RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000180530

Ensembl transcript IDs: ENST00000318948.7, ENST00000400199.5, ENST00000400202.5, ENST00000411932.1, ENST00000637630.1, ENST00000637963.1

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTCTCAAACACAAGAAACACCTAGAGAGCATGTTAAGATGCAGATaGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTCTGTAGAT +
Preference number: 1 (lower is better)
Translates to: VLKHKKHLESMLRCR*KIPGPLSRDSCSVD
Trigger: ATCTACAGAACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCTCTCTAGGTGTTTCTTGTGTTTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR GCA 90 bp AATATATTCAACTGGCCAGTGGAATTTTATGTCAGAATAAGCCTATaGCTTCACTTCTCCATGATGTTGCATAATACCCACTCCTATTAC +
Preference number: 1 (lower is better)
Translates to: NIFNWPVEFYVRISL*LHFSMMLHNTHSYY
Trigger: GTAATAGGAGTGGGTATTATGCAACATCATGGAGAAGTGAAGGCATAGGCTTATTCTGACATAAAATTCCACTGGCCAGTTGAATATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR GCA 90 bp AAAAGATCCAATGGAGTGATTGTGTACAATTCTGTCACGTATATGTaGCCTTTGTACTTTTTATTTAGTCAATCTGAGTTTAGTGCCCTT +
Preference number: 1 (lower is better)
Translates to: KRSNGVIVYNSVTYM*PLYFLFSQSEFSAL
Trigger: AAGGGCACTAAACTCAGATTGACTAAATAAAAAGTACAAAGGGCACATATACGTGACAGAATTGTACACAATCACTCCATTGGATCTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGACCTGTTTCGCAACTaGAACCCCATGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPDLFRN*NPMWLH
Trigger: GTGAAGCCACATGGGGTTTCAGTTGCGAAACAGGTC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAATGTTGAGCCAGATATaGAAGTTATCCCCTCCACCC +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPMLSQI*KLSPPP
Trigger: GGGTGGAGGGGATAACTTTCATATCTGGCTCAACAT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTGGGACAGACACATTaGGAACCACAAAACCTCTTC +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVGQTH*EPQNLF
Trigger: GAAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGACCTGTTTCGCAACTaGAACCCCATGTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKDLFRN*NPMWLH
Trigger: GTGAAGCCACATGGGGTTTCAGTTGCGAAACAGGTC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTGCAAATTTTGAGCTaGTGTGTGACTGTATTGGGG +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLQILS*CVTVLG
Trigger: CCCCAATACAGTCACACATCAGCTCAAAATTTGCAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTCAGAATAAGCCTATaGCTTCACTTCTCCATGATG +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVRISL*LHFSMM
Trigger: CATCATGGAGAAGTGAAGGCATAGGCTTATTCTGAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGAATCTGTGGATGTATaGCCTTTCTCACTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPESVDV*PFSLFF
Trigger: AAAGAACAGTGAGAAAGGGCATACATCCACAGATTC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAATGTTAAGATGCAGATaGAAGATTCCAGGTCCACTT +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPMLRCR*KIPGPL
Trigger: AAGTGGACCTGGAATCTTCCATCTGCATCTTAACAT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAACAAAGTGAATCTGTaGATGTATGCCCTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPNKVNL*MYALSH
Trigger: GTGAGAAAGGGCATACATCCACAGATTCACTTTGTT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR CAA 90 bp TCCAATGGAGTGATTGTGTACAATTCTGTCACGTATATGTGCCCTTaGTACTTTTTATTTAGTCAATCTGAGTTTAGTGCCCTTCTTGGG +
Preference number: 2 (lower is better)
Translates to: SNGVIVYNSVTYMCP*YFLFSQSEFSALLG
Trigger: CCCAAGAAGGGCACTAAACTCAGATTGACTAAATAAAAAGTACAAAGGGCACATATACGTGACAGAATTGTACACAATCACTCCATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAAAGATCCAATGGAGTaGTTGTGTACAATTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPKDPME*LCTILS
Trigger: TGACAGAATTGTACACAATCACTCCATTGGATCTTT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGCCTTCACTTCTCCATaGTGTTGCATAATACCCACT +
Preference number: 2 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKAFTSP*CCIIPT
Trigger: AGTGGGTATTATGCAACATCATGGAGAAGTGAAGGC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAACATTTGTCCAGACTTaGAACTGTATACATACATGC +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPTFVQT*NCIHTC
Trigger: GCATGTATGTATACAGTTGCAAGTCTGGACAAATGT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTGCAAATTTTGAGCTaGTGTGTGACTGTATTGGGG +
Preference number: 2 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLQILS*CVTVLG
Trigger: CCCCAATACAGTCACACATCAGCTCAAAATTTGCAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGTCAGAATAAGCCTATaGCTTCACTTCTCCATGATG +
Preference number: 2 (lower is better)
Translates to: ICINKVNLWMYALSHCSLVRISL*LHFSMM
Trigger: CATCATGGAGAAGTGAAGGCATAGGCTTATTCTGAC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGTCAGAATAAGCCTATaGCTTCACTTCTCCATGATG +
Preference number: 2 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKVRISL*LHFSMM
Trigger: CATCATGGAGAAGTGAAGGCATAGGCTTATTCTGAC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGGTCATTTGCTAACCTaGTTCACAATTAAGAACAAA +
Preference number: 2 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPGHLLT*FTIKNK
Trigger: TTTGTTCTTAATTGTGAACCAGGTTAGCAAATGACC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAATCACAGATTTTCCTaGGATGTTGAGCCAGATATG +
Preference number: 2 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKNHRFS*DVEPDM
Trigger: CATATCTGGCTCAACATCTCAGGAAAATCTGTGATT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATGTTAAGATGCAGATaGAAGATTCCAGGTCCACTT +
Preference number: 2 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKMLRCR*KIPGPL
Trigger: AAGTGGACCTGGAATCTTCCATCTGCATCTTAACAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACTGAGATGCTGCCTATaGATCTGCATTTTAAAACAA +
Preference number: 2 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLRCCL*ICILKQ
Trigger: TTGTTTTAAAATGCAGATTCATAGGCAGCATCTCAG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTGGTGAATGAATTGTaGATTGTACAAACTGAACAT +
Preference number: 2 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLVNEL*IVQTEH
Trigger: ATGTTCAGTTTGTACAATCCACAATTCATTCACCAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGGTGGGACAGACACATaGGGAACCACAAAACCTCTT +
Preference number: 3 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCGGTDT*GTTKPL
Trigger: AAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCACC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGGTGGGACAGACACATaGGGAACCACAAAACCTCTT +
Preference number: 3 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWGGTDT*GTTKPL
Trigger: AAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCACC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR GCA 72 bp CTCAAACACAAGAAACACCTAGAGAGCATGTTAAGATaGAGATGGAAGATTCCAGGTCCACTTAGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: LKHKKHLESMLR*RWKIPGPLSRD
Trigger: ATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCTCTCTAGGTGTTTCTTGTGTTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR CCA 72 bp CACAAGAAACACCTAGAGAGCATGTTAAGATGCAGATaGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGT +
Preference number: 3 (lower is better)
Translates to: HKKHLESMLRCR*KIPGPLSRDSC
Trigger: ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCTCTCTAGGTGTTTCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR CCA 72 bp TTAAGGATGCATTCAGGAGAAGTTTCCAAACCATCCTaGAATCACCTGAGTTTGGTAAGTGGCCCTGTTTTT +
Preference number: 3 (lower is better)
Translates to: LRMHSGEVSKPS*NHLSLVSGPVF
Trigger: AAAAACAGGGCCACTTACCAAACTCAGGTGATTCCAGGATGGTTTGGAAACTTCTCCTGAATGCATCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATGGAATCACCTGAGTTaGGTAAGTGGCCCTGTTTTT +
Preference number: 3 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPWNHLS*VSGPVF
Trigger: AAAAACAGGGCCACTTACCAAACTCAGGTGATTCCA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR GCA 72 bp AACTGGCCAGTGGAATTTTATGTCAGAATAAGCCTATaGCTTCACTTCTCCATGATGTTGCATAATACCCAC +
Preference number: 3 (lower is better)
Translates to: NWPVEFYVRISL*LHFSMMLHNTH
Trigger: GTGGGTATTATGCAACATCATGGAGAAGTGAAGGCATAGGCTTATTCTGACATAAAATTCCACTGGCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTATAGGCTACTCACAGTaGTTATCTGATGCATACAGA +
Preference number: 3 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCIGYSQ*LSDAYR
Trigger: TCTGTATGCATCAGATAACAACTGTGAGTAGCCTAT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGGTGGGACAGACACATaGGGAACCACAAAACCTCTT +
Preference number: 3 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKGGTDT*GTTKPL
Trigger: AAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCACC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATGGAATCACCTGAGTTaGGTAAGTGGCCCTGTTTTT +
Preference number: 3 (lower is better)
Translates to: ICINKVNLWMYALSHCSLWNHLS*VSGPVF
Trigger: AAAAACAGGGCCACTTACCAAACTCAGGTGATTCCA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR TCA 72 bp AGAGATTCTTGTTCTGTAGATCTGAGATGCTGCCTATaGATCTGCATTTTAAAACAAGTGCTCCAGATGGTT +
Preference number: 3 (lower is better)
Translates to: RDSCSVDLRCCL*ICILKQVLQMV
Trigger: AACCATCTGGAGCACTTGTTTTAAAATGCAGATTCATAGGCAGCATCTCAGATCTACAGAACAAGAATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATAGGCTACTCACAGTaGTTATCTGATGCATACAGA +
Preference number: 3 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKIGYSQ*LSDAYR
Trigger: TCTGTATGCATCAGATAACAACTGTGAGTAGCCTAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR TCA 72 bp TTTCATCACTACTTTAAAGTAAAAGATCCAATGGAGTaGTTGTGTACAATTCTGTCACGTATATGTGCCCTT +
Preference number: 3 (lower is better)
Translates to: FHHYFKVKDPME*LCTILSRICAL
Trigger: AAGGGCACATATACGTGACAGAATTGTACACAATCACTCCATTGGATCTTTTACTTTAAAGTAGTGATGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR CCA 72 bp TGGCAAATTATATTACTGAGCAGATCGCATCAAATTTaGTTGTGTAAACACCAGAATTCTTACTATGAATGG +
Preference number: 3 (lower is better)
Translates to: WQIILLSRSHQI*LCKHQNSYYEW
Trigger: CCATTCATAGTAAGAATTCTGGTGTTTACACAACCAAATTTGATGCGATCTGCTCAGTAATATAATTTGCCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGTCAACGGCAGTACCTaGTCCCCCTGCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCVNGST*SPCCLM
Trigger: CATCAGGCAGCAGGGGGATCAGGTACTGCCGTTGAC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGCAGGTGCGCTTCTCTaGACAGCAGGAGCCATACCC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCAGALL*TAGAIP
Trigger: GGGTATGGCTCCTGCTGTGCAGAGAAGCGCACCTGC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTCAACGGCAGTACCTaGTCCCCCTGCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVNGST*SPCCLM
Trigger: CATCAGGCAGCAGGGGGATCAGGTACTGCCGTTGAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGCAGGTGCGCTTCTCTaGACAGCAGGAGCCATACCC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWAGALL*TAGAIP
Trigger: GGGTATGGCTCCTGCTGTGCAGAGAAGCGCACCTGC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCCTGCACAGCCCAAGTaGTCAGGGAAAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCPAQPK*SGKVGL
Trigger: GAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGACCTGTTTCGCAACTaGAACCCCATGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCDLFRN*NPMWLH
Trigger: GTGAAGCCACATGGGGTTTCAGTTGCGAAACAGGTC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTGAGGGCATATCCTTaGTCCTTGAGGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLRAYP*SLRLCL
Trigger: CAGGCAGAGCCTCAAGGAGCAAGGATATGCCCTCAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCTGAGGGCATATCCTTaGTCCTTGAGGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWLRAYP*SLRLCL
Trigger: CAGGCAGAGCCTCAAGGAGCAAGGATATGCCCTCAG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGCAGGTGCGCTTCTCTaGACAGCAGGAGCCATACCC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLAGALL*TAGAIP
Trigger: GGGTATGGCTCCTGCTGTGCAGAGAAGCGCACCTGC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTCTGGTCTAGACCCTaGACAGCCCAAGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWFWSRP*TAQVLR
Trigger: CCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCACTCTTCCCTTTGTTaGGGTTCCCCAGGAGCAACT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCHSSLC*GSPGAT
Trigger: AGTTGCTCCTGGGGAACCCCAACAAAGGGAAGAGTG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTGTGTTCACTTTCGCTaGCTGAGCCATGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCCVHFR*LSHDQQ
Trigger: CTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGATCCCCCTGCTGCCTaGTGCATTAGTAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCDPPAA*CISNPS
Trigger: AGAAGGATTACTAATGCATCAGGCAGCAGGGGGATC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGTCAACGGCAGTACCTaGTCCCCCTGCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLVNGST*SPCCLM
Trigger: CATCAGGCAGCAGGGGGATCAGGTACTGCCGTTGAC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCAGCCTAGAGCTGAATaGCTGAAGCAAAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWQPRAE*LKQRGQ
Trigger: CTGGCCTCTTTGCTTCAGTCATTCAGCTCTAGGCTG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAACACTAGGTTTAGGTaGGGTGGCAGGACTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWNTRFR*GGRTSP
Trigger: AGGGCTAGTCCTGCCACCTCACCTAAACCTAGTGTT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGTGTTGAGAGAGATTaGTGGGAGACCCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSVERD*WETLLC
Trigger: GCAAAGCAGGGTCTCCCATCAATCTCTCTCAACACT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTCACTTTCGCTGGCTaGGCCATGACCAGCAGGATA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWFTFAG*AMTSRI
Trigger: TATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCCTCTTCCGCTTTGCTaGATTCCAGTCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCPLPLC*IPVLRR
Trigger: TCTTCTGAGGACTGGAATGCAGCAAAGCGGAAGAGG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACAGCCTCTTCCGCTTTaGTGCATTCCAGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPQPLPL*CIPVLR
Trigger: TCTGAGGACTGGAATGCAGCAAAGCGGAAGAGGCTG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCGTTGCAGAGTTCTGTaGACCTTCATTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCRCRVL*TFILGW
Trigger: CCAGCCCAAAATGAAGGTGCACAGAACTCTGCAACG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACACTCTTCCCTTTGTTaGGGTTCCCCAGGAGCAACT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPHSSLC*GSPGAT
Trigger: AGTTGCTCCTGGGGAACCCCAACAAAGGGAAGAGTG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATGTGTTCACTTTCGCTaGCTGAGCCATGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPCVHFR*LSHDQQ
Trigger: CTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGCTTTTGCTCTCTCTaGCCCAACTCCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSFCSL*PNSCVH
Trigger: GTGAACACAGGAGTTGGGCCAGAGAGAGCAAAAGCT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTACTGGACCATTACTTTaGCAGGTGGGAAATGCACTG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCTGPLL*QVGNAL
Trigger: CAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTTCCTCTCTCACTGTaGCTGTGTCCATTCATTGGC +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLPLSL*LCPFIG
Trigger: GCCAATGAATGGACACAGTCACAGTGAGAGAGGAAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAGTGTTGAGAGAGATTaGTGGGAGACCCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSVERD*WETLLC
Trigger: GCAAAGCAGGGTCTCCCATCAATCTCTCTCAACACT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTATGACCAGAGAGTGTTaGGAGAGATTGATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCMTREC*ERLMGD
Trigger: GTCTCCCATCAATCTCTCTCAACACTCTCTGGTCAT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTCTGTGACTCCTGTCTaGATCATCTGCCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSVTPV*IICQVT
Trigger: AGTTACCTGGCAGATGATTCAGACAGGAGTCACAGA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGATGCAACTGCTGGGCTaGGTGGAACTGTACATCAGT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWMQLLG*VELYIS
Trigger: ACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCAT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACCTCTTCCGCTTTGCTaGATTCCAGTCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPPLPLC*IPVLRR
Trigger: TCTTCTGAGGACTGGAATGCAGCAAAGCGGAAGAGG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGCACACTGTCAACCATaGCAGCTAGCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPAHCQP*QLAKLP
Trigger: AGGAAGCTTTGCTAGCTGGCATGGTTGACAGTGTGC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGACAGAGCAACAGTCTaGAGCCTAGAGCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPDRATV*SLELND
Trigger: GTCATTCAGCTCTAGGCTGCAGACTGTTGCTCTGTC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTGGGAGCTGGTAACTaGCAACATCCTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLGAGN*QHPSGH
Trigger: ATGGCCAGAAGGATGTTGGCAGTTACCAGCTCCCAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTGGGAGCTGGTAACTaGCAACATCCTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWLGAGN*QHPSGH
Trigger: ATGGCCAGAAGGATGTTGGCAGTTACCAGCTCCCAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCGTTGCAGAGTTCTGTaGACCTTCATTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWRCRVL*TFILGW
Trigger: CCAGCCCAAAATGAAGGTGCACAGAACTCTGCAACG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTACTGGCACTAAACGTTaGAGAGTTCTGTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCTGTKR*RVLCTF
Trigger: GAAGGTGCACAGAACTCTGCAACGTTTAGTGCCAGT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTGTTTGCTGGGTCTCTaGTCTTCCACTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCCLLGL*SSTDMD
Trigger: ATCCATGTCAGTGGAAGAGCAGAGACCCAGCAAACA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCAGTTAACAGCTGTTTaGTGGGTCTCTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCQLTAV*WVSALP
Trigger: TGGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGATGTCCTGTTATCCATaGAACTGCTGGGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWMSCYP*NCWAEW
Trigger: CCACTCAGCCCAGCAGTTGCATGGATAACAGGACAT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACCTGCACAGCCCAAGTaGTCAGGGAAAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLPAQPK*SGKVGL
Trigger: GAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATTCTGGTCTAGACCCTaGACAGCCCAAGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLFWSRP*TAQVLR
Trigger: CCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTATAAACTTCTCCATTTaGGCTGTGTGGGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCINFSI*AVWARS
Trigger: GCTTCTCGCCCACACAGCGCAAATGGAGAAGTTTAT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGACATTTTGCCAAATaGACAGATGCACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCRHFAK*TDAQGP
Trigger: GGGACCCTGTGCATCTGTGCATTTGGCAAAATGTCT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGGTGGAGTGCTCACTaGAGTAGTCCGATTTGTACT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCRWSAH*SSPICT
Trigger: AGTACAAATCGGACTACTCCAGTGAGCACTCCACCT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTTAACAGCTGTTTGCTaGGTCTCTGCTCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCLTAVC*VSALPL
Trigger: CAGTGGAAGAGCAGAGACCCAGCAAACAGCTGTTAA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTCCCCAGGAGCAACTaGAGGACAGTACGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPFPRSN*RTVRLS
Trigger: TGAAAGACGTACTGTCCTCCAGTTGCTCCTGGGGAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTCCCCAGGAGCAACTaGAGGACAGTACGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWFPRSN*RTVRLS
Trigger: TGAAAGACGTACTGTCCTCCAGTTGCTCCTGGGGAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCCCATACAGTACTTCTaGGGCACTGTGATTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCPIQYF*GTVIVC
Trigger: GCAAACAATCACAGTGCCCCAGAAGTACTGTATGGG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTATCCATGCAACTGCTaGGCTGAGTGGAACTGTACA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCYPCNC*AEWNCT
Trigger: TGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCTTTCTCACTGGGCATaGAACACCCATTCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCLSHWA*NTHSKA
Trigger: GGCTTTTGAATGGGTGTTCCATGCCCAGTGAGAAAG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATGGGTCCTTTCTCACTaGGCATGGAACACCCATTCA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPWVLSH*AWNTHS
Trigger: TGAATGGGTGTTCCATGCCCAGTGAGAAAGGACCCA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTCCATTTGCGCTGTGTaGGCGAGAAGCATTATTTCC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSICAV*ARSIIS
Trigger: GGAAATAATGCTTCTCGCCCACACAGCGCAAATGGA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGTGGGACAGACACATTaGGAACCACAAAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCVGQTH*EPQNLF
Trigger: GAAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCAC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGACTGGACCATTACTTTaGCAGGTGGGAAATGCACTG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWTGPLL*QVGNAL
Trigger: CAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGCATGCCAGACCCCTaGTATGTATGTGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSMPDP*YVCVLR
Trigger: TCTCAATACACATACATATCAGGGGTCTGGCATGCT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAACACTAGGTTTAGGTaGGGTGGCAGGACTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLNTRFR*GGRTSP
Trigger: AGGGCTAGTCCTGCCACCTCACCTAAACCTAGTGTT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGAGAAAGAAAAATCCTaGGGTGAAACAGGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCEKEKS*GETGSD
Trigger: ATCGGAGCCTGTTTCACCTCAGGATTTTTCTTTCTC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGACTTCTGGGGCACTGTaGTTGTTTGCAGCATCAACA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWTSGAL*LFAAST
Trigger: TGTTGATGCTGCAAACAATCACAGTGCCCCAGAAGT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGACTCTTCTTTGGCTGTaGCCTGTGAGACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWTLLWL*PVRHFQ
Trigger: CTGAAAGTGTCTCACAGGTCACAGCCAAAGAAGAGT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGATGTTGAGCCAGATATaGAAGTTATCCCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWMLSQI*KLSPPP
Trigger: GGGTGGAGGGGATAACTTTCATATCTGGCTCAACAT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGACCTGTTTCGCAACTaGAACCCCATGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLDLFRN*NPMWLH
Trigger: GTGAAGCCACATGGGGTTTCAGTTGCGAAACAGGTC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGCCTTCACTTCTCCATaGTGTTGCATAATACCCACT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCAFTSP*CCIIPT
Trigger: AGTGGGTATTATGCAACATCATGGAGAAGTGAAGGC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTACAATAGAATCCTGGTaGACATCAGAGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCTIESW*TSEPSS
Trigger: AGAGCTTGGCTCTGATGTGCACCAGGATTCTATTGT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTGAGGGCATATCCTTaGTCCTTGAGGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLRAYP*SLRLCL
Trigger: CAGGCAGAGCCTCAAGGAGCAAGGATATGCCCTCAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTCTCGAGAATACTGCTaGAAATGGGCTTCGCTTGAC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSREYC*KWASLD
Trigger: GTCAAGCGAAGCCCATTTGCAGCAGTATTCTCGAGA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTGTTCTCGAGAATACTaGTGCAAATGGGCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCCSREY*CKWASL
Trigger: AAGCGAAGCCCATTTGCAGCAGTATTCTCGAGAACA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGACTGGCACTAAACGTTaGAGAGTTCTGTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWTGTKR*RVLCTF
Trigger: GAAGGTGCACAGAACTCTGCAACGTTTAGTGCCAGT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACAGTTAACAGCTGTTTaGTGGGTCTCTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPQLTAV*WVSALP
Trigger: TGGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAACAGAGTTACTTCTGTaGGGGGACAAATCTCGCACA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPTELLL*GDKSRT
Trigger: TGTGCGAGATTTGTCCCCGCACAGAAGTAACTCTGT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGACAGAGTTACTTCTGTaGGGGGACAAATCTCGCACA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWTELLL*GDKSRT
Trigger: TGTGCGAGATTTGTCCCCGCACAGAAGTAACTCTGT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATGTTATCCATGCAACTaGTGGGCTGAGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPCYPCN*WAEWNC
Trigger: ACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACCTGCACAGCCCAAGTaGTCAGGGAAAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKPAQPK*SGKVGL
Trigger: GAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTCTGGTCTAGACCCTaGACAGCCCAAGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLFWSRP*TAQVLR
Trigger: CCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAATAAACTTCTCCATTTaGGCTGTGTGGGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPINFSI*AVWARS
Trigger: GCTTCTCGCCCACACAGCGCAAATGGAGAAGTTTAT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAGACATTTTGCCAAATaGACAGATGCACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWRHFAK*TDAQGP
Trigger: GGGACCCTGTGCATCTGTGCATTTGGCAAAATGTCT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCAAGTGTGCATCTTCTaGCTGTGTTTCTCCCAAATG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCQVCIF*LCFSQM
Trigger: CATTTGGGAGAAACACAGCCAGAAGATGCACACTTG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318948.7
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGGTGGAGTGCTCACTaGAGTAGTCCGATTTGTACT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPRWSAH*SSPICT
Trigger: AGTACAAATCGGACTACTCCAGTGAGCACTCCACCT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGGCTGGTTTCTCTCCTaGTGGGTCTTTGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWGWFLS*WVFAFC
Trigger: ACAAAAAGCAAAGACCCACCAGGAGAGAAACCAGCC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATGTGCACCTTCATTTTaGGCTGGTTTCTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPCAPSF*AGFSPG
Trigger: ACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGCTCTTCCACTGACATaGATGACTGCATTCCACATT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCALPLT*MTAFHI
Trigger: AATGTGGAATGCAGTCATCCATGTCAGTGGAAGAGC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTAACAGCTGTTTGCTaGGTCTCTGCTCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLTAVC*VSALPL
Trigger: CAGTGGAAGAGCAGAGACCCAGCAAACAGCTGTTAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACACTCTTCCCTTTGTTaGGGTTCCCCAGGAGCAACT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLHSSLC*GSPGAT
Trigger: AGTTGCTCCTGGGGAACCCCAACAAAGGGAAGAGTG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGCCATACCCAAGAATaGGGCACTCTTAGCATCATG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPSHTQE*GTLSIM
Trigger: CATGATGCTAAGAGTGCCCCATTCTTGGGTATGGCT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACCCATACAGTACTTCTaGGGCACTGTGATTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPPIQYF*GTVIVC
Trigger: GCAAACAATCACAGTGCCCCAGAAGTACTGTATGGG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAACTGCTGGGCTGAGTaGAACTGTACATCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPNCWAE*NCTSVH
Trigger: ATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTATCCATGCAACTGCTaGGCTGAGTGGAACTGTACA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWYPCNC*AEWNCT
Trigger: TGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTCCATTTGCGCTGTGTaGGCGAGAAGCATTATTTCC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSICAV*ARSIIS
Trigger: GGAAATAATGCTTCTCGCCCACACAGCGCAAATGGA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTAGAGCTGAATGACTaGAGCAAAGAGGCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLELND*SKEASN
Trigger: ATTACTGGCCTCTTTGCTTCAGTCATTCAGCTCTAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACAGCCTAGAGCTGAATaGCTGAAGCAAAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKQPRAE*LKQRGQ
Trigger: CTGGCCTCTTTGCTTCAGTCATTCAGCTCTAGGCTG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACAGCCTAGAGCTGAATaGCTGAAGCAAAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLQPRAE*LKQRGQ
Trigger: CTGGCCTCTTTGCTTCAGTCATTCAGCTCTAGGCTG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTTAAAGAATCATGACTaGGGGCATATCCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCLKNHD*GHILAP
Trigger: AGGAGCAAGGATATGCCCTCAGTCATGATTCTTTAA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGACAACGGTTCACTCATaGCCTTTGTTCCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWTTVHS*PLFHFV
Trigger: GACAAAGTGGAACAAAGGTCATGAGTGAACCGTTGT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACACTAGGTTTAGGTaGGGTGGCAGGACTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLNTRFR*GGRTSP
Trigger: AGGGCTAGTCCTGCCACCTCACCTAAACCTAGTGTT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAACCATTAAGATGGCTTaGCATTCCTTTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPTIKMA*HSFWEL
Trigger: CAGCTCCCAAAAGGAATGTCAAGCCATCTTAATGGT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTTAGCAAGGATTGAGTaGAGTTATCCAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCLARIE*SYPGKQ
Trigger: CTGTTTCCCTGGATAACTTCACTCAATCCTTGCTAA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGTGTTTAGCAAGGATTaGGTGAAGTTATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCVFSKD*VKLSRE
Trigger: TTCCCTGGATAACTTCACTCAATCCTTGCTAAACAC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAGTGTTGAGAGAGATTaGTGGGAGACCCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLSVERD*WETLLC
Trigger: GCAAAGCAGGGTCTCCCATCAATCTCTCTCAACACT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGTTAGCTTTTCAGACTaGGTACTGCAGACATATGGT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCVSFSD*VLQTYG
Trigger: ACCATATGTCTGCAGTACTCAGTCTGAAAAGCTAAC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGAGAAAGAAAAATCCTaGGGTGAAACAGGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWEKEKS*GETGSD
Trigger: ATCGGAGCCTGTTTCACCTCAGGATTTTTCTTTCTC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATTCACTTTCGCTGGCTaGGCCATGACCAGCAGGATA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKFTFAG*AMTSRI
Trigger: TATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTCACTTTCGCTGGCTaGGCCATGACCAGCAGGATA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLFTFAG*AMTSRI
Trigger: TATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGACACTTTCAGCAGATaGAGCCTCCCTCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLDTFSR*SLPPNV
Trigger: GACATTTGGAGGGAGGCTTCATCTGCTGAAAGTGTC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACAGCCTCTTCCGCTTTaGTGCATTCCAGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKQPLPL*CIPVLR
Trigger: TCTGAGGACTGGAATGCAGCAAAGCGGAAGAGGCTG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACAGCCTCTTCCGCTTTaGTGCATTCCAGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLQPLPL*CIPVLR
Trigger: TCTGAGGACTGGAATGCAGCAAAGCGGAAGAGGCTG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGCACACTGTCAACCATaGCAGCTAGCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLAHCQP*QLAKLP
Trigger: AGGAAGCTTTGCTAGCTGGCATGGTTGACAGTGTGC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATTGGGAGCTGGTAACTaGCAACATCCTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLLGAGN*QHPSGH
Trigger: ATGGCCAGAAGGATGTTGGCAGTTACCAGCTCCCAA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTTTCAGACTGAGTACTaGAGACATATGGTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCFQTEY*RHMVGN
Trigger: ATTCCCCACCATATGTCTGCAGTACTCAGTCTGAAA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACGTTGCAGAGTTCTGTaGACCTTCATTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLRCRVL*TFILGW
Trigger: CCAGCCCAAAATGAAGGTGCACAGAACTCTGCAACG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGAATACTGCTGCAAATaGGCTTCGCTTGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPEYCCK*ASLDRS
Trigger: ACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGCTCTTCCACTGACATaGATGACTGCATTCCACATT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPALPLT*MTAFHI
Trigger: AATGTGGAATGCAGTCATCCATGTCAGTGGAAGAGC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATTCCCCAGGAGCAACTaGAGGACAGTACGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLFPRSN*RTVRLS
Trigger: TGAAAGACGTACTGTCCTCCAGTTGCTCCTGGGGAA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAATTTCAGCTCTTCCTaGTTAAGCAAGGACCCATAC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCNFSSS*LSKDPY
Trigger: GTATGGGTCCTTGCTTAACCAGGAAGAGCTGAAATT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATGTGTTCACTTTCGCTaGCTGAGCCATGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLCVHFR*LSHDQQ
Trigger: CTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATGGGTCCTTTCTCACTaGGCATGGAACACCCATTCA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLWVLSH*AWNTHS
Trigger: TGAATGGGTGTTCCATGCCCAGTGAGAAAGGACCCA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGATTTCTTCTGGCAATaGCAAGATAAATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCDFFWQ*QDKCSL
Trigger: CAGACTGCATTTATCTTGTCATTGCCAGAAGAAATC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACCAAGCTCTTCTCCATaGGTCATGTTCAATAGAAGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPPSSSP*VMFNRS
Trigger: ACTTCTATTGAACATGACTCATGGAGAAGAGCTTGG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGATCCCCCTGCTGCCTaGTGCATTAGTAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKDPPAA*CISNPS
Trigger: AGAAGGATTACTAATGCATCAGGCAGCAGGGGGATC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAACTGGACCATTACTTTaGCAGGTGGGAAATGCACTG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLTGPLL*QVGNAL
Trigger: CAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTGCCTGATTTGTTGTaGCAGAGCAACAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLPDLL*QSNSLQ
Trigger: CTGCAGACTGTTGCTCTGTCACAACAAATCAGGCAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACTGCCTGATTTGTTGTaGCAGAGCAACAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLPDLL*QSNSLQ
Trigger: CTGCAGACTGTTGCTCTGTCACAACAAATCAGGCAG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTAAAGAATCATGACTaGGGGCATATCCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLKNHD*GHILAP
Trigger: AGGAGCAAGGATATGCCCTCAGTCATGATTCTTTAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTAAAGAATCATGACTaGGGGCATATCCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWLKNHD*GHILAP
Trigger: AGGAGCAAGGATATGCCCTCAGTCATGATTCTTTAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACTTCCTCTCTCACTGTaGCTGTGTCCATTCATTGGC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLPLSL*LCPFIG
Trigger: GCCAATGAATGGACACAGTCACAGTGAGAGAGGAAG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTTCCTCTCTCACTGTaGCTGTGTCCATTCATTGGC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLPLSL*LCPFIG
Trigger: GCCAATGAATGGACACAGTCACAGTGAGAGAGGAAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTGTTTAGCAAGGATTaGGTGAAGTTATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVFSKD*VKLSRE
Trigger: TTCCCTGGATAACTTCACTCAATCCTTGCTAAACAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGTGTTTAGCAAGGATTaGGTGAAGTTATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWVFSKD*VKLSRE
Trigger: TTCCCTGGATAACTTCACTCAATCCTTGCTAAACAC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTTAGCTTTTCAGACTaGGTACTGCAGACATATGGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVSFSD*VLQTYG
Trigger: ACCATATGTCTGCAGTACTCAGTCTGAAAAGCTAAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTCTCTGAGTGTTCCTaGGTACTTTCATCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLSECS*VLSSLK
Trigger: CTTAAGAGATGAAAGTACTCAGGAACACTCAGAGAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCTCTCTGAGTGTTCCTaGGTACTTTCATCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWLSECS*VLSSLK
Trigger: CTTAAGAGATGAAAGTACTCAGGAACACTCAGAGAG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATCTGTGACTCCTGTCTaGATCATCTGCCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLSVTPV*IICQVT
Trigger: AGTTACCTGGCAGATGATTCAGACAGGAGTCACAGA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAACTTCTGGGGCACTGTaGTTGTTTGCAGCATCAACA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLTSGAL*LFAAST
Trigger: TGTTGATGCTGCAAACAATCACAGTGCCCCAGAAGT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATCGCTGGCTGAGCCATaGCCAGCAGGATATTTAAAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLSLAEP*PAGYLN
Trigger: ATTTAAATATCCTGCTGGTCATGGCTCAGCCAGCGA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAATGCAACTGCTGGGCTaGGTGGAACTGTACATCAGT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLMQLLG*VELYIS
Trigger: ACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCAT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATGCAACTGCTGGGCTaGGTGGAACTGTACATCAGT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKMQLLG*VELYIS
Trigger: ACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGACACTTTCAGCAGATaGAGCCTCCCTCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLDTFSR*SLPPNV
Trigger: GACATTTGGAGGGAGGCTTCATCTGCTGAAAGTGTC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAACTCTTCTTTGGCTGTaGCCTGTGAGACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLTLLWL*PVRHFQ
Trigger: CTGAAAGTGTCTCACAGGTCACAGCCAAAGAAGAGT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTGCAAATTTTGAGCTaGTGTGTGACTGTATTGGGG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWLQILS*CVTVLG
Trigger: CCCCAATACAGTCACACATCAGCTCAAAATTTGCAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAATGTTGAGCCAGATATaGAAGTTATCCCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLMLSQI*KLSPPP
Trigger: GGGTGGAGGGGATAACTTTCATATCTGGCTCAACAT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTTGACAGGTGGGAAATaGACTGCCAGAAATGTTAAA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCLTGGK*TARNVK
Trigger: TTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACCTCTTCCGCTTTGCTaGATTCCAGTCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLPLPLC*IPVLRR
Trigger: TCTTCTGAGGACTGGAATGCAGCAAAGCGGAAGAGG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGACAGAGCAACAGTCTaGAGCCTAGAGCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKDRATV*SLELND
Trigger: GTCATTCAGCTCTAGGCTGCAGACTGTTGCTCTGTC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATGTTTGCTGGGTCTCTaGTCTTCCACTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLCLLGL*SSTDMD
Trigger: ATCCATGTCAGTGGAAGAGCAGAGACCCAGCAAACA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATGTTATCCATGCAACTaGTGGGCTGAGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLCYPCN*WAEWNC
Trigger: ACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATGTCCTGTTATCCATaGAACTGCTGGGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKMSCYP*NCWAEW
Trigger: CCACTCAGCCCAGCAGTTGCATGGATAACAGGACAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGAGAGCATGTTAAGATaGAGATGGAAGATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPESMLR*RWKIPG
Trigger: ACCTGGAATCTTCCATCTGCATCTTAACATGCTCTC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGAATCTGTGGATGTATaGCCTTTCTCACTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCESVDV*PFSLFF
Trigger: AAAGAACAGTGAGAAAGGGCATACATCCACAGATTC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAAAACAATAGAATCCTaGTGCACATCAGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWKTIES*CTSEPS
Trigger: GCTTGGCTCTGATGTGCACCAGGATTCTATTGTTTT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGAAGTAATGCTAACTaGCTACAAGCAACACTAGGT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCRSNAN*LQATLG
Trigger: ACCTAGTGTTGCTTGTAGCCAGTTAGCATTACTTCT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAACTGTGTCCATTCATTaGCTTAGGTATAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPTVSIH*LRYSLA
Trigger: AGCCAGACTATACCTAAGCCAATGAATGGACACAGT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGACTGTGTCCATTCATTaGCTTAGGTATAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWTVSIH*LRYSLA
Trigger: AGCCAGACTATACCTAAGCCAATGAATGGACACAGT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAGGTGGAGTGCTCACTaGAGTAGTCCGATTTGTACT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLRWSAH*SSPICT
Trigger: AGTACAAATCGGACTACTCCAGTGAGCACTCCACCT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTGGTTTCTCTCCTGGTaGGTCTTTGCTTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWWFLSW*VFAFCK
Trigger: CTTACAAAAAGCAAAGACCCACCAGGAGAGAAACCA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATGTGCACCTTCATTTTaGGCTGGTTTCTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLCAPSF*AGFSPG
Trigger: ACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTGGTTCAGGACCTGTTaGTTGACTACTAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCWFRTC*LTTKCF
Trigger: AAAGCATTTAGTAGTCAACCAACAGGTCCTGAACCA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAATTTCAGCTCTTCCTaGTTAAGCAAGGACCCATAC +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPNFSSS*LSKDPY
Trigger: GTATGGGTCCTTGCTTAACCAGGAAGAGCTGAAATT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAGCTTTTGCTCTCTCTaGCCCAACTCCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSFCSL*PNSCVH
Trigger: GTGAACACAGGAGTTGGGCCAGAGAGAGCAAAAGCT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAACTGCTGGGCTGAGTaGAACTGTACATCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLNCWAE*NCTSVH
Trigger: ATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATGGGTCCTTTCTCACTaGGCATGGAACACCCATTCA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKWVLSH*AWNTHS
Trigger: TGAATGGGTGTTCCATGCCCAGTGAGAAAGGACCCA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGTGGGACAGACACATTaGGAACCACAAAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLVGQTH*EPQNLF
Trigger: GAAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCAC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTATGTTAAGATGCAGATaGAAGATTCCAGGTCCACTT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCMLRCR*KIPGPL
Trigger: AAGTGGACCTGGAATCTTCCATCTGCATCTTAACAT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTTTCCAAACCATCCTaGAATCACCTGAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVSKPS*NHLSLV
Trigger: TACCAAACTCAGGTGATTCCAGGATGGTTTGGAAAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGATTTCTTCTGGCAATaGCAAGATAAATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWDFFWQ*QDKCSL
Trigger: CAGACTGCATTTATCTTGTCATTGCCAGAAGAAATC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACTAGAGCTGAATGACTaGAGCAAAGAGGCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLLELND*SKEASN
Trigger: ATTACTGGCCTCTTTGCTTCAGTCATTCAGCTCTAG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCTTTCACTTGCTGCTTaGTTTGCATTTTGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCLSLAA*FAFCVF
Trigger: AAAAACGCAAAATGCAAATCAAGCAGCAAGTGAAAG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAACCATTAAGATGGCTTaGCATTCCTTTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLTIKMA*HSFWEL
Trigger: CAGCTCCCAAAAGGAATGTCAAGCCATCTTAATGGT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAGGTTGGTCAGATTCTaGTTTTTCAGTTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWRLVRF*FFSSVF
Trigger: AAACACCGAACTGAAAAATCAGAATCTGACCAACCT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATGACCAGAGAGTGTTaGGAGAGATTGATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKMTREC*ERLMGD
Trigger: GTCTCCCATCAATCTCTCTCAACACTCTCTGGTCAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAATGACCAGAGAGTGTTaGGAGAGATTGATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLMTREC*ERLMGD
Trigger: GTCTCCCATCAATCTCTCTCAACACTCTCTGGTCAT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTCAGGACCTGTTGGTTaGCTACTAAATGCTTTATTT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSGPVG*LLNALF
Trigger: AAATAAAGCATTTAGTAGTCAACCAACAGGTCCTGA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGAAAAATCCTGAGGTaGAACAGGCTCCGATTTAAA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPRKILR*NRLRFK
Trigger: TTTAAATCGGAGCCTGTTTCACCTCAGGATTTTTCT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGAGAAAGAAAAATCCTaGGGTGAAACAGGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLEKEKS*GETGSD
Trigger: ATCGGAGCCTGTTTCACCTCAGGATTTTTCTTTCTC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAACTTCTGGGGCACTGTaGTTGTTTGCAGCATCAACA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKTSGAL*LFAAST
Trigger: TGTTGATGCTGCAAACAATCACAGTGCCCCAGAAGT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATCGCTGGCTGAGCCATaGCCAGCAGGATATTTAAAT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSLAEP*PAGYLN
Trigger: ATTTAAATATCCTGCTGGTCATGGCTCAGCCAGCGA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATACTACACCTGGGTATaGAAATGTCCTGTTATCCAT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPYYTWV*KCPVIH
Trigger: ATGGATAACAGGACATTTTCATACCCAGGTGTAGTA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAACTCTTCTTTGGCTGTaGCCTGTGAGACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKTLLWL*PVRHFQ
Trigger: CTGAAAGTGTCTCACAGGTCACAGCCAAAGAAGAGT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAATGTTGAGCCAGATATaGAAGTTATCCCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLMLSQI*KLSPPP
Trigger: GGGTGGAGGGGATAACTTTCATATCTGGCTCAACAT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAATCACAGATTTTCCTaGGATGTTGAGCCAGATATG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWNHRFS*DVEPDM
Trigger: CATATCTGGCTCAACATCTCAGGAAAATCTGTGATT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGCCTTCACTTCTCCATaGTGTTGCATAATACCCACT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLAFTSP*CCIIPT
Trigger: AGTGGGTATTATGCAACATCATGGAGAAGTGAAGGC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTACTGTCATGTTAGGATaGACATCTGATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCTVMLG*TSDLIC
Trigger: ACAAATCAGATCAGATGTTCATCCTAACATGACAGT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACAAGCTCTGAGCCTCTaGTTTCTGAGAAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPQALSL*FLRKKI
Trigger: AATTTTCTTTCTCAGAAAGCAGAGGCTCAGAGCTTG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318948.7
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTGACAGGTGGGAAATaGACTGCCAGAAATGTTAAA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLTGGK*TARNVK
Trigger: TTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATCTCGAGAATACTGCTaGAAATGGGCTTCGCTTGAC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSREYC*KWASLD
Trigger: GTCAAGCGAAGCCCATTTGCAGCAGTATTCTCGAGA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATACTTTCCTCAAAAATaGTTCCTCTCTCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPYFPQK*FLSHCD
Trigger: GTCACAGTGAGAGAGGAAGCATTTTTGAGGAAAGTA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAACTGGCACTAAACGTTaGAGAGTTCTGTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLTGTKR*RVLCTF
Trigger: GAAGGTGCACAGAACTCTGCAACGTTTAGTGCCAGT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAACTGACATGGATGACTaGATTCCACATTGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPTDMDD*IPHCAK
Trigger: TTTAGCACAATGTGGAATGCAGTCATCCATGTCAGT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATGTTTGCTGGGTCTCTaGTCTTCCACTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKCLLGL*SSTDMD
Trigger: ATCCATGTCAGTGGAAGAGCAGAGACCCAGCAAACA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACAGTTAACAGCTGTTTaGTGGGTCTCTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKQLTAV*WVSALP
Trigger: TGGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGCATCATGGCTCAAGTaGACATTTGTGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPASWLK*TFVLGI
Trigger: AATTCCTAACACAAATGTGCACTTGAGCCATGATGC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATGTTATCCATGCAACTaGTGGGCTGAGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLCYPCN*WAEWNC
Trigger: ACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATAAACTTCTCCATTTaGGCTGTGTGGGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKINFSI*AVWARS
Trigger: GCTTCTCGCCCACACAGCGCAAATGGAGAAGTTTAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTACATTTGTCCAGACTTaGAACTGTATACATACATGC +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCTFVQT*NCIHTC
Trigger: GCATGTATGTATACAGTTGCAAGTCTGGACAAATGT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTATGTGTATTGAGAACTaGACCATTACTTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCMCIEN*TITLTG
Trigger: ACCTGTCAAAGTAATGGTCCAGTTCTCAATACACAT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGAAGTAATGCTAACTaGCTACAAGCAACACTAGGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPRSNAN*LQATLG
Trigger: ACCTAGTGTTGCTTGTAGCCAGTTAGCATTACTTCT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGAATACTGCTGCAAATaGGCTTCGCTTGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLEYCCK*ASLDRS
Trigger: ACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTGCAAGACAAGTCTATaGGAACACAGTTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWCKTSL*EHSWNK
Trigger: CTTATTCCAACTGTGTTCCCATAGACTTGTCTTGCA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGTACTGCAGACATATaGTGGGGAATTCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPSTADI*WGIPFD
Trigger: ATCAAATGGAATTCCCCACCATATGTCTGCAGTACT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGGCTGGTTTCTCTCCTaGTGGGTCTTTGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLGWFLS*WVFAFC
Trigger: ACAAAAAGCAAAGACCCACCAGGAGAGAAACCAGCC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATGTGCACCTTCATTTTaGGCTGGTTTCTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKCAPSF*AGFSPG
Trigger: ACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGCACTCTTAGCATCATaGCTCAAGTGCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLALLAS*LKCTFV
Trigger: CACAAATGTGCACTTGAGCCATGATGCTAAGAGTGC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAGCCATACCCAAGAATaGGGCACTCTTAGCATCATG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSHTQE*GTLSIM
Trigger: CATGATGCTAAGAGTGCCCCATTCTTGGGTATGGCT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTTAGCAGACCATTCTTaGAGAAAGAAAAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCLADHS*RKKNPE
Trigger: CTCAGGATTTTTCTTTCTCCAAGAATGGTCTGCTAA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTGCTGGGCTGAGTaGAACTGTACATCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLNCWAE*NCTSVH
Trigger: ATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATATCCATGCAACTGCTaGGCTGAGTGGAACTGTACA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLYPCNC*AEWNCT
Trigger: TGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTTTCTCACTGGGCATaGAACACCCATTCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLSHWA*NTHSKA
Trigger: GGCTTTTGAATGGGTGTTCCATGCCCAGTGAGAAAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTATTGGGTTGGTTTTaGTCAATCTTGGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVLGWF*SILESL
Trigger: AAGACTCTCCAAGATTGACCAAAACCAACCCAATAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATCCATTTGCGCTGTGTaGGCGAGAAGCATTATTTCC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSICAV*ARSIIS
Trigger: GGAAATAATGCTTCTCGCCCACACAGCGCAAATGGA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGTGGGACAGACACATTaGGAACCACAAAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKVGQTH*EPQNLF
Trigger: GAAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCAC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAGCATGCCAGACCCCTaGTATGTATGTGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLSMPDP*YVCVLR
Trigger: TCTCAATACACATACATATCAGGGGTCTGGCATGCT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAGCATGCCAGACCCCTaGTATGTATGTGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSMPDP*YVCVLR
Trigger: TCTCAATACACATACATATCAGGGGTCTGGCATGCT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTAGAGCTGAATGACTaGAGCAAAGAGGCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLELND*SKEASN
Trigger: ATTACTGGCCTCTTTGCTTCAGTCATTCAGCTCTAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAACAACGGTTCACTCATaGCCTTTGTTCCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLTTVHS*PLFHFV
Trigger: GACAAAGTGGAACAAAGGTCATGAGTGAACCGTTGT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTTTCACTTGCTGCTTaGTTTGCATTTTGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLSLAA*FAFCVF
Trigger: AAAAACGCAAAATGCAAATCAAGCAGCAAGTGAAAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAACCATTAAGATGGCTTaGCATTCCTTTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLTIKMA*HSFWEL
Trigger: CAGCTCCCAAAAGGAATGTCAAGCCATCTTAATGGT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAATACCCATTGGATTTTaGAACACTGTAGCACTACTT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPIPIGF*NTVALL
Trigger: AAGTAGTGCTACAGTGTTTCAAAATCCAATGGGTAT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTTTGTAAGGTCCATTaGGTGGTTAGATGCAGTATT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWFCKVH*VVRCSI
Trigger: AATACTGCATCTAACCACTCAATGGACCTTACAAAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTTTGTAAGGTCCATTaGGTGGTTAGATGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPFCKVH*VVRCSI
Trigger: AATACTGCATCTAACCACTCAATGGACCTTACAAAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTCAGGACCTGTTGGTTaGCTACTAAATGCTTTATTT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSGPVG*LLNALF
Trigger: AAATAAAGCATTTAGTAGTCAACCAACAGGTCCTGA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGTACCACAGGAATGGTaGGAATTAACTTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWVPQEW*ELTFTR
Trigger: TCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTAC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTGAGATGCTGCCTATaGATCTGCATTTTAAAACAA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLRCCL*ICILKQ
Trigger: TTGTTTTAAAATGCAGATTCATAGGCAGCATCTCAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGCCTTCACTTCTCCATaGTGTTGCATAATACCCACT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLAFTSP*CCIIPT
Trigger: AGTGGGTATTATGCAACATCATGGAGAAGTGAAGGC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAACTGTCATGTTAGGATaGACATCTGATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPTVMLG*TSDLIC
Trigger: ACAAATCAGATCAGATGTTCATCCTAACATGACAGT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATCCTTCAGTCAAGTGTaGATCTTCTGGCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSFSQV*IFWLCF
Trigger: GAAACACAGCCAGAAGATGCACACTTGACTGAAGGA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318948.7
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAACAATAGAATCCTGGTaGACATCAGAGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLTIESW*TSEPSS
Trigger: AGAGCTTGGCTCTGATGTGCACCAGGATTCTATTGT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATTCTGGCCATTTTCTTaGAATCTGGCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKFWPFS*NLAIAA
Trigger: TGCTGCTATGGCCAGATTGCAAGAAAATGGCCAGAA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTCTGGCCATTTTCTTaGAATCTGGCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLFWPFS*NLAIAA
Trigger: TGCTGCTATGGCCAGATTGCAAGAAAATGGCCAGAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTGTTCACAAGGGCTTaGTTTCTATTCACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVFTRA*FLFTLK
Trigger: CTTTAAAGTGAATAGAAACCAAGCCCTTGTGAACAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGTGTTCACAAGGGCTTaGTTTCTATTCACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWVFTRA*FLFTLK
Trigger: CTTTAAAGTGAATAGAAACCAAGCCCTTGTGAACAC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACATTACTTTGACAGGTaGGAAATGCACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLHYFDR*EMHCQK
Trigger: TTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGATGTGTATTGAGAACTaGACCATTACTTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWMCIEN*TITLTG
Trigger: ACCTGTCAAAGTAATGGTCCAGTTCTCAATACACAT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGAATACTGCTGCAAATaGGCTTCGCTTGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLEYCCK*ASLDRS
Trigger: ACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGGCTTAGGTATAGTCTaGCTTTTAAGAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCGLGIV*LLRRCK
Trigger: TTTACATCTTCTTAAAAGCCAGACTATACCTAAGCC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTTGATATCTACATCTaGGACTTTTGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPFDIYI*DFWIPS
Trigger: ACTTGGGATCCAAAAGTCCCAGATGTAGATATCAAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGTAAGGTCCATTGAGTaGTTAGATGCAGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPVRSIE*LDAVFV
Trigger: AACAAATACTGCATCTAACCACTCAATGGACCTTAC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATGGTTTCTCTCCTGGTaGGTCTTTGCTTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLWFLSW*VFAFCK
Trigger: CTTACAAAAAGCAAAGACCCACCAGGAGAGAAACCA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGCTCTTCCACTGACATaGATGACTGCATTCCACATT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLALPLT*MTAFHI
Trigger: AATGTGGAATGCAGTCATCCATGTCAGTGGAAGAGC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGCACTCTTAGCATCATaGCTCAAGTGCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLALLAS*LKCTFV
Trigger: CACAAATGTGCACTTGAGCCATGATGCTAAGAGTGC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTAGCAGACCATTCTTaGAGAAAGAAAAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLADHS*RKKNPE
Trigger: CTCAGGATTTTTCTTTCTCCAAGAATGGTCTGCTAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGGTTTTGGTCAATCTTaGAGAGTCTTTTTCATACTC +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPGFGQS*RVFFIL
Trigger: GAGTATGAAAAAGACTCTCCAAGATTGACCAAAACC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGTTTCCAAACCATCCTaGAATCACCTGAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLVSKPS*NHLSLV
Trigger: TACCAAACTCAGGTGATTCCAGGATGGTTTGGAAAC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGGTCATTTGCTAACCTaGTTCACAATTAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCGHLLT*FTIKNK
Trigger: TTTGTTCTTAATTGTGAACCAGGTTAGCAAATGACC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACCAAGCTCTTCTCCATaGGTCATGTTCAATAGAAGT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLPSSSP*VMFNRS
Trigger: ACTTCTATTGAACATGACTCATGGAGAAGAGCTTGG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACCAAGCTCTTCTCCATaGGTCATGTTCAATAGAAGT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKPSSSP*VMFNRS
Trigger: ACTTCTATTGAACATGACTCATGGAGAAGAGCTTGG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTAGCAAGGATTGAGTaGAGTTATCCAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLARIE*SYPGKQ
Trigger: CTGTTTCCCTGGATAACTTCACTCAATCCTTGCTAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATTAGCAAGGATTGAGTaGAGTTATCCAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLARIE*SYPGKQ
Trigger: CTGTTTCCCTGGATAACTTCACTCAATCCTTGCTAA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACTCTCTGAGTGTTCCTaGGTACTTTCATCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLSECS*VLSSLK
Trigger: CTTAAGAGATGAAAGTACTCAGGAACACTCAGAGAG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTGTTCCCCATTAAATaGAAATATCAGTGTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLFPIK*KYQCSS
Trigger: AGACGAACACTGATATTTGCATTTAATGGGGAACAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318948.7
ENST00000400202.5
CDS-3UTR GCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGTTTTCTGTGGTGAGTaGGATGTAACTTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWVFCGE*DVTLIK
Trigger: CTTTATTAAAGTTACATCGCACTCACCACAGAAAAC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATTGACAGGTGGGAAATaGACTGCCAGAAATGTTAAA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLLTGGK*TARNVK
Trigger: TTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATTTCAGTTCGGTGTTTaGAAGACAAGTCTATGGGAA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLFQFGV*KTSLWE
Trigger: TTCCCATAGACTTGTCTTGCAAACACCGAACTGAAA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTTCAGACTGAGTACTaGAGACATATGGTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLFQTEY*RHMVGN
Trigger: ATTCCCCACCATATGTCTGCAGTACTCAGTCTGAAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAACTGACATGGATGACTaGATTCCACATTGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLTDMDD*IPHCAK
Trigger: TTTAGCACAATGTGGAATGCAGTCATCCATGTCAGT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGCATCATGGCTCAAGTaGACATTTGTGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLASWLK*TFVLGI
Trigger: AATTCCTAACACAAATGTGCACTTGAGCCATGATGC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGGCACTGTGATTGTTTaGAGCATCAACAATGTTGTT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLGTVIV*SINNVV
Trigger: AACAACATTGTTGATGCTGCAAACAATCACAGTGCC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGAGAGCATGTTAAGATaGAGATGGAAGATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKESMLR*RWKIPG
Trigger: ACCTGGAATCTTCCATCTGCATCTTAACATGCTCTC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACATTACTTTGACAGGTaGGAAATGCACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKHYFDR*EMHCQK
Trigger: TTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAGAAGTAATGCTAACTaGCTACAAGCAACACTAGGT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLRSNAN*LQATLG
Trigger: ACCTAGTGTTGCTTGTAGCCAGTTAGCATTACTTCT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGGCTTAGGTATAGTCTaGCTTTTAAGAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWGLGIV*LLRRCK
Trigger: TTTACATCTTCTTAAAAGCCAGACTATACCTAAGCC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATGCAAGACAAGTCTATaGGAACACAGTTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLCKTSL*EHSWNK
Trigger: CTTATTCCAACTGTGTTCCCATAGACTTGTCTTGCA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAGAAGTGTTACTTTCTaGTGTGAGTTTAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWRSVTF*CEFSLE
Trigger: TTCTAAGCTAAACTCACACCAGAAAGTAACACTTCT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGAAGTGTTACTTTCTaGTGTGAGTTTAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPRSVTF*CEFSLE
Trigger: TTCTAAGCTAAACTCACACCAGAAAGTAACACTTCT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATGGTTTCTCTCCTGGTaGGTCTTTGCTTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKWFLSW*VFAFCK
Trigger: CTTACAAAAAGCAAAGACCCACCAGGAGAGAAACCA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGTATTGGGTTGGTTTTaGTCAATCTTGGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLVLGWF*SILESL
Trigger: AAGACTCTCCAAGATTGACCAAAACCAACCCAATAC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAATATAGTATTGGGTTaGTTTTGGTCAATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPNIVLG*FWSILE
Trigger: CTCCAAGATTGACCAAAACCAACCCAATACTATATT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGTTTCCAAACCATCCTaGAATCACCTGAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLVSKPS*NHLSLV
Trigger: TACCAAACTCAGGTGATTCCAGGATGGTTTGGAAAC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACGTCATGTCCAGAAATaGAATACTGTCATGTTAGGA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLRHVQK*NTVMLG
Trigger: TCCTAACATGACAGTATTCCATTTCTGGACATGACG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGATCGCATCAAATTTaGTTGTGTAAACACCAGAAT +
Preference number: 4 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPRSHQI*LCKHQN
Trigger: ATTCTGGTGTTTACACAACCAAATTTGATGCGATCT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAATGGTTTTCTGTGGTaGGTGCGATGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLNGFLW*VRCNFN
Trigger: ATTAAAGTTACATCGCACTCACCACAGAAAACCATT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACTTTCACTTGCTGCTTaGTTTGCATTTTGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLLSLAA*FAFCVF
Trigger: AAAAACGCAAAATGCAAATCAAGCAGCAAGTGAAAG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAGGTTGGTCAGATTCTaGTTTTTCAGTTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKRLVRF*FFSSVF
Trigger: AAACACCGAACTGAAAAATCAGAATCTGACCAACCT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAGGTTGGTCAGATTCTaGTTTTTCAGTTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLRLVRF*FFSSVF
Trigger: AAACACCGAACTGAAAAATCAGAATCTGACCAACCT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAGAAAAATCCTGAGGTaGAACAGGCTCCGATTTAAA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLRKILR*NRLRFK
Trigger: TTTAAATCGGAGCCTGTTTCACCTCAGGATTTTTCT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATACTACACCTGGGTATaGAAATGTCCTGTTATCCAT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKYYTWV*KCPVIH
Trigger: ATGGATAACAGGACATTTTCATACCCAGGTGTAGTA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGTACCACAGGAATGGTaGGAATTAACTTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLVPQEW*ELTFTR
Trigger: TCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTAC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACTGAGATGCTGCCTATaGATCTGCATTTTAAAACAA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLLRCCL*ICILKQ
Trigger: TTGTTTTAAAATGCAGATTCATAGGCAGCATCTCAG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATCACAGATTTTCCTaGGATGTTGAGCCAGATATG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLNHRFS*DVEPDM
Trigger: CATATCTGGCTCAACATCTCAGGAAAATCTGTGATT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAAAGATCCAATGGAGTaGTTGTGTACAATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLKDPME*LCTILS
Trigger: TGACAGAATTGTACACAATCACTCCATTGGATCTTT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAACTGTCATGTTAGGATaGACATCTGATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLTVMLG*TSDLIC
Trigger: ACAAATCAGATCAGATGTTCATCCTAACATGACAGT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACAAGCTCTGAGCCTCTaGTTTCTGAGAAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKQALSL*FLRKKI
Trigger: AATTTTCTTTCTCAGAAAGCAGAGGCTCAGAGCTTG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318948.7
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATACTTTCCTCAAAAATaGTTCCTCTCTCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLYFPQK*FLSHCD
Trigger: GTCACAGTGAGAGAGGAAGCATTTTTGAGGAAAGTA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGCATCATGGCTCAAGTaGACATTTGTGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKASWLK*TFVLGI
Trigger: AATTCCTAACACAAATGTGCACTTGAGCCATGATGC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGGCACTGTGATTGTTTaGAGCATCAACAATGTTGTT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKGTVIV*SINNVV
Trigger: AACAACATTGTTGATGCTGCAAACAATCACAGTGCC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGAATCTGTGGATGTATaGCCTTTCTCACTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLESVDV*PFSLFF
Trigger: AAAGAACAGTGAGAAAGGGCATACATCCACAGATTC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAACATTTGTCCAGACTTaGAACTGTATACATACATGC +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLTFVQT*NCIHTC
Trigger: GCATGTATGTATACAGTTGCAAGTCTGGACAAATGT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATGCAAGACAAGTCTATaGGAACACAGTTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKCKTSL*EHSWNK
Trigger: CTTATTCCAACTGTGTTCCCATAGACTTGTCTTGCA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATTTGATATCTACATCTaGGACTTTTGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLFDIYI*DFWIPS
Trigger: ACTTGGGATCCAAAAGTCCCAGATGTAGATATCAAA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAGTACTGCAGACATATaGTGGGGAATTCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSTADI*WGIPFD
Trigger: ATCAAATGGAATTCCCCACCATATGTCTGCAGTACT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGTAAGGTCCATTGAGTaGTTAGATGCAGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLVRSIE*LDAVFV
Trigger: AACAAATACTGCATCTAACCACTCAATGGACCTTAC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATGGTTCAGGACCTGTTaGTTGACTACTAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLWFRTC*LTTKCF
Trigger: AAAGCATTTAGTAGTCAACCAACAGGTCCTGAACCA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGTATTGGGTTGGTTTTaGTCAATCTTGGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKVLGWF*SILESL
Trigger: AAGACTCTCCAAGATTGACCAAAACCAACCCAATAC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACAAAGTGAATCTGTaGATGTATGCCCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLNKVNL*MYALSH
Trigger: GTGAGAAAGGGCATACATCCACAGATTCACTTTGTT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACGTCATGTCCAGAAATaGAATACTGTCATGTTAGGA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKRHVQK*NTVMLG
Trigger: TCCTAACATGACAGTATTCCATTTCTGGACATGACG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAATGGTTTTCTGTGGTaGGTGCGATGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKNGFLW*VRCNFN
Trigger: ATTAAAGTTACATCGCACTCACCACAGAAAACCATT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATGGTTTTCTGTGGTaGGTGCGATGTAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLNGFLW*VRCNFN
Trigger: ATTAAAGTTACATCGCACTCACCACAGAAAACCATT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAATACCCATTGGATTTTaGAACACTGTAGCACTACTT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLIPIGF*NTVALL
Trigger: AAGTAGTGCTACAGTGTTTCAAAATCCAATGGGTAT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATTTTGTAAGGTCCATTaGGTGGTTAGATGCAGTATT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKFCKVH*VVRCSI
Trigger: AATACTGCATCTAACCACTCAATGGACCTTACAAAA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGTACCACAGGAATGGTaGGAATTAACTTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKVPQEW*ELTFTR
Trigger: TCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTAC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR TCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAGATCCAATGGAGTaGTTGTGTACAATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLKDPME*LCTILS
Trigger: TGACAGAATTGTACACAATCACTCCATTGGATCTTT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGTGTTCACAAGGGCTTaGTTTCTATTCACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKVFTRA*FLFTLK
Trigger: CTTTAAAGTGAATAGAAACCAAGCCCTTGTGAACAC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATGTGTATTGAGAACTaGACCATTACTTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKMCIEN*TITLTG
Trigger: ACCTGTCAAAGTAATGGTCCAGTTCTCAATACACAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGGCTTAGGTATAGTCTaGCTTTTAAGAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLGLGIV*LLRRCK
Trigger: TTTACATCTTCTTAAAAGCCAGACTATACCTAAGCC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATTTGATATCTACATCTaGGACTTTTGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKFDIYI*DFWIPS
Trigger: ACTTGGGATCCAAAAGTCCCAGATGTAGATATCAAA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATTAGCAGACCATTCTTaGAGAAAGAAAAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLADHS*RKKNPE
Trigger: CTCAGGATTTTTCTTTCTCCAAGAATGGTCTGCTAA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGGTTTTGGTCAATCTTaGAGAGTCTTTTTCATACTC +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKGFGQS*RVFFIL
Trigger: GAGTATGAAAAAGACTCTCCAAGATTGACCAAAACC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGGTTTTGGTCAATCTTaGAGAGTCTTTTTCATACTC +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLGFGQS*RVFFIL
Trigger: GAGTATGAAAAAGACTCTCCAAGATTGACCAAAACC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAATATAGTATTGGGTTaGTTTTGGTCAATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLNIVLG*FWSILE
Trigger: CTCCAAGATTGACCAAAACCAACCCAATACTATATT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAGATCGCATCAAATTTaGTTGTGTAAACACCAGAAT +
Preference number: 4 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLRSHQI*LCKHQN
Trigger: ATTCTGGTGTTTACACAACCAAATTTGATGCGATCT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR CAA 72 bp GTGATTGTGTACAATTCTGTCACGTATATGTGCCCTTaGTACTTTTTATTTAGTCAATCTGAGTTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: VIVYNSVTYMCP*YFLFSQSEFSA
Trigger: GGCACTAAACTCAGATTGACTAAATAAAAAGTACAAAGGGCACATATACGTGACAGAATTGTACACAATCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
3UTR CAA 72 bp GTCAGAATAAGCCTATGCCTTCACTTCTCCATGATGTaGCATAATACCCACTCCTATTACTGTATAATATTT +
Preference number: 4 (lower is better)
Translates to: VRISLCLHFSMM*HNTHSYYCIIF
Trigger: AAATATTATACAGTAATAGGAGTGGGTATTATGCAACATCATGGAGAAGTGAAGGCATAGGCTTATTCTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR GCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTGTTCCCCATTAAATaGAAATATCAGTGTTCGTCT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLFPIK*KYQCSS
Trigger: AGACGAACACTGATATTTGCATTTAATGGGGAACAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318948.7
ENST00000400202.5
CDS-3UTR GCA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGTTTTCTGTGGTGAGTaGGATGTAACTTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKVFCGE*DVTLIK
Trigger: CTTTATTAAAGTTACATCGCACTCACCACAGAAAAC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATATAGTATTGGGTTaGTTTTGGTCAATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLNIVLG*FWSILE
Trigger: CTCCAAGATTGACCAAAACCAACCCAATACTATATT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACTGGTGAATGAATTGTaGATTGTACAAACTGAACAT +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLVNEL*IVQTEH
Trigger: ATGTTCAGTTTGTACAATCCACAATTCATTCACCAG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CCA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGGTCATTTGCTAACCTaGTTCACAATTAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: ICINKVNLWMYALSHCSLGHLLT*FTIKNK
Trigger: TTTGTTCTTAATTGTGAACCAGGTTAGCAAATGACC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp CGGCTCCGTCAGGCTCGGTCCGCGAAGGCGCCTGCCGCCCCGTCCTaGCCCGGCGCCCCGGCGAGCTCTTCCCTCCGACCAGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: RLRQARSAKAPAAPS*PGAPASSSLRPAAL
Trigger: GAGCGCCGCTGGTCGGAGGGAAGAGCTCGCCGGGGCGCCGGGCCAGGACGGGGCGGCAGGCGCCTTCGCGGACCGAGCCTGACGGAGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp GACGTAGGACCCAGGAGCAGGGTTAATCCTCGGCTGCTTTGTCACTaGGAAGTCTCCAGCGGAGTCTGTCAGCCAATCTGCATCATCCCC +
Preference number: 5 (lower is better)
Translates to: DVGPRSRVNPRLLCH*EVSSGVCQPICIIP
Trigger: GGGGATGATGCAGATTGGCTGACAGACTCCGCTGGAGACTTCGCAGTGACAAAGCAGCCGAGGATTAACCCTGCTCCTGGGTCCTACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637630.1
ENST00000637963.1
CDS TCA 90 bp CCAGCGGAGTCTGTCAGCCAATCTGCATCATCCCCGGGAAGGATCTaGCCCAACAAGACAAGGGAAAAGGAGCAGGGCTGCTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: PAESVSQSASSPGRI*PNKTREKEQGCYFF
Trigger: GAAGAAGTAGCAGCCCTGCTCCTTTTCCCTTGTCTTGTTGGGTCAGATCCTTCCCGGGGATGATGCAGATTGGCTGACAGACTCCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637630.1
ENST00000637963.1
CDS GCA 90 bp CTGCTTTGTCACTGCGAAGTCTCCAGCGGAGTCTGTCAGCCAATCTaGATCATCCCCGGGAAGGATCTGACCCAACAAGACAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: LLCHCEVSSGVCQPI*IIPGKDLTQQDKGK
Trigger: TTTTCCCTTGTCTTGTTGGGTCAGATCCTTCCCGGGGATGATGCAGATTGGCTGACAGACTCCGCTGGAGACTTCGCAGTGACAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637630.1
ENST00000637963.1
CDS GCA 90 bp TCCGATTTAAAGTCTTCGGACACTGGTAAGGCAGGTGCGCTTCTCTaGACAGCAGGAGCCATACCCAAGAATGGGGCACTCTTAGCATCA +
Preference number: 5 (lower is better)
Translates to: SDLKSSDTGKAGALL*TAGAIPKNGALLAS
Trigger: TGATGCTAAGAGTGCCCCATTCTTGGGTATGGCTCCTGCTGTGCAGAGAAGCGCACCTGCCTTACCAGTGTCCGAAGACTTTAAATCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp GGGCATGGAACACCCATTCAAAAGCCCAGATTCTGGTCTAGACCCTaGACAGCCCAAGTGCTCAGGGAAAGTAGGACTCACAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: GHGTPIQKPRFWSRP*TAQVLRESRTHRSF
Trigger: AAAACTCCTGTGAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAATCTGGGCTTTTGAATGGGTGTTCCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp CCATTCAAAAGCCCAGATTCTGGTCTAGACCCTGCACAGCCCAAGTaGTCAGGGAAAGTAGGACTCACAGGAGTTTTTACTACACCTGGG +
Preference number: 5 (lower is better)
Translates to: PFKSPDSGLDPAQPK*SGKVGLTGVFTTPG
Trigger: CCCAGGTGTAGTAAAAACTCCTGTGAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAATCTGGGCTTTTGAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp GAATACTGCTGCAAATGGGCTTCGCTTGACAGAAGTAATGCTAACTaGCTACAAGCAACACTAGGTTTAGGTGAGGTGGCAGGACTAGCC +
Preference number: 5 (lower is better)
Translates to: EYCCKWASLDRSNAN*LQATLGLGEVAGLA
Trigger: GGCTAGTCCTGCCACCTCACCTAAACCTAGTGTTGCTTGTAGCCAGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp AGCTTACTGGCACTAAACGTTGCAGAGTTCTGTGCACCTTCATTTTaGGCTGGTTTCTCTCCTGGTGGGTCTTTGCTTTTTGTAAGGTCC +
Preference number: 5 (lower is better)
Translates to: SLLALNVAEFCAPSF*AGFSPGGSLLFVRS
Trigger: GGACCTTACAAAAAGCAAAGACCCACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACAGAACTCTGCAACGTTTAGTGCCAGTAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTACTGAGGGCATATCCTaGCTCCTTGAGGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCTEGIS*LLEALP
Trigger: AGGCAGAGCCTCAAGGAGCAAGGATATGCCCTCAGT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp ATTTGTTGTGACAGAGCAACAGTCTGCAGCCTAGAGCTGAATGACTaGAGCAAAGAGGCCAGTAATGTGCTATCCTGTTTGCCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: ICCDRATVCSLELND*SKEASNVLSCLPLG
Trigger: GCCTAAAGGCAAACAGGATAGCACATTACTGGCCTCTTTGCTTCAGTCATTCAGCTCTAGGCTGCAGACTGTTGCTCTGTCACAACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp GCTTTTGCTCTCTCTGGCCCAACTCCTGTGTTCACTTTCGCTGGCTaGGCCATGACCAGCAGGATATTTAAATTCAAGATCATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: AFALSGPTPVFTFAG*AMTSRIFKFKIISA
Trigger: AGCAGAAATGATCTTGAATTTAAATATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACAGGAGTTGGGCCAGAGAGAGCAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp CTCAGGGAAAGTAGGACTCACAGGAGTTTTTACTACACCTGGGTATaGAAATGTCCTGTTATCCATGCAACTGCTGGGCTGAGTGGAACT +
Preference number: 5 (lower is better)
Translates to: LRESRTHRSFYYTWV*KCPVIHATAGLSGT
Trigger: AGTTCCACTCAGCCCAGCAGTTGCATGGATAACAGGACATTTTCATACCCAGGTGTAGTAAAAACTCCTGTGAGTCCTACTTTCCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp GAGGTGCAGCATGCCAGACCCCTGATATGTATGTGTATTGAGAACTaGACCATTACTTTGACAGGTGGGAAATGCACTGCCAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: EVQHARPLICMCIEN*TITLTGGKCTARNV
Trigger: AACATTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACACATACATATCAGGGGTCTGGCATGCTGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTCACTCTTCCCTTTGTaGGGGTTCCCCAGGAGCAAC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSLFPL*GFPRSN
Trigger: GTTGCTCCTGGGGAACCCCAACAAAGGGAAGAGTGA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp TTGCAACAGCCTGTAATCTTGCAGCACATGACAACGGTTCACTCATaGCCTTTGTTCCACTTTGTCCAACATGATGAGGAGACTCTGCAA +
Preference number: 5 (lower is better)
Translates to: LQQPVILQHMTTVHS*PLFHFVQHDEETLQ
Trigger: TTGCAGAGTCTCCTCATCATGTTGGACAAAGTGGAACAAAGGTCATGAGTGAACCGTTGTCATGTGCTGCAAGATTACAGGCTGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp GGAGCCATACCCAAGAATGGGGCACTCTTAGCATCATGGCTCAAGTaGACATTTGTGTTAGGAATTTGTAAGTCATCACAAGGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: GAIPKNGALLASWLK*TFVLGICKSSQGSD
Trigger: ATCTGAGCCTTGTGATGACTTACAAATTCCTAACACAAATGTGCACTTGAGCCATGATGCTAAGAGTGCCCCATTCTTGGGTATGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp TGCACAGCAGGAGCCATACCCAAGAATGGGGCACTCTTAGCATCATaGCTCAAGTGCACATTTGTGTTAGGAATTTGTAAGTCATCACAA +
Preference number: 5 (lower is better)
Translates to: CTAGAIPKNGALLAS*LKCTFVLGICKSSQ
Trigger: TTGTGATGACTTACAAATTCCTAACACAAATGTGCACTTGAGCCATGATGCTAAGAGTGCCCCATTCTTGGGTATGGCTCCTGCTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp GTATCATGTAACATGCCTCTTCTTATTAACAGGACCTGGGCTCTGTaGGACTGCTCTGAATCTGTCCATGCAAACCAACTTTTGGAACTC +
Preference number: 5 (lower is better)
Translates to: VSCNMPLLINRTWAL*DCSESVHANQLLEL
Trigger: GAGTTCCAAAAGTTGGTTTGCATGGACAGATTCAGAGCAGTCCCACAGAGCCCAGGTCCTGTTAATAAGAAGAGGCATGTTACATGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637630.1
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTGCCCAGCAGACTTTTaGTCAACGGCAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCCPADF*STAVPD
Trigger: ATCAGGTACTGCCGTTGACAAAAAGTCTGCTGGGCA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGGCTTGACATTCCTTTaGGGAGCTGGTAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCGLTFL*GAGNCQ
Trigger: TTGGCAGTTACCAGCTCCCAAAAGGAATGTCAAGCC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTGTGCACCTTCATTTaGGGCTGGTTTCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLCTFI*GWFLSW
Trigger: CCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACCAGTTAACAGCTGTTaGCTGGGTCTCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPPVNSC*LGLCSS
Trigger: GGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTGG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp CTCTCTCTGGCCCAACTCCTGTGTTCACTTTCGCTGGCTGAGCCATaGCCAGCAGGATATTTAAATTCAAGATCATTTCTGCTAAATTTC +
Preference number: 5 (lower is better)
Translates to: LSLAQLLCSLSLAEP*PAGYLNSRSFLLNF
Trigger: GAAATTTAGCAGAAATGATCTTGAATTTAAATATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACAGGAGTTGGGCCAGAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp ATCGGTTTATCTGTGTTTCCAGTTAACAGCTGTTTGCTGGGTCTCTaGTCTTCCACTGACATGGATGACTGCATTCCACATTGTGCTAAA +
Preference number: 5 (lower is better)
Translates to: IGLSVFPVNSCLLGL*SSTDMDDCIPHCAK
Trigger: TTTAGCACAATGTGGAATGCAGTCATCCATGTCAGTGGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTGGAAACACAGATAAACCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAACAGTCTGGCTTTTTaGAGGTGCAGCATGCCAGAC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWNSLAF*RCSMPD
Trigger: GTCTGGCATGCTGCACCTCAAAAAAGCCAGACTGTT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCAACAGCCTGTAATCTaGCAGCACATGACAACGGTT +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCQQPVI*QHMTTV
Trigger: AACCGTTGTCATGTGCTGCAAGATTACAGGCTGTTG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACTTCTGGCCATTTTCTaGCAATCTGGCCATAGCAGC +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPLLAIF*QSGHSS
Trigger: GCTGCTATGGCCAGATTGCAAGAAAATGGCCAGAAG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGGCTTGACATTCCTTTaGGGAGCTGGTAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPGLTFL*GAGNCQ
Trigger: TTGGCAGTTACCAGCTCCCAAAAGGAATGTCAAGCC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGGAAGTAACTCTTCTTaGGCTGTGACCTGTGAGACA +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCGSNSS*AVTCET
Trigger: TGTCTCACAGGTCACAGCCAAAGAAGAGTTACTTCC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCATAAACTTCTCCATTaGCGCTGTGTGGGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWHKLLH*RCVGEK
Trigger: CTTCTCGCCCACACAGCGCAAATGGAGAAGTTTATG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACATAAACTTCTCCATTaGCGCTGTGTGGGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPHKLLH*RCVGEK
Trigger: CTTCTCGCCCACACAGCGCAAATGGAGAAGTTTATG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGGTGGGACAGACACATaGGGAACCACAAAACCTCTT +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPGGTDT*GTTKPL
Trigger: AAGAGGTTTTGTGGTTCCCAATGTGTCTGTCCCACC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp CTTAGCAATCGACTTAGCAGACCATTCTTGGAGAAAGAAAAATCCTaGGGTGAAACAGGCTCCGATTTAAAGTCTTCGGACACTGGTAAG +
Preference number: 5 (lower is better)
Translates to: LSNRLSRPFLEKEKS*GETGSDLKSSDTGK
Trigger: CTTACCAGTGTCCGAAGACTTTAAATCGGAGCCTGTTTCACCTCAGGATTTTTCTTTCTCCAAGAATGGTCTGCTAAGTCGATTGCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp GCATTTTGCGTTTTTAAAGCGTGTTCTCGAGAATACTGCTGCAAATaGGCTTCGCTTGACAGAAGTAATGCTAACTGGCTACAAGCAACA +
Preference number: 5 (lower is better)
Translates to: AFCVFKACSREYCCK*ASLDRSNANWLQAT
Trigger: TGTTGCTTGTAGCCAGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTCTCGAGAACACGCTTTAAAAACGCAAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAATGTGCTATCCTGTTaGCCTTTAGGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCNVLSC*PLGTLS
Trigger: TGACAGTGTGCCTAAAGGCAAACAGGATAGCACATT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAACTGAGGGCATATCCTaGCTCCTTGAGGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLTEGIS*LLEALP
Trigger: AGGCAGAGCCTCAAGGAGCAAGGATATGCCCTCAGT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCAACAGCCTGTAATCTaGCAGCACATGACAACGGTT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWQQPVI*QHMTTV
Trigger: AACCGTTGTCATGTGCTGCAAGATTACAGGCTGTTG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACCAGTTAACAGCTGTTaGCTGGGTCTCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLPVNSC*LGLCSS
Trigger: GGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTGG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATCACTCTTCCCTTTGTaGGGGTTCCCCAGGAGCAAC +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSLFPL*GFPRSN
Trigger: GTTGCTCCTGGGGAACCCCAACAAAGGGAAGAGTGA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGAACATTAAAGCTTTaGCTCTCTCTGGCCCAACTC +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCRTLKL*LSLAQL
Trigger: GAGTTGGGCCAGAGAGAGCAAAAGCTTTAATGTTCT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATCCCTCCAAATGTCCTaGTCTTGTGTTTCTCGACTG +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPSLQMS*SCVSRL
Trigger: CAGTCGAGAAACACAAGACAAGGACATTTGGAGGGA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp CAAGGATTGAGTGAAGTTATCCAGGGAAACAGGTTGGTCAGATTCTaGTTTTTCAGTTCGGTGTTTGCAAGACAAGTCTATGGGAACACA +
Preference number: 5 (lower is better)
Translates to: QGLSEVIQGNRLVRF*FFSSVFARQVYGNT
Trigger: TGTGTTCCCATAGACTTGTCTTGCAAACACCGAACTGAAAAATCAGAATCTGACCAACCTGTTTCCCTGGATAACTTCACTCAATCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp CTACATCTGGGACTTTTGGATCCCAAGTGTTTAGCAAGGATTGAGTaGAGTTATCCAGGGAAACAGGTTGGTCAGATTCTGATTTTTCAG +
Preference number: 5 (lower is better)
Translates to: LHLGLLDPKCLARIE*SYPGKQVGQILIFQ
Trigger: CTGAAAAATCAGAATCTGACCAACCTGTTTCCCTGGATAACTTCACTCAATCCTTGCTAAACACTTGGGATCCAAAAGTCCCAGATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp TACTGGGGCTTTCTATCACAGAAGTCCTTGCATAATTTTGTGTATTaGACTTGCTCACATCATTGTGTACTCCCTGAGGGCTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: YWGFLSQKSLHNFVY*TCSHHCVLPEGWCF
Trigger: AAAACACCAGCCCTCAGGGAGTACACAATGATGTGAGCAAGTTCAATACACAAAATTATGCAAGGACTTCTGTGATAGAAAGCCCCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp AGGTCCATTGAGTGGTTAGATGCAGTATTTGTTAGCTTTTCAGACTaGGTACTGCAGACATATGGTGGGGAATTCCATTTGATGACCAGA +
Preference number: 5 (lower is better)
Translates to: RSIEWLDAVFVSFSD*VLQTYGGEFHLMTR
Trigger: TCTGGTCATCAAATGGAATTCCCCACCATATGTCTGCAGTACTCAGTCTGAAAAGCTAACAAATACTGCATCTAACCACTCAATGGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp TTACTACACCTGGGTATGAAAATGTCCTGTTATCCATGCAACTGCTaGGCTGAGTGGAACTGTACATCAGTCCATTTAAAGAAGAAATGC +
Preference number: 5 (lower is better)
Translates to: LLHLGMKMSCYPCNC*AEWNCTSVHLKKKC
Trigger: GCATTTCTTCTTTAAATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACAGGACATTTTCATACCCAGGTGTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAACAGTCTGGCTTTTTaGAGGTGCAGCATGCCAGAC +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLNSLAF*RCSMPD
Trigger: GTCTGGCATGCTGCACCTCAAAAAAGCCAGACTGTT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAATGTGCTATCCTGTTaGCCTTTAGGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWNVLSC*PLGTLS
Trigger: TGACAGTGTGCCTAAAGGCAAACAGGATAGCACATT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGACCTTTGTTCCACTTaGTCCAACATGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPDLCST*SNMMRR
Trigger: TCTCCTCATCATGTTGGACAAAGTGGAACAAAGGTC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGCAAATGGGCTTCGCTaGACAGAAGTAATGCTAACT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWANGLR*TEVMLT
Trigger: AGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACTTCTGGCCATTTTCTaGCAATCTGGCCATAGCAGC +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLLLAIF*QSGHSS
Trigger: GCTGCTATGGCCAGATTGCAAGAAAATGGCCAGAAG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGGCTTGACATTCCTTTaGGGAGCTGGTAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLGLTFL*GAGNCQ
Trigger: TTGGCAGTTACCAGCTCCCAAAAGGAATGTCAAGCC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTTGCTAGCCATCAGTTaGCTTGATGATGTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWLLAIS*LDDVLA
Trigger: GGCAAGAACATCATCAAGCAAACTGATGGCTAGCAA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTTTTCAGTTCGGTGTTaGCAAGACAAGTCTATGGGA +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCFSVRC*QDKSMG
Trigger: TCCCATAGACTTGTCTTGCAAACACCGAACTGAAAA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCTACATCTGGGACTTTaGGATCCCAAGTGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWLHLGL*DPKCLA
Trigger: TGCTAAACACTTGGGATCCAAAAGTCCCAGATGTAG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTCTCCTGGTGGGTCTTaGCTTTTTGTAAGGTCCATT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSPGGS*LFVRSI
Trigger: AATGGACCTTACAAAAAGCAAAGACCCACCAGGAGA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTGTGCACCTTCATTTaGGGCTGGTTTCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLCTFI*GWFLSW
Trigger: CCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACCAGTTAACAGCTGTTaGCTGGGTCTCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKPVNSC*LGLCSS
Trigger: GGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTGG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGGGCACTGTGATTGTTaGCAGCATCAACAATGTTGT +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPGHCDC*QHQQCC
Trigger: ACAACATTGTTGATGCTGCAAACAATCACAGTGCCC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAGAACATTAAAGCTTTaGCTCTCTCTGGCCCAACTC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWRTLKL*LSLAQL
Trigger: GAGTTGGGCCAGAGAGAGCAAAAGCTTTAATGTTCT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGTATTGGGTTGGTTTaGGTCAATCTTGGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSIGLV*VNLGES
Trigger: AGACTCTCCAAGATTGACCAAAACCAACCCAATACT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCCAAATGTCCTTGTCTaGTGTTTCTCGACTGGTAAC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWPNVLV*CFSTGN
Trigger: GTTACCAGTCGAGAAACACAAGACAAGGACATTTGG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTGGAATCACCTGAGTTaGGTAAGTGGCCCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWWNHLS*VSGPVF
Trigger: AAAAACAGGGCCACTTACCAAACTCAGGTGATTCCA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp AAAACAATAGAATCCTGGTGCACATCAGAGCCAAGCTCTTCTCCATaGGTCATGTTCAATAGAAGTGTTCACAAGGGCTTGGTTTCTATT +
Preference number: 5 (lower is better)
Translates to: KTIESWCTSEPSSSP*VMFNRSVHKGLVSI
Trigger: AATAGAAACCAAGCCCTTGTGAACACTTCTATTGAACATGACTCATGGAGAAGAGCTTGGCTCTGATGTGCACCAGGATTCTATTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
ENST00000411932.1
CDS TCA 90 bp GTTGTAGGTGTACTACTTTCCTCAAAAATGCTTCCTCTCTCACTGTaGCTGTGTCCATTCATTGGCTTAGGTATAGTCTGGCTTTTAAGA +
Preference number: 5 (lower is better)
Translates to: VVGVLLSSKMLPLSL*LCPFIGLGIVWLLR
Trigger: TCTTAAAAGCCAGACTATACCTAAGCCAATGAATGGACACAGTCACAGTGAGAGAGGAAGCATTTTTGAGGAAAGTAGTACACCTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp TGTATGTGTATTGAGAACTGGACCATTACTTTGACAGGTGGGAAATaGACTGCCAGAAATGTTAAAGTTCTGATCCTCTTCATTATGCCC +
Preference number: 5 (lower is better)
Translates to: CMCIENWTITLTGGK*TARNVKVLILFIMP
Trigger: GGGCATAATGAAGAGGATCAGAACTTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACACATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp CCAGGGAAACAGGTTGGTCAGATTCTGATTTTTCAGTTCGGTGTTTaGAAGACAAGTCTATGGGAACACAGTTGGAATAAGAACTTTCAT +
Preference number: 5 (lower is better)
Translates to: PGKQVGQILIFQFGV*KTSLWEHSWNKNFH
Trigger: ATGAAAGTTCTTATTCCAACTGTGTTCCCATAGACTTGTCTTGCAAACACCGAACTGAAAAATCAGAATCTGACCAACCTGTTTCCCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp TGGAGTAGTCCGATTTGTACTGGGGCTTTCTATCACAGAAGTCCTTaGATAATTTTGTGTATTGAACTTGCTCACATCATTGTGTACTCC +
Preference number: 5 (lower is better)
Translates to: WSSPICTGAFYHRSP*IILCIELAHIIVYS
Trigger: GGAGTACACAATGATGTGAGCAAGTTCAATACACAAAATTATGCAAGGACTTCTGTGATAGAAAGCCCCAGTACAAATCGGACTACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp AAATTTCAGCTCTTCCTGGTTAAGCAAGGACCCATACAGTACTTCTaGGGCACTGTGATTGTTTGCAGCATCAACAATGTTGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: KFQLFLVKQGPIQYF*GTVIVCSINNVVFH
Trigger: ATGAAAAACAACATTGTTGATGCTGCAAACAATCACAGTGCCCCAGAAGTACTGTATGGGTCCTTGCTTAACCAGGAAGAGCTGAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATGCCCAGCAGACTTTTaGTCAACGGCAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLCPADF*STAVPD
Trigger: ATCAGGTACTGCCGTTGACAAAAAGTCTGCTGGGCA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTCAGCAAGTCTTTCACTaGCTGCTTGATTTGCATTTT +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCQQVFH*LLDLHF
Trigger: AAAATGCAAATCAAGCAGCAAGTGAAAGACTTGCTG...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTTCTGGCCATTTTCTaGCAATCTGGCCATAGCAGC +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLLAIF*QSGHSS
Trigger: GCTGCTATGGCCAGATTGCAAGAAAATGGCCAGAAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATTTTCAGTTCGGTGTTaGCAAGACAAGTCTATGGGA +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPFSVRC*QDKSMG
Trigger: TCCCATAGACTTGTCTTGCAAACACCGAACTGAAAA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAGTATTGGGTTGGTTTaGGTCAATCTTGGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSIGLV*VNLGES
Trigger: AGACTCTCCAAGATTGACCAAAACCAACCCAATACT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAGTATTGGGTTGGTTTaGGTCAATCTTGGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPSIGLV*VNLGES
Trigger: AGACTCTCCAAGATTGACCAAAACCAACCCAATACT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGGAAGTAACTCTTCTTaGGCTGTGACCTGTGAGACA +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLGSNSS*AVTCET
Trigger: TGTCTCACAGGTCACAGCCAAAGAAGAGTTACTTCC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCACTTCTCCATGATGTaGCATAATACCCACTCCTAT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWHFSMM*HNTHSY
Trigger: ATAGGAGTGGGTATTATGCAACATCATGGAGAAGTG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 90 bp ATATCTACATCTGGGACTTTTGGATCCCAAGTGTTTAGCAAGGATTaGGTGAAGTTATCCAGGGAAACAGGTTGGTCAGATTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: ISTSGTFGSQVFSKD*VKLSRETGWSDSDF
Trigger: AAAATCAGAATCTGACCAACCTGTTTCCCTGGATAACTTCACTCAATCCTTGCTAAACACTTGGGATCCAAAAGTCCCAGATGTAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 90 bp TTTTTACTACACCTGGGTATGAAAATGTCCTGTTATCCATGCAACTaGTGGGCTGAGTGGAACTGTACATCAGTCCATTTAAAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: FLLHLGMKMSCYPCN*WAEWNCTSVHLKKK
Trigger: TTTCTTCTTTAAATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACAGGACATTTTCATACCCAGGTGTAGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAATGTGCTATCCTGTTaGCCTTTAGGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLNVLSC*PLGTLS
Trigger: TGACAGTGTGCCTAAAGGCAAACAGGATAGCACATT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAAGTTTTTAAGTGACTaGATGCAACACCATAGCACC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWKFLSD*MQHHST
Trigger: GGTGCTATGGTGTTGCATCAAGTCACTTAAAAACTT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAAAGTTTTTAAGTGACTaGATGCAACACCATAGCACC +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPKFLSD*MQHHST
Trigger: GGTGCTATGGTGTTGCATCAAGTCACTTAAAAACTT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGACCTTTGTTCCACTTaGTCCAACATGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLDLCST*SNMMRR
Trigger: TCTCCTCATCATGTTGGACAAAGTGGAACAAAGGTC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACAACAGCCTGTAATCTaGCAGCACATGACAACGGTT +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLQQPVI*QHMTTV
Trigger: AACCGTTGTCATGTGCTGCAAGATTACAGGCTGTTG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTTCTTTCACTTGCTGCTaGATTTGCATTTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSFTCC*ICILRF
Trigger: AAAACGCAAAATGCAAATCAAGCAGCAAGTGAAAGA...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGCAGCAAGTCTTTCACTaGCTGCTTGATTTGCATTTT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWQQVFH*LLDLHF
Trigger: AAAATGCAAATCAAGCAGCAAGTGAAAGACTTGCTG...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATTGCTAGCCATCAGTTaGCTTGATGATGTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLLLAIS*LDDVLA
Trigger: GGCAAGAACATCATCAAGCAAACTGATGGCTAGCAA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTAGTCCTTGCATAATTTaGTGTATTGAACTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCSPCII*CIELAH
Trigger: GTGAGCAAGTTCAATACACAAAATTATGCAAGGACT...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAATGGGAGACCCTGCTTaGCTTGATGTAAGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLMGDPA*LDVSKG
Trigger: ACCTTTACTTACATCAAGCAAAGCAGGGTCTCCCAT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGATGACCAGAGAGTGTaGAGAGAGATTGATGGGAGA +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKDDQRV*REIDGR
Trigger: TCTCCCATCAATCTCTCTCAACACTCTCTGGTCATC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGATGACCAGAGAGTGTaGAGAGAGATTGATGGGAGA +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLDDQRV*REIDGR
Trigger: TCTCCCATCAATCTCTCTCAACACTCTCTGGTCATC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAAGAACATTAAAGCTTTaGCTCTCTCTGGCCCAACTC +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLRTLKL*LSLAQL
Trigger: GAGTTGGGCCAGAGAGAGCAAAAGCTTTAATGTTCT...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp AGCATGTTAAGATGCAGATGGAAGATTCCAGGTCCACTTAGCAGAGATTCTTGTGCATGTAATATAGTATaGGGTTGGTTTTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: SMLRCRWKIPGPLSRDSCACNIV*GWFWSI
Trigger: GATTGACCAAAACCAACCCAATACTATATTACATGC...ACAAGAATCTCTGCTAAGTGGACCTGGAATCTTCCATCTGCATCTTAACATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACCAAATGTCCTTGTCTaGTGTTTCTCGACTGGTAAC +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLPNVLV*CFSTGN
Trigger: GTTACCAGTCGAGAAACACAAGACAAGGACATTTGG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATCCCTCCAAATGTCCTaGTCTTGTGTTTCTCGACTG +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSLQMS*SCVSRL
Trigger: CAGTCGAGAAACACAAGACAAGGACATTTGGAGGGA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGGAAGTAACTCTTCTTaGGCTGTGACCTGTGAGACA +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLGSNSS*AVTCET
Trigger: TGTCTCACAGGTCACAGCCAAAGAAGAGTTACTTCC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAATAGGCTACTCACAGTaGTTATCTGATGCATACAGA +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPIGYSQ*LSDAYR
Trigger: TCTGTATGCATCAGATAACAACTGTGAGTAGCCTAT...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 90 bp AGTACGTCTTTCAAGCAGATTTTCTATTTCAGAACCAGAAAGCCCTaGTTCAGGACCTGTTGGTTGACTACTAAATGCTTTATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: STSFKQIFYFRTRKP*FRTCWLTTKCFIFF
Trigger: GAAGAAAATAAAGCATTTAGTAGTCAACCAACAGGTCCTGAACCAGGGCTTTCTGGTTCTGAAATAGAAAATCTGCTTGAAAGACGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTGGACCATTACTTaGACAGGTGGGAAATGCACT +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLNWTIT*TGGKCT
Trigger: AGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGACCTTTGTTCCACTTaGTCCAACATGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKDLCST*SNMMRR
Trigger: TCTCCTCATCATGTTGGACAAAGTGGAACAAAGGTC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAGCAAATGGGCTTCGCTaGACAGAAGTAATGCTAACT +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKANGLR*TEVMLT
Trigger: AGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGC...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTGCTAGCCATCAGTTaGCTTGATGATGTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLLLAIS*LDDVLA
Trigger: GGCAAGAACATCATCAAGCAAACTGATGGCTAGCAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGCAGCTTGTTTTATATaGTTTCTTTCCAGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPAACFI*FLSSEF
Trigger: GAACTCACTGGAAAGAAACAATATAAAACAAGCTGC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGGCAGCTTGTTTTATATaGTTTCTTTCCAGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWAACFI*FLSSEF
Trigger: GAACTCACTGGAAAGAAACAATATAAAACAAGCTGC...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACTACATCTGGGACTTTaGGATCCCAAGTGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKLHLGL*DPKCLA
Trigger: TGCTAAACACTTGGGATCCAAAAGTCCCAGATGTAG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGAGTCCTTGCATAATTTaGTGTATTGAACTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSPCII*CIELAH
Trigger: GTGAGCAAGTTCAATACACAAAATTATGCAAGGACT...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAATGGGAGACCCTGCTTaGCTTGATGTAAGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKMGDPA*LDVSKG
Trigger: ACCTTTACTTACATCAAGCAAAGCAGGGTCTCCCAT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCACCATGCAAAGATTCTTaGATTCTAGAAGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPPCKDS*ILEVPF
Trigger: AAATGGCACTTCTAGAATCAAAGAATCTTTGCATGG...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGGGCACTGTGATTGTTaGCAGCATCAACAATGTTGT +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLGHCDC*QHQQCC
Trigger: ACAACATTGTTGATGCTGCAAACAATCACAGTGCCC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCAGCATGTAATATAGTATaGGGTTGGTTTTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPACNIV*GWFWSI
Trigger: GATTGACCAAAACCAACCCAATACTATATTACATGC...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACCAAATGTCCTTGTCTaGTGTTTCTCGACTGGTAAC +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKPNVLV*CFSTGN
Trigger: GTTACCAGTCGAGAAACACAAGACAAGGACATTTGG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAATGGAATCACCTGAGTTaGGTAAGTGGCCCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKWNHLS*VSGPVF
Trigger: AAAAACAGGGCCACTTACCAAACTCAGGTGATTCCA...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp CTTCGAATCAAAGCACATTCTTTCACAAAGCTTAAACCACAGACGTCATGTCCATCGCATCAAATTTGGTaGTGTAAACACCAGAATTCT +
Preference number: 5 (lower is better)
Translates to: LRIKAHSFTKLKPQTSCPSHQIW*CKHQNS
Trigger: AGAATTCTGGTGTTTACACAACCAAATTTGATGCGA...TGGACATGACGTCTGTGGTTTAAGCTTTGTGAAAGAATGTGCTTTGATTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATAACACTCGCAGGTACCACAGGAATGGTGAGAATTAACTTTTACAAGAGATGGTCGCATCAAATTTGGTaGTGTAAACACCAGAATTCT +
Preference number: 5 (lower is better)
Translates to: ITLAGTTGMVRINFYKRWSHQIW*CKHQNS
Trigger: AGAATTCTGGTGTTTACACAACCAAATTTGATGCGA...CCATCTCTTGTAAAAGTTAATTCTCACCATTCCTGTGGTACCTGCGAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACAGCAAGTCTTTCACTaGCTGCTTGATTTGCATTTT +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLQQVFH*LLDLHF
Trigger: AAAATGCAAATCAAGCAGCAAGTGAAAGACTTGCTG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTATTTTCAGTTCGGTGTTaGCAAGACAAGTCTATGGGA +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLFSVRC*QDKSMG
Trigger: TCCCATAGACTTGTCTTGCAAACACCGAACTGAAAA...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAACACTTCTCCATGATGTaGCATAATACCCACTCCTAT +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKHFSMM*HNTHSY
Trigger: ATAGGAGTGGGTATTATGCAACATCATGGAGAAGTG...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTACACTTCTCCATGATGTaGCATAATACCCACTCCTAT +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLHFSMM*HNTHSY
Trigger: ATAGGAGTGGGTATTATGCAACATCATGGAGAAGTG...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTAGCCTATATTCCAGTATaGCTAATACTGGGATACTCT +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLAYIPV*LILGYS
Trigger: AGAGTATCCCAGTATTAGCAATACTGGAATATAGGC...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAAGTTTTTAAGTGACTaGATGCAACACCATAGCACC +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKKFLSD*MQHHST
Trigger: GGTGCTATGGTGTTGCATCAAGTCACTTAAAAACTT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATCTTTCACTTGCTGCTaGATTTGCATTTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLSFTCC*ICILRF
Trigger: AAAACGCAAAATGCAAATCAAGCAGCAAGTGAAAGA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTACCATGCAAAGATTCTTaGATTCTAGAAGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLPCKDS*ILEVPF
Trigger: AAATGGCACTTCTAGAATCAAAGAATCTTTGCATGG...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp GCTACTCACAGTTGTTATCTGATGCATACAGAAGTGTTAAACAACCAATTGCTATCGCATCAAATTTGGTaGTGTAAACACCAGAATTCT +
Preference number: 5 (lower is better)
Translates to: ATHSCYLMHTEVLNNQLLSHQIW*CKHQNS
Trigger: AGAATTCTGGTGTTTACACAACCAAATTTGATGCGA...TAGCAATTGGTTGTTTAACACTTCTGTATGCATCAGATAACAACTGTGAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAAAGTGTTCACAAGGGCTaGGTTTCTATTCACTTTAAA +
Preference number: 5 (lower is better)
Translates to: MHKQSESVDVCPFSLFFKSVHKG*VSIHFK
Trigger: TTTAAAGTGAATAGAAACCAAGCCCTTGTGAACACT...TTTAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAGTGTTCACAAGGGCTaGGTTTCTATTCACTTTAAA +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLSVHKG*VSIHFK
Trigger: TTTAAAGTGAATAGAAACCAAGCCCTTGTGAACACT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAGCAGCTTGTTTTATATaGTTTCTTTCCAGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLAACFI*FLSSEF
Trigger: GAACTCACTGGAAAGAAACAATATAAAACAAGCTGC...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS-3UTR CAA 90 bp ATATGCATAAACAAAGTGAATCTGTGGATGTATGCCCTTTCTCACTGTTCTTTAAGTCCTTGCATAATTTaGTGTATTGAACTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ICINKVNLWMYALSHCSLSPCII*CIELAH
Trigger: GTGAGCAAGTTCAATACACAAAATTATGCAAGGACT...TAAAGAACAGTGAGAAAGGGCATACATCCACAGATTCACTTTGTTTATGCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp CAGGCTCGGTCCGCGAAGGCGCCTGCCGCCCCGTCCTaGCCCGGCGCCCCGGCGAGCTCTTCCCTCCGACCA +
Preference number: 6 (lower is better)
Translates to: QARSAKAPAAPS*PGAPASSSLRP
Trigger: TGGTCGGAGGGAAGAGCTCGCCGGGGCGCCGGGCCAGGACGGGGCGGCAGGCGCCTTCGCGGACCGAGCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp CCCAGGAGCAGGGTTAATCCTCGGCTGCTTTGTCACTaGGAAGTCTCCAGCGGAGTCTGTCAGCCAATCTGC +
Preference number: 6 (lower is better)
Translates to: PRSRVNPRLLCH*EVSSGVCQPIC
Trigger: GCAGATTGGCTGACAGACTCCGCTGGAGACTTCGCAGTGACAAAGCAGCCGAGGATTAACCCTGCTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637630.1
ENST00000637963.1
CDS GCA 72 bp AAGTCTTCGGACACTGGTAAGGCAGGTGCGCTTCTCTaGACAGCAGGAGCCATACCCAAGAATGGGGCACTC +
Preference number: 6 (lower is better)
Translates to: KSSDTGKAGALL*TAGAIPKNGAL
Trigger: GAGTGCCCCATTCTTGGGTATGGCTCCTGCTGTGCAGAGAAGCGCACCTGCCTTACCAGTGTCCGAAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp CACTGCGAAGTCTCCAGCGGAGTCTGTCAGCCAATCTaGATCATCCCCGGGAAGGATCTGACCCAACAAGAC +
Preference number: 6 (lower is better)
Translates to: HCEVSSGVCQPI*IIPGKDLTQQD
Trigger: GTCTTGTTGGGTCAGATCCTTCCCGGGGATGATGCAGATTGGCTGACAGACTCCGCTGGAGACTTCGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637630.1
ENST00000637963.1
CDS GCA 72 bp ACACCCATTCAAAAGCCCAGATTCTGGTCTAGACCCTaGACAGCCCAAGTGCTCAGGGAAAGTAGGACTCAC +
Preference number: 6 (lower is better)
Translates to: TPIQKPRFWSRP*TAQVLRESRTH
Trigger: GTGAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAATCTGGGCTTTTGAATGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp TGCGCTTCTCTGCACAGCAGGAGCCATACCCAAGAATaGGGCACTCTTAGCATCATGGCTCAAGTGCACATT +
Preference number: 6 (lower is better)
Translates to: CASLHSRSHTQE*GTLSIMAQVHI
Trigger: AATGTGCACTTGAGCCATGATGCTAAGAGTGCCCCATTCTTGGGTATGGCTCCTGCTGTGCAGAGAAGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp AGCCCAGATTCTGGTCTAGACCCTGCACAGCCCAAGTaGTCAGGGAAAGTAGGACTCACAGGAGTTTTTACT +
Preference number: 6 (lower is better)
Translates to: SPDSGLDPAQPK*SGKVGLTGVFT
Trigger: AGTAAAAACTCCTGTGAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAATCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp GACAGAGCAACAGTCTGCAGCCTAGAGCTGAATGACTaGAGCAAAGAGGCCAGTAATGTGCTATCCTGTTTG +
Preference number: 6 (lower is better)
Translates to: DRATVCSLELND*SKEASNVLSCL
Trigger: CAAACAGGATAGCACATTACTGGCCTCTTTGCTTCAGTCATTCAGCTCTAGGCTGCAGACTGTTGCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp ATTCATGATAGAATCAGACAGCCTCTTCCGCTTTGCTaGATTCCAGTCCTCAGAAGACTGCAACAGTCTGGC +
Preference number: 6 (lower is better)
Translates to: IHDRIRQPLPLC*IPVLRRLQQSG
Trigger: GCCAGACTGTTGCAGTCTTCTGAGGACTGGAATGCAGCAAAGCGGAAGAGGCTGTCTGATTCTATCATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 72 bp GAGCTGGTAACTGCCAACATCCTTCTGGCCATTTTCTaGCAATCTGGCCATAGCAGCAAGTCTTTCACTTGC +
Preference number: 6 (lower is better)
Translates to: ELVTANILLAIF*QSGHSSKSFTC
Trigger: GCAAGTGAAAGACTTGCTGCTATGGCCAGATTGCAAGAAAATGGCCAGAAGGATGTTGGCAGTTACCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 90 bp ACACAGTTTTCTGAGAGAAGCAGCTGTTTCAGAACATTAAAGCTTTaGCTCTCTCTGGCCCAACTCCTGTGTTCACTTTCGCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: TQFSERSSCFRTLKL*LSLAQLLCSLSLAE
Trigger: CTCAGCCAGCGAAAGTGAACACAGGAGTTGGGCCAGAGAGAGCAAAAGCTTTAATGTTCTGAAACAGCTGCTTCTCTCAGAAAACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp GAATCCTGGTGCACATCAGAGCCAAGCTCTTCTCCATaGGTCATGTTCAATAGAAGTGTTCACAAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: ESWCTSEPSSSP*VMFNRSVHKGL
Trigger: CAAGCCCTTGTGAACACTTCTATTGAACATGACTCATGGAGAAGAGCTTGGCTCTGATGTGCACCAGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
ENST00000411932.1
CDS TCA 72 bp GGTGCAGCATGCCAGACCCCTGATATGTATGTGTATTaGGAACTGGACCATTACTTTGACAGGTGGGAAATG +
Preference number: 6 (lower is better)
Translates to: GAACQTPDMYVY*ELDHYFDRWEM
Trigger: CATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACACATACATATCAGGGGTCTGGCATGCTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp TCTGTGTTTCCAGTTAACAGCTGTTTGCTGGGTCTCTaGTCTTCCACTGACATGGATGACTGCATTCCACAT +
Preference number: 6 (lower is better)
Translates to: SVFPVNSCLLGL*SSTDMDDCIPH
Trigger: ATGTGGAATGCAGTCATCCATGTCAGTGGAAGAGCAGAGACCCAGCAAACAGCTGTTAACTGGAAACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp TGCAAATGGGCTTCGCTTGACAGAAGTAATGCTAACTaGCTACAAGCAACACTAGGTTTAGGTGAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: CKWASLDRSNAN*LQATLGLGEVA
Trigger: TGCCACCTCACCTAAACCTAGTGTTGCTTGTAGCCAGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp AACATGCCTCTTCTTATTAACAGGACCTGGGCTCTGTaGGACTGCTCTGAATCTGTCCATGCAAACCAACTT +
Preference number: 6 (lower is better)
Translates to: NMPLLINRTWAL*DCSESVHANQL
Trigger: AAGTTGGTTTGCATGGACAGATTCAGAGCAGTCCCACAGAGCCCAGGTCCTGTTAATAAGAAGAGGCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637630.1
CDS TCA 72 bp CCTGTAATCTTGCAGCACATGACAACGGTTCACTCATaGCCTTTGTTCCACTTTGTCCAACATGATGAGGAG +
Preference number: 6 (lower is better)
Translates to: PVILQHMTTVHS*PLFHFVQHDEE
Trigger: CTCCTCATCATGTTGGACAAAGTGGAACAAAGGTCATGAGTGAACCGTTGTCATGTGCTGCAAGATTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp GCCCAACTCCTGTGTTCACTTTCGCTGGCTGAGCCATaGCCAGCAGGATATTTAAATTCAAGATCATTTCTG +
Preference number: 6 (lower is better)
Translates to: AQLLCSLSLAEP*PAGYLNSRSFL
Trigger: CAGAAATGATCTTGAATTTAAATATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACAGGAGTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp AGTAGGACTCACAGGAGTTTTTACTACACCTGGGTATaGAAATGTCCTGTTATCCATGCAACTGCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: SRTHRSFYYTWV*KCPVIHATAGL
Trigger: CAGCCCAGCAGTTGCATGGATAACAGGACATTTTCATACCCAGGTGTAGTAAAAACTCCTGTGAGTCCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp AAACGTTGCAGAGTTCTGTGCACCTTCATTTTGGGCTaGTTTCTCTCCTGGTGGGTCTTTGCTTTTTGTAAG +
Preference number: 6 (lower is better)
Translates to: KRCRVLCTFILG*FLSWWVFAFCK
Trigger: CTTACAAAAAGCAAAGACCCACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACAGAACTCTGCAACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp CTCTTCCTGGTTAAGCAAGGACCCATACAGTACTTCTaGGGCACTGTGATTGTTTGCAGCATCAACAATGTT +
Preference number: 6 (lower is better)
Translates to: LFLVKQGPIQYF*GTVIVCSINNV
Trigger: AACATTGTTGATGCTGCAAACAATCACAGTGCCCCAGAAGTACTGTATGGGTCCTTGCTTAACCAGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 72 bp ACACTTTCAGCAGATGAAGCCTCCCTCCAAATGTCCTaGTCTTGTGTTTCTCGACTGGTAACAGAATTGCCT +
Preference number: 6 (lower is better)
Translates to: TLSADEASLQMS*SCVSRLVTELP
Trigger: AGGCAATTCTGTTACCAGTCGAGAAACACAAGACAAGGACATTTGGAGGGAGGCTTCATCTGCTGAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 72 bp TTAGCACGCTTCCCAGAAGTCCATAAACTTCTCCATTaGCGCTGTGTGGGCGAGAAGCATTATTTCCCATAT +
Preference number: 6 (lower is better)
Translates to: LARFPEVHKLLH*RCVGEKHYFPY
Trigger: ATATGGGAAATAATGCTTCTCGCCCACACAGCGCAAATGGAGAAGTTTATGGACTTCTGGGAAGCGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 90 bp TCTTTATCGTTAGCACGCTTCCCAGAAGTCCATAAACTTCTCCATTaGCGCTGTGTGGGCGAGAAGCATTATTTCCCATATGGCTATTGT +
Preference number: 6 (lower is better)
Translates to: SLSLARFPEVHKLLH*RCVGEKHYFPYGYC
Trigger: ACAATAGCCATATGGGAAATAATGCTTCTCGCCCACACAGCGCAAATGGAGAAGTTTATGGACTTCTGGGAAGCGTGCTAACGATAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp GGACTTTTGGATCCCAAGTGTTTAGCAAGGATTGAGTaGAGTTATCCAGGGAAACAGGTTGGTCAGATTCTG +
Preference number: 6 (lower is better)
Translates to: GLLDPKCLARIE*SYPGKQVGQIL
Trigger: CAGAATCTGACCAACCTGTTTCCCTGGATAACTTCACTCAATCCTTGCTAAACACTTGGGATCCAAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp TCTGGGACTTTTGGATCCCAAGTGTTTAGCAAGGATTaGGTGAAGTTATCCAGGGAAACAGGTTGGTCAGAT +
Preference number: 6 (lower is better)
Translates to: SGTFGSQVFSKD*VKLSRETGWSD
Trigger: ATCTGACCAACCTGTTTCCCTGGATAACTTCACTCAATCCTTGCTAAACACTTGGGATCCAAAAGTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp CGACTTAGCAGACCATTCTTGGAGAAAGAAAAATCCTaGGGTGAAACAGGCTCCGATTTAAAGTCTTCGGAC +
Preference number: 6 (lower is better)
Translates to: RLSRPFLEKEKS*GETGSDLKSSD
Trigger: GTCCGAAGACTTTAAATCGGAGCCTGTTTCACCTCAGGATTTTTCTTTCTCCAAGAATGGTCTGCTAAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp CTGGGTATGAAAATGTCCTGTTATCCATGCAACTGCTaGGCTGAGTGGAACTGTACATCAGTCCATTTAAAG +
Preference number: 6 (lower is better)
Translates to: LGMKMSCYPCNC*AEWNCTSVHLK
Trigger: CTTTAAATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACAGGACATTTTCATACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp TCCCAGAAGTCCATAAACTTCTCCATTTGCGCTGTGTaGGCGAGAAGCATTATTTCCCATATGGCTATTGTA +
Preference number: 6 (lower is better)
Translates to: SQKSINFSICAV*ARSIISHMAIV
Trigger: TACAATAGCCATATGGGAAATAATGCTTCTCGCCCACACAGCGCAAATGGAGAAGTTTATGGACTTCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 90 bp GCCAGACCCCTGATATGTATGTGTATTGAGAACTGGACCATTACTTaGACAGGTGGGAAATGCACTGCCAGAAATGTTAAAGTTCTGATC +
Preference number: 6 (lower is better)
Translates to: ARPLICMCIENWTIT*TGGKCTARNVKVLI
Trigger: GATCAGAACTTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACACATACATATCAGGGGTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 90 bp CCGATTTGTACTGGGGCTTTCTATCACAGAAGTCCTTGCATAATTTaGTGTATTGAACTTGCTCACATCATTGTGTACTCCCTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: PICTGAFYHRSPCII*CIELAHIIVYSLRA
Trigger: AGCCCTCAGGGAGTACACAATGATGTGAGCAAGTTCAATACACAAAATTATGCAAGGACTTCTGTGATAGAAAGCCCCAGTACAAATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 90 bp TTCTGTGCACCTTCATTTTGGGCTGGTTTCTCTCCTGGTGGGTCTTaGCTTTTTGTAAGGTCCATTGAGTGGTTAGATGCAGTATTTGTT +
Preference number: 6 (lower is better)
Translates to: FCAPSFWAGFSPGGS*LFVRSIEWLDAVFV
Trigger: AACAAATACTGCATCTAACCACTCAATGGACCTTACAAAAAGCAAAGACCCACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp GTACTACTTTCCTCAAAAATGCTTCCTCTCTCACTGTaGCTGTGTCCATTCATTGGCTTAGGTATAGTCTGG +
Preference number: 6 (lower is better)
Translates to: VLLSSKMLPLSL*LCPFIGLGIVW
Trigger: CCAGACTATACCTAAGCCAATGAATGGACACAGTCACAGTGAGAGAGGAAGCATTTTTGAGGAAAGTAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp ACTTCTGTGCGGGGACAAATCTCGCACACAGTTTTCTaGGAGAAGCAGCTGTTTCAGAACATTAAAGCTTTT +
Preference number: 6 (lower is better)
Translates to: TSVRGQISHTVF*EKQLFQNIKAF
Trigger: AAAAGCTTTAATGTTCTGAAACAGCTGCTTCTCTCAGAAAACTGTGTGCGAGATTTGTCCCCGCACAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp GCATTTTGCGTTTTTAAAGCGTGTTCTCGAGAATACTaGTGCAAATGGGCTTCGCTTGACAGAAGTAATGCT +
Preference number: 6 (lower is better)
Translates to: AFCVFKACSREY*CKWASLDRSNA
Trigger: AGCATTACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTCTCGAGAACACGCTTTAAAAACGCAAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp ATGCAAATATCAGTGTTCTTTCTCTCACAGCAGTGGTaGCAAGCACAGGTACACCGGAGTAATCAATTTGTT +
Preference number: 6 (lower is better)
Translates to: MQISVFFLSQQW*QAQVHRSNQFV
Trigger: AACAAATTGATTACTCCGGTGTACCTGTGCTTGGCACCACTGCTGTGAGAGAAAGAACACTGATATTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411932.1
CDS CCA 72 bp GTTTTTAAAGCGTGTTCTCGAGAATACTGCTGCAAATaGGCTTCGCTTGACAGAAGTAATGCTAACTGGCTA +
Preference number: 6 (lower is better)
Translates to: VFKACSREYCCK*ASLDRSNANWL
Trigger: TAGCCAGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTCTCGAGAACACGCTTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp GAGTGGTTAGATGCAGTATTTGTTAGCTTTTCAGACTaGGTACTGCAGACATATGGTGGGGAATTCCATTTG +
Preference number: 6 (lower is better)
Translates to: EWLDAVFVSFSD*VLQTYGGEFHL
Trigger: CAAATGGAATTCCCCACCATATGTCTGCAGTACTCAGTCTGAAAAGCTAACAAATACTGCATCTAACCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp TTAAGCAAGGACCCATACAGTACTTCTGGGGCACTGTaGTTGTTTGCAGCATCAACAATGTTGTTTTTCATC +
Preference number: 6 (lower is better)
Translates to: LSKDPYSTSGAL*LFAASTMLFFI
Trigger: GATGAAAAACAACATTGTTGATGCTGCAAACAATCACAGTGCCCCAGAAGTACTGTATGGGTCCTTGCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp ATTGAGAACTGGACCATTACTTTGACAGGTGGGAAATaGACTGCCAGAAATGTTAAAGTTCTGATCCTCTTC +
Preference number: 6 (lower is better)
Translates to: IENWTITLTGGK*TARNVKVLILF
Trigger: GAAGAGGATCAGAACTTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS GCA 72 bp TTTTGCGTTTTTAAAGCGTGTTCTCGAGAATACTGCTaGAAATGGGCTTCGCTTGACAGAAGTAATGCTAAC +
Preference number: 6 (lower is better)
Translates to: FCVFKACSREYC*KWASLDRSNAN
Trigger: GTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTCTCGAGAACACGCTTTAAAAACGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp AAAATGTCCTGTTATCCATGCAACTGCTGGGCTGAGTaGAACTGTACATCAGTCCATTTAAAGAAGAAATGC +
Preference number: 6 (lower is better)
Translates to: KMSCYPCNCWAE*NCTSVHLKKKC
Trigger: GCATTTCTTCTTTAAATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACAGGACATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp TTTCTATCACAGAAGTCCTTGCATAATTTTGTGTATTaGACTTGCTCACATCATTGTGTACTCCCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: FLSQKSLHNFVY*TCSHHCVLPEG
Trigger: GCCCTCAGGGAGTACACAATGATGTGAGCAAGTTCAATACACAAAATTATGCAAGGACTTCTGTGATAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CCA 72 bp TTCAAGCAGATTTTCTATTTCAGAACCAGAAAGCCCTaGTTCAGGACCTGTTGGTTGACTACTAAATGCTTT +
Preference number: 6 (lower is better)
Translates to: FKQIFYFRTRKP*FRTCWLTTKCF
Trigger: AAAGCATTTAGTAGTCAACCAACAGGTCCTGAACCAGGGCTTTCTGGTTCTGAAATAGAAAATCTGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 72 bp ACTGGGGCTTTCTATCACAGAAGTCCTTGCATAATTTaGTGTATTGAACTTGCTCACATCATTGTGTACTCC +
Preference number: 6 (lower is better)
Translates to: TGAFYHRSPCII*CIELAHIIVYS
Trigger: GGAGTACACAATGATGTGAGCAAGTTCAATACACAAAATTATGCAAGGACTTCTGTGATAGAAAGCCCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS CAA 72 bp CTGATATGTATGTGTATTGAGAACTGGACCATTACTTaGACAGGTGGGAAATGCACTGCCAGAAATGTTAAA +
Preference number: 6 (lower is better)
Translates to: LICMCIENWTIT*TGGKCTARNVK
Trigger: TTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACACATACATATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5
CDS TCA 72 bp ACCACTGCTGTCATCTGTAAAACTAGGATTGTTATCTaGATATTCATCAATAGTTGTAGGTGTACTACTTTC +
Preference number: 6 (lower is better)
Translates to: TTAVICKTRIVI*IFINSCRCTTF
Trigger: GAAAGTAGTACACCTACAACTATTGATGAATATTCAGATAACAATCCTAGTTTTACAGATGACAGCAGTGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318948.7
ENST00000400199.5
ENST00000400202.5