Pregenerated sensors for NRAD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000233725Ensembl transcript IDs: ENST00000423211.1, ENST00000439707.6, ENST00000585327.5, ENST00000587571.5, ENST00000591799.1, ENST00000592085.1, ENST00000609808.2, ENST00000613822.4, ENST00000616953.4, ENST00000617476.1, ENST00000620454.4, ENST00000629019.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | GCAATCTCTTTCCCAAGAGAGGGAGAGGCCCCACAGGGGTCCTGCTaGGCCAGGAACCACGAAGACAAGGATTTCCAATTCCCTGTGAAC | + |
Preference number: 5 (lower is better) Translates to: AISFPREGEAPQGSC*ARNHEDKDFQFPVN Trigger: GTTCACAGGGAATTGGAAATCCTTGTCTTCGTGGTTCCTGGCTCAGCAGGACCCCTGTGGGGCCTCTCCCTCTCTTGGGAAAGAGATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000423211.1 ENST00000439707.6 ENST00000587571.5 ENST00000592085.1 ENST00000617476.1 ENST00000629019.2 |
||
CDS TCA 90 bp | CCTGCCAGGCCCAACCACATGGTGCTGCTCAGCGTCAAACCTGCATaGGTCTCCTCCCTTCCTTCTCTTAAAACCAATGAAGCTGGCCCA | + |
Preference number: 5 (lower is better) Translates to: PARPNHMVLLSVKPA*VSSLPSLKTNEAGP Trigger: TGGGCCAGCTTCATTGGTTTTAAGAGAAGGAAGGGAGGAGACTCATGCAGGTTTGACGCTGAGCAGCACCATGTGGTTGGGCCTGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439707.6 |
||
CDS TCA 90 bp | GCAATCTCTTTCCCAAGAGAGGGAGAGGCCCCACAGGGGTCCTGCTaGGCCAGGAACCACGAAGACAAGGATTTCCAATTCCCTGTGAAT | + |
Preference number: 5 (lower is better) Translates to: AISFPREGEAPQGSC*ARNHEDKDFQFPVN Trigger: ATTCACAGGGAATTGGAAATCCTTGTCTTCGTGGTTCCTGGCTCAGCAGGACCCCTGTGGGGCCTCTCCCTCTCTTGGGAAAGAGATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 |
||
CDS CCA 90 bp | TCGCCCTCAGCCGGCCAATCCCCCTTGCGCTCATCTTCTCCTCACTaGTGTAGTAAACCTTCTAGAGCAATCTCTTTCCCAAGAGAGGGA | + |
Preference number: 5 (lower is better) Translates to: SPSAGQSPLRSSSPH*CSKPSRAISFPREG Trigger: TCCCTCTCTTGGGAAAGAGATTGCTCTAGAAGGTTTACTACACCAGTGAGGAGAAGATGAGCGCAAGGGGGATTGGCCGGCTGAGGGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000423211.1 ENST00000439707.6 ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 ENST00000629019.2 |
||
CDS CCA 90 bp | CCCTCCTTGGCTTACAGATGTCCGTCATCTTACTGTGTCCACACATaGCCTTTTCTCTGCGTGTGTACCCTCTGGTGCCTCTTCCTCTTC | + |
Preference number: 5 (lower is better) Translates to: PSLAYRCPSSYCVHT*PFLCVCTLWCLFLF Trigger: GAAGAGGAAGAGGCACCAGAGGGTACACACGCAGAGAAAAGGCCATGTGTGGACACAGTAAGATGACGGACATCTGTAAGCCAAGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS CCA 90 bp | GTGCCCTGCTGGGCTCTGGGTCTGAATCTTCACAACTTTATGTCTTaGCTCTCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTTG | + |
Preference number: 5 (lower is better) Translates to: VPCWALGLNLHNFMS*LSTLCLRAWSGQSL Trigger: CAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTGTGAAGATTCAGACCCAGAGCCCAGCAGGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439707.6 ENST00000585327.5 ENST00000587571.5 ENST00000591799.1 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 ENST00000620454.4 ENST00000629019.2 |
||
CDS TCA 90 bp | GGCTTGGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCAGCTGGATaGCTTGCCATTCTTACAGAAAAACCCAGTCCTCTCATGGACCTG | + |
Preference number: 5 (lower is better) Translates to: GLVWSIFAFHRLPAG*LAILTEKPSPLMDL Trigger: CAGGTCCATGAGAGGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS GCA 90 bp | TCTCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTTGCCTTTaGTCTGCTAATCCAGCAGCTTCTGGTGGTGCAGTATATGAGAGG | + |
Preference number: 5 (lower is better) Translates to: SQHCVSGLGLVNLCL*SANPAASGGAVYER Trigger: CCTCTCATATACTGCACCACCAGAAGCTGCTGGATTAGCAGAGCAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS GCA 90 bp | CTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTTaGCTTTGCTCTGCTAATCCAGCAGCTTCTGGTGGTGCAGTATAT | + |
Preference number: 5 (lower is better) Translates to: LGSQHCVSGLGLVNL*LCSANPAASGGAVY Trigger: ATATACTGCACCACCAGAAGCTGCTGGATTAGCAGAGCAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS GCA 90 bp | CTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTTaGCTTTCATCGCCTTCCAGCTGGATGACTTGCCATTCTTACAGA | + |
Preference number: 5 (lower is better) Translates to: LGSQHCVSGLGLVNL*LSSPSSWMTCHSYR Trigger: TCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS GCA 90 bp | GGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCAGCTGGATGACTTaGCATTCTTACAGAAAAACCCAGTCCTCTCATGGACCTGTGACT | + |
Preference number: 5 (lower is better) Translates to: GLVNLCLSSPSSWMT*HSYRKTQSSHGPVT Trigger: AGTCACAGGTCCATGAGAGGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CCA 90 bp | CAACTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTaGTCAATCTTTGCCTTTGCTCTGCTAATCCAGCAGCTTCTGGTG | + |
Preference number: 5 (lower is better) Translates to: QLYVLALNTVSQGLV*SIFAFALLIQQLLV Trigger: CACCAGAAGCTGCTGGATTAGCAGAGCAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS CCA 90 bp | TCAGGGCTTGGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCAGCTaGATGACTTGCCATTCTTACAGAAAAACCCAGTCCTCTCATGGA | + |
Preference number: 5 (lower is better) Translates to: SGLGLVNLCLSSPSS*MTCHSYRKTQSSHG Trigger: TCCATGAGAGGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CCA 90 bp | CTTCACAACTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTTaGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCAGCTGGATGAC | + |
Preference number: 5 (lower is better) Translates to: LHNFMSWLSTLCLRA*SGQSLPFIAFQLDD Trigger: GTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS GCA 90 bp | ATAGGTCCTCAAGTAGTAGTGCTGGTTGAAGCTCTCAAAAACTTCTaGCTGGGAGACTGGAAGATTGGTGACACCTTGATGGAAAACAGT | + |
Preference number: 5 (lower is better) Translates to: IGPQVVVLVEALKNF*LGDWKIGDTLMENS Trigger: ACTGTTTTCCATCAAGGTGTCACCAATCTTCCAGTCTCCCAGGCAGAAGTTTTTGAGAGCTTCAACCAGCACTACTACTTGAGGACCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585327.5 |
||
CDS TCA 90 bp | CTCTCAAAAACTTCTGCCTGGGAGACTGGAAGATTGGTGACACCTTaGTGGAAAACAGTAAGACTGAATTGTACATTCAGACCAGTTCTC | + |
Preference number: 5 (lower is better) Translates to: LSKTSAWETGRLVTP*WKTVRLNCTFRPVL Trigger: GAGAACTGGTCTGAATGTACAATTCAGTCTTACTGTTTTCCATCAAGGTGTCACCAATCTTCCAGTCTCCCAGGCAGAAGTTTTTGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000620454.4 |
||
CDS GCA 90 bp | AGCAATACATCTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGCATTGGCTGATCAT | + |
Preference number: 5 (lower is better) Translates to: SNTSFSNMDLLSAER*LSFTFRFLSALADH Trigger: ATGATCAGCCAATGCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGATGTATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613822.4 |
||
CDS CCA 90 bp | CAACTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTaGTCAATCTTTGCCTATAGTTCAAGTCATAAACTGGTTACCACA | + |
Preference number: 5 (lower is better) Translates to: QLYVLALNTVSQGLV*SIFAYSSSHKLVTT Trigger: TGTGGTAACCAGTTTATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS GCA 90 bp | ATGATATTACCTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGCATTGGCTGATCAT | + |
Preference number: 5 (lower is better) Translates to: MILPFSNMDLLSAER*LSFTFRFLSALADH Trigger: ATGATCAGCCAATGCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGGTAATATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591799.1 |
||
CDS CCA 90 bp | CCACCTGTTCCAGCAATCATTGACACTCGTGATTATGATATTATTTaGTTGTTTATTTTGCCCTTCCCTGTTACCCACAGAAAGGTAGCC | + |
Preference number: 5 (lower is better) Translates to: PPVPAIIDTRDYDII*LFILPFPVTHRKVA Trigger: GGCTACCTTTCTGTGGGTAACAGGGAAGGGCAAAATAAACAACCAAATAATATCATAATCACGAGTGTCAATGATTGCTGGAACAGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423211.1 |
||
CDS CCA 90 bp | CTTCACAACTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTTaGTCTGGTCAATCTTTGCCTATAGTTCAAGTCATAAACTGGTTA | + |
Preference number: 5 (lower is better) Translates to: LHNFMSWLSTLCLRA*SGQSLPIVQVINWL Trigger: TAACCAGTTTATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS GCA 90 bp | AATATTTATCCTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGCATTGGCTGATCAT | + |
Preference number: 5 (lower is better) Translates to: NIYPFSNMDLLSAER*LSFTFRFLSALADH Trigger: ATGATCAGCCAATGCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGGATAAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616953.4 |
||
CDS CCA 90 bp | CAAAAGTCAAGGCAATTGATGAAACACAGTCAGATCGTAACACCCTaGTCTTTTGCTAACATTCACACAACTCCTACTGGAATAGTGGAA | + |
Preference number: 5 (lower is better) Translates to: QKSRQLMKHSQIVTP*SFANIHTTPTGIVE Trigger: TTCCACTATTCCAGTAGGAGTTGTGTGAATGTTAGCAAAAGACCAGGGTGTTACGATCTGACTGTGTTTCATCAATTGCCTTGACTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423211.1 |
||
CDS TCA 90 bp | GAAAGAATATTCCTTTGGGTTGTATATTGTCTTCTAGGGCCACCATaGCAAAATACCACGACTGGGGGATTTAAACAACACCAGTTCATT | + |
Preference number: 5 (lower is better) Translates to: ERIFLWVVYCLLGPP*QNTTTGGFKQHQFI Trigger: AATGAACTGGTGTTGTTTAAATCCCCCAGTCGTGGTATTTTGTCATGGTGGCCCTAGAAGACAATATACAACCCAAAGGAATATTCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS TCA 90 bp | ACAAAAGAAACCATTGAGGGCATTTGCTTTGCTGAACTGATGAGATaGATGATTAATTGTCTGGAATTCAGCTTCCTGGAGAGGCAAATG | + |
Preference number: 5 (lower is better) Translates to: TKETIEGICFAELMR*MINCLEFSFLERQM Trigger: CATTTGCCTCTCCAGGAAGCTGAATTCCAGACAATTAATCATTCATCTCATCAGTTCAGCAAAGCAAATGCCCTCAATGGTTTCTTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS GCA 90 bp | AATATTTATCCTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGATCATGGTGGAAAA | + |
Preference number: 5 (lower is better) Translates to: NIYPFSNMDLLSAER*LSFTFRFLSDHGGK Trigger: TTTTCCACCATGATCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGGATAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609808.2 |
||
CDS TCA 90 bp | CCTGTGAATGAGTTGCTATCTTCTGTAGATTTGGTCTTCATAGCTTaGATCTTTGAGAATATTTATCCTTTCTCCAACATGGACTTGCTC | + |
Preference number: 5 (lower is better) Translates to: PVNELLSSVDLVFIA*IFENIYPFSNMDLL Trigger: GAGCAAGTCCATGTTGGAGAAAGGATAAATATTCTCAAAGATTCAAGCTATGAAGACCAAATCTACAGAAGATAGCAACTCATTCACAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609808.2 ENST00000616953.4 |
||
CDS GCA 72 bp | AGCCTCGAGTGCCTGCCAGGCCCAACCACATGGTGCTaGTCAGCGTCAAACCTGCATGAGTCTCCTCCCTTC | + |
Preference number: 6 (lower is better) Translates to: SLECLPGPTTWC*SASNLHESPPF Trigger: GAAGGGAGGAGACTCATGCAGGTTTGACGCTGAGCAGCACCATGTGGTTGGGCCTGGCAGGCACTCGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439707.6 |
||
CDS GCA 72 bp | TCTGGATTCAAACCAAGACCTAAAGCCTCGAGTGCCTaGCAGGCCCAACCACATGGTGCTGCTCAGCGTCAA | + |
Preference number: 6 (lower is better) Translates to: SGFKPRPKASSA*QAQPHGAAQRQ Trigger: TTGACGCTGAGCAGCACCATGTGGTTGGGCCTGGCAGGCACTCGAGGCTTTAGGTCTTGGTTTGAATCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439707.6 |
||
CDS CAA 72 bp | CCAGTCTTGATTTCGCCCTCAGCCGGCCAATCCCCCTaGCGCTCATCTTCTCCTCACTGGTGTAGTAAACCT | + |
Preference number: 6 (lower is better) Translates to: PVLISPSAGQSP*RSSSPHWCSKP Trigger: AGGTTTACTACACCAGTGAGGAGAAGATGAGCGCAAGGGGGATTGGCCGGCTGAGGGCGAAATCAAGACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000423211.1 ENST00000439707.6 ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 ENST00000629019.2 |
||
CDS CAA 90 bp | CACTTGGCTCCAGTCTTGATTTCGCCCTCAGCCGGCCAATCCCCCTaGCGCTCATCTTCTCCTCACTGGTGTAGTAAACCTTCTAGAGCA | + |
Preference number: 6 (lower is better) Translates to: HLAPVLISPSAGQSP*RSSSPHWCSKPSRA Trigger: TGCTCTAGAAGGTTTACTACACCAGTGAGGAGAAGATGAGCGCAAGGGGGATTGGCCGGCTGAGGGCGAAATCAAGACTGGAGCCAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000423211.1 ENST00000439707.6 ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 ENST00000629019.2 |
||
CDS GCA 72 bp | TTCACAGTTCTGGAGACTGGACCTCCAAGATCAAGGTaGAGGCAAGGCTGGTTTCTTCTGAGGTTTCCCTCC | + |
Preference number: 6 (lower is better) Translates to: FTVLETGPPRSR*RQGWFLLRFPS Trigger: GGAGGGAAACCTCAGAAGAAACCAGCCTTGCCTGCACCTTGATCTTGGAGGTCCAGTCTCCAGAACTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS CCA 72 bp | GCCGGCCAATCCCCCTTGCGCTCATCTTCTCCTCACTaGTGTAGTAAACCTTCTAGAGCAATCTCTTTCCCA | + |
Preference number: 6 (lower is better) Translates to: AGQSPLRSSSPH*CSKPSRAISFP Trigger: TGGGAAAGAGATTGCTCTAGAAGGTTTACTACACCAGTGAGGAGAAGATGAGCGCAAGGGGGATTGGCCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000423211.1 ENST00000439707.6 ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 ENST00000629019.2 |
||
CDS CCA 72 bp | GCTTACAGATGTCCGTCATCTTACTGTGTCCACACATaGCCTTTTCTCTGCGTGTGTACCCTCTGGTGCCTC | + |
Preference number: 6 (lower is better) Translates to: AYRCPSSYCVHT*PFLCVCTLWCL Trigger: GAGGCACCAGAGGGTACACACGCAGAGAAAAGGCCATGTGTGGACACAGTAAGATGACGGACATCTGTAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS CCA 72 bp | GAGACTGGACCTCCAAGATCAAGGTGCAGGCAAGGCTaGTTTCTTCTGAGGTTTCCCTCCTTGGCTTACAGA | + |
Preference number: 6 (lower is better) Translates to: ETGPPRSRCRQG*FLLRFPSLAYR Trigger: TCTGTAAGCCAAGGAGGGAAACCTCAGAAGAAACCAGCCTTGCCTGCACCTTGATCTTGGAGGTCCAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS CCA 72 bp | GTCTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTaGTCAATCTTTGCCTTTCATCGCCTTCCAGCTGGA | + |
Preference number: 6 (lower is better) Translates to: VLALNTVSQGLV*SIFAFHRLPAG Trigger: TCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CAA 72 bp | GGACCTGATGTGAGAGTTCAGCACTTGGTTCCAGCCTaGATTTCTCCCTTGGCCAGCCAATTCCCAACACCT | + |
Preference number: 6 (lower is better) Translates to: GPDVRVQHLVPA*ISPLASQFPTP Trigger: AGGTGTTGGGAATTGGCTGGCCAAGGGAGAAATCAAGGCTGGAACCAAGTGCTGAACTCTCACATCAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS GCA 72 bp | TGTGTCTCAGGGCTTGGTCTGGTCAATCTTTGCCTTTaGTCTGCTAATCCAGCAGCTTCTGGTGGTGCAGTA | + |
Preference number: 6 (lower is better) Translates to: CVSGLGLVNLCL*SANPAASGGAV Trigger: TACTGCACCACCAGAAGCTGCTGGATTAGCAGAGCAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS GCA 72 bp | CAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTTaGCTTTGCTCTGCTAATCCAGCAGCTTCTGGTGGT | + |
Preference number: 6 (lower is better) Translates to: QHCVSGLGLVNL*LCSANPAASGG Trigger: ACCACCAGAAGCTGCTGGATTAGCAGAGCAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS GCA 72 bp | CAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTTaGCTTTCATCGCCTTCCAGCTGGATGACTTGCCAT | + |
Preference number: 6 (lower is better) Translates to: QHCVSGLGLVNL*LSSPSSWMTCH Trigger: ATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CAA 72 bp | CTGGGCTCTGGGTCTGAATCTTCACAACTTTATGTCTaGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTGG | + |
Preference number: 6 (lower is better) Translates to: LGSGSESSQLYV*ALNTVSQGLVW Trigger: CCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTGTGAAGATTCAGACCCAGAGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439707.6 ENST00000585327.5 ENST00000587571.5 ENST00000591799.1 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 ENST00000620454.4 ENST00000629019.2 |
||
CDS CAA 72 bp | TCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTaGCCTTTCATCGCCTTCCAGCTGGATGACTTGCCA | + |
Preference number: 6 (lower is better) Translates to: STLCLRAWSGQS*PFIAFQLDDLP Trigger: TGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CAA 90 bp | TGTGCCCTGCTGGGCTCTGGGTCTGAATCTTCACAACTTTATGTCTaGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTT | + |
Preference number: 6 (lower is better) Translates to: CALLGSGSESSQLYV*ALNTVSQGLVWSIF Trigger: AAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTGTGAAGATTCAGACCCAGAGCCCAGCAGGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439707.6 ENST00000585327.5 ENST00000587571.5 ENST00000591799.1 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 ENST00000620454.4 ENST00000629019.2 |
||
CDS CAA 90 bp | TCTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTaGCCTTTCATCGCCTTCCAGCTGGATGACTTGCCATTCTTACAG | + |
Preference number: 6 (lower is better) Translates to: SWLSTLCLRAWSGQS*PFIAFQLDDLPFLQ Trigger: CTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS TCA 72 bp | CAGCAGCAAGCGGGTTTTATCCCCTGGATAGTGTGGTaGGGTGGTTTGCTTGAAGAAGCAGCCATAGTTTGT | + |
Preference number: 6 (lower is better) Translates to: QQQAGFIPWIVW*GGLLEEAAIVC Trigger: ACAAACTATGGCTGCTTCTTCAAGCAAACCACCTCACCACACTATCCAGGGGATAAAACCCGCTTGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS TCA 72 bp | CCCAACCACATGGTGCTGCTCAGCGTCAAACCTGCATaGGTCTCCTCCCTTCCTTCTCTTAAAACCAATGAA | + |
Preference number: 6 (lower is better) Translates to: PNHMVLLSVKPA*VSSLPSLKTNE Trigger: TTCATTGGTTTTAAGAGAAGGAAGGGAGGAGACTCATGCAGGTTTGACGCTGAGCAGCACCATGTGGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439707.6 |
||
CDS CAA 90 bp | TGGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCAGCTGGATGACTaGCCATTCTTACAGAAAAACCCAGTCCTCTCATGGACCTGTGAC | + |
Preference number: 6 (lower is better) Translates to: WSGQSLPFIAFQLDD*PFLQKNPVLSWTCD Trigger: GTCACAGGTCCATGAGAGGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS TCA 72 bp | TCATGTGCCCACTACTGCATCCCCTTTCCTTTAAAGTaGGTCCCTAACTCTGAGGCCAGTATGAGTCATTCC | + |
Preference number: 6 (lower is better) Translates to: SCAHYCIPFPLK*VPNSEASMSHS Trigger: GGAATGACTCATACTGGCCTCAGAGTTAGGGACTCACTTTAAAGGAAAGGGGATGCAGTAGTGGGCACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS CCA 72 bp | GGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCAGCTaGATGACTTGCCATTCTTACAGAAAAACCCAGTCC | + |
Preference number: 6 (lower is better) Translates to: GLVNLCLSSPSS*MTCHSYRKTQS Trigger: GGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CCA 72 bp | TTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTTaGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: FMSWLSTLCLRA*SGQSLPFIAFQ Trigger: CTGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CAA 72 bp | CTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTaGGTCTGGTCAATCTTTGCCTTTCATCGCCTTCCA | + |
Preference number: 6 (lower is better) Translates to: LYVLALNTVSQG*VWSIFAFHRLP Trigger: TGGAAGGCGATGAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CAA 90 bp | TCTTCACAACTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTaGGTCTGGTCAATCTTTGCCTTTGCTCTGCTAATCCAGCAGCTT | + |
Preference number: 6 (lower is better) Translates to: SSQLYVLALNTVSQG*VWSIFAFALLIQQL Trigger: AAGCTGCTGGATTAGCAGAGCAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTGTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS TCA 72 bp | TGGTCAATCTTTGCCTTTCATCGCCTTCCAGCTGGATaGCTTGCCATTCTTACAGAAAAACCCAGTCCTCTC | + |
Preference number: 6 (lower is better) Translates to: WSIFAFHRLPAG*LAILTEKPSPL Trigger: GAGAGGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS GCA 72 bp | ACCCTTCCTCCTTATAATGACATAAGGGGTTATAACTaGCATAACTTTGGACCGCCACCAGGGTTGGGGATT | + |
Preference number: 6 (lower is better) Translates to: TLPPYNDIRGYN*HNFGPPPGLGI Trigger: AATCCCCAACCCTGGTGGCGGTCCAAAGTTATGGCAGTTATAACCCCTTATGTCATTATAAGGAGGAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423211.1 |
||
CDS GCA 72 bp | CAAGTAGTAGTGCTGGTTGAAGCTCTCAAAAACTTCTaGCTGGGAGACTGGAAGATTGGTGACACCTTGATG | + |
Preference number: 6 (lower is better) Translates to: QVVVLVEALKNF*LGDWKIGDTLM Trigger: CATCAAGGTGTCACCAATCTTCCAGTCTCCCAGGCAGAAGTTTTTGAGAGCTTCAACCAGCACTACTACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585327.5 |
||
CDS CAA 72 bp | CTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTaGGTCTGGTCAATCTTTGCCTTTGCTCTGCTAATC | + |
Preference number: 6 (lower is better) Translates to: LYVLALNTVSQG*VWSIFAFALLI Trigger: GATTAGCAGAGCAAAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS CAA 72 bp | CAATCTTTGCCTTTCATCGCCTTCCAGCTGGATGACTaGCCATTCTTACAGAAAAACCCAGTCCTCTCATGG | + |
Preference number: 6 (lower is better) Translates to: QSLPFIAFQLDD*PFLQKNPVLSW Trigger: CCATGAGAGGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS GCA 72 bp | CCTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGCATTG | + |
Preference number: 6 (lower is better) Translates to: PFSNMDLLSAER*LSFTFRFLSAL Trigger: CAATGCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591799.1 ENST00000616953.4 |
||
CDS GCA 72 bp | AATCTTTGCCTTTCATCGCCTTCCAGCTGGATGACTTaGCATTCTTACAGAAAAACCCAGTCCTCTCATGGA | + |
Preference number: 6 (lower is better) Translates to: NLCLSSPSSWMT*HSYRKTQSSHG Trigger: TCCATGAGAGGACTGGGTTTTTCTGTAAGAATGGCAAGTCATCCAGCTGGAAGGCGATGAAAGGCAAAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629019.2 |
||
CDS CCA 72 bp | GTCTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTaGTCAATCTTTGCCTATAGTTCAAGTCATAAACTG | + |
Preference number: 6 (lower is better) Translates to: VLALNTVSQGLV*SIFAYSSSHKL Trigger: CAGTTTATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS CCA 72 bp | CTGGTTGAAGCTCTCAAAAACTTCTGCCTGGGAGACTaGAAGATTGGTGACACCTTGATGGAAAACAGTAAG | + |
Preference number: 6 (lower is better) Translates to: LVEALKNFCLGD*KIGDTLMENSK Trigger: CTTACTGTTTTCCATCAAGGTGTCACCAATCTTCCAGTCTCCCAGGCAGAAGTTTTTGAGAGCTTCAACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585327.5 |
||
CDS CAA 72 bp | CCTATTGGAAGCAATACATCTTTCTCCAACATGGACTaGCTCAGTGCTGAACGCTGCCTTTCCTTCACCTTT | + |
Preference number: 6 (lower is better) Translates to: PIGSNTSFSNMD*LSAERCLSFTF Trigger: AAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGATGTATTGCTTCCAATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613822.4 |
||
CDS CAA 90 bp | TCTTGGCTCTCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTaGCCTATAGTTCAAGTCATAAACTGGTTACCACATAACCTTCCT | + |
Preference number: 6 (lower is better) Translates to: SWLSTLCLRAWSGQS*PIVQVINWLPHNLP Trigger: AGGAAGGTTATGTGGTAACCAGTTTATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS GCA 72 bp | ACTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGCATTG | + |
Preference number: 6 (lower is better) Translates to: TFSNMDLLSAER*LSFTFRFLSAL Trigger: CAATGCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423211.1 ENST00000439707.6 ENST00000592085.1 ENST00000629019.2 |
||
CDS GCA 72 bp | CAGTATATGAGAGGATCGGTGGATTTCTTAGTCATGTaGCCACTACTGCATCCCCTTTCCTTTAAAGTGAGT | + |
Preference number: 6 (lower is better) Translates to: QYMRGSVDFLVM*PLLHPLSFKVS Trigger: ACTCACTTTAAAGGAAAGGGGATGCAGTAGTGGGCACATGACTAAGAAATCCACCGATCCTCTCATATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585327.5 ENST00000620454.4 |
||
CDS GCA 72 bp | CCTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGATCAT | + |
Preference number: 6 (lower is better) Translates to: PFSNMDLLSAER*LSFTFRFLSDH Trigger: ATGATCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609808.2 |
||
CDS GCA 72 bp | TCTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGCATTG | + |
Preference number: 6 (lower is better) Translates to: SFSNMDLLSAER*LSFTFRFLSAL Trigger: CAATGCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613822.4 |
||
CDS GCA 72 bp | CTATTGGAAGCAATACATCTTTCTCCAACATGGACTTaGTCAGTGCTGAACGCTGCCTTTCCTTCACCTTTA | + |
Preference number: 6 (lower is better) Translates to: LLEAIHLSPTWT*SVLNAAFPSPL Trigger: TAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGATGTATTGCTTCCAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613822.4 |
||
CDS CAA 72 bp | CTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTaGGTCTGGTCAATCTTTGCCTATAGTTCAAGTCAT | + |
Preference number: 6 (lower is better) Translates to: LYVLALNTVSQG*VWSIFAYSSSH Trigger: ATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000587571.5 ENST00000591799.1 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS TCA 72 bp | TTCCTTTGGGTTGTATATTGTCTTCTAGGGCCACCATaGCAAAATACCACGACTGGGGGATTTAAACAACAC | + |
Preference number: 6 (lower is better) Translates to: FLWVVYCLLGPP*QNTTTGGFKQH Trigger: GTGTTGTTTAAATCCCCCAGTCGTGGTATTTTGTCATGGTGGCCCTAGAAGACAATATACAACCCAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS GCA 72 bp | ACTTTCTCCAACATGGACTTGCTCAGTGCTGAACGCTaGCTTTCCTTCACCTTTAGATTTCTTTCTGATCAT | + |
Preference number: 6 (lower is better) Translates to: TFSNMDLLSAER*LSFTFRFLSDH Trigger: ATGATCAGAAAGAAATCTAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587571.5 |
||
CDS CCA 72 bp | AGGCAATTGATGAAACACAGTCAGATCGTAACACCCTaGTCTTTTGCTAACATTCACACAACTCCTACTGGA | + |
Preference number: 6 (lower is better) Translates to: RQLMKHSQIVTP*SFANIHTTPTG Trigger: TCCAGTAGGAGTTGTGTGAATGTTAGCAAAAGACCAGGGTGTTACGATCTGACTGTGTTTCATCAATTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423211.1 |
||
CDS CCA 72 bp | TTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTTaGTCTGGTCAATCTTTGCCTATAGTTCAAGTCATA | + |
Preference number: 6 (lower is better) Translates to: FMSWLSTLCLRA*SGQSLPIVQVI Trigger: TATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS CCA 72 bp | ATCCATTTGTCTCTCAAAAACTTCTGCCTGGGAGACTaGAAGATTGGTGACACCTTGATGGAAAACAGTAAG | + |
Preference number: 6 (lower is better) Translates to: IHLSLKNFCLGD*KIGDTLMENSK Trigger: CTTACTGTTTTCCATCAAGGTGTCACCAATCTTCCAGTCTCCCAGGCAGAAGTTTTTGAGAGACAAATGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000620454.4 |
||
CDS CAA 72 bp | TCAACACTGTGTCTCAGGGCTTGGTCTGGTCAATCTTaGCCTATAGTTCAAGTCATAAACTGGTTACCACAT | + |
Preference number: 6 (lower is better) Translates to: STLCLRAWSGQS*PIVQVINWLPH Trigger: ATGTGGTAACCAGTTTATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS CAA 90 bp | TCTTCACAACTTTATGTCTTGGCTCTCAACACTGTGTCTCAGGGCTaGGTCTGGTCAATCTTTGCCTATAGTTCAAGTCATAAACTGGTT | + |
Preference number: 6 (lower is better) Translates to: SSQLYVLALNTVSQG*VWSIFAYSSSHKLV Trigger: AACCAGTTTATGACTTGAACTATAGGCAAAGATTGACCAGACCAAGCCCTGAGACACAGTGTTGAGAGCCAAGACATAAAGTTGTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587571.5 ENST00000592085.1 ENST00000609808.2 ENST00000613822.4 ENST00000616953.4 ENST00000617476.1 |
||
CDS CAA 90 bp | TCTCTCAAAAACTTCTGCCTGGGAGACTGGAAGATTGGTGACACCTaGATGGAAAACAGTAAGACTGAATTGTACATTCAGACCAGTTCT | + |
Preference number: 6 (lower is better) Translates to: SLKNFCLGDWKIGDT*MENSKTELYIQTSS Trigger: AGAACTGGTCTGAATGTACAATTCAGTCTTACTGTTTTCCATCAAGGTGTCACCAATCTTCCAGTCTCCCAGGCAGAAGTTTTTGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000620454.4 |
||
CDS TCA 72 bp | ACCATTGAGGGCATTTGCTTTGCTGAACTGATGAGATaGATGATTAATTGTCTGGAATTCAGCTTCCTGGAG | + |
Preference number: 6 (lower is better) Translates to: TIEGICFAELMR*MINCLEFSFLE Trigger: CTCCAGGAAGCTGAATTCCAGACAATTAATCATTCATCTCATCAGTTCAGCAAAGCAAATGCCCTCAATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS GCA 72 bp | TCTTTGAGAATATTTATCCTTTCTCCAACATGGACTTaGTCAGTGCTGAACGCTGCCTTTCCTTCACCTTTA | + |
Preference number: 6 (lower is better) Translates to: SLRIFILSPTWT*SVLNAAFPSPL Trigger: TAAAGGTGAAGGAAAGGCAGCGTTCAGCACTGAGCAAGTCCATGTTGGAGAAAGGATAAATATTCTCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609808.2 ENST00000616953.4 |
||
CDS CCA 72 bp | TTCTTCAGGGACCCTATCCCCAAATACAGTCACATTTaGTACTTGGGGTTAGCACTTCAACATATGAATTTG | + |
Preference number: 6 (lower is better) Translates to: FFRDPIPKYSHI*YLGLALQHMNL Trigger: CAAATTCATATGTTGAAGTGCTAACCCCAAGTACCAAATGTGACTGTATTTGGGGATAGGGTCCCTGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS CAA 72 bp | CTTCTTCAGGGACCCTATCCCCAAATACAGTCACATTaGGTACTTGGGGTTAGCACTTCAACATATGAATTT | + |
Preference number: 6 (lower is better) Translates to: LLQGPYPQIQSH*VLGVSTSTYEF Trigger: AAATTCATATGTTGAAGTGCTAACCCCAAGTACCAAATGTGACTGTATTTGGGGATAGGGTCCCTGAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423211.1 ENST00000439707.6 |
||
CDS CAA 72 bp | ATTGGTGACACCTTGATGGAAAACAGTAAGACTGAATaGTACATTCAGACCAGTTCTCACCATCTGAATTTG | + |
Preference number: 6 (lower is better) Translates to: IGDTLMENSKTE*YIQTSSHHLNL Trigger: CAAATTCAGATGGTGAGAACTGGTCTGAATGTACAATTCAGTCTTACTGTTTTCCATCAAGGTGTCACCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620454.4 |
||
CDS CAA 72 bp | AATTTAATGACCAACCCCCACCTGTTCCAGCAATCATaGACACTCGTGATTATGATATTATTTGGTTGTTTA | + |
Preference number: 6 (lower is better) Translates to: NLMTNPHLFQQS*TLVIMILFGCL Trigger: TAAACAACCAAATAATATCATAATCACGAGTGTCAATGATTGCTGGAACAGGTGGGGGTTGGTCATTAAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423211.1 |
||
CDS CAA 72 bp | GAAATTATAAATGGTTATTCTCAGACACAGCTTGGATaGATCCAAGACCTAGTTAACAAAGATGCTCTACAT | + |
Preference number: 6 (lower is better) Translates to: EIINGYSQTQLG*IQDLVNKDALH Trigger: ATGTAGAGCATCTTTGTTAACTAGGTCTTGGATCAATCCAAGCTGTGTCTGAGAATAACCATTTATAATTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439707.6 |