAELVSET*LGLKSL
Trigger: CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCATGTGCTTTCTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GDFVRSKVLGFPLGRMCFLVSET*LGLKSL
Trigger: CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG...AAAGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTATTGCCAGCTGGCAATTaGGGCACCATCCCAGACGAG +
Preference number: 5 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVLPAGN*GTIPDE
Trigger: CTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAA...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGGATTCCCACTTGGGCGCAATATCAGGCTGGGGTTaGAGATCACGGTTATTCATT +
Preference number: 5 (lower is better)
Translates to: LVSETLLGLKSLDSHLGAISGWG*RSRLFI
Trigger: AATGAATAACCGTGATCTCAAACCCCAGCCTGATAT...TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS TCA 90 bp AGACATTTCTGGTGGCATGGAGGTCGTCTGTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAGCCGAACACTTCCATTGATTTTAAT +
Preference number: 5 (lower is better)
Translates to: RHFWWHGGRLCCSQN*WDFSNQPNTSIDFN
Trigger: ATTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CTTTGTAGCCACCTTCGAAGATTGAAGTGGAAAGACTCTTATCTGTTACCAAGGTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LCSHLRRLKWKDSYLLPRSTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...CCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTTCCACCAATGGCTATTaGCGCCTGAGTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSSTNGY*RLSVED
Trigger: ATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGA...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: ISSGDKDVVVVLLVSETLPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...CAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ATATCAGGCTGGGGTTTGAGATCACGGTTATTCATTTTGCCAGCTGGCAATTTGGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: ISGWGLRSRLFILPAGNLVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTGGAGGTCGTCTGTGTaGTTCCCAAAATTGATGGGA +
Preference number: 5 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIWRSSV*FPKLMG
Trigger: TCCCATCAATTTTGGGAACAACACAGACGACCTCCA...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGAGGCTACCATTTAGATaGCACTTTTTGCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRRLPFR*HFLPHV
Trigger: GACATGGGGCAAAAAGTGCAATCTAAATGGTAGCCT...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp CAGAGCGCTAAGTGTGTGCTTTATGATACAGCAGGGCACAAAACCTTCTGTCTCCTTGGGTATCTGACCTaGTCCTTTAATATATCCAGA +
Preference number: 5 (lower is better)
Translates to: QSAKCVLYDTAGHKTFCLLGYLT*SFNISR
Trigger: TCTGGATATATTAAAGGACAAGGTCAGATACCCAAG...GAGACAGAAGGTTTTGTGCCCTGCTGTATCATAAAGCACACACTTAGCGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAAGGTTGCGTGTCACTTaGACATCATGCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVRLRVT*TSCQAL
Trigger: CAACGCCTGGCATGATGTCAAAGTGACACGCAACCT...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAGTCACCTGCCGGAGGTaGCGTGTCACTTTGACATCA +
Preference number: 5 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVVTCRR*RVTLTS
Trigger: TGATGTCAAAGTGACACGCAACCTCCGGCAGGTGAC...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGCAAAGAAGTCTACTTTaGTATTCTTCTGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMQRSLL*YSSGSE
Trigger: CTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTG...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
CDS-3UTR CAA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATCGTGAACAGGAGGACTaGACACCCGCAGCATTCTGC +
Preference number: 5 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHREQED*TPAAFC
Trigger: GCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACG...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTTCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVSRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGGGGGTTCTCTCCTCTTaGATGGAGATGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSGVLSS*MEMSTV
Trigger: CACAGTTGACATCTCCATCAAAGAGGAGAGAACCCC...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: SWLYTPFHSSSSSDICEIVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGCCTGCGGAAAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: FYLLVKGPPEKEVSRPAESLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...TTCCGCAGGCCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAAGGCTACCATTTAGATaGCACTTTTTGCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: FHSSSSSDICEISPSKDSRLPFR*HFLPHV
Trigger: GACATGGGGCAAAAAGTGCAATCTAAATGGTAGCCT...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATGAGAATCGTTTGAGGTaGAGAGGCAGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDENRLR*RGRGCS
Trigger: ACTGCAACCTCTGCCTCTCAACCTCAAACGATTCTC...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CATGAAGTCTTCTACCTTTTAGTAAAAGGTCCTCCGGAGAAGGAAGTTTCCAGGGTCTCTTGGAATTATTaGCTCTTCTACTTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: HEVFYLLVKGPPEKEVSRVSWNY*LFYLGH
Trigger: ATGGCCCAAGTAGAAGAGCAAATAATTCCAAGAGAC...CCTGGAAACTTCCTTCTCCGGAGGACCTTTTACTAAAAGGTAGAAGACTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCGTGGCTTGGTGTCTCTaGGAATTATTTGCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSVAWCL*ELFALL
Trigger: TAGAAGAGCAAATAATTCCAAGAGACACCAAGCCAC...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTAGATCTGAGCATGCATaGCTTTTAGCTGTTGTTGTC +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICRSEHA*LLAVVV
Trigger: GACAACAACAGCTAAAAGCAATGCATGCTCAGATCT...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTCAAAGAAGTCTACTTTaGTATTCTTCTGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSQRSLL*YSSGSE
Trigger: CTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTG...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp CGGATCAGCTCAGGGGATAAAGATGTGGTAGTAGTCCTACTAGTTTCGGAGACTACAGGCCGATTATATTaGAAGGGGATTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RISSGDKDVVVVLLVSETTGRLY*KGIFCF
Trigger: AAAACAGAAAATCCCCTTCAAATATAATCGGCCTGT...AGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGATCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTATTAGGTCTAAAGTCCTaGGATTCCCACTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLLGLKS*DSHLGA
Trigger: TGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAA...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTATATCAGGCTGGGGTTaGAGATCACGGTTATTCATT +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICISGWG*RSRLFI
Trigger: AATGAATAACCGTGATCTCAAACCCCAGCCTGATAT...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp GAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATATCAGGCTGGGGTTaGAGATCACGGTTATTCATT +
Preference number: 5 (lower is better)
Translates to: ESWLYTPFHSSSSSDICEISGWG*RSRLFI
Trigger: AATGAATAACCGTGATCTCAAACCCCAGCCTGATAT...CTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGATATCAGGCTGGGGTTaGAGATCACGGTTATTCATT +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRISGWG*RSRLFI
Trigger: AATGAATAACCGTGATCTCAAACCCCAGCCTGATAT...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ACAACAGAGGATGATACAGGGAGGCAACAACACATACATCCACACCACATAACATCAACTGTGCCAATGTaGAAGACAACTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: TTEDDTGRQQHIHPHHITSTVPM*KTTPIF
Trigger: GAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGA...TGTTATGTGGTGTGGATGTATGTGTTGTTGCCTCCCTGTATCATCCTCTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS-3UTR CAA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAGGGGTTCTCTCCTCTTaGATGGAGATGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVGVLSS*MEMSTV
Trigger: CACAGTTGACATCTCCATCAAAGAGGAGAGAACCCC...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAACGTACCACATGGTATTaGCCGTCATTTACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: SFTNITDSLGVMEQVSHERTTWY*PSFTGV
Trigger: AACCCCTGTAAATGACGGCAAATACCATGTGGTACG...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: FHSSSSSDICEISPSKDSILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp ATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: IGVDRNNCENSRVSSVRMSLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...CATGCGAACACTGCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATTCCCTGTTCCTGTACTaGTACATGGCGTACAGGAGG +
Preference number: 5 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHSLFLY*YMAYRR
Trigger: CCTCCTGTACGCCATGTACAAGTACAGGAACAGGGA...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp TCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATTTGTTTTTCTGTTTCTaGTGGCCGCTCTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: SSFTNITDSLGVMEQVSHLFFCF*WPLFEL
Trigger: GAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAA...ATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp ATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCACCCCTACTGTCTGGTTaGATAACAGACTTTAATATT +
Preference number: 5 (lower is better)
Translates to: IPHFIVPAVLTSVRSHRPPLLSG*ITDFNI
Trigger: AATATTAAAGTCTGTTATCAAACCAGACAGTAGGGG...TGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCATGGTTCCATCACGAGTaGAACTCCCCTACTGTCTGG +
Preference number: 5 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAWFHHE*NSPTVW
Trigger: CCAGACAGTAGGGGAGTTCAACTCGTGATGGAACCA...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATATCAGGAAACTCGGTaGCTCCATAAGAGTAGATCA +
Preference number: 5 (lower is better)
Translates to: FHSSSSSDICEISPSKDSYQETR*LHKSRS
Trigger: TGATCTACTCTTATGGAGCAACCGAGTTTCCTGATA...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CACCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGAAAGAGCTCTAAATTaGGAACCACAAGACTGGATT +
Preference number: 5 (lower is better)
Translates to: HQSRGYIPHFIVPAVLTSERALN*EPQDWI
Trigger: AATCCAGTCTTGTGGTTCCAAATTTAGAGCTCTTTC...AGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAGCAAGTCAGCGGTACTaGGGCTTCCTCCTACATAGA +
Preference number: 5 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAASQRY*GFLLHR
Trigger: TCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTGC...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp TTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCAACTGCAATGAAGTCATaGCCATCACCACTATTGAAG +
Preference number: 5 (lower is better)
Translates to: FHSSSSSDICEISPSKDSTAMKS*PSPLLK
Trigger: CTTCAATAGTGGTGATGGCAATGACTTCATTGCAGT...TGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000554719.5
CDS-3UTR CAA 90 bp AACTGTGAAAACTCGCGTGTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCACAGGCCGATTATATTaGAAGGGGATTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: NCENSRVSSVRMFTRNTPTGRLY*KGIFCF
Trigger: AAAACAGAAAATCCCCTTCAAATATAATCGGCCTGT...GGGAGTATTACGTGTAAACATGCGAACACTGCTCACACGCGAGTTTTCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp GATGTGGTAGTAGTCCTACTAGTTTCGGAGACTTTGTTAGGTCTAAAGTCCTTGAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTAT +
Preference number: 5 (lower is better)
Translates to: DVVVVLLVSETLLGLKSLSHLRR*KWKDSY
Trigger: ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCT...CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATCTAGTTTCGGAGACTTaGTTAGGTCTAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHLVSET*LGLKSL
Trigger: CAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAG...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATCACGGTTATTCATTTaGCCAGCTGGCAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: SFTNITDSLGVMEQVSHESRLFI*PAGNLG
Trigger: GCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTACCATTGATTTTAATATaGGGGTTGTTCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVPLILI*GLFSAA
Trigger: GGCGGCTGAGAACAACCCCAATATTAAAATCAATGG...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp TCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SWLYTPFHSSSSSDICEISRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...GATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSSRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: FIVPAVLTSVRSHRPKIHSRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...ATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp GTGAGCAGTGTTCGCATGTTTACACGTAATACTCCCTGTCCTTGTTTTTCTGTTAGCCGAACACTTCCATaGATTTTAATATTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: VSSVRMFTRNTPCPCFSVSRTLP*ILILGL
Trigger: CAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT...AACAGAAAAACAAGGACAGGGAGTATTACGTGTAAACATGCGAACACTGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGGACACACTTCATTTTaGTGTGAATATTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICGHTSF*CEYLSC
Trigger: GCAAGACAAATATTCACACAAAAATGAAGTGTGTCC...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp GTCCAAAGATTCATAGGCGTGGATAGAAATAACTGTGAAAACTCGCGTGTGAGCTTTAGATTGCACTTTTaGCCCCATGTCGTTAAGATA +
Preference number: 5 (lower is better)
Translates to: VQRFIGVDRNNCENSRVSFRLHF*PHVVKI
Trigger: TATCTTAACGACATGGGGCAAAAAGTGCAATCTAAA...GCTCACACGCGAGTTTTCACAGTTATTTCTATCCACGCCTATGAATCTTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp ATAGTTCCAGCAGTTCTGACATCTGTGAGATCTCACCGTCCAAAGATTCATAGGTTTAGATTGCACTTTTaGCCCCATGTCGTTAAGATA +
Preference number: 5 (lower is better)
Translates to: IVPAVLTSVRSHRPKIHRFRLHF*PHVVKI
Trigger: TATCTTAACGACATGGGGCAAAAAGTGCAATCTAAA...CCTATGAATCTTTGGACGGTGAGATCTCACAGATGTCAGAACTGCTGGAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCATCGACAAAGCAGCCCTaGACCTTGAACTTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSASTKQP*TLNFSS
Trigger: GCTTGAGAAGTTCAAGGTCAAGGGCTGCTTTGTCGA...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CCAGAGTCGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTTCAAAAAGGTTAGAATaGCTTCCCAATTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: PESWLYTPFHSSSSSDICSKRLE*LPNSDS
Trigger: GGAATCAGAATTGGGAAGCAATTCTAACCTTTTTGA...ACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACGACTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTC +
Preference number: 5 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEILILG*FSAAMF
Trigger: GAACATGGCGGCTGAGAACAACCCCAATATTAAAAT...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTAGTCTTCATCATCACTaGAACATTCAGCAGATGAAA +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSSLHHH*NIQQMK
Trigger: TTTCATCTGCTGAATGTTCAAGTGATGATGAAGACT...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS-3UTR CAA 90 bp CGTGGTTATATACCCCATTTCATAGTTCCAGCAGTTCTGACATCTGTGAGATCTTTTAGATTGCACTTTTaGCCCCATGTCGTTAAGATA +
Preference number: 5 (lower is better)
Translates to: RGYIPHFIVPAVLTSVRSFRLHF*PHVVKI
Trigger: TATCTTAACGACATGGGGCAAAAAGTGCAATCTAAA...AGATCTCACAGATGTCAGAACTGCTGGAACTATGAAATGGGGTATATAACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp TTACAGTCAAGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGGCTACCATTTAGATaGCACTTTTTGCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: LQSSFTNITDSLGVMEQVRLPFR*HFLPHV
Trigger: GACATGGGGCAAAAAGTGCAATCTAAATGGTAGCCT...TACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCTTGACTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AGCTTCACAAACATTACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAATATCAGGAAACTCGGTaGCTCCATAAGAGTAGATCA +
Preference number: 5 (lower is better)
Translates to: SFTNITDSLGVMEQVSHEYQETR*LHKSRS
Trigger: TGATCTACTCTTATGGAGCAACCGAGTTTCCTGATA...TTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGTAATGTTTGTGAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAATATCAGGCTGGGGTTaGAGATCACGGTTATTCATT +
Preference number: 5 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVISGWG*RSRLFI
Trigger: AATGAATAACCGTGATCTCAAACCCCAGCCTGATAT...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000555387.1
ENST00000557594.5
ENST00000679122.1
CDS-3UTR CAA 90 bp AGAAAGTTGTGTAAGAATGCTCTTGGACAAATAGAATTGCCACATTCTTGTAACGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: RKLCKNALGQIELPHSCNVLFPK*MGLLQP
Trigger: TGGTTGGAGAAGTCCCATCAATTTTGGGAACAACAC...GTTACAAGAATGTGGCAATTCTATTTGTCCAAGAGCATTCTTACACAACTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554738.5
ENST00000555387.1
ENST00000676811.1
CDS-3UTR CAA 90 bp ACAGACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAAAAGAACTATGTGTTTaGTACTCTGGCATGACATGG +
Preference number: 5 (lower is better)
Translates to: TDSLGVMEQVSHEVFYLLKELCV*YSGMTW
Trigger: CCATGTCATGCCAGAGTACAAAACACATAGTTCTTT...TAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAAAGAACTATGTGTTTaGTACTCTGGCATGACATGG +
Preference number: 5 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSKELCV*YSGMTW
Trigger: CCATGTCATGCCAGAGTACAAAACACATAGTTCTTT...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAGAAAGAGCTCTAAATTaGGAACCACAAGACTGGATT +
Preference number: 5 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVERALN*EPQDWI
Trigger: AATCCAGTCTTGTGGTTCCAAATTTAGAGCTCTTTC...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATCCAATTCTGATTCCCTaGATACTTTGGAACTTCAAC +
Preference number: 5 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDPILIP*ILWNFN
Trigger: GTTGAAGTTCCAAAGTATCAAGGGAATCAGAATTGG...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGCCCCTACTGTCTGGTTaGATAACAGACTTTAATATT +
Preference number: 5 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSPLLSG*ITDFNI
Trigger: AATATTAAAGTCTGTTATCAAACCAGACAGTAGGGG...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AATCAATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGCCCACTACTATACATTaGCTAGAAACAGAACCATAT +
Preference number: 5 (lower is better)
Translates to: NQFTRPQDSKNSNLLQTSPTTIH*LETEPY
Trigger: ATATGGTTCTGTTTCTAGCAAATGTATAGTAGTGGG...CGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTGATTCCCTTGATACTTaGGAACTTCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFDSLDT*ELQPLQ
Trigger: TTGCAAAGGTTGAAGTTCCAAAGTATCAAGGGAATC...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AATTCACAAGACCTCAAGACTCCAAGAACAGCAATCTTTTACAGACATCGAGATTTTAATCAACTGAGTTaGCTGGGTATGTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: NSQDLKTPRTAIFYRHRDFNQLS*LGMFPL
Trigger: AAGAGGAAACATACCCAGCAAACTCAGTTGATTAAA...ATCTCGATGTCTGTAAAAGATTGCTGTTCTTGGAGTCTTGAGGTCTTGTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335750.7
CDS-3UTR CAA 90 bp GACTCACTTGGAGTTATGGAACAAGTAAGCCATGAAGTCTTCTACCTTTTAGTAACAGGCCGATTATATTaGAAGGGGATTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: DSLGVMEQVSHEVFYLLVTGRLY*KGIFCF
Trigger: AAAACAGAAAATCCCCTTCAAATATAATCGGCCTGT...TACTAAAAGGTAGAAGACTTCATGGCTTACTTGTTCCATAACTCCAAGTGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000555387.1
ENST00000679122.1
CDS-3UTR CAA 90 bp TCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCAAAGCATTCAACTGTGCCAATGTaGAAGACAACTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: SNQFIIRHMNFAMCSAKHSTVPM*KTTPIF
Trigger: GAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGA...ATGCTTTGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp CATCTGTACAAAAGAAATTGTATATCTGACCCTCCAGAGGACACACTTCATTTTGGACACACTTCATTTTaGTGTGAATATTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: HLYKRNCISDPPEDTLHFGHTSF*CEYLSC
Trigger: GCAAGACAAATATTCACACAAAAATGAAGTGTGTCC...AAAATGAAGTGTGTCCTCTGGAGGGTCAGATATACAATTTCTTTTGTACAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
CDS-3UTR CAA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCACCAATTCTGATTCCCTaGATACTTTGGAACTTCAAC +
Preference number: 5 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSAPILIP*ILWNFN
Trigger: GTTGAAGTTCCAAAGTATCAAGGGAATCAGAATTGG...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS-3UTR CAA 90 bp AGCTTTTCGAATCAATTTATCATCCGTCACATGAATTTTGCTATGTGTTCAGCATCAAAAAGGTTAGAATaGCTTCCCAATTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: SFSNQFIIRHMNFAMCSASKRLE*LPNSDS
Trigger: GGAATCAGAATTGGGAAGCAATTCTAACCTTTTTGA...TGCTGAACACATAGCAAAATTCATGTGACGGATGATAAATTGATTCGAAAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000335750.7
CDS CCA 72 bp GTCCAGGCCGGCCGGCGAGGAGGGCTCCGTCTCGCGTaGATTCTCAGGTGCATGGTCAACGCACGGGACCAC +
Preference number: 6 (lower is better)
Translates to: VQAGRRGGLRLA*ILRCMVNARDH
Trigger: GTGGTCCCGTGCGTTGACCATGCACCTGAGAATCCACGCGAGACGGAGCCCTCCTCGCCGGCCGGCCTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000555387.1
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS CCA 72 bp CAGGGACGCTCACCACAGGGTCCCTCGGCATCCATCTaGACACCCCGGCTCCCCAGAAGCCGAGGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: QGRSPQGPSASI*TPRLPRSRGSE
Trigger: CTCGGAGCCTCGGCTTCTGGGGAGCCGGGGTGTCCAGATGGATGCCGAGGGACCCTGTGGTGAGCGTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000556088.1
ENST00000634499.2
CDS CCA 72 bp GTGCGGAGCAGCCACCCAAACCAACGTGGCACGGGGTaGAGGGAGGTGGGTGGGCGAAATCAGCGAGAGCGC +
Preference number: 6 (lower is better)
Translates to: VRSSHPNQRGTG*REVGGRNQRER
Trigger: GCGCTCTCGCTGATTTCGCCCACCCACCTCCCTCCACCCCGTGCCACGTTGGTTTGGGTGGCTGCTCCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS TCA 72 bp ACTCCCGGATCACCTCTGAGGCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGTTTGCTGACCTACCTG +
Preference number: 6 (lower is better)
Translates to: TPGSPLRPPEPV*FPAPWGLLTYL
Trigger: CAGGTAGGTCAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281127.11
CDS TCA 72 bp ACTCCCGGATCACCTCTGAGGCCCCCGGAACCCGTCTaGTTCCCGGCTCCGTGGGGTTTGCTGTACTCGGCT +
Preference number: 6 (lower is better)
Translates to: TPGSPLRPPEPV*FPAPWGLLYSA
Trigger: AGCCGAGTACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000428277.6
ENST00000554719.5
ENST00000634499.2
CDS CCA 72 bp CCCAAACCAACGTGGCACGGGGTGGAGGGAGGTGGGTaGGCGAAATCAGCGAGAGCGCAAGAGGAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: PKPTWHGVEGGG*AKSARAQEEVP
Trigger: AGGCACCTCCTCTTGCGCTCTCGCTGATTTCGCCCACCCACCTCCCTCCACCCCGTGCCACGTTGGTTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281127.11
ENST00000557594.5
CDS TCA 72 bp CGATGCGGACCAAGATGCCATCCTTCACAGTGGTGCTaGAGCCCACGGCAAGGCGGTCAGACCGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: RCGPRCHPSQWC*SPRQGGQTACW
Trigger: CCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000553803.5
ENST00000554719.5
ENST00000554738.5
ENST00000555073.5
ENST00000555387.1
ENST00000556003.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS GCA 72 bp CGGCGAGGAGGGCTCCGTCTCGCGTGGATTCTCAGGTaGATGGTCAACGCACGGGACCACTACAGATGGGCA +
Preference number: 6 (lower is better)
Translates to: RRGGLRLAWILR*MVNARDHYRWA
Trigger: TGCCCATCTGTAGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCCACGCGAGACGGAGCCCTCCTCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS TCA 72 bp ACGGCAGTCTCGGCACAGTCCATGCTGAAGCGGAGCTaGACGCGGCCATCCACCAGGGAGAGGCATAGGAAG +
Preference number: 6 (lower is better)
Translates to: TAVSAQSMLKRS*TRPSTRERHRK
Trigger: CTTCCTATGCCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCATGGACTGTGCCGAGACTGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS TCA 72 bp GGCGCCTGCGAAGTGCGCGGACCAGGGAGGCACAGGTaGAGTGAAGCGAGGAGTTGGGGAGCCAAATTCACA +
Preference number: 6 (lower is better)
Translates to: GACEVRGPGRHR*SEARSWGAKFT
Trigger: TGTGAATTTGGCTCCCCAACTCCTCGCTTCACTTCACCTGTGCCTCCCTGGTCCGCGCACTTCGCAGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557594.5
CDS CCA 72 bp AGGGGGCTGCAGGTGGAAGAGTTCTTCGGGTGTTCCTaGGAGTCTCCGCGGAAGGGCGCGAGGCTTTTAACC +
Preference number: 6 (lower is better)
Translates to: RGLQVEEFFGCS*ESPRKGARLLT
Trigger: GGTTAAAAGCCTCGCGCCCTTCCGCGGAGACTCCCAGGAACACCCGAAGAACTCTTCCACCTGCAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281127.11
ENST00000557594.5
ENST00000679122.1
CDS GCA 72 bp ACCGTGCGCAGGCGGTCACGGCTCACCATGAGGAAGTaGCAGCTGCTGTCATTCACCTGCTTGTTGGACAGC +
Preference number: 6 (lower is better)
Translates to: TVRRRSRLTMRK*QLLSFTCLLDS
Trigger: GCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGACCGCCTGCGCACGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CCA 72 bp GAAAACCGAGTGGAGTGTGGAGCTCATTGTCGCTGCTaGGACAGAGCCCGGAGGAGCAGACAGGCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: ENRVECGAHCRC*DRARRSRQARE
Trigger: TTCCCTGGCCTGTCTGCTCCTCCGGGCTCTGTCCCAGCAGCGACAATGAGCTCCACACTCCACTCGGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CAA 90 bp CGGCTCACCATGAGGAAGTGCCAGCTGCTGTCATTCACCTGCTTGTaGGACAGCACGGCAGTCTCGGCACAGTCCATGCTGAAGCGGAGC +
Preference number: 6 (lower is better)
Translates to: RLTMRKCQLLSFTCL*DSTAVSAQSMLKRS
Trigger: GCTCCGCTTCAGCATGGACTGTGCCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CCA 72 bp GAGGAGGGCTCCGTCTCGCGTGGATTCTCAGGTGCATaGTCAACGCACGGGACCACTACAGATGGGCAGTTT +
Preference number: 6 (lower is better)
Translates to: EEGSVSRGFSGA*STHGTTTDGQF
Trigger: AAACTGCCCATCTGTAGTGGTCCCGTGCGTTGACCATGCACCTGAGAATCCACGCGAGACGGAGCCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS CAA 90 bp TCACGGCTCACCATGAGGAAGTGCCAGCTGCTGTCATTCACCTGCTaGTTGGACAGCACGGCAGTCTCGGCACAGTCCATGCTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: SRLTMRKCQLLSFTC*LDSTAVSAQSMLKR
Trigger: CCGCTTCAGCATGGACTGTGCCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS GCA 72 bp CTCACCATGAGGAAGTGCCAGCTGCTGTCATTCACCTaGTTGTTGGACAGCACGGCAGTCTCGGCACAGTCC +
Preference number: 6 (lower is better)
Translates to: LTMRKCQLLSFT*LLDSTAVSAQS
Trigger: GGACTGTGCCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CCA 72 bp CCTGGCAGGTGGTACTGGGTCCTTGCAGGTCAGCTTTaGTCAACGCAACTTCACAGCCACGCTCGATCTGTC +
Preference number: 6 (lower is better)
Translates to: PGRWYWVLAGQL*STQLHSHARSV
Trigger: GACAGATCGAGCGTGGCTGTGAAGTTGCGTTGACCAAAGCTGACCTGCAAGGACCCAGTACCACCTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635466.2
CDS TCA 72 bp CACACTGCTTGGCACTCATCCGTGAACAGGAGGACTTaGCACCCGCAGCATTCTGCATCTCTGCCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: HTAWHSSVNRRT*HPQHSASLPAV
Trigger: GACAGCTGGCAGAGATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAGCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS TCA 72 bp GCAGGGGTAGCTGTCACACTGCTTGGCACTCATCCGTaGACAGGAGGACTTGACACCCGCAGCATTCTGCAT +
Preference number: 6 (lower is better)
Translates to: AGVAVTLLGTHP*TGGLDTRSILH
Trigger: ATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCTACCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp ACCATGAGGAAGTGCCAGCTGCTGTCATTCACCTGCTaGTTGGACAGCACGGCAGTCTCGGCACAGTCCATG +
Preference number: 6 (lower is better)
Translates to: TMRKCQLLSFTC*LDSTAVSAQSM
Trigger: CATGGACTGTGCCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS CAA 72 bp TCCTGGCAGGTGGTACTGGGTCCTTGCAGGTCAGCTTaGGTCAACGCAACTTCACAGCCACGCTCGATCTGT +
Preference number: 6 (lower is better)
Translates to: SWQVVLGPCRSA*VNATSQPRSIC
Trigger: ACAGATCGAGCGTGGCTGTGAAGTTGCGTTGACCAAAGCTGACCTGCAAGGACCCAGTACCACCTGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635466.2
CDS GCA 72 bp AGCGGTTCCAGCCGTCCTTGCACACAGCATTATTCTTaGAGGGGTAGCTGTCACACTGCTTGGCACTCATCC +
Preference number: 6 (lower is better)
Translates to: SGSSRPCTQHYS*RGSCHTAWHSS
Trigger: GGATGAGTGCCAAGCAGTGTGACAGCTACCCCTGCAAGAATAATGCTGTGTGCAAGGACGGCTGGAACCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS GCA 72 bp GAAAGCCATCTCGAGAGGCCACGAGCTTTGGGAGGTTaGTGTACATGCCTTGGGCCAGACCAGCCATATAGA +
Preference number: 6 (lower is better)
Translates to: ESHLERPRALGG*CTCLGPDQPYR
Trigger: TCTATATGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTCGAGATGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CCA 72 bp AGCAGGATGCTGACCTTCAGGGTGAAGAAAACCGAGTaGAGTGTGGAGCTCATTGTCGCTGCTGGGACAGAG +
Preference number: 6 (lower is better)
Translates to: SRMLTFRVKKTE*SVELIVAAGTE
Trigger: CTCTGTCCCAGCAGCGACAATGAGCTCCACACTCCACTCGGTTTTCTTCACCCTGAAGGTCAGCATCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS TCA 72 bp AGATCCAGAATTAACCCCTTGAAGCCGGGCATGGCCTaGACTCCATCAAGGGTCAGGGCAGAAGGTCGTATG +
Preference number: 6 (lower is better)
Translates to: RSRINPLKPGMA*TPSRVRAEGRM
Trigger: CATACGACCTTCTGCCCTGACCCTTGATGGAGTTCAGGCCATGCCCGGCTTCAAGGGGTTAATTCTGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000554738.5
ENST00000634499.2
CDS TCA 72 bp GAGGTGGGAGAGGCCTGGATCTTGACTGACATCTTCTaGGCAGAGCTTGCCACCATAGCCAGTGGTAGAACA +
Preference number: 6 (lower is better)
Translates to: EVGEAWILTDIF*AELATIASGRT
Trigger: TGTTCTACCACTGGCTATGGTGGCAAGCTCTGCTCAGAAGATGTCAGTCAAGATCCAGGCCTCTCCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335750.7
ENST00000556088.1
ENST00000634499.2
CDS GCA 72 bp TTCATGGTGCGGCCAGAAGCAGTGCTGCCCATAACTTaGCTCCCAGGACTCCAGAGAAAAGACCTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: FMVRPEAVLPIT*LPGLQRKDLSS
Trigger: ACTGGAAAGGTCTTTTCTCTGGAGTCCTGGGAGGCAAGTTATGGGCAGCACTGCTTCTGGCCGCACCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000634499.2
CDS GCA 72 bp ACAGGAGGACTTGACACCCGCAGCATTCTGCATCTCTaGCAGCTGTCGAATGTTCTTGCTGCGCCCATCAAT +
Preference number: 6 (lower is better)
Translates to: TGGLDTRSILHL*QLSNVLAAPIN
Trigger: ATTGATGGGCGCAGCAAGAACATTCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp GCAGCATTCTGCATCTCTGCCAGCTGTCGAATGTTCTaGCTGCGCCCATCAATGAATAGGTCGCGGATGCAG +
Preference number: 6 (lower is better)
Translates to: AAFCISASCRMF*LRPSMNRSRMQ
Trigger: CTGCATCCGCGACCTATTCATTGATGGGCGCAGCAAGAACATTCGACAGCTGGCAGAGATGCAGAATGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp TTGTGCCACTGGTTGTCATTCAGGGGGCGGTCACTGTaGCCTTTGATCACATTGGGACCGTTTCCGAGGTCA +
Preference number: 6 (lower is better)
Translates to: LCHWLSFRGRSL*PLITLGPFPRS
Trigger: TGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 90 bp AGACTCAGGCTTCATGGTGCGGCCAGAAGCAGTGCTGCCCATAACTaGCCTCCCAGGACTCCAGAGAAAAGACCTTTCCAGTTGAACAGA +
Preference number: 6 (lower is better)
Translates to: RLRLHGAARSSAAHN*PPRTPEKRPFQLNR
Trigger: TCTGTTCAACTGGAAAGGTCTTTTCTCTGGAGTCCTGGGAGGCAAGTTATGGGCAGCACTGCTTCTGGCCGCACCATGAAGCCTGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000634499.2
CDS TCA 72 bp CCTCTCGAGCTTTACTTCTACCTTGTTCACTCATCATaGGGTGGGAGAGGCCTTCTGAGCAGAGCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: PLELYFYLVHSS*GGRGLLSRACH
Trigger: GTGGCAAGCTCTGCTCAGAAGGCCTCTCCCACCTCATGATGAGTGAACAAGGTAGAAGTAAAGCTCGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554738.5
CDS CCA 72 bp CTGTTCTATGTGAAGCTGGAGGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGACCAAGATGCCATCCTT +
Preference number: 6 (lower is better)
Translates to: LFYVKLEEVTKS*STVDADQDAIL
Trigger: AAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555073.5
ENST00000555387.1
ENST00000556003.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS CCA 72 bp TTTAGTGTTCCACTTGGGCAAGCTGATGTAAGCCTCTaGGGTCTCAAAGTTGATGGGGTCCAGTGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: FSVPLGQADVSL*GLKVDGVQCGH
Trigger: GTGGCCACACTGGACCCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000335750.7
ENST00000553631.1
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS CCA 72 bp CAGTCTTCAAAATACAAGGGCAGGAACCCCCTAGTATaGTTCACGCTCATGTTCCCTGGAGGGCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: QSSKYKGRNPLV*FTLMFPGGLFL
Trigger: CAGGAACAGCCCTCCAGGGAACATGAGCGTGAACCATACTAGGGGGTTCCTGCCCTTGTATTTTGAAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555073.5
CDS CCA 72 bp TCTGACTATGTGAAGCTGGAGGAAGTCACCAAGTCCTaGAGCACTGTCGATGCGGACCAAGATGCCATCCTT +
Preference number: 6 (lower is better)
Translates to: SDYVKLEEVTKS*STVDADQDAIL
Trigger: AAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553803.5
CDS CAA 72 bp CACTGGTTGTCATTCAGGGGGCGGTCACTGTTGCCTTaGATCACATTGGGACCGTTTCCGAGGTCAAAAACG +
Preference number: 6 (lower is better)
Translates to: HWLSFRGRSLLP*ITLGPFPRSKT
Trigger: CGTTTTTGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp CTATTGTCCCGAGTGATGACGACATTGTGCCACTGGTaGTCATTCAGGGGGCGGTCACTGTTGCCTTTGATC +
Preference number: 6 (lower is better)
Translates to: LLSRVMTTLCHW*SFRGRSLLPLI
Trigger: GATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAATGTCGTCATCACTCGGGACAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp AGAGGCCACGAGCTTTGGGAGGTTGCTGTACATGCCTaGGGCCAGACCAGCCATATAGAGATCACCTTTCAA +
Preference number: 6 (lower is better)
Translates to: RGHELWEVAVHA*GQTSHIEITFQ
Trigger: TTGAAAGGTGATCTCTATATGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 90 bp GCCATCTCGAGAGGCCACGAGCTTTGGGAGGTTGCTGTACATGCCTaGGGCCAGACCAGCCATATAGAGATCACCTTTCAAATCCAGATT +
Preference number: 6 (lower is better)
Translates to: AISRGHELWEVAVHA*GQTSHIEITFQIQI
Trigger: AATCTGGATTTGAAAGGTGATCTCTATATGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTCGAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS TCA 72 bp GGACCACTACAGATGGGCAGTTTGAATTCCAGCCAGTaGGGAGTAATGAAGTTCATGATGCCCAAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: GPLQMGSLNSSQ*GVMKFMMPKGP
Trigger: TGGGCCCTTGGGCATCATGAACTTCATTACTCCTCACTGGCTGGAATTCAAACTGCCCATCTGTAGTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281127.11
ENST00000428277.6
ENST00000557594.5
ENST00000676811.1
ENST00000679122.1
CDS TCA 72 bp ACTGGTTGTCATTCAGGGGGCGGTCACTGTTGCCTTTaGTCACATTGGGACCGTTTCCGAGGTCAAAAACGT +
Preference number: 6 (lower is better)
Translates to: TGCHSGGGHCCL*SHWDRFRGQKR
Trigger: ACGTTTTTGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS TCA 72 bp TGTCCTTTCCACCAATGGCTATTTGCGCCTGAGTGTTaGAGATGGTTAACTGCCGGCCTTTTTCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: CPFHQWLFAPEC*RWLTAGLFPAA
Trigger: GGCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000335750.7
ENST00000428277.6
ENST00000554738.5
ENST00000555387.1
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS CCA 72 bp TTACTATTGTCCCGAGTGATGACGACATTGTGCCACTaGTTGTCATTCAGGGGGCGGTCACTGTTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LLLSRVMTTLCH*LSFRGRSLLPL
Trigger: CAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAATGTCGTCATCACTCGGGACAATAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp TTGCCGCCGTTCCTGGTGAAGCGTACCACATGGTATTaGCCGTCATTTACAGGGGTTCTCTCCTCTTTGATG +
Preference number: 6 (lower is better)
Translates to: LPPFLVKRTTWY*PSFTGVLSSLM
Trigger: CATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000556003.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS CAA 72 bp CTGGTGGCATGGAGGTCGTCTGTGTTGTTCCCAAAATaGATGGGACTTCTCCAACCAGCCGAACACTTCCAT +
Preference number: 6 (lower is better)
Translates to: LVAWRSSVLFPK*MGLLQPAEHFH
Trigger: ATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS CAA 90 bp GAAGTCTACTTTTGTATTCTTCTGGCTCCGAGCATCCTTCCTCTCTaGGGGCTTTCCATGAGTGAAGAGGATCAGGCCATTGGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: EVYFCILLAPSILPL*GLSMSEEDQAIGLC
Trigger: ACAGAGCCCAATGGCCTGATCCTCTTCACTCATGGAAAGCCCCAAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS CAA 90 bp AGTACAGGTTGCCATCGAGGAGTTCCACGGCAAAGAAGTCTACTTTaGTATTCTTCTGGCTCCGAGCATCCTTCCTCTCTTGGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: STGCHRGVPRQRSLL*YSSGSEHPSSLGAF
Trigger: GAAAGCCCCAAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTGCCGTGGAACTCCTCGATGGCAACCTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS TCA 72 bp TGGTGGCATGGAGGTCGTCTGTGTTGTTCCCAAAATTaGTGGGACTTCTCCAACCAGCCGAACACTTCCATT +
Preference number: 6 (lower is better)
Translates to: WWHGGRLCCSQN*WDFSNQPNTSI
Trigger: AATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS TCA 72 bp TCCACATGGTACCATTCCCCATCATTGGCTTTCTTCTaGGTGGCTTTCACTTTGATGGTGCCAGAGCCCATG +
Preference number: 6 (lower is better)
Translates to: STWYHSPSLAFF*VAFTLMVPEPM
Trigger: CATGGGCTCTGGCACCATCAAAGTGAAAGCCACTCAGAAGAAAGCCAATGATGGGGAATGGTACCATGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS GCA 72 bp TATGGTTCACGCTCATGTTCCCTGGAGGGCTGTTCCTaGAAACATAAAGCTGATAAGTTGCCGTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: YGSRSCSLEGCS*KHKADKLPCPP
Trigger: AGGAGGACACGGCAACTTATCAGCTTTATGTTTGCAGGAACAGCCCTCCAGGGAACATGAGCGTGAACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555073.5
CDS GCA 72 bp TCATTAATGTCATCCCTGACTGGGTCTGAACAGCCTTaGACAGTCAGCATCTCAGGGTCTGTTCCGCACATA +
Preference number: 6 (lower is better)
Translates to: SLMSSLTGSEQP*TVSISGSVPHI
Trigger: TATGTGCGGAACAGACCCTGAGATGCTGACTGTGCAAGGCTGTTCAGACCCAGTCAGGGATGACATTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553803.5
CDS TCA 72 bp CTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATTaGAGTGGAAAGACTCTTATCTGTACTCGGCTCACA +
Preference number: 6 (lower is better)
Translates to: LGRMCFVATFED*SGKTLICTRLT
Trigger: TGTGAGCCGAGTACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000635466.2
CDS GCA 72 bp GCCAAGCTCGAGTTAATTTCACTGCAGGAATGGAAGTaGAGAGTGCATATCCCTGAGAAAGCACAACCTCAG +
Preference number: 6 (lower is better)
Translates to: AKLELISLQEWK*RVHIPEKAQPQ
Trigger: CTGAGGTTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCGAGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553631.1
ENST00000554719.5
CDS CCA 72 bp AGTTCCACGGCAAAGAAGTCTACTTTTGTATTCTTCTaGCTCCGAGCATCCTTCCTCTCTTGGGGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: SSTAKKSTFVFF*LRASFLSWGFP
Trigger: TGGAAAGCCCCAAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTGCCGTGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS CCA 72 bp TGCCCTGCCAAGCTCGAGTTAATTTCACTGCAGGAATaGAAGTGCAGAGTGCATATCCCTGAGAAAGCACAA +
Preference number: 6 (lower is better)
Translates to: CPAKLELISLQE*KCRVHIPEKAQ
Trigger: TTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCGAGCTTGGCAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553631.1
CDS CCA 72 bp CGAGCTGCCAAGCTCGAGTTAATTTCACTGCAGGAATaGAAGTGCAGAGTGCATATCCCTGAGAAAGCACAA +
Preference number: 6 (lower is better)
Translates to: RAAKLELISLQE*KCRVHIPEKAQ
Trigger: TTGTGCTTTCTCAGGGATATGCACTCTGCACTTCCATTCCTGCAGTGAAATTAACTCGAGCTTGGCAGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554719.5
CDS CAA 72 bp TTTTGTATTCTTCTGGCTCCGAGCATCCTTCCTCTCTaGGGGCTTTCCATGAGTGAAGAGGATCAGGCCATT +
Preference number: 6 (lower is better)
Translates to: FCILLAPSILPL*GLSMSEEDQAI
Trigger: AATGGCCTGATCCTCTTCACTCATGGAAAGCCCCAAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000335750.7
ENST00000553631.1
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp TGCCATCGAGGAGTTCCACGGCAAAGAAGTCTACTTTaGTATTCTTCTGGCTCCGAGCATCCTTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: CHRGVPRQRSLL*YSSGSEHPSSL
Trigger: AAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTGCCGTGGAACTCCTCGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000557081.1
ENST00000634499.2
ENST00000635466.2
CDS CAA 72 bp ACTTGGGCGCATGTGCTTTGTAGCCACCTTCGAAGATaGAAGTGGAAAGACTCTTATCTGTACTCGGCTCAC +
Preference number: 6 (lower is better)
Translates to: TWAHVLCSHLRR*KWKDSYLYSAH
Trigger: GTGAGCCGAGTACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000635466.2
CDS TCA 72 bp CTGTTCACTGATATAGTACCTGATCTGCCATCTCGCTaGATGTCCACATGGTACCATTCCCCATCATTGGCT +
Preference number: 6 (lower is better)
Translates to: LFTDIVPDLPSR*MSTWYHSPSLA
Trigger: AGCCAATGATGGGGAATGGTACCATGTGGACATTCAGCGAGATGGCAGATCAGGTACTATATCAGTGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335750.7
ENST00000554719.5
ENST00000554738.5
ENST00000556496.2
ENST00000634499.2
ENST00000635466.2
CDS TCA 72 bp GGAAGGAAAGATGCAGGAAGGGGAGGGTCATATCTATaGGTGAACTACACAGGAGATGAAGATGATAGGAGT +
Preference number: 6 (lower is better)
Translates to: GRKDAGRGGSYL*VNYTGDEDDRS
Trigger: ACTCCTATCATCTTCATCTCCTGTGTAGTTCACTCATAGATATGACCCTCCCCTTCCTGCATCTTTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS CCA 72 bp GCGCATGTGCTTTGTAGCCACCTTCGAAGATTGAAGTaGAAAGACTCTTATCTGTACTCGGCTCACATTCAA +
Preference number: 6 (lower is better)
Translates to: AHVLCSHLRRLK*KDSYLYSAHIQ
Trigger: TTGAATGTGAGCCGAGTACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000635466.2
CDS CAA 72 bp ATTGATGGGACTTCTCCAACCAGCCGAACACTTCCATaGATTTTAATATTGGGGTTGTTCTCAGCCGCCATG +
Preference number: 6 (lower is better)
Translates to: IDGTSPTSRTLP*ILILGLFSAAM
Trigger: CATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS CCA 72 bp TGTAGTAGTGGTTTCCATGACAGTAGTAGACATTTCTaGTGGCATGGAGGTCGTCTGTGTTGTTCCCAAAAT +
Preference number: 6 (lower is better)
Translates to: CSSGFHDSSRHF*WHGGRLCCSQN
Trigger: ATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAAACCACTACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS TCA 72 bp GGAAAGATGCAGGAAGGGGAGGGTCATATCTATGAGTaGACTACACAGGAGATGAAGATGATAGGAGTAAAT +
Preference number: 6 (lower is better)
Translates to: GKMQEGEGHIYE*TTQEMKMIGVN
Trigger: ATTTACTCCTATCATCTTCATCTCCTGTGTAGTTCACTCATAGATATGACCCTCCCCTTCCTGCATCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554738.5
ENST00000555387.1
CDS CAA 72 bp ACCAGCCGAACACTTCCATTGATTTTAATATTGGGGTaGTTCTCAGCCGCCATGTTCAGTACTTTCAAACCA +
Preference number: 6 (lower is better)
Translates to: TSRTLPLILILG*FSAAMFSTFKP
Trigger: TGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281127.11
ENST00000335750.7
ENST00000428277.6
ENST00000554719.5
ENST00000554738.5
ENST00000555387.1
ENST00000557594.5
ENST00000634499.2
ENST00000635466.2
ENST00000676811.1
ENST00000679122.1
CDS CAA 90 bp CACCTCCTGTACTCGGCTCACATTCAACAAAGTCTTCATCATCACTaGAACATTCAGCAGATGAAACAAGATCATCTGATGTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: HLLYSAHIQQSLHHH*NIQQMKQDHLMLAE
Trigger: TTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557594.5
CDS CAA 90 bp GGTTTGCTGTACTCGGCTCACATTCAACAAAGTCTTCATCATCACTaGAACATTCAGCAGATGAAACAAGATCATCTGATGTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: GLLYSAHIQQSLHHH*NIQQMKQDHLMLAE
Trigger: TTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGCAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428277.6
ENST00000554719.5
ENST00000634499.2
CDS CAA 90 bp CCTTTCCAGTTGAACAGAAGATTTGGGATCTGTCTGTATGTCTGTTaGATGTTTAATCAACTGAGTTTGCTGGGTATGTTTCCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: PFQLNRRFGICLYVC*MFNQLSLLGMFPLW
Trigger: CCAAAGAGGAAACATACCCAGCAAACTCAGTTGATTAAACATCAAACAGACATACAGACAGATCCCAAATCTTCTGTTCAACTGGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000634499.2
CDS CAA 90 bp TCTTATCTGTACTCGGCTCACATTCAACAAAGTCTTCATCATCACTaGAACATTCAGCAGATGAAACAAGATCATCTGATGTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: SYLYSAHIQQSLHHH*NIQQMKQDHLMLAE
Trigger: TTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000635466.2
CDS CAA 90 bp AAATGTCTGTACTCGGCTCACATTCAACAAAGTCTTCATCATCACTaGAACATTCAGCAGATGAAACAAGATCATCTGATGTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: KCLYSAHIQQSLHHH*NIQQMKQDHLMLAE
Trigger: TTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676811.1
CDS CAA 72 bp TCTCCAAACATCTTCACAAAGTTCCAGTATGAAAGGTaGTTGTACTTACGATCATTGCACTGGTTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: SPNIFTKFQYER*LYLRSLHWFPE
Trigger: TTCTGGAAACCAGTGCAATGATCGTAAGTACAACAACCTTTCATACTGGAACTTTGTGAAGATGTTTGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556496.2
CDS CAA 72 bp TTGAACAGAAGATTTGGGATCTGTCTGTATGTCTGTTaGATGTTTAATCAACTGAGTTTGCTGGGTATGTTT +
Preference number: 6 (lower is better)
Translates to: LNRRFGICLYVC*MFNQLSLLGMF
Trigger: AAACATACCCAGCAAACTCAGTTGATTAAACATCAAACAGACATACAGACAGATCCCAAATCTTCTGTTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335750.7
ENST00000634499.2
CDS CAA 72 bp TTTTCTTGTCTGATTAACTTCTATTCATTCTTGAAGTaGCAAAGGCGATACCTCATTAATGTCATCCCTGAC +
Preference number: 6 (lower is better)
Translates to: FSCLINFYSFLK*QRRYLINVIPD
Trigger: GTCAGGGATGACATTAATGAGGTATCGCCTTTGCAACTTCAAGAATGAATAGAAGTTAATCAGACAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553803.5