RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115216

Ensembl transcript IDs: ENST00000233557.7, ENST00000356442.4, ENST00000379852.8, ENST00000379863.7, ENST00000419281.6, ENST00000460499.5, ENST00000486701.1, ENST00000493746.1, ENST00000493768.5

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTaGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGC +
Preference number: 1 (lower is better)
Translates to: EFGSPSARGPPFHTG*AGAGRSATSPQLEG
Trigger: GCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
3UTR TCA 90 bp GGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCTGCTaGGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGT +
Preference number: 1 (lower is better)
Translates to: GAGRSATSPQLEGGC*EGPGPRLCKTSKQS
Trigger: ACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
3UTR-3UTR CCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCCAGGGTAATACTGACTaGGGGGAAGGGACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGQGNTD*GEGTGG
Trigger: CCCTCCTGTCCCTTCCCCCCAGTCAGTATTACCCTG...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
3UTR-3UTR GCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCCCAGGCCCACGTCTGTaGAAAACAAGTAAACAAAGT +
Preference number: 2 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGPGPRL*KTSKQS
Trigger: ACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGG...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
3UTR-3UTR GCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCCAGGCCCACGTCTGTaGAAAACAAGTAAACAAAGT +
Preference number: 2 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPPGPRL*KTSKQS
Trigger: ACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
3UTR-3UTR CCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCAGGGTAATACTGACTaGGGGGAAGGGACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREQGNTD*GEGTGG
Trigger: CCCTCCTGTCCCTTCCCCCCAGTCAGTATTACCCTG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
3UTR CCA 72 bp TCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTaGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAA +
Preference number: 3 (lower is better)
Translates to: SPSARGPPFHTG*AGAGRSATSPQ
Trigger: TTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
3UTR TCA 72 bp AGATCAGCGACTAGCCCCCAACTAGAAGGCGGCTGCTaGGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGT +
Preference number: 3 (lower is better)
Translates to: RSATSPQLEGGC*EGPGPRLCKTS
Trigger: ACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCCGCTCTCCTCCCCTTaGGCCGGTCCGGCCGAGACC +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPPLSSP*AGPAET
Trigger: GGTCTCGGCCGGACCGGCGCAAGGGGAGGAGAGCGG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR GCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTCCGCGCCCCGCAGCCTaGGCTTCAGCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATPRPAA*ASAPAR
Trigger: CCGAGCTGGAGCTGAAGCGCAGGCTGCGGGGCGCGG...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCACCGCCCGGTCCAGGTaGCCCAGATGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGTARSR*PRWFCW
Trigger: CCAGCAGAACCATCTGGGGCACCTGGACCGGGCGGT...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR GCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCCCGCGCCCCGCAGCCTaGGCTTCAGCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGPRPAA*ASAPAR
Trigger: CCGAGCTGGAGCTGAAGCGCAGGCTGCGGGGCGCGG...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTCATTGGGTGACGTTCTaGGTGGGCGGGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATHWVTF*VGGARP
Trigger: GGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATG...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR GCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCTCCTCCTGCTGTGGCTaGTGGGGCCGAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPSSCCG*WGRGSP
Trigger: TGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGA...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGGGCGTTCGCTGGGGTaGGCTTCCACCCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRGRSLG*ASTRSP
Trigger: AGGAGAGCGGGTGGAAGCCCACCCCAGCGAACGCCC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACCCTCGGGCGTTCGCTaGGGTGGGCTTCCACCCGCT +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSPSGVR*GGLPPA
Trigger: AGCGGGTGGAAGCCCACCCCAGCGAACGCCCGAGGG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCCCTTTCCACACAGGCTaGGCGGGAGCCGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGPFHTG*AGAGRS
Trigger: TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGG...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTCGACTCCCTCACAGCTaGGCTCCGCAGCGCAACCGA +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATRLPHS*APQRNR
Trigger: TCGGTTGCGCTGCGGAGCGCAGCTGTGAGGGAGTCG...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGATCCTGCTGTGGCTGCTaGGGCCGAGGCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRSCCGC*GRGSPK
Trigger: CTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGA...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTCAGGTTTCCATTGGGTaGCGTTCTGGGTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATQVSIG*RSGWAG
Trigger: CCCCGCCCACCCAGAACGTCACCCAATGGAAACCTG...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR TCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCGGGCCGCAAGGAGTTTaGGCGAGGGCACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGGPQGV*ARALQT
Trigger: TGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCC...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCGTGTCAGGTGGTGTTTaGCTCCCTCCTCCACCGACT +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGVSGGV*LPPPPT
Trigger: AGTCGGTGGAGGAGGGAGTCAAACACCACCTGACAC...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGGGCCTGGCCCGAGTaGGCTCTAAGAGGAGACGGT +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATRAWPE*ALRGDG
Trigger: ACCGTCTCCTCTTAGAGCTCACTCGGGCCAGGCCCT...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGTCCTGCTGTGGCTGCTaGGGCCGAGGCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLSCCGC*GRGSPK
Trigger: CTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGA...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACCCAGATGGTTCTGCTaGACGCAGAGAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRPRWFC*TQRGPP
Trigger: AGGAGGCCCTCTCTGCGTCCAGCAGAACCATCTGGG...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCCCCCTCCGACATGCTaGAAGGAACACTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPPPPTC*KEHSGL
Trigger: CAGGCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
67% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCCTTTCCACACAGGCTaGGCGGGAGCCGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLPFHTG*AGAGRS
Trigger: TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCCCTTTCCACACAGGCTaGGCGGGAGCCGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGPFHTG*AGAGRS
Trigger: TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGG...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCCCCCTCCGACATGCTaGAAGGAACACTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPPPPTC*KEHSGL
Trigger: GAGGCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
67% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGACGGTGACAGCGGCTaGGTTGAGGGTACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRDGDSG*VEGTVP
Trigger: AGGAACAGTACCCTCAACTCAGCCGCTGTCACCGTC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCACCAACGATGGGCGGTaGCGCACCGCCGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFTNDGR*RTAGRF
Trigger: AAACCTGCCGGCGGTGCGGCACCGCCCATCGTTGGT...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGCATCAGCACCACCTTaGGAGTCTCCACCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRASAPP*ESPPQL
Trigger: CAGCTGAGGTGGAGACTCGCAAGGTGGTGCTGATGC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTCTAATGAAGCCCAGCTaGACCAGCTCAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATLMKPS*TSSAAN
Trigger: GTTGGCGGCTGAGCTGGTGCAGCTGGGCTTCATTAG...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCTAATGAAGCCCAGCTaGACCAGCTCAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPLMKPS*TSSAAN
Trigger: GTTGGCGGCTGAGCTGGTGCAGCTGGGCTTCATTAG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTTCCAGGTGCCCCAGATaGTTCTGCTGGACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATSRCPR*FCWTQR
Trigger: TCTCTGCGTCCAGCAGAACCATCTGGGGCACCTGGA...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCGTTTTCGGTCCCAGCTaGGGCTCGTCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPVFGPS*GSSLCP
Trigger: TGGACAGAGAGACGAGCCCCAGCTGGGACCGAAAAC...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACCGGCAGGTTTCCATTaGGTGACGTTCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSPAGFH*VTFWVG
Trigger: GCCCACCCAGAACGTCACCCAATGGAAACCTGCCGG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCGGAACAGAAGTTCTCTaGCTGTTGGTCTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGGTEVL*LLVCEQ
Trigger: CTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCC...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGTCTCCACCTCAGCTaGTTCAGGTGTCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGSLHLS*FRCRSL
Trigger: AAGACTCCGACACCTGAACCAGCTGAGGTGGAGACT...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACAGGGTAATACTGACTaGGGGGAAGGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRQGNTD*GEGTGG
Trigger: CCCTCCTGTCCCTTCCCCCCAGTCAGTATTACCCTG...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGTGTCAGGTGGTGTTTaGCTCCCTCCTCCACCGACT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLVSGGV*LPPPPT
Trigger: AGTCGGTGGAGGAGGGAGTCAAACACCACCTGACAC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCACTCCCCCTCCGACATaGTGGAAGGAACACTCAGGC +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGTPPPT*WKEHSG
Trigger: GCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGGAGT...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCGTTGGTGTCCCACAATaGAGTGGGCCGCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPVGVPQ*SGPQGV
Trigger: AACTCCTTGCGGCCCACTGCATTGTGGGACACCAAC...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCATCAGCACCACCTTaGGAGTCTCCACCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSASAPP*ESPPQL
Trigger: CAGCTGAGGTGGAGACTCGCAAGGTGGTGCTGATGC...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAAGGTCACAGCTCAGGTaGCGGTTCAGTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRRSQLR*RFSLSS
Trigger: GGAGGACAAACTGAACCGGCACCTGAGCTGTGACCT...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACTAATGAAGCCCAGCTaGACCAGCTCAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSLMKPS*TSSAAN
Trigger: GTTGGCGGCTGAGCTGGTGCAGCTGGGCTTCATTAG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCGAAGTCAACCGGCTCTaGTCAGCCTCACTAATGAAG +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGEVNRL*SASLMK
Trigger: CTTCATTAGTGAGGCTGACCAGAGCCGGTTGACTTC...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACAGGGTAATACTGACTaGGGGGAAGGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSQGNTD*GEGTGG
Trigger: CCCTCCTGTCCCTTCCCCCCAGTCAGTATTACCCTG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCGACTCTCCATTGCCCTaGATCTCCAGCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGDSPLP*ISSTAI
Trigger: GATGGCAGTGCTGGAGATTCAGGGCAATGGAGAGTC...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGATTCCTGTGGCACATATaGGGACTCTCCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRFLWHI*GLSIAL
Trigger: CAGGGCAATGGAGAGTCCTCATATGTGCCACAGGAA...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTTATTACAGCAGCAACTaGGGCGAATCGAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATYYSSN*GESNGP
Trigger: GGGGCCATTCGATTCGCCTCAGTTGCTGCTGTAATA...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCTGCCCCAGATGGTTCTaGTGGACGCAGAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFCPRWF*WTQRGP
Trigger: AGGCCCTCTCTGCGTCCAGCAGAACCATCTGGGGCA...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR GCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCATCCATGGCCAGGTATaGACTGTCAATACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGIHGQV*TVNTWY
Trigger: GTACCAGGTATTGACAGTGCATACCTGGCCATGGAT...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACCACCGACTCAATGTTaGACTGCATCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRPPTQC*TASAPP
Trigger: AGGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGG...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAAGGTCACAGCTCAGGTaGCGGTTCAGTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSRSQLR*RFSLSS
Trigger: GGAGGACAAACTGAACCGGCACCTGAGCTGTGACCT...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTGCGGAGCCTTCAGGATaGAAGTTCACTCTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATAEPSG*KFTLPL
Trigger: TAAGGGCAGAGTGAACTTCCATCCTGAAGGCTCCGC...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTGGGTCTTCTAGAAGCTaGATGGCACTGCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATGSSRS*MALLMA
Trigger: AGCCATCAGCAGTGCCATCCAGCTTCTAGAAGACCC...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCAGAAGTGTCAGGTaGTGTTTGACTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATSRSVR*CLTPSS
Trigger: GGAGGAGGGAGTCAAACACCACCTGACACTTCTGCT...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAAGCAGAAGTGTCAGGTaGTGTTTGACTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRSRSVR*CLTPSS
Trigger: GGAGGAGGGAGTCAAACACCACCTGACACTTCTGCT...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCCTCCTACCTCTTCTTaGAGGCGCCATGACAGTTCT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLPPTSS*RRHDSS
Trigger: AGAACTGTCATGGCGCCTTCAAGAAGAGGTAGGAGG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR TCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCCCTGGTACATTCCGTTaGTTCACCTCTTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGPGTFR*FTSSRL
Trigger: GAGGCGAGAAGAGGTGAATCAACGGAATGTACCAGG...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCTTCCTGTGGCACATATaGGGACTCTCCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGFLWHI*GLSIAL
Trigger: CAGGGCAATGGAGAGTCCTCATATGTGCCACAGGAA...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCGGGCCGCAAGGAGTTTaGGCGAGGGCACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFGPQGV*ARALQT
Trigger: TGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCC...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCGTGTCAGGTGGTGTTTaGCTCCCTCCTCCACCGACT +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFVSGGV*LPPPPT
Trigger: AGTCGGTGGAGGAGGGAGTCAAACACCACCTGACAC...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCTATTACAGCAGCAACTaGGGCGAATCGAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGYYSSN*GESNGP
Trigger: GGGGCCATTCGATTCGCCTCAGTTGCTGCTGTAATA...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAACCGCGCCCCGCAGCCTaGGCTTCAGCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKPRPAA*ASAPAR
Trigger: CCGAGCTGGAGCTGAAGCGCAGGCTGCGGGGCGCGG...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACAGAGAGGATTTGTGTaGACCAACGCTTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRQRGFV*TNASMP
Trigger: AGGCATGGAAGCGTTGGTGCACACAAATCCTCTCTG...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAGAGAGGATTTGTGTaGACCAACGCTTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPQRGFV*TNASMP
Trigger: AGGCATGGAAGCGTTGGTGCACACAAATCCTCTCTG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACACTGCCATCTCCAGTaGACACATGCCAAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRHCHLQ*THAKGV
Trigger: TACTCCTTTGGCATGTGTGCACTGGAGATGGCAGTG...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGATTCTCTTCCTGGTCCTaGAGGGATTTCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRFSSWS*RDFSQY
Trigger: GTACTGGCTGAAATCCCTGCAGGACCAGGAAGAGAA...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCTTCTCTTCCTGGTCCTaGAGGGATTTCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPFSSWS*RDFSQY
Trigger: GTACTGGCTGAAATCCCTGCAGGACCAGGAAGAGAA...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCGCATCAGCACCACCTTaGGAGTCTCCACCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFASAPP*ESPPQL
Trigger: CAGCTGAGGTGGAGACTCGCAAGGTGGTGCTGATGC...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACCACCGACTCAATGTTaGACTGCATCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSPPTQC*TASAPP
Trigger: AGGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCAAGCAGCTGAGGTTGTaGAGGTCACAGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGKQLRL*RSQEVT
Trigger: TGTCACCTCCTGTGACCTCCACAACCTCAGCTGCTT...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAAAGCAGCTGAGGTTGTaGAGGTCACAGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSKQLRL*RSQEVT
Trigger: TGTCACCTCCTGTGACCTCCACAACCTCAGCTGCTT...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCGGGTCTTCTAGAAGCTaGATGGCACTGCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGGSSRS*MALLMA
Trigger: AGCCATCAGCAGTGCCATCCAGCTTCTAGAAGACCC...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAAAGTTCTCTGGCTGTTaGTCTGCGAGCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSKFSGC*SASRLR
Trigger: TCTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTT...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGGAACAGAAGTTCTCTaGCTGTTGGTCTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLGTEVL*LLVCEQ
Trigger: CTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCGGAACAGAAGTTCTCTaGCTGTTGGTCTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGGTEVL*LLVCEQ
Trigger: CTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCC...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTTCTGGGATCATGTGTTaGTGTCCCACAATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATSGIMC*CPTMQW
Trigger: CCACTGCATTGTGGGACACCAACACATGATCCCAGA...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCTCTGGGATCATGTGTTaGTGTCCCACAATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPSGIMC*CPTMQW
Trigger: CCACTGCATTGTGGGACACCAACACATGATCCCAGA...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAAGTCTCCACCTCAGCTaGTTCAGGTGTCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSSLHLS*FRCRSL
Trigger: AAGACTCCGACACCTGAACCAGCTGAGGTGGAGACT...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCGACTCTCCATTGCCCTaGATCTCCAGCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFDSPLP*ISSTAI
Trigger: GATGGCAGTGCTGGAGATTCAGGGCAATGGAGAGTC...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCGCAGGCACTTTTGAATaGACTCCCTCTGTAATGGGT +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPAGTFE*TPSVMG
Trigger: ACCCATTACAGAGGGAGTTCATTCAAAAGTGCCTGC...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAATCCATGGCCAGGTATaGACTGTCAATACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRIHGQV*TVNTWY
Trigger: GTACCAGGTATTGACAGTGCATACCTGGCCATGGAT...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTATCCATGGCCAGGTATaGACTGTCAATACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATIHGQV*TVNTWY
Trigger: GTACCAGGTATTGACAGTGCATACCTGGCCATGGAT...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCAGAGAGGATTTGTGTaGACCAACGCTTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLQRGFV*TNASMP
Trigger: AGGCATGGAAGCGTTGGTGCACACAAATCCTCTCTG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCCTGAATCTCCAGCACTaGCATCTCCAGTGCACACAT +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGLNLQH*HLQCTH
Trigger: ATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAG...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGTTCTCTTCCTGGTCCTaGAGGGATTTCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLFSSWS*RDFSQY
Trigger: GTACTGGCTGAAATCCCTGCAGGACCAGGAAGAGAA...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGACTCAATGTTGCACTaGATCAGCACCACCTTGCGA +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSDSMLH*ISTTLR
Trigger: TCGCAAGGTGGTGCTGATGCAGTGCAACATTGAGTC...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCCACTTCAAACAATGCTaGGTGGAACAGAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGHFKQC*VEQKFS
Trigger: AGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTG...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCTGTCCCACAATGCAGTaGGCCGCAAGGAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFCPTMQ*AARSLS
Trigger: GCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACA...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGTACAAAGTCTGAACTaGTTCTCTTCCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRVQSLN*FSSWSC
Trigger: GCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTAC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCGGGGATATTCTCATTTaGCATCAGGTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPGDILI*HQVTAQ
Trigger: CTGAGCTGTGACCTGATGCCAAATGAGAATATCCCC...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCGAAGTCAACCGGCTCTaGTCAGCCTCACTAATGAAG +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGEVNRL*SASLMK
Trigger: CTTCATTAGTGAGGCTGACCAGAGCCGGTTGACTTC...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACCAGGGTAATACTGACTaGGGGGAAGGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNQGNTD*GEGTGG
Trigger: CCCTCCTGTCCCTTCCCCCCAGTCAGTATTACCCTG...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCATTCTACCTTTGGGTCTaGGCCACTGCTAAGTACTGT +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSFYLWV*ATAKYC
Trigger: ACAGTACTTAGCAGTGGCTCAGACCCAAAGGTAGAA...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGTTCTACCTTTGGGTCTaGGCCACTGCTAAGTACTGT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLFYLWV*ATAKYC
Trigger: ACAGTACTTAGCAGTGGCTCAGACCCAAAGGTAGAA...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCCTGGTACATTCCGTTaGTTCACCTCTTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFPGTFR*FTSSRL
Trigger: GAGGCGAGAAGAGGTGAATCAACGGAATGTACCAGG...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACGACTCTCCATTGCCCTaGATCTCCAGCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNDSPLP*ISSTAI
Trigger: GATGGCAGTGCTGGAGATTCAGGGCAATGGAGAGTC...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGCAGCTTGTAGTTCTTaGGTTCAGAGAACTGTACCT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRAACSS*VQRTVP
Trigger: AGGTACAGTTCTCTGAACGCAAGAACTACAAGCTGC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTGCAGCTTGTAGTTCTTaGGTTCAGAGAACTGTACCT +
Preference number: 4 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATAACSS*VQRTVP
Trigger: AGGTACAGTTCTCTGAACGCAAGAACTACAAGCTGC...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGCACCAACGCTTCCATaGCTTTTCATTCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRAPTLP*LFIHRL
Trigger: AAGACGATGAATGAAAAGGCATGGAAGCGTTGGTGC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGTCTCCAGTGCACACATaGCAAAGGAGTAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLSPVHT*QRSRCP
Trigger: TGGACATCTACTCCTTTGGCATGTGTGCACTGGAGA...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCATCTCCAGTGCACACATaGCAAAGGAGTAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSSPVHT*QRSRCP
Trigger: TGGACATCTACTCCTTTGGCATGTGTGCACTGGAGA...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCGGGCACTTCAAACAATaGTGGGTGGAACAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGGHFKQ*WVEQKF
Trigger: GAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCC...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGGGCACTTCAAACAATaGTGGGTGGAACAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSGHFKQ*WVEQKF
Trigger: GAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCC...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAATCCTCCTGCTGTGGCTaGTGGGGCCGAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKSSCCG*WGRGSP
Trigger: TGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGA...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCGGGTCTTCTAGAAGCTaGATGGCACTGCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFGSSRS*MALLMA
Trigger: AGCCATCAGCAGTGCCATCCAGCTTCTAGAAGACCC...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGATCAAACAATGCTGGGTaGAACAGAAGTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRSNNAG*NRSSLA
Trigger: AGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGA...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGTACAAAGTCTGAACTaGTTCTCTTCCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLVQSLN*FSSWSC
Trigger: GCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTAC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCAGCAGAAGTGTCAGGTaGTGTTTGACTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFSRSVR*CLTPSS
Trigger: GGAGGAGGGAGTCAAACACCACCTGACACTTCTGCT...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCGACAAGTCTTCACATaGTTGTTGATAGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPRQVFT*LLIVSG
Trigger: TCCTGACACTATCAACAATCATGTGAAGACTTGTCG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGACTGCAGGCACTTTTaGATGAACTCCCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLDCRHF*MNSLCN
Trigger: ATTACAGAGGGAGTTCATTCAAAAGTGCCTGCAGTC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGACTGCAGGCACTTTTaGATGAACTCCCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSDCRHF*MNSLCN
Trigger: ATTACAGAGGGAGTTCATTCAAAAGTGCCTGCAGTC...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCTTAGCAAAAATCCTATaGAAGACAGAGCCAATCTTG +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGLAKIL*KTEPIL
Trigger: CAAGATTGGCTCTGTCTTTCATAGGATTTTTGCTAA...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379863.7
CDS-3UTR GCA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCATGGTAGTTGACAAATaGAAAAACCTGAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGMVVDK*KNLNQR
Trigger: CCTCTGATTCAGGTTTTTGCATTTGTCAACTACCAT...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR GCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGCACCAACGCTTCCATaGCTTTTCATTCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLAPTLP*LFIHRL
Trigger: AAGACGATGAATGAAAAGGCATGGAAGCGTTGGTGC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGGAGTAGATGTCCACTaGTGTTGTCACATTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLGVDVH*CCHISD
Trigger: GTCACTAATGTGACAACAGCAGTGGACATCTACTCC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGGAGTAGATGTCCACTaGTGTTGTCACATTAGTGAC +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSGVDVH*CCHISD
Trigger: GTCACTAATGTGACAACAGCAGTGGACATCTACTCC...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACTGCCATCTCCAGTaGACACATGCCAAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFHCHLQ*THAKGV
Trigger: TACTCCTTTGGCATGTGTGCACTGGAGATGGCAGTG...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGTCCTCCTGCTGTGGCTaGTGGGGCCGAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRESSCCG*WGRGSP
Trigger: TGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGA...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACCAGGCCCACGTCTGTaGAAAACAAGTAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSPGPRL*KTSKQS
Trigger: ACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCCAGGCCCACGTCTGTaGAAAACAAGTAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLPGPRL*KTSKQS
Trigger: ACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCATCAAACAATGCTGGGTaGAACAGAAGTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSSNNAG*NRSSLA
Trigger: AGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGA...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAATCCTGCTGTGGCTGCTaGGGCCGAGGCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKSCCGC*GRGSPK
Trigger: CTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGA...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCGACAAGTCTTCACATaGTTGTTGATAGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLRQVFT*LLIVSG
Trigger: TCCTGACACTATCAACAATCATGTGAAGACTTGTCG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGAGGAACACTCAGGCCTaGACTCCCGACTCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRERNTQA*TPDSAP
Trigger: GGGCGCGGAGTCGGGAGTGCAGGCCTGAGTGTTCCT...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR GCA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACGACTCAATGTTGCACTaGATCAGCACCACCTTGCGA +
Preference number: 4 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNDSMLH*ISTTLR
Trigger: TCGCAAGGTGGTGCTGATGCAGTGCAACATTGAGTC...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCCCCCTCCGACATGCTaGAAGGAACACTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVPPPTC*KEHSGL
Trigger: GAGGCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGG...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACAAAGGAGACTACGTTaGGAAGATGTTTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSQRRLR*EDVWKE
Trigger: TTCTTTCCAAACATCTTCTCAACGTAGTCTCCTTTG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR TCA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACGCAGGCACTTTTGAATaGACTCCCTCTGTAATGGGT +
Preference number: 4 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNAGTFE*TPSVMG
Trigger: ACCCATTACAGAGGGAGTTCATTCAAAAGTGCCTGC...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGGGGCCGCAAGGAGTTTaGGCGAGGGCACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVGPQGV*ARALQT
Trigger: TGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCC...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGATAGATCCCATTCCTaGCATCTTCAAGGAATTTAT +
Preference number: 4 (lower is better)
Translates to: VPVGLLSTQAGREPADQRDRSHS*HLQGIY
Trigger: ATAAATTCCTTGAAGATGTCAGGAATGGGATCTATC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGTGTTCCTGGCAAAATTaGACTTGTTCAAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLCSWQN*TCSRSL
Trigger: AAGAGACCTTGAACAAGTTCAATTTTGCCAGGAACA...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGGACGGTGACAGCGGCTaGGTTGAGGGTACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVDGDSG*VEGTVP
Trigger: AGGAACAGTACCCTCAACTCAGCCGCTGTCACCGTC...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGAGGGCCTGGCCCGAGTaGGCTCTAAGAGGAGACGGT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRERAWPE*ALRGDG
Trigger: ACCGTCTCCTCTTAGAGCTCACTCGGGCCAGGCCCT...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGACTCCCCCTCCGACATaGTGGAAGGAACACTCAGGC +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVTPPPT*WKEHSG
Trigger: GCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGGAGT...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGAAGTGTAGATTCTTCTaGTCTTCTCGACAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLKCRFF*SSRQVF
Trigger: GAAGACTTGTCGAGAAGAGCAGAAGAATCTACACTT...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAAAGTGTAGATTCTTCTaGTCTTCTCGACAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSKCRFF*SSRQVF
Trigger: GAAGACTTGTCGAGAAGAGCAGAAGAATCTACACTT...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACGGGGATATTCTCATTTaGCATCAGGTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNGDILI*HQVTAQ
Trigger: CTGAGCTGTGACCTGATGCCAAATGAGAATATCCCC...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGCTGGATGGCACTGCTaGTGGCTTCCTGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKAGWHC*WLPVAH
Trigger: ATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAGC...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGATAGATCCCATTCCTaGCATCTTCAAGGAATTTAT +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLDRSHS*HLQGIY
Trigger: ATAAATTCCTTGAAGATGTCAGGAATGGGATCTATC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGACGGTGACAGCGGCTaGGTTGAGGGTACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKDGDSG*VEGTVP
Trigger: AGGAACAGTACCCTCAACTCAGCCGCTGTCACCGTC...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACGCACCAACGCTTCCATaGCTTTTCATTCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNAPTLP*LFIHRL
Trigger: AAGACGATGAATGAAAAGGCATGGAAGCGTTGGTGC...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGGTTGGTGTCCCACAATaGAGTGGGCCGCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVVGVPQ*SGPQGV
Trigger: AACTCCTTGCGGCCCACTGCATTGTGGGACACCAAC...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGAGGTCACAGCTCAGGTaGCGGTTCAGTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVRSQLR*RFSLSS
Trigger: GGAGGACAAACTGAACCGGCACCTGAGCTGTGACCT...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCTGCTAAGTACTGTCTaGGACTCCCCCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVLLSTV*DSPSDM
Trigger: CATGTCGGAGGGGGAGTCCCAGACAGTACTTAGCAG...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCTGCACTGTCAATACCTaGTACATTCCGTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFCTVNT*YIPLIH
Trigger: GTGAATCAACGGAATGTACCAGGTATTGACAGTGCA...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGTCATTCATCGTCTTGTaGTTCTTTTTGGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLSFIVL*FFLVFF
Trigger: GAAGAAGACCAAAAAGAACCACAAGACGATGAATGA...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCTCATTCATCGTCTTGTaGTTCTTTTTGGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGSFIVL*FFLVFF
Trigger: GAAGAAGACCAAAAAGAACCACAAGACGATGAATGA...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGTGTCCCACAATGCAGTaGGCCGCAAGGAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVCPTMQ*AARSLS
Trigger: GCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACA...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGGCTGGATGGCACTGCTaGTGGCTTCCTGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREAGWHC*WLPVAH
Trigger: ATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAGC...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGACTCCCCCTCCGACATaGTGGAAGGAACACTCAGGC +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRETPPPT*WKEHSG
Trigger: GCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGGAGT...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGAAGCAGCTGAGGTTGTaGAGGTCACAGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVKQLRL*RSQEVT
Trigger: TGTCACCTCCTGTGACCTCCACAACCTCAGCTGCTT...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAATGTCCCACAATGCAGTaGGCCGCAAGGAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKCPTMQ*AARSLS
Trigger: GCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACA...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAACCTGGTACATTCCGTTaGTTCACCTCTTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKPGTFR*FTSSRL
Trigger: GAGGCGAGAAGAGGTGAATCAACGGAATGTACCAGG...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAATTCCTGTGGCACATATaGGGACTCTCCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKFLWHI*GLSIAL
Trigger: CAGGGCAATGGAGAGTCCTCATATGTGCCACAGGAA...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCGATAGATCCCATTCCTaGCATCTTCAAGGAATTTAT +
Preference number: 4 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFDRSHS*HLQGIY
Trigger: ATAAATTCCTTGAAGATGTCAGGAATGGGATCTATC...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTGTAGATTCTTCTaGTCTTCTCGACAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNKCRFF*SSRQVF
Trigger: GAAGACTTGTCGAGAAGAGCAGAAGAATCTACACTT...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCTGCTAAGTACTGTCTaGGACTCCCCCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRELLSTV*DSPSDM
Trigger: CATGTCGGAGGGGGAGTCCCAGACAGTACTTAGCAG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAAAGTTCTCTGGCTGTTaGTCTGCGAGCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKKFSGC*SASRLR
Trigger: TCTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTT...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGTATTACAGCAGCAACTaGGGCGAATCGAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREYYSSN*GESNGP
Trigger: GGGGCCATTCGATTCGCCTCAGTTGCTGCTGTAATA...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAACACTGCCATCTCCAGTaGACACATGCCAAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKHCHLQ*THAKGV
Trigger: TACTCCTTTGGCATGTGTGCACTGGAGATGGCAGTG...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGACTCAATGTTGCACTaGATCAGCACCACCTTGCGA +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKDSMLH*ISTTLR
Trigger: TCGCAAGGTGGTGCTGATGCAGTGCAACATTGAGTC...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCCACCGACTCAATGTTaGACTGCATCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREPPTQC*TASAPP
Trigger: AGGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGAGTCTCCACCTCAGCTaGTTCAGGTGTCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRESLHLS*FRCRSL
Trigger: AAGACTCCGACACCTGAACCAGCTGAGGTGGAGACT...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGGGGGATATTCTCATTTaGCATCAGGTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVGDILI*HQVTAQ
Trigger: CTGAGCTGTGACCTGATGCCAAATGAGAATATCCCC...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGCAGGCACTTTTGAATaGACTCCCTCTGTAATGGGT +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKAGTFE*TPSVMG
Trigger: ACCCATTACAGAGGGAGTTCATTCAAAAGTGCCTGC...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAATCTCCAGTGCACACATaGCAAAGGAGTAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKSPVHT*QRSRCP
Trigger: TGGACATCTACTCCTTTGGCATGTGTGCACTGGAGA...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCTGAATCTCCAGCACTaGCATCTCCAGTGCACACAT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRELNLQH*HLQCTH
Trigger: ATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGTCAAACAATGCTGGGTaGAACAGAAGTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVSNNAG*NRSSLA
Trigger: AGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGA...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTACAAAGTCTGAACTaGTTCTCTTCCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKVQSLN*FSSWSC
Trigger: GCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTAC...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGGAAGTCAACCGGCTCTaGTCAGCCTCACTAATGAAG +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREEVNRL*SASLMK
Trigger: CTTCATTAGTGAGGCTGACCAGAGCCGGTTGACTTC...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGACTGCAGGCACTTTTaGATGAACTCCCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKDCRHF*MNSLCN
Trigger: ATTACAGAGGGAGTTCATTCAAAAGTGCCTGCAGTC...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGGAGTAGATGTCCACTaGTGTTGTCACATTAGTGAC +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKGVDVH*CCHISD
Trigger: GTCACTAATGTGACAACAGCAGTGGACATCTACTCC...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGGGGCACTTCAAACAATaGTGGGTGGAACAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREGHFKQ*WVEQKF
Trigger: GAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCC...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGTGCACTGTCAATACCTaGTACATTCCGTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVCTVNT*YIPLIH
Trigger: GTGAATCAACGGAATGTACCAGGTATTGACAGTGCA...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR GCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCCAGGCCCACGTCTGTaGAAAACAAGTAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREPGPRL*KTSKQS
Trigger: ACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAACACTTCAAACAATGCTaGGTGGAACAGAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKHFKQC*VEQKFS
Trigger: AGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTG...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCGACAAGTCTTCACATaGTTGTTGATAGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRERQVFT*LLIVSG
Trigger: TCCTGACACTATCAACAATCATGTGAAGACTTGTCG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAATGTTCCTGGCAAAATTaGACTTGTTCAAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKCSWQN*TCSRSL
Trigger: AAGAGACCTTGAACAAGTTCAATTTTGCCAGGAACA...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGTGCACTGTCAATACCTaGTACATTCCGTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRECTVNT*YIPLIH
Trigger: GTGAATCAACGGAATGTACCAGGTATTGACAGTGCA...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCACTTCAAACAATGCTaGGTGGAACAGAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREHFKQC*VEQKFS
Trigger: AGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR TCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGTGTTCCTGGCAAAATTaGACTTGTTCAAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRECSWQN*TCSRSL
Trigger: AAGAGACCTTGAACAAGTTCAATTTTGCCAGGAACA...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CCA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGTCATTCATCGTCTTGTaGTTCTTTTTGGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRESFIVL*FFLVFF
Trigger: GAAGAAGACCAAAAAGAACCACAAGACGATGAATGA...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS CCA 90 bp TGGGTGACGTTCTGGGTGGGCGGGGCCCGGCCCTCGGGCGTTCGCTaGGGTGGGCTTCCACCCGCTCTCCTCCCCTTGCGCCGGTCCGGC +
Preference number: 5 (lower is better)
Translates to: WVTFWVGGARPSGVR*GGLPPALLPLRRSG
Trigger: GCCGGACCGGCGCAAGGGGAGGAGAGCGGGTGGAAGCCCACCCCAGCGAACGCCCGAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS CCA 90 bp CCCGGACCAACGATGGGCGGTGCCGCACCGCCGGCAGGTTTCCATTaGGTGACGTTCTGGGTGGGCGGGGCCCGGCCCTCGGGCGTTCGC +
Preference number: 5 (lower is better)
Translates to: PGPTMGGAAPPAGFH*VTFWVGGARPSGVR
Trigger: GCGAACGCCCGAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGTTGGTCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS TCA 90 bp GACCAACGATGGGCGGTGCCGCACCGCCGGCAGGTTTCCATTGGGTaGCGTTCTGGGTGGGCGGGGCCCGGCCCTCGGGCGTTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: DQRWAVPHRRQVSIG*RSGWAGPGPRAFAG
Trigger: CCCAGCGAACGCCCGAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGTTGGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS GCA 90 bp AACTGCGGGCCCCGCCCTCGCGGCGCCCGGACCAACGATGGGCGGTaGCGCACCGCCGGCAGGTTTCCATTGGGTGACGTTCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: NCGPRPRGARTNDGR*RTAGRFPLGDVLGG
Trigger: CCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGTTGGTCCGGGCGCCGCGAGGGCGGGGCCCGCAGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS GCA 90 bp ATCACAGCGACTCCCTCACAGCTGCGCTCCGCAGCGCAACCGAACTaGGGGCCCCGCCCTCGCGGCGCCCGGACCAACGATGGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: ITATPSQLRSAAQPN*GPRPRGARTNDGRC
Trigger: GCACCGCCCATCGTTGGTCCGGGCGCCGCGAGGGCGGGGCCCGCAGTTCGGTTGCGCTGCGGAGCGCAGCTGTGAGGGAGTCGCTGTGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS CCA 90 bp ATGGGCGGTGCCGCACCGCCGGCAGGTTTCCATTGGGTGACGTTCTaGGTGGGCGGGGCCCGGCCCTCGGGCGTTCGCTGGGGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: MGGAAPPAGFHWVTF*VGGARPSGVRWGGL
Trigger: AAGCCCACCCCAGCGAACGCCCGAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CAA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCCCGCTCTCCTCCCCTaGCGCCGGTCCGGCCGAGAC +
Preference number: 5 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLPALLP*RRSGRD
Trigger: GTCTCGGCCGGACCGGCGCAAGGGGAGGAGAGCGGG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS GCA 90 bp GGAACCCGGCCCCTAGAATTTCACACTCCAACAGGTCGCATGCCCTaGGTCTGGAAGGCAGCCGCGGCCCGCGCGGGAACCAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTRPLEFHTPTGRMP*VWKAAAARAGTRLG
Trigger: CCCCAGCCTGGTTCCCGCGCGGGCCGCGGCTGCCTTCCAGACGCAGGGCATGCGACCTGTTGGAGTGTGAAATTCTAGGGGCCGGGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419281.6
CDS GCA 90 bp CCAGCTGGGGCTCGTCTCTCTGTCCACCCCACCGCCCGGTCCAGGTaGCCCAGATGGTTCTGCTGGACGCAGAGAGGGCCTCCTACCTCT +
Preference number: 5 (lower is better)
Translates to: PAGARLSVHPTARSR*PRWFCWTQRGPPTS
Trigger: AGAGGTAGGAGGCCCTCTCTGCGTCCAGCAGAACCATCTGGGGCACCTGGACCGGGCGGTGGGGTGGACAGAGAGACGAGCCCCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CAA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGCCGGCAGGTTTCCATaGGGTGACGTTCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLAGRFP*GDVLGG
Trigger: CCCACCCAGAACGTCACCCAATGGAAACCTGCCGGC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS-3UTR CAA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCTCCACCGACTCAATGTaGCACTGCATCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGSTDSM*HCISTT
Trigger: GGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGGA...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGGGAAGCAGCTGAGGTaGTGGAGGTCACAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLGKQLR*WRSQEV
Trigger: CACCTCCTGTGACCTCCACAACCTCAGCTGCTTCCC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAGAAGTTCTCTGGCTGTaGGTCTGCGAGCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: VPVGLLSTQAGREPADQREVLWL*VCEQAQ
Trigger: CTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTTC...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCCTCTGGGATCATGTGTaGGTGTCCCACAATGCAGTG +
Preference number: 5 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGLWDHV*VSHNAV
Trigger: CACTGCATTGTGGGACACCAACACATGATCCCAGAG...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGTGTCAGGTGGTGTTaGACTCCCTCCTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATSVRWC*TPSSTD
Trigger: GTCGGTGGAGGAGGGAGTCAAACACCACCTGACACT...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCGAAGTTCTCTGGCTGTaGGTCTGCGAGCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGEVLWL*VCEQAQ
Trigger: CTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTTC...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGAAGTTCTCTGGCTGTaGGTCTGCGAGCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSEVLWL*VCEQAQ
Trigger: CTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTTC...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCTGCATCAGCACCACCTaGCGAGTCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGCISTT*RVSTSA
Trigger: AGCTGAGGTGGAGACTCGCAAGGTGGTGCTGATGCA...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAAGTGTCAGGTGGTGTTaGACTCCCTCCTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSSVRWC*TPSSTD
Trigger: GTCGGTGGAGGAGGGAGTCAAACACCACCTGACACT...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCCGGGGATATTCTCATTaGGCATCAGGTCACAGCTCA +
Preference number: 5 (lower is better)
Translates to: GSPSARGPPFHTGWAGAGRGYSH*ASGHSS
Trigger: TGAGCTGTGACCTGATGCCAAATGAGAATATCCCCG...GCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGGTGACAGCGGCTGAGTaGAGGGTACTGTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLVTAAE*RVLFLA
Trigger: TGCCAGGAACAGTACCCTCAACTCAGCCGCTGTCAC...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCGGGAAGCAGCTGAGGTaGTGGAGGTCACAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFGKQLR*WRSQEV
Trigger: CACCTCCTGTGACCTCCACAACCTCAGCTGCTTCCC...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGGTGCCGGTTCAGTTaGTCCTCCAACTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATRCRFS*SSNFSR
Trigger: TCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCT...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTACCTGGTACATTCCGTaGATTCACCTCTTCTCGCCT +
Preference number: 5 (lower is better)
Translates to: ARGPPFHTGWAGAGRSATTWYIP*IHLFSP
Trigger: AGGCGAGAAGAGGTGAATCAACGGAATGTACCAGGT...AGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCAGGTGCCGGTTCAGTTaGTCCTCCAACTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGRCRFS*SSNFSR
Trigger: TCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCT...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAACCTGGTACATTCCGTaGATTCACCTCTTCTCGCCT +
Preference number: 5 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSTWYIP*IHLFSP
Trigger: AGGCGAGAAGAGGTGAATCAACGGAATGTACCAGGT...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACTGGGCCGCAAGGAGTTaGAGCGAGGGCACTTCAAAC +
Preference number: 5 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNWAARS*SEGTSN
Trigger: GTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCA...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACTGCATCAGCACCACCTaGCGAGTCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNCISTT*RVSTSA
Trigger: AGCTGAGGTGGAGACTCGCAAGGTGGTGCTGATGCA...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCTCCACCGACTCAATGTaGCACTGCATCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFSTDSM*HCISTT
Trigger: GGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGGA...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCGGGGATATTCTCATTaGGCATCAGGTCACAGCTCA +
Preference number: 5 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLRGYSH*ASGHSS
Trigger: TGAGCTGTGACCTGATGCCAAATGAGAATATCCCCG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACGTGACAGCGGCTGAGTaGAGGGTACTGTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNVTAAE*RVLFLA
Trigger: TGCCAGGAACAGTACCCTCAACTCAGCCGCTGTCAC...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS GCA 90 bp TTAGGCAGGGAAGATAGGGGAAGAGGGTTTGCTCCCACGACTGCATaGACTGGGCAGCCGCCAAGGGAGCAGAGGGAGCACAAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LGREDRGRGFAPTTA*TGQPPREQREHKQS
Trigger: GCTCTGTTTGTGCTCCCTCTGCTCCCTTGGCGGCTGCCCAGTGCATGCAGTCGTGGGAGCAAACCCTCTTCCCCTATCTTCCCTGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460499.5
ENST00000493746.1
CDS-3UTR CAA 90 bp GTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGAAAAATGACCCTGGCCTaGTTCTCTTTAATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: VPVGLLSTQAGREPADQRKMTLA*FSLMSA
Trigger: GGCTGACATTAAAGAGAACAAGGCCAGGGTCATTTT...TCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS CCA 90 bp GCCTCTGAGACCCGCAGCACAGTCCAGTCGGAAATAAAACCGCTCTaGGGAGGAACCCGGCCCCTAGAATTTCACACTCCAACAGGTCGC +
Preference number: 5 (lower is better)
Translates to: ASETRSTVQSEIKPL*GGTRPLEFHTPTGR
Trigger: GCGACCTGTTGGAGTGTGAAATTCTAGGGGCCGGGTTCCTCCCCAGAGCGGTTTTATTTCCGACTGGACTGTGCTGCGGGTCTCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419281.6
CDS-3UTR CAA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCCGGGGATATTCTCATTaGGCATCAGGTCACAGCTCA +
Preference number: 5 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFRGYSH*ASGHSS
Trigger: TGAGCTGTGACCTGATGCCAAATGAGAATATCCCCG...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCTGGCAAAATTGAACTaGTTCAAGGTCTCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: GPPFHTGWAGAGRSATSPLAKLN*FKVSSS
Trigger: GCTAGAAGAGACCTTGAACAAGTTCAATTTTGCCAG...GGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS CCA 90 bp GCAGTGGGCCGCAAGGAGTTTGAGCGAGGGCACTTCAAACAATGCTaGGTGGAACAGAAGTTCTCTGGCTGTTGGTCTGCGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AVGRKEFERGHFKQC*VEQKFSGCWSASRL
Trigger: GAGCCTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS-3UTR CAA 90 bp ACAGGCTGGGCGGGAGCCGGCAGATCAGCGACTAGCCCCCAACTAGAAGGCGGCCTGGCAAAATTGAACTaGTTCAAGGTCTCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: TGWAGAGRSATSPQLEGGLAKLN*FKVSSS
Trigger: GCTAGAAGAGACCTTGAACAAGTTCAATTTTGCCAG...GCCGCCTTCTAGTTGGGGGCTAGTCGCTGATCTGCCGGCTCCCGCCCAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GGACAGGAGGGCTGCAGCACGTCCAGGGACAGCCACAGCGCAGATCAGGGCCTGCTGTTCCTGGCAAAATaGAACTTGTTCAAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: GQEGCSTSRDSHSADQGLLFLAK*NLFKVS
Trigger: AGAGACCTTGAACAAGTTCAATTTTGCCAGGAACAG...CAGGCCCTGATCTGCGCTGTGGCTGTCCCTGGACGTGCTGCAGCCCTCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCTAGTGCCCGTGGGCCTCCTTTCCACACAGGCTGGGCGGGAGCCGGCAGATCACTGTTCCTGGCAAAATaGAACTTGTTCAAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: PSARGPPFHTGWAGAGRSLFLAK*NLFKVS
Trigger: AGAGACCTTGAACAAGTTCAATTTTGCCAGGAACAG...TGATCTGCCGGCTCCCGCCCAGCCTGTGTGGAAAGGAGGCCCACGGGCACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS CCA 90 bp TGGGCCGCAAGGAGTTTGAGCGAGGGCACTTCAAACAATGCTGGGTaGAACAGAAGTTCTCTGGCTGTTGGTCTGCGAGCAGGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: WAARSLSEGTSNNAG*NRSSLAVGLRAGSD
Trigger: GTCTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 90 bp GATGAGGATTCTACCTTTGGGTCTGAGCCACTGCTAAGTACTGTCTaGGACTCCCCCTCCGACATGCTGGAAGGAACACTCAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: DEDSTFGSEPLLSTV*DSPSDMLEGTLRPP
Trigger: GGGAGGCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGGAGTCCCAGACAGTACTTAGCAGTGGCTCAGACCCAAAGGTAGAATCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGAGTGTCAGGTGGTGTTaGACTCCCTCCTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVSVRWC*TPSSTD
Trigger: GTCGGTGGAGGAGGGAGTCAAACACCACCTGACACT...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS GCA 90 bp AATGCAGTGGGCCGCAAGGAGTTTGAGCGAGGGCACTTCAAACAATaGTGGGTGGAACAGAAGTTCTCTGGCTGTTGGTCTGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NAVGRKEFERGHFKQ*WVEQKFSGCWSASR
Trigger: CCTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 90 bp GATGAGGATTCTACCTTTGGGTCTGAGCCACTGCTAAGTACTGTCTaGGACTCCCCCTCCGACATGCTGGAAGGAACACTCAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: DEDSTFGSEPLLSTV*DSPSDMLEGTLRPA
Trigger: TGCAGGCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGGAGTCCCAGACAGTACTTAGCAGTGGCTCAGACCCAAAGGTAGAATCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000356442.4
ENST00000419281.6
CDS-3UTR CAA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGGGGAAGCAGCTGAGGTaGTGGAGGTCACAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREGKQLR*WRSQEV
Trigger: CACCTCCTGTGACCTCCACAACCTCAGCTGCTTCCC...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGTCCACCGACTCAATGTaGCACTGCATCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVSTDSM*HCISTT
Trigger: GGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGGA...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS TCA 90 bp CTGCTGATGGCTTCCTGTGGCACATATGAGGACTCTCCATTGCCCTaGATCTCCAGCACTGCCATCTCCAGTGCACACATGCCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: LLMASCGTYEDSPLP*ISSTAISSAHMPKE
Trigger: CTCCTTTGGCATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAGGGCAATGGAGAGTCCTCATATGTGCCACAGGAAGCCATCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS-3UTR CAA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGTGGGCCGCAAGGAGTTaGAGCGAGGGCACTTCAAAC +
Preference number: 5 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREWAARS*SEGTSN
Trigger: GTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCA...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCTCTGGGATCATGTGTaGGTGTCCCACAATGCAGTG +
Preference number: 5 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVLWDHV*VSHNAV
Trigger: CACTGCATTGTGGGACACCAACACATGATCCCAGAG...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGTGCATCAGCACCACCTaGCGAGTCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRECISTT*RVSTSA
Trigger: AGCTGAGGTGGAGACTCGCAAGGTGGTGCTGATGCA...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp GCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGAGGTGCCGGTTCAGTTaGTCCTCCAACTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: AAAEKAQAHVCAKQVNKVRCRFS*SSNFSR
Trigger: TCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCT...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACCTGGCAAAATTGAACTaGTTCAAGGTCTCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNLAKLN*FKVSSS
Trigger: GCTAGAAGAGACCTTGAACAAGTTCAATTTTGCCAG...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS TCA 90 bp GGATCATGTGTTGGTGTCCCACAATGCAGTGGGCCGCAAGGAGTTTaGGCGAGGGCACTTCAAACAATGCTGGGTGGAACAGAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: GSCVGVPQCSGPQGV*ARALQTMLGGTEVL
Trigger: GAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACACCAACACATGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS-3UTR CAA 90 bp CGCCCCAGCGGGATTGTAGAATTCGGCTCCCCTAGTGCCCGTGGGCCTCCTTTCTTTTCATTCATCGTCTaGTGGTTCTTTTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RPSGIVEFGSPSARGPPFFSFIV*WFFLVF
Trigger: GAAGACCAAAAAGAACCACAAGACGATGAATGAAAA...GAAAGGAGGCCCACGGGCACTAGGGGAGCCGAATTCTACAATCCCGCTGGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS CCA 90 bp GGGCACTTCAAACAATGCTGGGTGGAACAGAAGTTCTCTGGCTGTTaGTCTGCGAGCAGGCTCAGACTGCAGGCACTTTTGAATGAACTC +
Preference number: 5 (lower is better)
Translates to: GHFKQCWVEQKFSGC*SASRLRLQALLNEL
Trigger: GAGTTCATTCAAAAGTGCCTGCAGTCTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS-3UTR CAA 90 bp CCCCCAACTAGAAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACTTTTCATTCATCGTCTaGTGGTTCTTTTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PPTRRRLLRRPRPTSVQNFSFIV*WFFLVF
Trigger: GAAGACCAAAAAGAACCACAAGACGATGAATGAAAA...GTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTTCTAGTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGCTCTGGGATCATGTGTaGGTGTCCCACAATGCAGTG +
Preference number: 5 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRELWDHV*VSHNAV
Trigger: CACTGCATTGTGGGACACCAACACATGATCCCAGAG...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS-3UTR CAA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGACCTGGTACATTCCGTaGATTCACCTCTTCTCGCCT +
Preference number: 5 (lower is better)
Translates to: QAHVCAKQVNKVQRGGRETWYIP*IHLFSP
Trigger: AGGCGAGAAGAGGTGAATCAACGGAATGTACCAGGT...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS TCA 90 bp GGGCGCTATTCAGAACAGATGACTCCAGACTCCAAAATGTTTCAGTaGGACAGCCTTAAGGCTAGACCTGTAGCACCCTCAGCCAACTTA +
Preference number: 5 (lower is better)
Translates to: GRYSEQMTPDSKMFQ*DSLKARPVAPSANL
Trigger: TAAGTTGGCTGAGGGTGCTACAGGTCTAGCCTTAAGGCTGTCTCACTGAAACATTTTGGAGTCTGGAGTCATCTGTTCTGAATAGCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356442.4
CDS CCA 90 bp TCAGACCCTCTCAGTTACTCACAAAGTCTGAACTGGTTCTCTTCCTaGTCCTGCAGGGATTTCAGCCAGTACGGCACTAGTATCCATGTT +
Preference number: 5 (lower is better)
Translates to: SDPLSYSQSLNWFSS*SCRDFSQYGTSIHV
Trigger: AACATGGATACTAGTGCCGTACTGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTGAGTAACTGAGAGGGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486701.1
CDS-3UTR CAA 90 bp CAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCAGAGGGGAGGAAGAGAGAAAATGACCCTGGCCTaGTTCTCTTTAATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: QAHVCAKQVNKVQRGGREKMTLA*FSLMSA
Trigger: GGCTGACATTAAAGAGAACAAGGCCAGGGTCATTTT...CTCTCTTCCTCCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS GCA 90 bp ATTCCACACAACCTCTACACCTTCCTCTGTATCCATGGCCAGGTATaGACTGTCAATACCTGGTACATTCCGTTGATTCACCTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: IPHNLYTFLCIHGQV*TVNTWYIPLIHLFS
Trigger: CGAGAAGAGGTGAATCAACGGAATGTACCAGGTATTGACAGTGCATACCTGGCCATGGATACAGAGGAAGGTGTAGAGGTTGTGTGGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000419281.6
CDS GCA 90 bp CCTCTCAGTTACTCACAAAGTCTGAACTGGTTCTCTTCCTGGTCCTaGAGGGATTTCAGCCAGTACGGCACTAGTATCCATGTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: PLSYSQSLNWFSSWS*RDFSQYGTSIHVFG
Trigger: ACCAAAAACATGGATACTAGTGCCGTACTGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTGAGTAACTGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486701.1
CDS TCA 90 bp AGCCTTAAGGCTAGACCTGTAGCACCCTCAGCCAACTTATCCAGCTaGAACCCTTGGCTAATTTATCCAGCTAGAACTAACCTTGGCATT +
Preference number: 5 (lower is better)
Translates to: SLKARPVAPSANLSS*NPWLIYPARTNLGI
Trigger: AATGCCAAGGTTAGTTCTAGCTGGATAAATTAGCCAAGGGTTTCAGCTGGATAAGTTGGCTGAGGGTGCTACAGGTCTAGCCTTAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356442.4
CDS TCA 90 bp GAACCAGGACCAGGCCCAATTTGGACTCACTCAGATCATAAACAATaGCTACAAGTCACAGAGAATCTGGGAGCACAGTATGATCTGGGA +
Preference number: 5 (lower is better)
Translates to: EPGPGPIWTHSDHKQ*LQVTENLGAQYDLG
Trigger: TCCCAGATCATACTGTGCTCCCAGATTCTCTGTGACTTGTAGTCATTGTTTATGATCTGAGTGAGTCCAAATTGGGCCTGGTCCTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460499.5
CDS CCA 90 bp ACTGTACCTCATTCCACACAACCTCTACACCTTCCTCTGTATCCATaGCCAGGTATGCACTGTCAATACCTGGTACATTCCGTTGATTCA +
Preference number: 5 (lower is better)
Translates to: TVPHSTQPLHLPLYP*PGMHCQYLVHSVDS
Trigger: TGAATCAACGGAATGTACCAGGTATTGACAGTGCATACCTGGCCATGGATACAGAGGAAGGTGTAGAGGTTGTGTGGAATGAGGTACAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000419281.6
CDS CCA 90 bp ACAGAGAAAAGTTGTGAGCGATGGAGCAGCCAAGCCCCAGACAAATaGACACACAAATACCACACAGACACAGCACACAGAAATGTTGTA +
Preference number: 5 (lower is better)
Translates to: TEKSCERWSSQAPDK*THKYHTDTAHRNVV
Trigger: TACAACATTTCTGTGTGCTGTGTCTGTGTGGTATTTGTGTGTCCATTTGTCTGGGGCTTGGCTGCTCCATCGCTCACAACTTTTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460499.5
CDS-3UTR CAA 90 bp AAGGCGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAATTTTCATTCATCGTCTaGTGGTTCTTTTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: KAAAEKAQAHVCAKQVNKFSFIV*WFFLVF
Trigger: GAAGACCAAAAAGAACCACAAGACGATGAATGAAAA...TTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
CDS CCA 72 bp CTGCGGGCCCCGCCCTCGCGGCGCCCGGACCAACGATaGGCGGTGCCGCACCGCCGGCAGGTTTCCATTGGG +
Preference number: 6 (lower is better)
Translates to: LRAPPSRRPDQR*AVPHRRQVSIG
Trigger: CCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGTTGGTCCGGGCGCCGCGAGGGCGGGGCCCGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS TCA 72 bp TGGGCGGTGCCGCACCGCCGGCAGGTTTCCATTGGGTaGCGTTCTGGGTGGGCGGGGCCCGGCCCTCGGGCG +
Preference number: 6 (lower is better)
Translates to: WAVPHRRQVSIG*RSGWAGPGPRA
Trigger: CGCCCGAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS CCA 72 bp TTCTGGGTGGGCGGGGCCCGGCCCTCGGGCGTTCGCTaGGGTGGGCTTCCACCCGCTCTCCTCCCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: FWVGGARPSGVR*GGLPPALLPLR
Trigger: GCGCAAGGGGAGGAGAGCGGGTGGAAGCCCACCCCAGCGAACGCCCGAGGGCCGGGCCCCGCCCACCCAGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS CAA 90 bp GCCCGGACCAACGATGGGCGGTGCCGCACCGCCGGCAGGTTTCCATaGGGTGACGTTCTGGGTGGGCGGGGCCCGGCCCTCGGGCGTTCG +
Preference number: 6 (lower is better)
Translates to: ARTNDGRCRTAGRFP*GDVLGGRGPALGRS
Trigger: CGAACGCCCGAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGTTGGTCCGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS GCA 72 bp CCCCGCCCTCGCGGCGCCCGGACCAACGATGGGCGGTaGCGCACCGCCGGCAGGTTTCCATTGGGTGACGTT +
Preference number: 6 (lower is better)
Translates to: PRPRGARTNDGR*RTAGRFPLGDV
Trigger: AACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGTTGGTCCGGGCGCCGCGAGGGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS GCA 72 bp ACTCCCTCACAGCTGCGCTCCGCAGCGCAACCGAACTaGGGGCCCCGCCCTCGCGGCGCCCGGACCAACGAT +
Preference number: 6 (lower is better)
Translates to: TPSQLRSAAQPN*GPRPRGARTND
Trigger: ATCGTTGGTCCGGGCGCCGCGAGGGCGGGGCCCGCAGTTCGGTTGCGCTGCGGAGCGCAGCTGTGAGGGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS CCA 72 bp ACGATGGGCGGTGCCGCACCGCCGGCAGGTTTCCATTaGGTGACGTTCTGGGTGGGCGGGGCCCGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: TMGGAAPPAGFH*VTFWVGGARPS
Trigger: CGAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS CAA 72 bp AACGATGGGCGGTGCCGCACCGCCGGCAGGTTTCCATaGGGTGACGTTCTGGGTGGGCGGGGCCCGGCCCTC +
Preference number: 6 (lower is better)
Translates to: NDGRCRTAGRFP*GDVLGGRGPAL
Trigger: GAGGGCCGGGCCCCGCCCACCCAGAACGTCACCCAATGGAAACCTGCCGGCGGTGCGGCACCGCCCATCGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS GCA 72 bp GCTCGTCTCTCTGTCCACCCCACCGCCCGGTCCAGGTaGCCCAGATGGTTCTGCTGGACGCAGAGAGGGCCT +
Preference number: 6 (lower is better)
Translates to: ARLSVHPTARSR*PRWFCWTQRGP
Trigger: AGGCCCTCTCTGCGTCCAGCAGAACCATCTGGGGCACCTGGACCGGGCGGTGGGGTGGACAGAGAGACGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233557.7
CDS GCA 72 bp CCCCTAGAATTTCACACTCCAACAGGTCGCATGCCCTaGGTCTGGAAGGCAGCCGCGGCCCGCGCGGGAACC +
Preference number: 6 (lower is better)
Translates to: PLEFHTPTGRMP*VWKAAAARAGT
Trigger: GGTTCCCGCGCGGGCCGCGGCTGCCTTCCAGACGCAGGGCATGCGACCTGTTGGAGTGTGAAATTCTAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419281.6
CDS CCA 72 bp GAATTTCACACTCCAACAGGTCGCATGCCCTGCGTCTaGAAGGCAGCCGCGGCCCGCGCGGGAACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: EFHTPTGRMPCV*KAAAARAGTRL
Trigger: CAGCCTGGTTCCCGCGCGGGCCGCGGCTGCCTTCCAGACGCAGGGCATGCGACCTGTTGGAGTGTGAAATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419281.6
CDS GCA 72 bp GGCACGACAGGTGATGTCACCTCCTCCTGCTGTGGCTaGTGGGGCCGAGGCAGCCCAAAGGCTGTCAGAGGA +
Preference number: 6 (lower is better)
Translates to: GTTGDVTSSCCG*WGRGSPKAVRG
Trigger: TCCTCTGACAGCCTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGAGGTGACATCACCTGTCGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
ENST00000486701.1
CDS GCA 72 bp AACCGGCTCTGGTCAGCCTCACTAATGAAGCCCAGCTaGACCAGCTCAGCCGCCAACTCGGGGATATTCTCA +
Preference number: 6 (lower is better)
Translates to: NRLWSASLMKPS*TSSAANSGIFS
Trigger: TGAGAATATCCCCGAGTTGGCGGCTGAGCTGGTGCAGCTGGGCTTCATTAGTGAGGCTGACCAGAGCCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 72 bp ACCCGCAGCACAGTCCAGTCGGAAATAAAACCGCTCTaGGGAGGAACCCGGCCCCTAGAATTTCACACTCCA +
Preference number: 6 (lower is better)
Translates to: TRSTVQSEIKPL*GGTRPLEFHTP
Trigger: TGGAGTGTGAAATTCTAGGGGCCGGGTTCCTCCCCAGAGCGGTTTTATTTCCGACTGGACTGTGCTGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419281.6
CDS CAA 72 bp AGGTGGTGTTTGACTCCCTCCTCCACCGACTCAATGTaGCACTGCATCAGCACCACCTTGCGAGTCTCCACC +
Preference number: 6 (lower is better)
Translates to: RWCLTPSSTDSM*HCISTTLRVST
Trigger: GGTGGAGACTCGCAAGGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGGAGGAGGGAGTCAAACACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
ENST00000486701.1
CDS TCA 72 bp CTGGATGGCACTGCTGATGGCTTCCTGTGGCACATATaGGGACTCTCCATTGCCCTGAATCTCCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: LDGTADGFLWHI*GLSIALNLQHC
Trigger: GCAGTGCTGGAGATTCAGGGCAATGGAGAGTCCTCATATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS TCA 72 bp GTTGGTGTCCCACAATGCAGTGGGCCGCAAGGAGTTTaGGCGAGGGCACTTCAAACAATGCTGGGTGGAACA +
Preference number: 6 (lower is better)
Translates to: VGVPQCSGPQGV*ARALQTMLGGT
Trigger: TGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 72 bp TCTACCTTTGGGTCTGAGCCACTGCTAAGTACTGTCTaGGACTCCCCCTCCGACATGCTGGAAGGAACACTC +
Preference number: 6 (lower is better)
Translates to: STFGSEPLLSTV*DSPSDMLEGTL
Trigger: GAGTGTTCCTTCCAGCATGTCGGAGGGGGAGTCCCAGACAGTACTTAGCAGTGGCTCAGACCCAAAGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233557.7
ENST00000356442.4
ENST00000379852.8
ENST00000379863.7
ENST00000419281.6
CDS CAA 72 bp TGTTGGTGTCCCACAATGCAGTGGGCCGCAAGGAGTTaGAGCGAGGGCACTTCAAACAATGCTGGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: CWCPTMQWAARS*SEGTSNNAGWN
Trigger: GTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS TCA 72 bp GCTTCCTGTGGCACATATGAGGACTCTCCATTGCCCTaGATCTCCAGCACTGCCATCTCCAGTGCACACATG +
Preference number: 6 (lower is better)
Translates to: ASCGTYEDSPLP*ISSTAISSAHM
Trigger: CATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAGGGCAATGGAGAGTCCTCATATGTGCCACAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 72 bp CGCAAGGAGTTTGAGCGAGGGCACTTCAAACAATGCTaGGTGGAACAGAAGTTCTCTGGCTGTTGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: RKEFERGHFKQC*VEQKFSGCWSA
Trigger: CGCAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 72 bp TTCTCTGGGATCATGTGTTGGTGTCCCACAATGCAGTaGGCCGCAAGGAGTTTGAGCGAGGGCACTTCAAAC +
Preference number: 6 (lower is better)
Translates to: FSGIMCWCPTMQ*AARSLSEGTSN
Trigger: GTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACACCAACACATGATCCCAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CAA 72 bp CTTGGCATCAGGTCACAGCTCAGGTGCCGGTTCAGTTaGTCCTCCAACTTCAGCAGAAGTGTCAGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: LGIRSQLRCRFS*SSNFSRSVRWC
Trigger: ACACCACCTGACACTTCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCTGAGCTGTGACCTGATGCCAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486701.1
CDS CAA 90 bp GGGATCATGTGTTGGTGTCCCACAATGCAGTGGGCCGCAAGGAGTTaGAGCGAGGGCACTTCAAACAATGCTGGGTGGAACAGAAGTTCT +
Preference number: 6 (lower is better)
Translates to: GIMCWCPTMQWAARS*SEGTSNNAGWNRSS
Trigger: AGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGCATTGTGGGACACCAACACATGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS TCA 72 bp GGGCAGAGGGAGCTCTCACCATTAGCAAAAATCCTATaGAAGACTGTTGGGAACAGAGCAGCCCGTAAGCGG +
Preference number: 6 (lower is better)
Translates to: GQRELSPLAKIL*KTVGNRAARKR
Trigger: CCGCTTACGGGCTGCTCTGTTCCCAACAGTCTTTCATAGGATTTTTGCTAATGGTGAGAGCTCCCTCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460499.5
CDS CCA 72 bp AAACAATGCTGGGTGGAACAGAAGTTCTCTGGCTGTTaGTCTGCGAGCAGGCTCAGACTGCAGGCACTTTTG +
Preference number: 6 (lower is better)
Translates to: KQCWVEQKFSGC*SASRLRLQALL
Trigger: CAAAAGTGCCTGCAGTCTGAGCCTGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 72 bp AGGAGTTTGAGCGAGGGCACTTCAAACAATGCTGGGTaGAACAGAAGTTCTCTGGCTGTTGGTCTGCGAGCA +
Preference number: 6 (lower is better)
Translates to: RSLSEGTSNNAG*NRSSLAVGLRA
Trigger: TGCTCGCAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 72 bp CTGATGATGAGGGAGAACATGAATCCAGGAGGTAAGTaGCCAGCCAGGCAGAATCCACAGGAAACAAGCAGG +
Preference number: 6 (lower is better)
Translates to: LMMRENMNPGGK*PARQNPQETSR
Trigger: CCTGCTTGTTTCCTGTGGATTCTGCCTGGCTGGCCACTTACCTCCTGGATTCATGTTCTCCCTCATCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460499.5
ENST00000493746.1
CDS CAA 72 bp TTTGGCATCAGGTCACAGCTCAGGTGCCGGTTCAGTTaGTCCTCCAACTTCAGCAGAAGTGTCAGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: FGIRSQLRCRFS*SSNFSRSVRWC
Trigger: ACACCACCTGACACTTCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCTGAGCTGTGACCTGATGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CAA 90 bp GGTCCTGCAGGGATTTCAGCCAGTACGGCACTAGTATCCATGTTTTaGGTGATCTCCTCTAGAGCGTTCTCTGGGATCATGTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: GPAGISASTALVSMF*VISSRAFSGIMSGG
Trigger: CCCTCCAGACATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAAAACATGGATACTAGTGCCGTACTGGCTGAAATCCCTGCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486701.1
CDS CAA 90 bp GAGACGGTGACAGCGGCTGAGTTGAGGGTACTGTTCCTGGCAAAATaGAACTTGTTCAAGGTCTCTTCTAGCAGAGAAGTCAACCGGCTC +
Preference number: 6 (lower is better)
Translates to: ETVTAAELRVLFLAK*NLFKVSSSREVNRL
Trigger: GAGCCGGTTGACTTCTCTGCTAGAAGAGACCTTGAACAAGTTCAATTTTGCCAGGAACAGTACCCTCAACTCAGCCGCTGTCACCGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS TCA 72 bp CCCTCAACAGGCACAAACATATTCCCTTTCCTGTCCTaGACTACAGACCACACATGGATGCCACCTACCTCC +
Preference number: 6 (lower is better)
Translates to: PSTGTNIFPFLS*TTDHTWMPPTS
Trigger: GGAGGTAGGTGGCATCCATGTGTGGTCTGTAGTTCAGGACAGGAAAGGGAATATGTTTGTGCCTGTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460499.5
CDS CCA 72 bp AGTTGTGAGCGATGGAGCAGCCAAGCCCCAGACAAATaGACACACAAATACCACACAGACACAGCACACAGA +
Preference number: 6 (lower is better)
Translates to: SCERWSSQAPDK*THKYHTDTAHR
Trigger: TCTGTGTGCTGTGTCTGTGTGGTATTTGTGTGTCCATTTGTCTGGGGCTTGGCTGCTCCATCGCTCACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460499.5
CDS CAA 90 bp GGTCCTGCAGGGATTTCAGCCAGTACGGCACTAGTATCCATGTTTTaGGTGATCTCCTCTAGAGCGTTCTCTGGGATCATGTGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: GPAGISASTALVSMF*VISSRAFSGIMCWC
Trigger: ACACCAACACATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAAAACATGGATACTAGTGCCGTACTGGCTGAAATCCCTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CAA 90 bp ATATTCTCATTTGGCATCAGGTCACAGCTCAGGTGCCGGTTCAGTTaGTCCTCCAACTTCAGCAGAAGTGTCAGGTGGTGTTTGACTCCC +
Preference number: 6 (lower is better)
Translates to: IFSFGIRSQLRCRFS*SSNFSRSVRWCLTP
Trigger: GGGAGTCAAACACCACCTGACACTTCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCTGAGCTGTGACCTGATGCCAAATGAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CAA 90 bp GTGACAGCGGCTGAGTTGAGGGTACTGTTCCTGGCAAAATTGAACTaGTTCAAGGTCTCTTCTAGCAGAGAAGTCAACCGGCTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: VTAAELRVLFLAKLN*FKVSSSREVNRLWS
Trigger: TGACCAGAGCCGGTTGACTTCTCTGCTAGAAGAGACCTTGAACAAGTTCAATTTTGCCAGGAACAGTACCCTCAACTCAGCCGCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS TCA 72 bp TCTGTAATGGGTCTTCTAGAAGCTGGATGGCACTGCTaGTGGCTTCCTGTGGCACATATGAGGACTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SVMGLLEAGWHC*WLPVAHMRTLH
Trigger: ATGGAGAGTCCTCATATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAGCTTCTAGAAGACCCATTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS TCA 72 bp TGCCCCTTTCAGACCCTCTCAGTTACTCACAAAGTCTaGACTGGTTCTCTTCCTGGTCCTGCAGGGATTTCA +
Preference number: 6 (lower is better)
Translates to: CPFQTLSVTHKV*TGSLPGPAGIS
Trigger: TGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTGAGTAACTGAGAGGGTCTGAAAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486701.1
CDS GCA 72 bp AGGAGTGCAGGTAGCTTAGGGCAGAGAGGATTTGTGTaGACCAACGCTTCCATGCCTTTTCATTCATCGTCT +
Preference number: 6 (lower is better)
Translates to: RSAGSLGQRGFV*TNASMPFHSSS
Trigger: AGACGATGAATGAAAAGGCATGGAAGCGTTGGTGCACACAAATCCTCTCTGCCCTAAGCTACCTGCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000493746.1
CDS GCA 72 bp GGGATATTCTCATTTGGCATCAGGTCACAGCTCAGGTaGCGGTTCAGTTTGTCCTCCAACTTCAGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: GIFSFGIRSQLR*RFSLSSNFSRS
Trigger: ACTTCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCTGAGCTGTGACCTGATGCCAAATGAGAATATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS GCA 72 bp CTCCAGTGCACACATGCCAAAGGAGTAGATGTCCACTaGTGTTGTCACATTAGTGACTTCTCCATACTCTGG +
Preference number: 6 (lower is better)
Translates to: LQCTHAKGVDVH*CCHISDFSILW
Trigger: CCAGAGTATGGAGAAGTCACTAATGTGACAACAGCAGTGGACATCTACTCCTTTGGCATGTGTGCACTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS GCA 72 bp AGAGTACAAAGTCTGAACTGGTTCTCTTCCTGGTCCTaGAGGGATTTCAGCCAGTACGGCACTAGTATCCAT +
Preference number: 6 (lower is better)
Translates to: RVQSLNWFSSWS*RDFSQYGTSIH
Trigger: ATGGATACTAGTGCCGTACTGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS GCA 72 bp TACTCACAAAGTCTGAACTGGTTCTCTTCCTGGTCCTaGAGGGATTTCAGCCAGTACGGCACTAGTATCCAT +
Preference number: 6 (lower is better)
Translates to: YSQSLNWFSSWS*RDFSQYGTSIH
Trigger: ATGGATACTAGTGCCGTACTGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486701.1
CDS CCA 72 bp CTCTGTATCCATGGCCAGGTATGCACTGTCAATACCTaGTACATTCCGTTGATTCACCTCTTCTCGCCTCTT +
Preference number: 6 (lower is better)
Translates to: LCIHGQVCTVNT*YIPLIHLFSPL
Trigger: AAGAGGCGAGAAGAGGTGAATCAACGGAATGTACCAGGTATTGACAGTGCATACCTGGCCATGGATACAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000419281.6
CDS CAA 72 bp GGGATTTCAGCCAGTACGGCACTAGTATCCATGTTTTaGGTGATCTCCTCTAGAGCGTTCTCTGGGATCATG +
Preference number: 6 (lower is better)
Translates to: GISASTALVSMF*VISSRAFSGIM
Trigger: CATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAAAACATGGATACTAGTGCCGTACTGGCTGAAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
ENST00000486701.1
CDS TCA 72 bp GCTAGACCTGTAGCACCCTCAGCCAACTTATCCAGCTaGAACCCTTGGCTAATTTATCCAGCTAGAACTAAC +
Preference number: 6 (lower is better)
Translates to: ARPVAPSANLSS*NPWLIYPARTN
Trigger: GTTAGTTCTAGCTGGATAAATTAGCCAAGGGTTTCAGCTGGATAAGTTGGCTGAGGGTGCTACAGGTCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356442.4
CDS TCA 72 bp TCAGAACAGATGACTCCAGACTCCAAAATGTTTCAGTaGGACAGCCTTAAGGCTAGACCTGTAGCACCCTCA +
Preference number: 6 (lower is better)
Translates to: SEQMTPDSKMFQ*DSLKARPVAPS
Trigger: TGAGGGTGCTACAGGTCTAGCCTTAAGGCTGTCTCACTGAAACATTTTGGAGTCTGGAGTCATCTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356442.4
CDS GCA 72 bp AACCTCTACACCTTCCTCTGTATCCATGGCCAGGTATaGACTGTCAATACCTGGTACATTCCGTTGATTCAC +
Preference number: 6 (lower is better)
Translates to: NLYTFLCIHGQV*TVNTWYIPLIH
Trigger: GTGAATCAACGGAATGTACCAGGTATTGACAGTGCATACCTGGCCATGGATACAGAGGAAGGTGTAGAGGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000419281.6
CDS GCA 72 bp CAGGTACTACTTACCTTAGGGCAGAGAGGATTTGTGTaGACCAACGCTTCCATGCCTTTTCATTCATCGTCT +
Preference number: 6 (lower is better)
Translates to: QVLLTLGQRGFV*TNASMPFHSSS
Trigger: AGACGATGAATGAAAAGGCATGGAAGCGTTGGTGCACACAAATCCTCTCTGCCCTAAGGTAAGTAGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493768.5
CDS CAA 72 bp GCTGAGTTGAGGGTACTGTTCCTGGCAAAATTGAACTaGTTCAAGGTCTCTTCTAGCAGAGAAGTCAACCGG +
Preference number: 6 (lower is better)
Translates to: AELRVLFLAKLN*FKVSSSREVNR
Trigger: CCGGTTGACTTCTCTGCTAGAAGAGACCTTGAACAAGTTCAATTTTGCCAGGAACAGTACCCTCAACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233557.7
ENST00000379852.8
ENST00000379863.7
ENST00000460499.5
CDS CCA 72 bp ACAAGCAAAATAGCAAATTCAAGCATTCCCAGAGAATaGACAGTTTACAGAGCCTCAAGAGTGGTCGTGACC +
Preference number: 6 (lower is better)
Translates to: TSKIANSSIPRE*TVYRASRVVVT
Trigger: GGTCACGACCACTCTTGAGGCTCTGTAAACTGTCCATTCTCTGGGAATGCTTGAATTTGCTATTTTGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486701.1
CDS CAA 72 bp ATAAAAACACAGGCAGCCCTTCCTAATCTGGGACAATaGGAGACCTCAGGAACTTGGATAAATAAGGATAAG +
Preference number: 6 (lower is better)
Translates to: IKTQAALPNLGQ*ETSGTWINKDK
Trigger: CTTATCCTTATTTATCCAAGTTCCTGAGGTCTCCAATTGTCCCAGATTAGGAAGGGCTGCCTGTGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460499.5
CDS TCA 72 bp AAAAATATAAACTATGTGGGCGCTATTCAGAACAGATaGCTCCAGACTCCAAAATGTTTCAGTGAGACAGCC +
Preference number: 6 (lower is better)
Translates to: KNINYVGAIQNR*LQTPKCFSETA
Trigger: GGCTGTCTCACTGAAACATTTTGGAGTCTGGAGTCATCTGTTCTGAATAGCGCCCACATAGTTTATATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356442.4