RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR6A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000148200

Ensembl transcript IDs: ENST00000344523.8, ENST00000373584.7, ENST00000416460.6, ENST00000475178.1, ENST00000487099.7

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGCCAGCTATCATTTGGTCATGGAGGGTTGATGGAGTCAGGCTaGCGGGCAGCCCTTGGCCGGCCCTTTGGAGACAAGGGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: ARQLSFGHGGLMESG*RAALGRPFGDKGSG
Trigger: CCCTGAGCCCTTGTCTCCAAAGGGCCGGCCAAGGGCTGCCCGCCAGCCTGACTCCATCAACCCTCCATGACCAAATGATAGCTGGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp CTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTaGGGCATAGGGGCTGGGTGTCCTCTGAGCCAGGTTGAGCGCTTT +
Preference number: 1 (lower is better)
Translates to: LTSSYPWGLAHLSCE*GIGAGCPLSQVERF
Trigger: AAAGCGCTCAACCTGGCTCAGAGGACACCCAGCCCCTATGCCCCACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp GTGGGTGGAGGTGGACCTAGGGCAGGTAACCTGGGGGTAGGCTCGTaGATGTGTGTGCCACTAGAGCCCTTAAAGGTGGTGTCTGTGGGA +
Preference number: 1 (lower is better)
Translates to: VGGGGPRAGNLGVGS*MCVPLEPLKVVSVG
Trigger: TCCCACAGACACCACCTTTAAGGGCTCTAGTGGCACACACATCCACGAGCCTACCCCCAGGTTACCTGCCCTAGGTCCACCTCCACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp TGGGTAGGTGGGAAGGAATCCCCAGACACAGCCCAGACATCACAATaGAGCCACCAGCCCCTATGGCAGACCTGGGATGGCAACACAGAC +
Preference number: 1 (lower is better)
Translates to: WVGGKESPDTAQTSQ*SHQPLWQTWDGNTD
Trigger: GTCTGTGTTGCCATCCCAGGTCTGCCATAGGGGCTGGTGGCTGCATTGTGATGTCTGGGCTGTGTCTGGGGATTCCTTCCCACCTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp GAGATCCAGGTAAGGAAACTAGGTAGCTGGGGGCCCCGAGGGAGCTaGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCT +
Preference number: 1 (lower is better)
Translates to: EIQVRKLGSWGPRGS*EASPVDQVIARTLP
Trigger: AGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCGGGGCCCCCAGCTACCTAGTTTCCTTACCTGGATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp CCTGGTGTAGCGCTGGCCAAAGTCAAGAGGGTAAGGAACACGTCCTaGGATAAGGTGGGGCAGGTAGTGAGAGGTCAAGGAGTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: PGVALAKVKRVRNTS*DKVGQVVRGQGVQA
Trigger: GGCCTGGACTCCTTGACCTCTCACTACCTGCCCCACCTTATCCCAGGACGTGTTCCTTACCCTCTTGACTTTGGCCAGCGCTACACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp GTGCCGTGGGCCCTTCCAACCTACCCAGGCATGCAGCCAACTAAGTaGTCTGCTTGCCACACTGGCTGTGAAAGATACCTGGGTGTAGGC +
Preference number: 1 (lower is better)
Translates to: VPWALPTYPGMQPTK*SACHTGCERYLGVG
Trigger: GCCTACACCCAGGTATCTTTCACAGCCAGTGTGGCAAGCAGACCACTTAGTTGGCTGCATGCCTGGGTAGGTTGGAAGGGCCCACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp CTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTaGTCTCTCTGGCTTTTCCCTCCAGAGCCTGTCCTGCCCACCCAA +
Preference number: 1 (lower is better)
Translates to: LAMEATGNAAPQPPS*SLWLFPPEPVLPTQ
Trigger: TTGGGTGGGCAGGACAGGCTCTGGAGGGAAAAGCCAGAGAGACCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR TCA 90 bp GTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTaGGATTCTGCAGGGCTCTCGGCAATGAATGGGCTCTTTGTTCTG +
Preference number: 1 (lower is better)
Translates to: VHRSGSGSEHTATLL*DSAGLSAMNGLFVL
Trigger: CAGAACAAAGAGCCCATTCATTGCCGAGAGCCCTGCAGAATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp ATAGGCAGAAGAAGGTGCCGTGGGCCCTTCCAACCTACCCAGGCATaGAGCCAACTAAGTGGTCTGCTTGCCACACTGGCTGTGAAAGAT +
Preference number: 1 (lower is better)
Translates to: IGRRRCRGPFQPTQA*SQLSGLLATLAVKD
Trigger: ATCTTTCACAGCCAGTGTGGCAAGCAGACCACTTAGTTGGCTGCATGCCTGGGTAGGTTGGAAGGGCCCACGGCACCTTCTTCTGCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp GTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTCTaGAGGGCTCTCGGCAATGAATGGGCTCTTTGTTCTGTGGAATCT +
Preference number: 1 (lower is better)
Translates to: VRLRLGTHSHFALRF*RALGNEWALCSVES
Trigger: AGATTCCACAGAACAAAGAGCCCATTCATTGCCGAGAGCCCTGCAGAATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 90 bp CCTGAAAAAGGGTGGCAGGTGAGAGGCAGGTTGATGTGGAGTGGGTaGCATTCAGTGATGCCACAGAAACCCTTAGGATTCCCCATTCCT +
Preference number: 1 (lower is better)
Translates to: PEKGWQVRGRLMWSG*HSVMPQKPLGFPIP
Trigger: AGGAATGGGGAATCCTAAGGGTTTCTGTGGCATCACTGAATGTCACCCACTCCACATCAACCTGCCTCTCACCTGCCACCCTTTTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp GTGGCTCAATCCTCACCTCCTACCCTGTTGCCGTCTCACCAACCTTaGTTAGTGAATCTCCTAACAACACTTTGCCCCCTTACAGTGTGC +
Preference number: 1 (lower is better)
Translates to: VAQSSPPTLLPSHQP*LVNLLTTLCPLTVC
Trigger: GCACACTGTAAGGGGGCAAAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGAGGATTGAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp GATGCCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTaGGAAACAGGACAGGGAGGATCCTGCTTACTTCCTCCTATCCCT +
Preference number: 1 (lower is better)
Translates to: DATETLRIPHSLLWF*ETGQGGSCLLPPIP
Trigger: AGGGATAGGAGGAAGTAAGCAGGATCCTCCCTGTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp TTCAGTGATGCCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTaGTTCTGGGAAACAGGACAGGGAGGATCCTGCTTACTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: FSDATETLRIPHSLL*FWETGQGGSCLLPP
Trigger: AGGAGGAAGTAAGCAGGATCCTCCCTGTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGGCATCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp CAAGGTGTGAGAACAGAAATTCTTCTGCCCTTAGGACTTGTTGGGTaGAAGGACACCTGCCTTAAATATGGTCACTGTGCCCTACTCTCT +
Preference number: 1 (lower is better)
Translates to: QGVRTEILLPLGLVG*KDTCLKYGHCALLS
Trigger: AGAGAGTAGGGCACAGTGACCATATTTAAGGCAGGTGTCCTTCCACCCAACAAGTCCTAAGGGCAGAAGAATTTCTGTTCTCACACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp TTCACCAGAAAGAAACAATTACAATCAGACATGGACTACCCAGTATaGACACGACGTGGTGCCCTCCTGGGTAGCTTTACTAGGTTGAGT +
Preference number: 1 (lower is better)
Translates to: FTRKKQLQSDMDYPV*TRRGALLGSFTRLS
Trigger: ACTCAACCTAGTAAAGCTACCCAGGAGGGCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTTCTGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp GATTCTGGGGAATTTCTCCAGATTAACGACGAGACCACCAAACCTTaGAAAGGACTCCAAAAGTCTACAAAGGCAGCCAGAGAGCATGAA +
Preference number: 1 (lower is better)
Translates to: DSGEFLQINDETTKP*KGLQKSTKAAREHE
Trigger: TTCATGCTCTCTGGCTGCCTTTGTAGACTTTTGGAGTCCTTTGCAAGGTTTGGTGGTCTCGTCGTTAATCTGGAGAAATTCCCCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp CACAGCCACTTTGCTCTGAGATTCTGCAGGGCTCTCGGCAATGAATaGGCTCTTTGTTCTGTGGAATCTGCTGCAAACATTTGTAAAACT +
Preference number: 1 (lower is better)
Translates to: HSHFALRFCRALGNE*ALCSVESAANICKT
Trigger: AGTTTTACAAATGTTTGCAGCAGATTCCACAGAACAAAGAGCCCATTCATTGCCGAGAGCCCTGCAGAATCTCAGAGCAAAGTGGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 90 bp TTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTGGCTaGCCTAATGTCTCCACGCTGCTAGCTACACTCCTACCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: FLRVLQTKFTNTSSG*PNVSTLLATLLPSP
Trigger: AGGAGAAGGTAGGAGTGTAGCTAGCAGCGTGGAGACATTAGGTCAGCCACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp ACAACTTGCTCTGTTCAATACTACGTTGTTGGAGAGACATGTTCTTaGCTCATCAGAGAGCAATTTCTTTTGACACCCAACACAACGGGT +
Preference number: 1 (lower is better)
Translates to: TTCSVQYYVVGETCS*LIREQFLLTPNTTG
Trigger: ACCCGTTGTGTTGGGTGTCAAAAGAAATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCAACAACGTAGTATTGAACAGAGCAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 90 bp ATGGCAACTTGCAGAACCTTTCCCCTACTCCACAAATTAACAACTTaGTCTGTTCAATACTACGTTGTTGGAGAGACATGTTCTTGCCTC +
Preference number: 1 (lower is better)
Translates to: MATCRTFPLLHKLTT*SVQYYVVGETCSCL
Trigger: GAGGCAAGAACATGTCTCTCCAACAACGTAGTATTGAACAGAGCAAGTTGTTAATTTGTGGAGTAGGGGAAAGGTTCTGCAAGTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 90 bp CCTACTCCACAAATTAACAACTTGCTCTGTTCAATACTACGTTGTTaGAGAGACATGTTCTTGCCTCATCAGAGAGCAATTTCTTTTGAC +
Preference number: 1 (lower is better)
Translates to: PTPQINNLLCSILRC*RDMFLPHQRAISFD
Trigger: GTCAAAAGAAATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCAACAACGTAGTATTGAACAGAGCAAGTTGTTAATTTGTGGAGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp TGGGTAGCCTGCAGAGCCCGCCAGCTATCATTTGGTCATGGAGGGTaGATGGAGTCAGGCTGGCGGGCAGCCCTTGGCCGGCCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: WVACRARQLSFGHGG*MESGWRAALGRPFG
Trigger: TCCAAAGGGCCGGCCAAGGGCTGCCCGCCAGCCTGACTCCATCAACCCTCCATGACCAAATGATAGCTGGCGGGCTCTGCAGGCTACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGACGCTGTGGTTGGCCTaGGGAGGGCGCCTGGAACAG +
Preference number: 2 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWTLWLA*GGRLEQ
Trigger: CTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR TCA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCAGCTTGGAGCAGGCTCTaGCCTTACTCACCGCCTCCC +
Preference number: 2 (lower is better)
Translates to: PMADLGWQHRQKHQHPRAAWSRL*PYSPPP
Trigger: GGGAGGCGGTGAGTAAGGTCAGAGCCTGCTCCAAGC...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp TCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTaGGTCTCTCTGGCTTTTCCCTCCAGAGCCTGTCCTGCCCACCCA +
Preference number: 2 (lower is better)
Translates to: SCYGGNGKCCSTASI*VSLAFPSRACPAHP
Trigger: TGGGTGGGCAGGACAGGCTCTGGAGGGAAAAGCCAGAGAGACCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR CAA 90 bp GGAGCAGGCTCTGACCTTACTCACCGCCTCCCTTTGAGCCTACAGTaGATTCCTGTGCAGGCTGTGGTCCATTTAGGGCTTCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GAGSDLTHRLPLSLQ*IPVQAVVHLGLQAQ
Trigger: CTGGGCCTGAAGCCCTAAATGGACCACAGCCTGCACAGGAATCAACTGTAGGCTCAAAGGGAGGCGGTGAGTAAGGTCAGAGCCTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTCGCAGTGGTAGACAATaGTGGTGGTGCAGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSRSGRQ*WWCRGK
Trigger: CTTACCCCTGCACCACCATCATTGTCTACCACTGCG...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGGGAGGCAACGGGAAATaGTGCTCCACAGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: SWEASPVDQVIARTLPRWGGNGK*CSTASI
Trigger: GATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCC...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 2 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR TCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCACGCTGTGGTTGGCCTaGGGAGGGCGCCTGGAACAG +
Preference number: 2 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLTLWLA*GGRLEQ
Trigger: CTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGT...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR TCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTACGCTGTGGTTGGCCTaGGGAGGGCGCCTGGAACAG +
Preference number: 2 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPTLWLA*GGRLEQ
Trigger: CTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGT...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR TCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGTGTGTCCTGGGTCCCTaGGGAAAACTGGTCTCACTC +
Preference number: 2 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSCVLGP*GKLVSL
Trigger: GAGTGAGACCAGTTTTCCTCAGGGACCCAGGACACA...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCTCCAGAGCCTGTCCTaGCCACCCAAGACGCTGTGG +
Preference number: 2 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASLQSLS*PPKTLW
Trigger: CCACAGCGTCTTGGGTGGGCAGGACAGGCTCTGGAG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR GCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTCCAGAGCCTGTCCTaGCCACCCAAGACGCTGTGG +
Preference number: 2 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPLQSLS*PPKTLW
Trigger: CCACAGCGTCTTGGGTGGGCAGGACAGGCTCTGGAG...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR CCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTCCAGGCTTCAGAACATaGCATTCTGCTCAGCTGGTT +
Preference number: 2 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSPGFRT*HSAQLV
Trigger: AACCAGCTGAGCAGAATGCCATGTTCTGAAGCCTGG...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGCTCCTAACAACACTTTaGCCCCTTACAGTGTGCCGT +
Preference number: 2 (lower is better)
Translates to: SWEASPVDQVIARTLPRWLLTTL*PLTVCR
Trigger: ACGGCACACTGTAAGGGGGCAAAGTGTTGTTAGGAG...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTAGTGTCTATTCTTTTTaGAGTCTGGCCTTGCCCTAC +
Preference number: 2 (lower is better)
Translates to: RSTGQAPARNTQPLCSEISVYSF*SLALPY
Trigger: GTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 2 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR CCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 2 (lower is better)
Translates to: KETITIRHGLPSMHTTWCPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp CGTGGCTCAATCCTCACCTCCTACCCTGTTGCCGTCTCACCAACCTaGCTTAGTGAATCTCCTAACAACACTTTGCCCCCTTACAGTGTG +
Preference number: 2 (lower is better)
Translates to: RGSILTSYPVAVSPT*LSESPNNTLPPYSV
Trigger: CACACTGTAAGGGGGCAAAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGAGGATTGAGCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCACTCAGCAAAGAACGATaGTGTACACAGGAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: PMADLGWQHRQKHQHPRALSKER*CTQELS
Trigger: AGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAG...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTTGTACAATGGCAACTTaGAGAACCTTTCCCCTACTC +
Preference number: 2 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSCTMAT*RTFPLL
Trigger: GAGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACA...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTCAGCCCTCCAGGCCTTaGCTGGCCAGTCCACTGCTG +
Preference number: 2 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSQPSRP*LASPLL
Trigger: CAGCAGTGGACTGGCCAGCCAAGGCCTGGAGGGCTG...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACACTCCAGAGCCTGTCCTaGCCACCCAAGACGCTGTGG +
Preference number: 2 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTLQSLS*PPKTLW
Trigger: CCACAGCGTCTTGGGTGGGCAGGACAGGCTCTGGAG...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCAGTCCAGGCCATGTCTaGAGAGGTAGCAGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSSPGHV*RGSSRA
Trigger: GGCCCGGCTGCTACCTCTGCAGACATGGCCTGGACT...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCAGCAGCTGAGCCACTCTaGGCCTTGGGCTTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPAAEPL*ALGFVS
Trigger: GGACACAAAGCCCAAGGCCCAGAGTGGCTCAGCTGC...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp GCTTTCCAAGGAAAGGACGTGGCTCAATCCTCACCTCCTACCCTGTaGCCGTCTCACCAACCTTGCTTAGTGAATCTCCTAACAACACTT +
Preference number: 2 (lower is better)
Translates to: AFQGKDVAQSSPPTL*PSHQPCLVNLLTTL
Trigger: AAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGAGGATTGAGCCACGTCCTTTCCTTGGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTTGGCCAGTCCACTGCTaGAGTAAGGGGCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSWPVHC*SKGQLS
Trigger: GCTCAGCTGCCCCTTACTTCAGCAGTGGACTGGCCA...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACTCCAGAGCCTGTCCTaGCCACCCAAGACGCTGTGG +
Preference number: 2 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAILQSLS*PPKTLW
Trigger: CCACAGCGTCTTGGGTGGGCAGGACAGGCTCTGGAG...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR GCA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACTGCCCCCTTACAGTGTaGCGTTTTATCTGGCAATTC +
Preference number: 2 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDCPLTV*RFIWQF
Trigger: GAATTGCCAGATAAAACGGCACACTGTAAGGGGGCA...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 2 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR CCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAGTCCCTGAGGAAAACTaGTCTCACTCTGGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRVPEEN*SHSGEK
Trigger: TTTCTCTCCAGAGTGAGACCAGTTTTCCTCAGGGAC...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp GTTGCCGTCTCACCAACCTTGCTTAGTGAATCTCCTAACAACACTTaGCCCCCTTACAGTGTGCCGTTTTATCTGGCAATTCTGTGGCTA +
Preference number: 2 (lower is better)
Translates to: VAVSPTLLSESPNNT*PPYSVPFYLAILWL
Trigger: TAGCCACAGAATTGCCAGATAAAACGGCACACTGTAAGGGGGCAAAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGATTTACTAGGTTGAGTTaGGGAGACAGCAAACAGCCT +
Preference number: 2 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRFTRLS*GDSKQP
Trigger: AGGCTGTTTGCTGTCTCCTCAACTCAACCTAGTAAA...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTATGGACTACCCAGTATaGACACGACGTGGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSMDYPV*TRRGAL
Trigger: GAGGGCACCACGTCGTGTGCATACTGGGTAGTCCAT...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp ATATGGTCACTGTGCCCTACTCTCTTAATTTTCACGCTTTCCAAGGAAAGGACGCCACAGCCTCCATCTTaGTCTCTCTGGCTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: IWSLCPTLLIFTLSKERTPQPPS*SLWLFP
Trigger: AGGGAAAAGCCAGAGAGACCAAGATGGAGGCTGTGG...CGTCCTTTCCTTGGAAAGCGTGAAAATTAAGAGAGTAGGGCACAGTGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCCTTCAAGTCTCATGGTaGCCCAGGTCTGGCCAAAGC +
Preference number: 2 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSLQVSW*PRSGQS
Trigger: GCTTTGGCCAGACCTGGGCCACCATGAGACTTGAAG...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTTTGCCACACTGGCTGTaGAAGATACCTGGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSLPHWL*KIPGCR
Trigger: CCTACACCCAGGTATCTTTCACAGCCAGTGTGGCAA...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCCAGGGCTCTCGGCAATaGATGGGCTCTTTGTTCTGT +
Preference number: 2 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSQGSRQ*MGSLFC
Trigger: ACAGAACAAAGAGCCCATTCATTGCCGAGAGCCCTG...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCACAACACTTGGTGGAATaGCTGCCGTTTCTCATCCTG +
Preference number: 2 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPQHLVE*LPFLIL
Trigger: CAGGATGAGAAACGGCAGTCATTCCACCAAGTGTTG...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACTCAATACTACGTTGTTaGAGAGACATGTTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDSILRC*RDMFLP
Trigger: AGGCAAGAACATGTCTCTCCAACAACGTAGTATTGA...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCAGCCACTCTGGGCCTTaGGCTTTGTGTCCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: KYRELRNKQIHTNTQESSSHSGP*ALCPGS
Trigger: GGACCCAGGACACAAAGCCCAAGGCCCAGAGTGGCT...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCAGCTATCATTTGGTCATaGAGGGTTGATGGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPAIIWS*RVDGVR
Trigger: CCTGACTCCATCAACCCTCCATGACCAAATGATAGC...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCCCAGTTTCCAACACTTaGTGGAATGACTGCCGTTTC +
Preference number: 2 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSPVSNT*WNDCRF
Trigger: GAAACGGCAGTCATTCCACCAAGTGTTGGAAACTGG...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp AACAACTTGCTCTGTTCAATACTACGTTGTTGGAGAGACATGTTCTaGCCTCATCAGAGAGCAATTTCTTTTGACACCCAACACAACGGG +
Preference number: 2 (lower is better)
Translates to: NNLLCSILRCWRDMF*PHQRAISFDTQHNG
Trigger: CCCGTTGTGTTGGGTGTCAAAAGAAATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCAACAACGTAGTATTGAACAGAGCAAGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR TCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTCAAGAATCTTCCCACTaGCGTGAAAAACATGCTAGC +
Preference number: 2 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSQESSH*REKHAS
Trigger: GCTAGCATGTTTTTCACGTCAGTGGGAAGATTCTTG...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR GCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAAAACAAAAACTCTTCTTaGTATGGAGGCAACGGGAAA +
Preference number: 2 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKNKNSS*YGGNGK
Trigger: TTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTAAACTCTTCTTGCTATaGAGGCAACGGGAAATGCTG +
Preference number: 2 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSKLFLL*RQREML
Trigger: CAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTT...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR CCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACAAGGACTTTGCCTAGATaGAAAGTTCGCAGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTRTLPR*KVRSGR
Trigger: TCTACCACTGCGAACTTTCCATCTAGGCAAAGTCCT...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp AATGGCAACTTGCAGAACCTTTCCCCTACTCCACAAATTAACAACTaGCTCTGTTCAATACTACGTTGTTGGAGAGACATGTTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: NGNLQNLSPTPQINN*LCSILRCWRDMFLP
Trigger: AGGCAAGAACATGTCTCTCCAACAACGTAGTATTGAACAGAGCAAGTTGTTAATTTGTGGAGTAGGGGAAAGGTTCTGCAAGTTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAAAACTCTTCTTGCTATaGAGGCAACGGGAAATGCTG +
Preference number: 2 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIKLFLL*RQREML
Trigger: CAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTT...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR CCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCAAACTGGTCTCACTCTaGAGAGAAAAGGAGAACTTG +
Preference number: 2 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSKLVSL*REKENL
Trigger: CAAGTTCTCCTTTTCTCTCCAGAGTGAGACCAGTTT...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp CTCTTTGTTCTGTGGAATCTGCTGCAAACATTTGTAAAACTGGATTaGTACAATGGCAACTTGCAGAACCTTTCCCCTACTCCACAAATT +
Preference number: 2 (lower is better)
Translates to: LFVLWNLLQTFVKLD*YNGNLQNLSPTPQI
Trigger: AATTTGTGGAGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACAAATCCAGTTTTACAAATGTTTGCAGCAGATTCCACAGAACAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTTGTAAGAAAATGCATTaGCTGCATTCACACAAAAGC +
Preference number: 2 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSCKKMH*LHSHKS
Trigger: GCTTTTGTGTGAATGCAGCCAATGCATTTTCTTACA...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp AATCTGCTGCAAACATTTGTAAAACTGGATTTGTACAATGGCAACTaGCAGAACCTTTCCCCTACTCCACAAATTAACAACTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: NLLQTFVKLDLYNGN*QNLSPTPQINNLLC
Trigger: ACAGAGCAAGTTGTTAATTTGTGGAGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACAAATCCAGTTTTACAAATGTTTGCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CCA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCTTAGGACTTGTTGGGTaGAAGGACACCTGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: KYRELRNKQIHTNTQESSLGLVG*KDTCLK
Trigger: TTTAAGGCAGGTGTCCTTCCACCCAACAAGTCCTAA...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 90 bp GTTGTTGGAGAGACATGTTCTTGCCTCATCAGAGAGCAATTTCTTTaGACACCCAACACAACGGGTAAAATGTTTAATTTGAAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: VVGETCSCLIREQFL*TPNTTGKMFNLKSN
Trigger: ATTGCTTTTCAAATTAAACATTTTACCCGTTGTGTTGGGTGTCAAAAGAAATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCAACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp GGAGTCAGGCTGGCGGGCAGCCCTTGGCCGGCCCTTTaGAGACAAGGGCTCAGGGACATCCCGTTTCCTCGA +
Preference number: 3 (lower is better)
Translates to: GVRLAGSPWPAL*RQGLRDIPFPR
Trigger: TCGAGGAAACGGGATGTCCCTGAGCCCTTGTCTCCAAAGGGCCGGCCAAGGGCTGCCCGCCAGCCTGACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 72 bp GCAGAGCCCGCCAGCTATCATTTGGTCATGGAGGGTTaGTGGAGTCAGGCTGGCGGGCAGCCCTTGGCCGGC +
Preference number: 3 (lower is better)
Translates to: AEPASYHLVMEG*WSQAGGQPLAG
Trigger: GCCGGCCAAGGGCTGCCCGCCAGCCTGACTCCATCAACCCTCCATGACCAAATGATAGCTGGCGGGCTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 72 bp ATGGGAACTGGGCTAGACAGAGGGACCAGGCTTCTATaGGCGGGGAGAGGCAGGGCCACCGTGGCTCGTGTC +
Preference number: 3 (lower is better)
Translates to: MGTGLDRGTRLL*AGRGRATVARV
Trigger: GACACGAGCCACGGTGGCCCTGCCTCTCCCCGCTCATAGAAGCCTGGTCCCTCTGTCTAGCCCAGTTCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp GGCCTGGGTAGCCTGCAGAGCCCGCCAGCTATCATTTaGTCATGGAGGGTTGATGGAGTCAGGCTGGCGGGC +
Preference number: 3 (lower is better)
Translates to: GLGSLQSPPAII*SWRVDGVRLAG
Trigger: GCCCGCCAGCCTGACTCCATCAACCCTCCATGACCAAATGATAGCTGGCGGGCTCTGCAGGCTACCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTGAGCCACTCTGGGCCTaGGGCTTTGTGTCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: RSTGQAPARNTQPLCSEIEPLWA*GFVSWV
Trigger: GACCCAGGACACAAAGCCCAAGGCCCAGAGTGGCTC...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp GTAAGGAAACTAGGTAGCTGGGGGCCCCGAGGGAGCTaGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGG +
Preference number: 3 (lower is better)
Translates to: VRKLGSWGPRGS*EASPVDQVIAR
Trigger: CCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCGGGGCCCCCAGCTACCTAGTTTCCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 72 bp AGAAGGTGCCGTGGGCCCTTCCAACCTACCCAGGCATaGAGCCAACTAAGTGGTCTGCTTGCCACACTGGCT +
Preference number: 3 (lower is better)
Translates to: RRCRGPFQPTQA*SQLSGLLATLA
Trigger: AGCCAGTGTGGCAAGCAGACCACTTAGTTGGCTGCATGCCTGGGTAGGTTGGAAGGGCCCACGGCACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp AAGGTGGTGTCTGTGGGAGTGGTGCTCCCTATGCCCTaGAGCACAGGAAGGAAATGGAGGCCTCTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: KVVSVGVVLPMP*STGRKWRPLQG
Trigger: CCCCTGAAGAGGCCTCCATTTCCTTCCTGTGCTCCAGGGCATAGGGAGCACCACTCCCACAGACACCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp GGTGGACCTAGGGCAGGTAACCTGGGGGTAGGCTCGTaGATGTGTGTGCCACTAGAGCCCTTAAAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: GGPRAGNLGVGS*MCVPLEPLKVV
Trigger: CACCACCTTTAAGGGCTCTAGTGGCACACACATCCACGAGCCTACCCCCAGGTTACCTGCCCTAGGTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp CTATCATTTGGTCATGGAGGGTTGATGGAGTCAGGCTaGCGGGCAGCCCTTGGCCGGCCCTTTGGAGACAAG +
Preference number: 3 (lower is better)
Translates to: LSFGHGGLMESG*RAALGRPFGDK
Trigger: CTTGTCTCCAAAGGGCCGGCCAAGGGCTGCCCGCCAGCCTGACTCCATCAACCCTCCATGACCAAATGATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 72 bp TCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTaGGATTCTGCAGGGCTCTCGGCAATGAATGGGCTC +
Preference number: 3 (lower is better)
Translates to: SGSGSEHTATLL*DSAGLSAMNGL
Trigger: GAGCCCATTCATTGCCGAGAGCCCTGCAGAATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTTCTCCTAACAACACTTaGCCCCCTTACAGTGTGCCG +
Preference number: 3 (lower is better)
Translates to: RSTGQAPARNTQPLCSEISPNNT*PPYSVP
Trigger: CGGCACACTGTAAGGGGGCAAAGTGTTGTTAGGAGA...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp GCGCTGGCCAAAGTCAAGAGGGTAAGGAACACGTCCTaGGATAAGGTGGGGCAGGTAGTGAGAGGTCAAGGA +
Preference number: 3 (lower is better)
Translates to: ALAKVKRVRNTS*DKVGQVVRGQG
Trigger: TCCTTGACCTCTCACTACCTGCCCCACCTTATCCCAGGACGTGTTCCTTACCCTCTTGACTTTGGCCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp AGAAGCCCCAGCTTGCTCCAGACTTGGCAGGCTCTCTaGAGTTCCCGCCTTGGAGGAAACAGTTCAGGTATG +
Preference number: 3 (lower is better)
Translates to: RSPSLLQTWQAL*SSRLGGNSSGM
Trigger: CATACCTGAACTGTTTCCTCCAAGGCGGGAACTCCAGAGAGCCTGCCAAGTCTGGAGCAAGCTGGGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp GCCCTTCCAACCTACCCAGGCATGCAGCCAACTAAGTaGTCTGCTTGCCACACTGGCTGTGAAAGATACCTG +
Preference number: 3 (lower is better)
Translates to: ALPTYPGMQPTK*SACHTGCERYL
Trigger: CAGGTATCTTTCACAGCCAGTGTGGCAAGCAGACCACTTAGTTGGCTGCATGCCTGGGTAGGTTGGAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp ACAGCCCAGACATCACAATGCAGCCACCAGCCCCTATaGCAGACCTGGGATGGCAACACAGACAAAAACACC +
Preference number: 3 (lower is better)
Translates to: TAQTSQCSHQPL*QTWDGNTDKNT
Trigger: GGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGGGGCTGGTGGCTGCATTGTGATGTCTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 72 bp GGGTGGCAGGTGAGAGGCAGGTTGATGTGGAGTGGGTaGCATTCAGTGATGCCACAGAAACCCTTAGGATTC +
Preference number: 3 (lower is better)
Translates to: GWQVRGRLMWSG*HSVMPQKPLGF
Trigger: GAATCCTAAGGGTTTCTGTGGCATCACTGAATGTCACCCACTCCACATCAACCTGCCTCTCACCTGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 72 bp CGGCTCGGAACACACAGCCACTTTGCTCTGAGATTCTaGAGGGCTCTCGGCAATGAATGGGCTCTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: RLGTHSHFALRF*RALGNEWALCS
Trigger: AGAACAAAGAGCCCATTCATTGCCGAGAGCCCTGCAGAATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTTGGAGAGACATGTTCTaGCCTCATCAGAGAGCAATT +
Preference number: 3 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSWRDMF*PHQRAI
Trigger: AATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCA...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACGTGATTGCCAGGACTTaGCCTAGATGGAAAGTTCGC +
Preference number: 3 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDVIART*PRWKVR
Trigger: GCGAACTTTCCATCTAGGCAAAGTCCTGGCAATCAC...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 72 bp TCCTCACCTCCTACCCTGTTGCCGTCTCACCAACCTTaGTTAGTGAATCTCCTAACAACACTTTGCCCCCTT +
Preference number: 3 (lower is better)
Translates to: SSPPTLLPSHQP*LVNLLTTLCPL
Trigger: AAGGGGGCAAAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp GCAGGACAAGCACCTGAAAGAGTTCAAAGACAGACCTaGTGTAGCGCTGGCCAAAGTCAAGAGGGTAAGGAA +
Preference number: 3 (lower is better)
Translates to: AGQAPERVQRQT*CSAGQSQEGKE
Trigger: TTCCTTACCCTCTTGACTTTGGCCAGCGCTACACCAGGTCTGTCTTTGAACTCTTTCAGGTGCTTGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAGCCGTCTCACCAACCTaGCTTAGTGAATCTCCTAAC +
Preference number: 3 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRAVSPT*LSESPN
Trigger: GTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGC...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCTCACCTCCTACCCTGTaGCCGTCTCACCAACCTTGC +
Preference number: 3 (lower is better)
Translates to: KETITIRHGLPSMHTTWCSPPTL*PSHQPC
Trigger: GCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGA...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGTTCAATACTACGTTGTaGGAGAGACATGTTCTTGCC +
Preference number: 3 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSFNTTL*ERHVLA
Trigger: GGCAAGAACATGTCTCTCCAACAACGTAGTATTGAA...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACTTGTACAATGGCAACTaGCAGAACCTTTCCCCTACT +
Preference number: 3 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDLYNGN*QNLSPT
Trigger: AGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACAA...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CCA 72 bp AGAACAGAAATTCTTCTGCCCTTAGGACTTGTTGGGTaGAAGGACACCTGCCTTAAATATGGTCACTGTGCC +
Preference number: 3 (lower is better)
Translates to: RTEILLPLGLVG*KDTCLKYGHCA
Trigger: GGCACAGTGACCATATTTAAGGCAGGTGTCCTTCCACCCAACAAGTCCTAAGGGCAGAAGAATTTCTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 72 bp CACCAACCTTGCTTAGTGAATCTCCTAACAACACTTTaGCCCCTTACAGTGTGCCGTTTTATCTGGCAATTC +
Preference number: 3 (lower is better)
Translates to: HQPCLVNLLTTL*PLTVCRFIWQF
Trigger: GAATTGCCAGATAAAACGGCACACTGTAAGGGGGCAAAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 72 bp AGGACTCCAAAAGTCTACAAAGGCAGCCAGAGAGCATaGATAAGTTCCAAGATGCCAAACTTTTGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: RTPKVYKGSQRA*ISSKMPNFCLG
Trigger: CCCAAGACAAAAGTTTGGCATCTTGGAACTTATTCATGCTCTCTGGCTGCCTTTGTAGACTTTTGGAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR TCA 72 bp TCCAACACTTGGTGGAATGACTGCCGTTTCTCATCCTaGCACACAGATAAAACATCATTTCACAGATACTGG +
Preference number: 3 (lower is better)
Translates to: SNTWWNDCRFSS*HTDKTSFHRYW
Trigger: CCAGTATCTGTGAAATGATGTTTTATCTGTGTGTCAGGATGAGAAACGGCAGTCATTCCACCAAGTGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 72 bp TCTGTTCAATACTACGTTGTTGGAGAGACATGTTCTTaGCTCATCAGAGAGCAATTTCTTTTGACACCCAAC +
Preference number: 3 (lower is better)
Translates to: SVQYYVVGETCS*LIREQFLLTPN
Trigger: GTTGGGTGTCAAAAGAAATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCAACAACGTAGTATTGAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR GCA 72 bp TGCAGAACCTTTCCCCTACTCCACAAATTAACAACTTaGTCTGTTCAATACTACGTTGTTGGAGAGACATGT +
Preference number: 3 (lower is better)
Translates to: CRTFPLLHKLTT*SVQYYVVGETC
Trigger: ACATGTCTCTCCAACAACGTAGTATTGAACAGAGCAAGTTGTTAATTTGTGGAGTAGGGGAAAGGTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR-3UTR CAA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAAAACAAAAACTCTTCTaGCTATGGAGGCAACGGGAA +
Preference number: 3 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIKQKLF*LWRQRE
Trigger: TTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR-3UTR CAA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTTTTGTAAAACTGGATTaGTACAATGGCAACTTGCAG +
Preference number: 3 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSFVKLD*YNGNLQ
Trigger: CTGCAAGTTGCCATTGTACAAATCCAGTTTTACAAA...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACCCGCGCCGGGTTTGTTaGTCCGCCATGACCGGCGCC +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNPRRVC*SAMTGA
Trigger: GGCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGG...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAGGGCCTGGGTAGCCTaGAGAGCCCGCCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNRAWVA*RARQLS
Trigger: TGATAGCTGGCGGGCTCTGCAGGCTACCCAGGCCCT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp TGGAGTCAGGCTGGCGGGCAGCCCTTGGCCGGCCCTTaGGAGACAAGGGCTCAGGGACATCCCGTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: WSQAGGQPLAGP*ETRAQGHPVSS
Trigger: CGAGGAAACGGGATGTCCCTGAGCCCTTGTCTCCAAAGGGCCGGCCAAGGGCTGCCCGCCAGCCTGACTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACGCCCAGACATCACAATaGAGCCACCAGCCCCTATGG +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNAQTSQ*SHQPLW
Trigger: CCATAGGGGCTGGTGGCTGCATTGTGATGTCTGGGC...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACACCTGGAAGACAGTGTaGAGCCTGGTGAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNTWKTV*SLVRAG
Trigger: ACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAGGCTGCGAGCTTGTTaGGGCAGAAGTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNRLRAC*GRSGEW
Trigger: CCACTCACCACTTCTGCCCCAACAAGCTCGCAGCCT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR CAA 72 bp TGCAGAGCCCGCCAGCTATCATTTGGTCATGGAGGGTaGATGGAGTCAGGCTGGCGGGCAGCCCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CRARQLSFGHGG*MESGWRAALGR
Trigger: CCGGCCAAGGGCTGCCCGCCAGCCTGACTCCATCAACCCTCCATGACCAAATGATAGCTGGCGGGCTCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACGCGAGTACTTGGCAGTaGCATCAGCCAGTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNASTWQ*HQPVPQ
Trigger: TTGGGGAACTGGCTGATGTCACTGCCAAGTACTCGC...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACTCTGGACTGGCCCAATaGTCTTATTCCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNSGLAQ*SYSGLQ
Trigger: CTGGAGGCCGGAATAAGAGCATTGGGCCAGTCCAGA...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACTGCCCACACTGGTCTTaGAGGAATGCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNCPHWS*RNAAPP
Trigger: AGGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCA...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGCCGCGCCGGGTTTGTTaGTCCGCCATGACCGGCGCC +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWPRRVC*SAMTGA
Trigger: GGCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGG...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGTCCCGCTCCATGCGGTaGTGCCTAGGGTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWSRSMR*CLGSAP
Trigger: CGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGA...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACATCAGACTGTATGACTaGGGATCCAGGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNIRLYD*GSRLRA
Trigger: AGCTCGCAGCCTGGATCCCCAGTCATACAGTCTGAT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACCCACAGCCTCCATCTTaGTCTCTCTGGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNPQPPS*SLWLFP
Trigger: AGGGAAAAGCCAGAGAGACCAAGATGGAGGCTGTGG...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACTCTGCTTCCGAGACATaGCACAGTTCTTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNSASET*HSSCHD
Trigger: GTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGA...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACTTGGGGCAGAAGTGGTaGGTGGCCAGAATAGCTAAA +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNLGQKW*VARIAK
Trigger: TTTAGCTATTCTGGCCACTCACCACTTCTGCCCCAA...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACGTCCTGTGGATCAAGTaGTTGCCAGGACTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNVLWIK*LPGLCL
Trigger: TAGGCAAAGTCCTGGCAATCACTTGATCCACAGGAC...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGCGCTCCATGCGGTGGTaGCTAGGGTCCGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWRSMRW*LGSAPG
Trigger: ACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCG...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACGCCTGGGTCAAGCTCTaGCAATTCATCCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNAWVKL*QFILTE
Trigger: TTCTGTCAGGATGAATTGGCAGAGCTTGACCCAGGC...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACATTCCTTGCCCACACTaGTCTTGCAGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNIPCPH*SCRNAA
Trigger: TGCTGCATTCCTGCAAGACCAGTGTGGGCAAGGAAT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACCACTATCACCATGGTTaGTCCAGTGATTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNHYHHG*SSDWPL
Trigger: AAGAGGCCAATCACTGGAGCAACCATGGTGATAGTG...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTCTCCAGAGCCTGTCCTaGCCACCCAAGACGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSLQSLS*PPKTLW
Trigger: CCACAGCGTCTTGGGTGGGCAGGACAGGCTCTGGAG...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACACTCCTGCCCAGACATaGTCCTTTCGATTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNTPAQT*SFRFLL
Trigger: AAGAAGAAATCGAAAGGATCATGTCTGGGCAGGAGT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCGCTCCATGCGGTGGTaGCTAGGGTCCGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASRSMRW*LGSAPG
Trigger: ACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAACAGAAATAGTGCCTaGGTCAAGCTCTGCCAATTC +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNNRNSA*VKLCQF
Trigger: GAATTGGCAGAGCTTGACCCAGGCACTATTTCTGTT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000487099.7
CDS-3UTR CCA 90 bp CGAGGGAGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTCGGTTCATCCCCATCTaGAGGCATTTGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RGSWEASPVDQVIARTLPRFIPI*RHLSRR
Trigger: CCGCCTGCTCAAATGCCTCCAGATGGGGATGAACCG...AGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAAACTCTTCTTGCTATaGAGGCAACGGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNKLFLL*RQREML
Trigger: CAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGCCTTGGCCGGCCCTTTaGAGACAAGGGCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWPWPAL*RQGLRD
Trigger: GTCCCTGAGCCCTTGTCTCCAAAGGGCCGGCCAAGG...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CGAGGGAGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTTCTGCCAATTCATCCTaGCAGAAACCGTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: RGSWEASPVDQVIARTLPSANSS*QKPLRG
Trigger: GCCGCGCAACGGTTTCTGTCAGGATGAATTGGCAGA...AGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CGAGGGAGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTGTGAATCAGACTGTATaGCTGGGGATCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RGSWEASPVDQVIARTLPVNQTV*LGIQAA
Trigger: CGCAGCCTGGATCCCCAGTCATACAGTCTGATTCAC...AGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACGGAAAGCGGTTCGGCTaGTGTGTGTATTTATATTCA +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNGKRFG*CVYLYS
Trigger: TGAATATAAATACACACATCAGCCGAACCGCTTTCC...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp CGAGGGAGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTCGCAGTGGTAGACAATaGTGGTGGTGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: RGSWEASPVDQVIARTLPRSGRQ*WWCRGK
Trigger: CTTACCCCTGCACCACCATCATTGTCTACCACTGCG...AGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCCTGACAGAAACCGTTaGGCGGCGGCGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASPDRNR*AAAEGA
Trigger: CGCTCCCTCCGCCGCCGCGCAACGGTTTCTGTCAGG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAGTTCTTGTCACGACTaGATCGATATACCCGTTTGT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNSSCHD*IDIPVC
Trigger: ACAAACGGGTATATCGATGCAGTCGTGACAAGAACT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTCACCTCCTACCCTGTTaGCGTCTCACCAACCTTGCT +
Preference number: 4 (lower is better)
Translates to: RSTGQAPARNTQPLCSEIHLLPC*RLTNLA
Trigger: AGCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTG...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTCCCGCTCCATGCGGTaGTGCCTAGGGTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLSRSMR*CLGSAP
Trigger: CGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGA...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGGAGCCTGGTGAGGGCTaGTTGCTCTCCGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWEPGEG*LLSEAL
Trigger: CAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTC...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCACGCTGTGGTTGGCCTaGGGAGGGCGCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASTLWLA*GGRLEQ
Trigger: CTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAAGAGGAGGGGCAGCTaGTCCAGGGGCACATTCACC +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWKRRGS*SRGTFT
Trigger: GGTGAATGTGCCCCTGGAGCAGCTGCCCCTCCTCTT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTATGGACTACCCAGTATaGACACGACGTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSMDYPV*TRRGAL
Trigger: GAGGGCACCACGTCGTGTGCATACTGGGTAGTCCAT...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCTCCCGCTCCATGCGGTaGTGCCTAGGGTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSSRSMR*CLGSAP
Trigger: CGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGA...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCAACTTGGCAGGCTCTCTaGAGTTCCCGCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PMADLGWQHRQKHQHPRATWQAL*SSRLGG
Trigger: TCCTCCAAGGCGGGAACTCCAGAGAGCCTGCCAAGT...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTAGCTTGCTCCAGACTTaGCAGGCTCTCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSSLLQT*QALWSS
Trigger: GGAACTCCAGAGAGCCTGCCAAGTCTGGAGCAAGCT...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTAGCCTTCAAGTCTCATaGTGGCCCAGGTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSSLQVS*WPRSGQ
Trigger: TTGGCCAGACCTGGGCCACCATGAGACTTGAAGGCT...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGACAGCCACTTTGCTCTaGGATTCTGCAGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWTATLL*DSAGLS
Trigger: CGAGAGCCCTGCAGAATCTCAGAGCAAAGTGGCTGT...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCGCGCCGGGTTTGTTaGTCCGCCATGACCGGCGCC +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQPRRVC*SAMTGA
Trigger: GGCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCATGCCCACACTGGTCTTaGAGGAATGCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: PMADLGWQHRQKHQHPRACPHWS*RNAAPP
Trigger: AGGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCA...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCTCCAGAGCCTGTCCTaGCCACCCAAGACGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSLQSLS*PPKTLW
Trigger: CCACAGCGTCTTGGGTGGGCAGGACAGGCTCTGGAG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGACCCTTCCCTTCCAGGTaGTTCTGGCTCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRPFPSR*FWLQPS
Trigger: GGAGGGCTGGAGCCAGAAGCACCTGGAAGGGAAGGG...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAAGTCCAGGCCATGTCTaGAGAGGTAGCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRSPGHV*RGSSRA
Trigger: GGCCCGGCTGCTACCTCTGCAGACATGGCCTGGACT...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp CGAGGGAGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTTGGACATGGCTTAGATaGTGCCCACAGTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RGSWEASPVDQVIARTLPWTWLR*CPQWVC
Trigger: ACAAACCCACTGTGGGCAGCATCTAAGCCATGTCCA...AGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGTCCCGCTCCATGCGGTaGTGCCTAGGGTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQSRSMR*CLGSAP
Trigger: CGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGA...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACTATATATTGGTAATGTaGAGGCACAGACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNYILVM*RHRHSH
Trigger: ATGGGAATGTCTGTGCCTCCACATTACCAATATATA...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAGGCTGCGAGCTTGTTaGGGCAGAAGTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWRLRAC*GRSGEW
Trigger: CCACTCACCACTTCTGCCCCAACAAGCTCGCAGCCT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCAAGACGCTGTGGTTaGCCTGAGGAGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLPRRCG*PEEGAW
Trigger: CCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGG...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGTCTGCCAATTCATCCTaGCAGAAACCGTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWSANSS*QKPLRG
Trigger: GCCGCGCAACGGTTTCTGTCAGGATGAATTGGCAGA...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGCCATGGTTGCTCCAGTaGTTGGCCTCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWPWLLQ*LASSSN
Trigger: GTTTGAGGAAGAGGCCAATCACTGGAGCAACCATGG...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTCAGGTAAGCACATCATaGGATCAGGAAAGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSQVSTS*DQESGS
Trigger: CGAACCGCTTTCCTGATCTCATGATGTGCTTACCTG...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTGAAGTAAGGGGCAGCTaGGCCACTCTGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPEVRGS*ATLGLG
Trigger: CCCAAGGCCCAGAGTGGCTCAGCTGCCCCTTACTTC...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCTGGCCAGTCCACTGCTaGAGTAAGGGGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASWPVHC*SKGQLS
Trigger: GCTCAGCTGCCCCTTACTTCAGCAGTGGACTGGCCA...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAAGAGGAGGGGCAGCTaGTCCAGGGGCACATTCACC +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASKRRGS*SRGTFT
Trigger: GGTGAATGTGCCCCTGGAGCAGCTGCCCCTCCTCTT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGCAACCTACCCAGGCATaGAGCCAACTAAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWQPTQA*SQLSGL
Trigger: CAGACCACTTAGTTGGCTGCATGCCTGGGTAGGTTG...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGGGACAGGGAGGATCCTaGTTACTTCCTCCTATCCCT +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSGQGGS*LLPPIP
Trigger: AGGGATAGGAGGAAGTAAGCAGGATCCTCCCTGTCC...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGAGCCTGGTGAGGGCTaGTTGCTCTCCGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLEPGEG*LLSEAL
Trigger: CAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTATTCCTTGCCCACACTaGTCTTGCAGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSIPCPH*SCRNAA
Trigger: TGCTGCATTCCTGCAAGACCAGTGTGGGCAAGGAAT...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTAGCCACTCTGGGCCTTaGGCTTTGTGTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSSHSGP*ALCPGS
Trigger: GGACCCAGGACACAAAGCCCAAGGCCCAGAGTGGCT...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCAATGCAGCCAACTAAGTaGTCTGCTTGCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: PMADLGWQHRQKHQHPRAMQPTK*SACHTG
Trigger: GCCAGTGTGGCAAGCAGACCACTTAGTTGGCTGCAT...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGAGTGCTTTTGGTGGTTaGGGATCAGAGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWSAFGG*GSERGQ
Trigger: CTGCCCTCTCTCTGATCCCCAACCACCAAAAGCACT...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTGCAAGGGAACTCTCATaGGCTGGGGTAGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPARELS*AGVGGG
Trigger: GCCTCCCCCTACCCCAGCCCATGAGAGTTCCCTTGC...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTCCGCCAGCTATCATTTaGTCATGGAGGGTTGATGGA +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSPPAII*SWRVDG
Trigger: TCCATCAACCCTCCATGACCAAATGATAGCTGGCGG...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGTCTGCTTCCGAGACATaGCACAGTTCTTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSSASET*HSSCHD
Trigger: GTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGA...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCAGTGTGGAGCCTGGTaGGGGCTGGTTGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSQCGAW*GLVALR
Trigger: TCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTG...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGACGCTGTGGTTGGCCTaGGGAGGGCGCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQTLWLA*GGRLEQ
Trigger: CTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGT...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCACGCTGTGGTTGGCCTaGGGAGGGCGCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCTLWLA*GGRLEQ
Trigger: CTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGT...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACAGGGACCAGGCTTCTATaGGCGGGGAGAGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTGTRLL*AGRGRA
Trigger: GGCCCTGCCTCTCCCCGCTCATAGAAGCCTGGTCCC...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTCCTGACAGAAACCGTTaGGCGGCGGCGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSPDRNR*AAAEGA
Trigger: CGCTCCCTCCGCCGCCGCGCAACGGTTTCTGTCAGG...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTAAGAGGAGGGGCAGCTaGTCCAGGGGCACATTCACC +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPKRRGS*SRGTFT
Trigger: GGTGAATGTGCCCCTGGAGCAGCTGCCCCTCCTCTT...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp ATATGGTCACTGTGCCCTACTCTCTTAATTTTCACGCTTTCCAAGGAAAGGACGACAGGGCCCATCCCTTaGCAGCTGGCAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: IWSLCPTLLIFTLSKERTTGPIP*QLAGWE
Trigger: CTCCCACCCTGCCAGCTGGCAAGGGATGGGCCCTGT...CGTCCTTTCCTTGGAAAGCGTGAAAATTAAGAGAGTAGGGCACAGTGACCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCGGTTCATCCCCATCTaGAGGCATTTGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASRFIPI*RHLSRR
Trigger: CCGCCTGCTCAAATGCCTCCAGATGGGGATGAACCG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGTTCCCAGGGGAACTGTaGTCACTATCACCATGGTTG +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSFPGEL*SLSPWL
Trigger: CAACCATGGTGATAGTGACCACAGTTCCCCTGGGAA...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGAGCCTGGTGAGGGCTaGTTGCTCTCCGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSEPGEG*LLSEAL
Trigger: CAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTC...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCAGGAAACTAGGTAGCTaGGGGCCCCGAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSRKLGS*GPRGSW
Trigger: CCAGCTCCCTCGGGGCCCCCAGCTACCTAGTTTCCT...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGCCAGGCTTCAGAACATaGCATTCTGCTCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSPGFRT*HSAQLV
Trigger: AACCAGCTGAGCAGAATGCCATGTTCTGAAGCCTGG...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCAGCCCTCCAGGCCTTaGCTGGCCAGTCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQQPSRP*LASPLL
Trigger: CAGCAGTGGACTGGCCAGCCAAGGCCTGGAGGGCTG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGGTTCAAAGACAGACCTaGTGTAGCGCTGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSVQRQT*CSAGQS
Trigger: ACTTTGGCCAGCGCTACACCAGGTCTGTCTTTGAAC...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCAGAAGAAGGTGCCGTaGGCCCTTCCAACCTACCCA +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASQKKVP*ALPTYP
Trigger: TGGGTAGGTTGGAAGGGCCCACGGCACCTTCTTCTG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp GGAAAGGACGTGGCTCAATCCTCACCTCCTACCCTGTaGCCGTCTCACCAACCTTGCTTAGTGAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: GKDVAQSSPPTL*PSHQPCLVNLL
Trigger: TAGGAGATTCACTAAGCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGAGGATTGAGCCACGTCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp TCTGACCTTACTCACCGCCTCCCTTTGAGCCTACAGTaGATTCCTGTGCAGGCTGTGGTCCATTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDLTHRLPLSLQ*IPVQAVVHLGL
Trigger: AAGCCCTAAATGGACCACAGCCTGCACAGGAATCAACTGTAGGCTCAAAGGGAGGCGGTGAGTAAGGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCGCGGTCCCCACAAATaGGACAGGTTCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSRGPHK*DRFVVQ
Trigger: CTGAACAACGAACCTGTCTCATTTGTGGGGACCGCG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGTGCAAATGCTCCGCTTaGAAAACCCTTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWCKCSA*KTLCSP
Trigger: AGGGCTGCAAAGGGTTTTTCAAGCGGAGCATTTGCA...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCAGTGTGGAGCCTGGTaGGGGCTGGTTGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQQCGAW*GLVALR
Trigger: TCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGTTGGGGCAGAAGTGGTaGGTGGCCAGAATAGCTAAA +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWLGQKW*VARIAK
Trigger: TTTAGCTATTCTGGCCACTCACCACTTCTGCCCCAA...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGGGCACGTGTAATCCTTaGTTGAGAGCTCGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWGTCNP*LRARRR
Trigger: TCTTCTGCGAGCTCTCAATCAAGGATTACACGTGCC...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCGCGAGTACTTGGCAGTaGCATCAGCCAGTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASASTWQ*HQPVPQ
Trigger: TTGGGGAACTGGCTGATGTCACTGCCAAGTACTCGC...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGCAGGTAAGCACATCATaGGATCAGGAAAGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWQVSTS*DQESGS
Trigger: CGAACCGCTTTCCTGATCTCATGATGTGCTTACCTG...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCTGTGTCCTGGGTCCCTaGGGAAAACTGGTCTCACTC +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASCVLGP*GKLVSL
Trigger: GAGTGAGACCAGTTTTCCTCAGGGACCCAGGACACA...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTTTTACTAGGTTGAGTTaGGGAGACAGCAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSFTRLS*GDSKQP
Trigger: AGGCTGTTTGCTGTCTCCTCAACTCAACCTAGTAAA...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCAAATACATCTAGTGGCTaGCCTAATGTCTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: PMADLGWQHRQKHQHPRANTSSG*PNVSTL
Trigger: CAGCGTGGAGACATTAGGTCAGCCACTAGATGTATT...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCATGCCCACCTCTCTTGTaGGTGGGGCATAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPCPPLL*VGHRGW
Trigger: CCAGCCCCTATGCCCCACTCACAAGAGAGGTGGGCA...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAGGTACTCACCTCCCTaGAAAAGGGTGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASRYSPP*KRVAGE
Trigger: CTCACCTGCCACCCTTTTTCAGGGAGGTGAGTACCT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAGGAGAAAGGGAGGATaGTCAGTTGCAAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWRRKGG*SVAKAE
Trigger: CTCTGCCTTTGCAACTGATCATCCTCCCTTTCTCCT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACTGGCACCTGTTCCTCTaGTTCCGAGACATGACACAG +
Preference number: 4 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDWHLFL*FRDMTQ
Trigger: CTGTGTCATGTCTCGGAAGCAGAGGAACAGGTGCCA...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCATCTTCCTCAAACTCCTaGCCAGACATGATCCTTTCG +
Preference number: 4 (lower is better)
Translates to: PMADLGWQHRQKHQHPRASSSNS*PDMILS
Trigger: CGAAAGGATCATGTCTGGGCAGGAGTTTGAGGAAGA...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGCTGGTCTTGCAGGAATaGAGCACCACCTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWLVLQE*STTLKR
Trigger: CCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACCAG...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGCTCACTCAAAGTGAGTaGTTTTGGTGGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSLTQSE*FWWLGI
Trigger: GATCCCCAACCACCAAAAGCACTCACTTTGAGTGAG...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGGTTCATCCCCATCTaGAGGCATTTGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPRFIPI*RHLSRR
Trigger: CCGCCTGCTCAAATGCCTCCAGATGGGGATGAACCG...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGTTCCCAGGGGAACTGTaGTCACTATCACCATGGTTG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWFPGEL*SLSPWL
Trigger: CAACCATGGTGATAGTGACCACAGTTCCCCTGGGAA...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAGTGAGTGCTTTTGGTaGTTGGGGATCAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWSECFW*LGIRER
Trigger: CCTCTCTCTGATCCCCAACCACCAAAAGCACTCACT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGCCAGTTTCCAACACTTaGTGGAATGACTGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSPVSNT*WNDCRF
Trigger: GAAACGGCAGTCATTCCACCAAGTGTTGGAAACTGG...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGACACATCCCTGAGCTGTaGCCCCAGAAACCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRHIPEL*PQKPLS
Trigger: AGACAAGGGTTTCTGGGGCCACAGCTCAGGGATGTG...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGACTTCAAGTCTCATGGTaGCCCAGGTCTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRLQVSW*PRSGQS
Trigger: GCTTTGGCCAGACCTGGGCCACCATGAGACTTGAAG...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTGGTGTCTGTGGGAGTaGTGCTCCCTATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPWCLWE*CSLCPG
Trigger: TCCAGGGCATAGGGAGCACCACTCCCACAGACACCA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTCTGGCGGGCAGCCCTTaGCCGGCCCTTTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSLAGSP*PALWRQ
Trigger: TTGTCTCCAAAGGGCCGGCCAAGGGCTGCCCGCCAG...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTCTGCCAATTCATCCTaGCAGAAACCGTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPSANSS*QKPLRG
Trigger: GCCGCGCAACGGTTTCTGTCAGGATGAATTGGCAGA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTCTGCCAATTCATCCTaGCAGAAACCGTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLSANSS*QKPLRG
Trigger: GCCGCGCAACGGTTTCTGTCAGGATGAATTGGCAGA...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACACAGTGTGGAGCCTGGTaGGGGCTGGTTGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTQCGAW*GLVALR
Trigger: TCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTG...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGTGAATCAGACTGTATaGCTGGGGATCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLVNQTV*LGIQAA
Trigger: CGCAGCCTGGATCCCCAGTCATACAGTCTGATTCAC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTGTGAATCAGACTGTATaGCTGGGGATCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPVNQTV*LGIQAA
Trigger: CGCAGCCTGGATCCCCAGTCATACAGTCTGATTCAC...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGTGATAGAGGTAGATaGGCCGCTCGATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSCDRGR*AARSPP
Trigger: TGGAGGTGATCGAGCGGCTCATCTACCTCTATCACA...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCTGTGATAGAGGTAGATaGGCCGCTCGATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASCDRGR*AARSPP
Trigger: TGGAGGTGATCGAGCGGCTCATCTACCTCTATCACA...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAATCCTCACTCAAAGTaGGTGCTTTTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWNPHSK*VLLVVG
Trigger: CCCAACCACCAAAAGCACTCACTTTGAGTGAGGATT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTGCTTGGAGCAGGCTCTaGCCTTACTCACCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSAWSRL*PYSPPP
Trigger: GGGAGGCGGTGAGTAAGGTCAGAGCCTGCTCCAAGC...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCCTGACAGAAACCGTTaGGCGGCGGCGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCPDRNR*AAAEGA
Trigger: CGCTCCCTCCGCCGCCGCGCAACGGTTTCTGTCAGG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTCTGGACTGGCCCAATaGTCTTATTCCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLSGLAQ*SYSGLQ
Trigger: CTGGAGGCCGGAATAAGAGCATTGGGCCAGTCCAGA...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCACTGGGGATCCAGGCTaGGAGCTTGTTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSTGDPG*ELVGAE
Trigger: TTCTGCCCCAACAAGCTCGCAGCCTGGATCCCCAGT...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTGGCAACGGGAAATGCTaGTCCACAGCCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPGNGKC*STASIL
Trigger: CAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCC...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGGAGGCAACGGGAAATaGTGCTCCACAGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSGGNGK*CSTASI
Trigger: GATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCC...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCTGTCTGTGGGAGTGGTaGTCCCTATGCCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSCLWEW*SLCPGA
Trigger: TGCTCCAGGGCATAGGGAGCACCACTCCCACAGACA...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACGGTTGCTCCAGTGATTaGCCTCTTCCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDGCSSD*PLPQTP
Trigger: AGGAGTTTGAGGAAGAGGCCAATCACTGGAGCAACC...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACAGAGCCTGGTGAGGGCTaGTTGCTCTCCGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTEPGEG*LLSEAL
Trigger: CAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTC...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCTCAGTTCCACAGACCTaGAAGACAGTGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASSVPQT*KTVWSL
Trigger: CAGGCTCCACACTGTCTTCCAGGTCTGTGGAACTGA...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCAGACTGTATGACTaGGGATCCAGGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASIRLYD*GSRLRA
Trigger: AGCTCGCAGCCTGGATCCCCAGTCATACAGTCTGAT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGAAACTCTTCTTGCTATaGAGGCAACGGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSKLFLL*RQREML
Trigger: CAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTT...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGTTAGGACTTGTTGGGTaGAAGGACACCTGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWLGLVG*KDTCLK
Trigger: TTTAAGGCAGGTGTCCTTCCACCCAACAAGTCCTAA...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp ATCCTCACCTCCTACCCTGTTGCCGTCTCACCAACCTaGCTTAGTGAATCTCCTAACAACACTTTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ILTSYPVAVSPT*LSESPNNTLPP
Trigger: AGGGGGCAAAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCAGCCCTCACAGGAGATaGTCCCATAGTGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSSPHRR*SHSASL
Trigger: CAGGCTTGCACTATGGGATCATCTCCTGTGAGGGCT...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAAAGCCCTCACAGGAGATaGTCCCATAGTGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKSPHRR*SHSASL
Trigger: CAGGCTTGCACTATGGGATCATCTCCTGTGAGGGCT...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGATGCAAATGCTCCGCTTaGAAAACCCTTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRCKCSA*KTLCSP
Trigger: AGGGCTGCAAAGGGTTTTTCAAGCGGAGCATTTGCA...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTCTGCTTCCGAGACATaGCACAGTTCTTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSSASET*HSSCHD
Trigger: GTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGA...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCATGGTTGCTCCAGTaGTTGGCCTCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLPWLLQ*LASSSN
Trigger: GTTTGAGGAAGAGGCCAATCACTGGAGCAACCATGG...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGTGAATCAGACTGTATaGCTGGGGATCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSVNQTV*LGIQAA
Trigger: CGCAGCCTGGATCCCCAGTCATACAGTCTGATTCAC...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCGGCACGTGTAATCCTTaGTTGAGAGCTCGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASGTCNP*LRARRR
Trigger: TCTTCTGCGAGCTCTCAATCAAGGATTACACGTGCC...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAAGCGAGTACTTGGCAGTaGCATCAGCCAGTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKASTWQ*HQPVPQ
Trigger: TTGGGGAACTGGCTGATGTCACTGCCAAGTACTCGC...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCAGGTAAGCACATCATaGGATCAGGAAAGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSQVSTS*DQESGS
Trigger: CGAACCGCTTTCCTGATCTCATGATGTGCTTACCTG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAGGGCTGGGTGTCCTCTaGGCCAGGTTGAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIGLGVL*ARLSAL
Trigger: CAAAGCGCTCAACCTGGCTCAGAGGACACCCAGCCC...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCGCCTGGGTCAAGCTCTaGCAATTCATCCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASAWVKL*QFILTE
Trigger: TTCTGTCAGGATGAATTGGCAGAGCTTGACCCAGGC...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGACTGGGGATCCAGGCTaGGAGCTTGTTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQTGDPG*ELVGAE
Trigger: TTCTGCCCCAACAAGCTCGCAGCCTGGATCCCCAGT...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp ATATGGTCACTGTGCCCTACTCTCTTAATTTTCACGCTTTCCAAGGAAAGGACGACTGGGGATCCAGGCTaGGAGCTTGTTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: IWSLCPTLLIFTLSKERTTGDPG*ELVGAE
Trigger: TTCTGCCCCAACAAGCTCGCAGCCTGGATCCCCAGT...CGTCCTTTCCTTGGAAAGCGTGAAAATTAAGAGAGTAGGGCACAGTGACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCAATCAACATGGGCGTaGCCAATGGTTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPQSTWA*PMVPGP
Trigger: AGGACCTGGAACCATTGGGCACGCCCATGTTGATTG...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTTGATCCAGGCAATCTaGCTAAAGAGCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSLIQAI*LKSSSS
Trigger: CGACGAGCTGCTCTTTAGGCAGATTGCCTGGATCAA...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTAGCAGGATTAGCTCCTaGCACGTAGAGCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPSRISS*HVELKR
Trigger: CCTCTTGAGCTCTACGTGGCAGGAGCTAATCCTGCT...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCTGCCCACACTGGTCTTaGAGGAATGCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSCPHWS*RNAAPP
Trigger: AGGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCA...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCGGAGGCAACGGGAAATaGTGCTCCACAGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCGGNGK*CSTASI
Trigger: GATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCC...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTAACAAAAACTCTTCTTaGTATGGAGGCAACGGGAAA +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSNKNSS*YGGNGK
Trigger: TTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCTCCTAACAACACTTTaGCCCCTTACAGTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASLLTTL*PLTVCR
Trigger: ACGGCACACTGTAAGGGGGCAAAGTGTTGTTAGGAG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGTGTACAATGGCAACTTaGAGAACCTTTCCCCTACTC +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWCTMAT*RTFPLL
Trigger: GAGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACA...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAAACACACAGCCACTTTaGTCTGAGATTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRNTQPL*SEILQG
Trigger: GCCCTGCAGAATCTCAGAGCAAAGTGGCTGTGTGTT...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAACATGGCTTAGATGCTaGCCACAGTGGGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRTWLRC*PQWVCL
Trigger: CAGACAAACCCACTGTGGGCAGCATCTAAGCCATGT...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTGCAGAAGCCCCAGCTTaGTCCAGACTTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSAEAPA*SRLGRL
Trigger: GAGCCTGCCAAGTCTGGAGCAAGCTGGGGCTTCTGC...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCGGTTGCTCCAGTGATTaGCCTCTTCCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASGCSSD*PLPQTP
Trigger: AGGAGTTTGAGGAAGAGGCCAATCACTGGAGCAACC...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTTATATATTGGTAATGTaGAGGCACAGACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: RSTGQAPARNTQPLCSEIYILVM*RHRHSH
Trigger: ATGGGAATGTCTGTGCCTCCACATTACCAATATATA...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTTGTAAGAAAATGCATTaGCTGCATTCACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: RSTGQAPARNTQPLCSEICKKMH*LHSHKS
Trigger: GCTTTTGTGTGAATGCAGCCAATGCATTTTCTTACA...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GGATCCTGCTTACTTCCTCCTATCCCTGGGGGCTTGCCCACCTCTCTTGTGAGTCAGCAGACAGGTGAATaGTCCTTCTCATTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: GSCLLPPIPGGLPTSLVSQQTGE*SFSLFK
Trigger: TTTAAACAATGAGAAGGACCATTCACCTGTCTGCTG...ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGGAGGAAGTAAGCAGGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGTCTCCTTCCCGATCTaGAGGAAAGCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLVSFPI*RKAAQS
Trigger: ACTCTGAGCTGCTTTCCTCCAGATCGGGAAGGAGAC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCCACCTCTCTTGTGAGTaGGGCATAGGGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCHLSCE*GIGAGC
Trigger: ACACCCAGCCCCTATGCCCCACTCACAAGAGAGGTG...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTAGCCACCAGCCCCTATaGCAGACCTGGGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSSHQPL*QTWDGN
Trigger: GTTGCCATCCCAGGTCTGCCATAGGGGCTGGTGGCT...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTGGGGTGACTAGTCCCTaGCTGGGTAGGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSGVTSP*LGRWEG
Trigger: TCCTTCCCACCTACCCAGCCAGGGACTAGTCACCCC...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCTGGGGGTAGGCTCGTaGATGTGTGTGCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQLGVGS*MCVPLE
Trigger: CTCTAGTGGCACACACATCCACGAGCCTACCCCCAG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGCGGTCCCCACAAATaGGACAGGTTCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQRGPHK*DRFVVQ
Trigger: CTGAACAACGAACCTGTCTCATTTGTGGGGACCGCG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGAGCCCTCACAGGAGATaGTCCCATAGTGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQSPHRR*SHSASL
Trigger: CAGGCTTGCACTATGGGATCATCTCCTGTGAGGGCT...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCGCTGATAACAGCTGGTaGATCAGACTGTATGACTGG +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASADNSW*IRLYDW
Trigger: CCAGTCATACAGTCTGATTCACCAGCTGTTATCAGC...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAGCTGATAACAGCTGGTaGATCAGACTGTATGACTGG +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRADNSW*IRLYDW
Trigger: CCAGTCATACAGTCTGATTCACCAGCTGTTATCAGC...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTGGCACGTGTAATCCTTaGTTGAGAGCTCGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPGTCNP*LRARRR
Trigger: TCTTCTGCGAGCTCTCAATCAAGGATTACACGTGCC...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGGCGAGTACTTGGCAGTaGCATCAGCCAGTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQASTWQ*HQPVPQ
Trigger: TTGGGGAACTGGCTGATGTCACTGCCAAGTACTCGC...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCATACTCCTCGTTGCTaGCCTTTAGCTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASHTPRC*PLADGT
Trigger: AGTTCCATCAGCTAAAGGTCAGCAACGAGGAGTATG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGGGAAAGCGGTTCGGCTaGTGTGTGTATTTATATTCA +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWGKRFG*CVYLYS
Trigger: TGAATATAAATACACACATCAGCCGAACCGCTTTCC...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCAGGGCTCTCGGCAATaGATGGGCTCTTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSQGSRQ*MGSLFC
Trigger: ACAGAACAAAGAGCCCATTCATTGCCGAGAGCCCTG...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGTCTCCTCATAATACCTaGGTTTGCAATGCAACACAT +
Preference number: 4 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSSPHNT*VCNATH
Trigger: ATGTGTTGCATTGCAAACTCAGGTATTATGAGGAGA...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGAGCTTTCTGTCCTGCTaGGAGGCCAGGGTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQSFLSC*EARVPL
Trigger: TAAGGGAACCCTGGCCTCTCAGCAGGACAGAAAGCT...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATATTGGTCATGGAGGGTTaGTGGAGTCAGGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAILVMEG*WSQAGG
Trigger: CCCGCCAGCCTGACTCCATCAACCCTCCATGACCAA...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCACTATCACCATGGTTaGTCCAGTGATTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASHYHHG*SSDWPL
Trigger: AAGAGGCCAATCACTGGAGCAACCATGGTGATAGTG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTTGATCCAGGCAATCTaGCTAAAGAGCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLLIQAI*LKSSSS
Trigger: CGACGAGCTGCTCTTTAGGCAGATTGCCTGGATCAA...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCTGGTCTTGCAGGAATaGAGCACCACCTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLLVLQE*STTLKR
Trigger: CCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACCAG...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCTCCAGAGCCTGTCCTaGCCACCCAAGACGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCLQSLS*PPKTLW
Trigger: CCACAGCGTCTTGGGTGGGCAGGACAGGCTCTGGAG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGGGCAACGGGAAATGCTaGTCCACAGCCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQGNGKC*STASIL
Trigger: CAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCC...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTGGAGGCAACGGGAAATaGTGCTCCACAGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSGGNGK*CSTASI
Trigger: GATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCC...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGATTTGCTCTGAGATTCTaGAGGGCTCTCGGCAATGAA +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRFALRF*RALGNE
Trigger: TTCATTGCCGAGAGCCCTGCAGAATCTCAGAGCAAA...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGGATTCCCCATTCCTTaGTCTGGTTCTGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLGFPIP*SGSGKQ
Trigger: CTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTGAGTGGTGCTCCCTATaGCCTGGAGCACAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSEWCSL*PGAQEG
Trigger: TCCTTCCTGTGCTCCAGGGCATAGGGAGCACCACTC...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTCGGTTCATCCCCATCTaGAGGCATTTGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSRFIPI*RHLSRR
Trigger: CCGCCTGCTCAAATGCCTCCAGATGGGGATGAACCG...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGGTTGCTCCAGTGATTaGCCTCTTCCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLGCSSD*PLPQTP
Trigger: AGGAGTTTGAGGAAGAGGCCAATCACTGGAGCAACC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTTCCCAGGGGAACTGTaGTCACTATCACCATGGTTG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPFPGEL*SLSPWL
Trigger: CAACCATGGTGATAGTGACCACAGTTCCCCTGGGAA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTAGGCTGCGAGCTTGTTaGGGCAGAAGTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSRLRAC*GRSGEW
Trigger: CCACTCACCACTTCTGCCCCAACAAGCTCGCAGCCT...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCATCTTCAATCAACATaGGCGTGCCCAATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASHLQST*ACPMVP
Trigger: TGGAACCATTGGGCACGCCCATGTTGATTGAAGATG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAAGTTCCACAGACCTACTaGAAGACAGTGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKVPQTY*KTVWSL
Trigger: CAGGCTCCACACTGTCTTCCAGTAGGTCTGTGGAAC...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACGGCATTCTGCTCAGCTaGTTTTTCAAAGGGCCAATA +
Preference number: 4 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDGILLS*FFKGPI
Trigger: TATTGGCCCTTTGAAAAACCAGCTGAGCAGAATGCC...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGGGGCTCTTTGTTCTGTaGAATCTGCTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWGLFVL*NLLQTF
Trigger: AAATGTTTGCAGCAGATTCCACAGAACAAAGAGCCC...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAGCTCTCGGCAATGAATaGGCTCTTTGTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRALGNE*ALCSVE
Trigger: TTCCACAGAACAAAGAGCCCATTCATTGCCGAGAGC...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTTCAGCCCGATCATCTaGAACAGAAATAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPFSPII*NRNSAW
Trigger: CCAGGCACTATTTCTGTTTCAGATGATCGGGCTGAA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCACTCCTGCCCAGACATaGTCCTTTCGATTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASTPAQT*SFRFLL
Trigger: AAGAAGAAATCGAAAGGATCATGTCTGGGCAGGAGT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCATGGTTGCTCCAGTaGTTGGCCTCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQPWLLQ*LASSSN
Trigger: GTTTGAGGAAGAGGCCAATCACTGGAGCAACCATGG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCATACTCCTCGTTGCTaGCCTTTAGCTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPHTPRC*PLADGT
Trigger: AGTTCCATCAGCTAAAGGTCAGCAACGAGGAGTATG...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTGCATGTGCATCATGTTaGAGGCCATACATTCAACTC +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSACASC*RPYIQL
Trigger: GAGTTGAATGTATGGCCTTCAACATGATGCACATGC...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ATATGGTCACTGTGCCCTACTCTCTTAATTTTCACGCTTTCCAAGGAAAGGACGTTGCCACACTGGCTGTaGAAGATACCTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: IWSLCPTLLIFTLSKERTLPHWL*KIPGCR
Trigger: CCTACACCCAGGTATCTTTCACAGCCAGTGTGGCAA...CGTCCTTTCCTTGGAAAGCGTGAAAATTAAGAGAGTAGGGCACAGTGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGACAAGAATCTTCCCACTaGCGTGAAAAACATGCTAGC +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRQESSH*REKHAS
Trigger: GCTAGCATGTTTTTCACGTCAGTGGGAAGATTCTTG...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGGCAGCCAGAGAGCATaGATAAGTTCCAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSGSQRA*ISSKMP
Trigger: TGGCATCTTGGAACTTATTCATGCTCTCTGGCTGCC...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGATAAAAGGGCTGGTCTaGAAGACTGGATTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWIKGLV*KTGFLK
Trigger: TTTTAAGAATCCAGTCTTTCAGACCAGCCCTTTTAT...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGCCTGGGTCAAGCTCTaGCAATTCATCCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSAWVKL*QFILTE
Trigger: TTCTGTCAGGATGAATTGGCAGAGCTTGACCCAGGC...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGTGGCACCTGTTCCTCTaGTTCCGAGACATGACACAG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQWHLFL*FRDMTQ
Trigger: CTGTGTCATGTCTCGGAAGCAGAGGAACAGGTGCCA...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTCTTCCTCAAACTCCTaGCCAGACATGATCCTTTCG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPSSSNS*PDMILS
Trigger: CGAAAGGATCATGTCTGGGCAGGAGTTTGAGGAAGA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAACTGGGGATCCAGGCTaGGAGCTTGTTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAITGDPG*ELVGAE
Trigger: TTCTGCCCCAACAAGCTCGCAGCCTGGATCCCCAGT...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCACAATCAACATGGGCGTaGCCAATGGTTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPQSTWA*PMVPGP
Trigger: AGGACCTGGAACCATTGGGCACGCCCATGTTGATTG...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAACAAAAACTCTTCTTaGTATGGAGGCAACGGGAAA +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWNKNSS*YGGNGK
Trigger: TTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGAGAAAATGCATTGGCTaGATTCACACAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWRKCIG*IHTKAC
Trigger: ACATGCTTTTGTGTGAATGCAGCCAATGCATTTTCT...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCACTAAGTGGTCTGCTTaGCACACTGGCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLTKWSA*HTGCER
Trigger: TCTTTCACAGCCAGTGTGGCAAGCAGACCACTTAGT...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTATAGGCAGAAGAAGGTaGCGTGGGCCCTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSIGRRR*RGPFQP
Trigger: AGGTTGGAAGGGCCCACGGCACCTTCTTCTGCCTAT...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTAAAGGCAGAGGGGAGTaGAAGGGAACTCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSKGRGE*KGTLMG
Trigger: GCCCATGAGAGTTCCCTTGCACTCCCCTCTGCCTTT...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTTCCGATATCTGGACTaGCCCAATGCTCTTATTCCG +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPFRYLD*PNALIP
Trigger: CGGAATAAGAGCATTGGGCCAGTCCAGATATCGGAA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTCTTCTTCCGATATCTaGACTGGCCCAATGCTCTTA +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSSSSDI*TGPMLL
Trigger: TAAGAGCATTGGGCCAGTCCAGATATCGGAAGAAGA...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAAGGCTGCGAGCTTGTTaGGGCAGAAGTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIRLRAC*GRSGEW
Trigger: CCACTCACCACTTCTGCCCCAACAAGCTCGCAGCCT...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGAAGGACTTTGCCTAGATaGAAAGTTCGCAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRRTLPR*KVRSGR
Trigger: TCTACCACTGCGAACTTTCCATCTAGGCAAAGTCCT...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp ATATGGTCACTGTGCCCTACTCTCTTAATTTTCACGCTTTCCAAGGAAAGGACGCCCCATTCCTTGCTCTaGTTCTGGGAAACAGGACAG +
Preference number: 4 (lower is better)
Translates to: IWSLCPTLLIFTLSKERTPHSLL*FWETGQ
Trigger: CTGTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGG...CGTCCTTTCCTTGGAAAGCGTGAAAATTAAGAGAGTAGGGCACAGTGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTCCATGGTTGCTCCAGTaGTTGGCCTCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSPWLLQ*LASSSN
Trigger: GTTTGAGGAAGAGGCCAATCACTGGAGCAACCATGG...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCTGTGATAGAGGTAGATaGGCCGCTCGATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSCDRGR*AARSPP
Trigger: TGGAGGTGATCGAGCGGCTCATCTACCTCTATCACA...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAGACCCCTGATATCTTaGTTTAGGAAGTTAATTGCT +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWRPLIS*FRKLIA
Trigger: AGCAATTAACTTCCTAAATCAAGATATCAGGGGTCT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACAGGGGGCAGCAAGGTGTaGGAACAGAAATTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTGGSKV*EQKFFC
Trigger: GCAGAAGAATTTCTGTTCTCACACCTTGCTGCCCCC...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATGGTCAGCAGACAGGTaGATGGTCCTTCTCATTGTT +
Preference number: 4 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKWSADR*MVLLIV
Trigger: AACAATGAGAAGGACCATTCACCTGTCTGCTGACCA...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGAGAGCAATTTCTTTTaGCACCCAACACAACGGGTA +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLESNFF*HPTQRV
Trigger: TACCCGTTGTGTTGGGTGTCAAAAGAAATTGCTCTC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCATTGATGTGGAGTGGGTaGCATTCAGTGATGCCACAG +
Preference number: 4 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPLMWSG*HSVMPQ
Trigger: CTGTGGCATCACTGAATGTCACCCACTCCACATCAA...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCTTAAATACACATCCCTaGGCTGTGGCCCCAGAAACC +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCLNTHP*AVAPET
Trigger: GGTTTCTGGGGCCACAGCTCAGGGATGTGTATTTAA...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAGTTCTTGTCACGACTaGATCGATATACCCGTTTGT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASSSCHD*IDIPVC
Trigger: ACAAACGGGTATATCGATGCAGTCGTGACAAGAACT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATATCTGGACTGGCCCAATaGTCTTATTCCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAISGLAQ*SYSGLQ
Trigger: CTGGAGGCCGGAATAAGAGCATTGGGCCAGTCCAGA...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCTCTTCCTCAAACTCCTaGCCAGACATGATCCTTTCG +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSSSSNS*PDMILS
Trigger: CGAAAGGATCATGTCTGGGCAGGAGTTTGAGGAAGA...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACAAGCAGGATTAGCTCCTaGCACGTAGAGCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTSRISS*HVELKR
Trigger: CCTCTTGAGCTCTACGTGGCAGGAGCTAATCCTGCT...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCTGGTCTTGCAGGAATaGAGCACCACCTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQLVLQE*STTLKR
Trigger: CCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACCAG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAGGCAACGGGAAATGCTaGTCCACAGCCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIGNGKC*STASIL
Trigger: CAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCC...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCGGAGGCAACGGGAAATaGTGCTCCACAGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCGGNGK*CSTASI
Trigger: GATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCC...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGGGTGGAAGGACACCTaGCTTAAATATGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSGWKDT*LKYGHC
Trigger: ACAGTGACCATATTTAAGGCAGGTGTCCTTCCACCC...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAACTCAGCAAAGAACGATaGTGTACACAGGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKLSKER*CTQELS
Trigger: AGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAG...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTGGAGAGACATGTTCTTaGCTCATCAGAGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSGETCS*LIREQF
Trigger: AAATTGCTCTCTGATGAGGCAAGAACATGTCTCTCC...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTCTTCTTCCGATATCTaGACTGGCCCAATGCTCTTA +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLSSSDI*TGPMLL
Trigger: TAAGAGCATTGGGCCAGTCCAGATATCGGAAGAAGA...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCACCTGGAAGACAGTGTaGAGCCTGGTGAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCTWKTV*SLVRAG
Trigger: ACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTTCAGTTCCACAGACCTaGAAGACAGTGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSSVPQT*KTVWSL
Trigger: CAGGCTCCACACTGTCTTCCAGGTCTGTGGAACTGA...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416460.6
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTATCAGACTGTATGACTaGGGATCCAGGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSIRLYD*GSRLRA
Trigger: AGCTCGCAGCCTGGATCCCCAGTCATACAGTCTGAT...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCATCTTCAATCAACATaGGCGTGCCCAATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSHLQST*ACPMVP
Trigger: TGGAACCATTGGGCACGCCCATGTTGATTGAAGATG...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTCCACAGCCTCCATCTTaGTCTCTCTGGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSPQPPS*SLWLFP
Trigger: AGGGAAAAGCCAGAGAGACCAAGATGGAGGCTGTGG...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCCCACAGCCTCCATCTTaGTCTCTCTGGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSPQPPS*SLWLFP
Trigger: AGGGAAAAGCCAGAGAGACCAAGATGGAGGCTGTGG...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGTGTAAGAAAATGCATTaGCTGCATTCACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWCKKMH*LHSHKS
Trigger: GCTTTTGTGTGAATGCAGCCAATGCATTTTCTTACA...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTGTAAGGAACACGTCCTaGGATAAGGTGGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSVRNTS*DKVGQV
Trigger: TACCTGCCCCACCTTATCCCAGGACGTGTTCCTTAC...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGGCTGGTCTGAAAGACTaGATTCTTAAAATAATTGCA +
Preference number: 4 (lower is better)
Translates to: SWEASPVDQVIARTLPRWAGLKD*ILKIIA
Trigger: TGCAATTATTTTAAGAATCCAGTCTTTCAGACCAGC...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAAATGGCAGACCTGGGATaGCAACACAGACAAAAACAC +
Preference number: 4 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKMADLG*QHRQKH
Trigger: GTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCAT...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACACCCCTATGGCAGACCTaGGATGGCAACACAGACAAA +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTPLWQT*DGNTDK
Trigger: TTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGGGG...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCGCGGTCCCCACAAATaGGACAGGTTCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCRGPHK*DRFVVQ
Trigger: CTGAACAACGAACCTGTCTCATTTGTGGGGACCGCG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCAGCCCTCACAGGAGATaGTCCCATAGTGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCSPHRR*SHSASL
Trigger: CAGGCTTGCACTATGGGATCATCTCCTGTGAGGGCT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCCATACTCCTCGTTGCTaGCCTTTAGCTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCHTPRC*PLADGT
Trigger: AGTTCCATCAGCTAAAGGTCAGCAACGAGGAGTATG...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGGAAAGCGGTTCGGCTaGTGTGTGTATTTATATTCA +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLGKRFG*CVYLYS
Trigger: TGAATATAAATACACACATCAGCCGAACCGCTTTCC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTCTGGGGAAACGGCATTaGGGAGTAATGTTCCGAGTT +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSLGKRH*GVMFRV
Trigger: AACTCGGAACATTACTCCTCAATGCCGTTTCCCCAG...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGAGCTGGAGCTTTTCCTaGGGAACATGTCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQSWSFS*GTCLFL
Trigger: AAGGAAGAGACATGTTCCTCAGGAAAAGCTCCAGCT...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTAAGCAGCTCAGAGTCTaGCCTGTGGCCAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSKQLRV*PVAKEC
Trigger: ACATTCTTTGGCCACAGGTCAGACTCTGAGCTGCTT...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTGCCTGGGTCAAGCTCTaGCAATTCATCCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSAWVKL*QFILTE
Trigger: TTCTGTCAGGATGAATTGGCAGAGCTTGACCCAGGC...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCAGTTCTTGTCACGACTaGATCGATATACCCGTTTGT +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLSSCHD*IDIPVC
Trigger: ACAAACGGGTATATCGATGCAGTCGTGACAAGAACT...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCCCACACTGGTCTTaGAGGAATGCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCCPHWS*RNAAPP
Trigger: AGGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAGAACATGGCATTCTaGTCAGCTGGTTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLQNMAF*SAGFSK
Trigger: CTTTGAAAAACCAGCTGAGCAGAATGCCATGTTCTG...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCATCTTCAATCAACATaGGCGTGCCCAATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQHLQST*ACPMVP
Trigger: TGGAACCATTGGGCACGCCCATGTTGATTGAAGATG...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCCATCTTCAATCAACATaGGCGTGCCCAATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCHLQST*ACPMVP
Trigger: TGGAACCATTGGGCACGCCCATGTTGATTGAAGATG...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACCACAGCCTCCATCTTaGTCTCTCTGGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIPQPPS*SLWLFP
Trigger: AGGGAAAAGCCAGAGAGACCAAGATGGAGGCTGTGG...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAGTTCCACAGACCTACTaGAAGACAGTGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIVPQTY*KTVWSL
Trigger: CAGGCTCCACACTGTCTTCCAGTAGGTCTGTGGAAC...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373584.7
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCGCCCTTAGGACTTGTTaGGTGGAAGGACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCALRTC*VEGHLP
Trigger: AGGCAGGTGTCCTTCCACCCAACAAGTCCTAAGGGC...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCGCAGCTGAGCCACTCTaGGCCTTGGGCTTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KYRELRNKQIHTNTQESSAAEPL*ALGFVS
Trigger: GGACACAAAGCCCAAGGCCCAGAGTGGCTCAGCTGC...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAGACCAACCTTGGACATaGCTTAGATGCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIDQPWT*LRCCPQ
Trigger: CTGTGGGCAGCATCTAAGCCATGTCCAAGGTTGGTC...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCGCTATCATTTGGTCATaGAGGGTTGATGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCAIIWS*RVDGVR
Trigger: CCTGACTCCATCAACCCTCCATGACCAAATGATAGC...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATATGCAAATGCTCCGCTTaGAAAACCCTTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAICKCSA*KTLCSP
Trigger: AGGGCTGCAAAGGGTTTTTCAAGCGGAGCATTTGCA...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTGCTGATAACAGCTGGTaGATCAGACTGTATGACTGG +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSADNSW*IRLYDW
Trigger: CCAGTCATACAGTCTGATTCACCAGCTGTTATCAGC...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGTGATAGAGGTAGATaGGCCGCTCGATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCCDRGR*AARSPP
Trigger: TGGAGGTGATCGAGCGGCTCATCTACCTCTATCACA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAGACCCCTGATATCTTaGTTTAGGAAGTTAATTGCT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASRPLIS*FRKLIA
Trigger: AGCAATTAACTTCCTAAATCAAGATATCAGGGGTCT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGGCATGTGCATCATGTTaGAGGCCATACATTCAACTC +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQACASC*RPYIQL
Trigger: GAGTTGAATGTATGGCCTTCAACATGATGCACATGC...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp ATATGGTCACTGTGCCCTACTCTCTTAATTTTCACGCTTTCCAAGGAAAGGACGGCATGTGCATCATGTTaGAGGCCATACATTCAACTC +
Preference number: 4 (lower is better)
Translates to: IWSLCPTLLIFTLSKERTACASC*RPYIQL
Trigger: GAGTTGAATGTATGGCCTTCAACATGATGCACATGC...CGTCCTTTCCTTGGAAAGCGTGAAAATTAAGAGAGTAGGGCACAGTGACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGTGCCCTACTACCCTTTaGAGAAAACAAGGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQCPTTL*RKQGER
Trigger: CCTTTCACCTTGTTTTCTTCAAAGGGTAGTAGGGCA...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCAATCAACATGGGCGTaGCCAATGGTTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCQSTWA*PMVPGP
Trigger: AGGACCTGGAACCATTGGGCACGCCCATGTTGATTG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCAGCAGGATTAGCTCCTaGCACGTAGAGCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCSRISS*HVELKR
Trigger: CCTCTTGAGCTCTACGTGGCAGGAGCTAATCCTGCT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAGAAAATGCATTGGCTaGATTCACACAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASRKCIG*IHTKAC
Trigger: ACATGCTTTTGTGTGAATGCAGCCAATGCATTTTCT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTTGCCCCCTTACAGTGTaGCGTTTTATCTGGCAATTC +
Preference number: 4 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSCPLTV*RFIWQF
Trigger: GAATTGCCAGATAAAACGGCACACTGTAAGGGGGCA...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTTTCCGATATCTGGACTaGCCCAATGCTCTTATTCCG +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSFRYLD*PNALIP
Trigger: CGGAATAAGAGCATTGGGCCAGTCCAGATATCGGAA...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTTTCCGATATCTGGACTaGCCCAATGCTCTTATTCCG +
Preference number: 4 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSFRYLD*PNALIP
Trigger: CGGAATAAGAGCATTGGGCCAGTCCAGATATCGGAA...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAGGTTGCTCCAGTGATTaGCCTCTTCCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIGCSSD*PLPQTP
Trigger: AGGAGTTTGAGGAAGAGGCCAATCACTGGAGCAACC...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCATCAGACTGTATGACTaGGGATCCAGGCTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCIRLYD*GSRLRA
Trigger: AGCTCGCAGCCTGGATCCCCAGTCATACAGTCTGAT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACCGATCATTAGTGCCTaGGTCAAGCTCTGCCAATTC +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIPIISA*VKLCQF
Trigger: GAATTGGCAGAGCTTGACCCAGGCACTAATGATCGG...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373584.7
ENST00000416460.6
CDS-3UTR CCA 90 bp ACACCAAACCTCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAAAAACTGGTCTCACTCTaGAGAGAAAAGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: TPNLPSNLSPCPSNQIHKKLVSL*REKENL
Trigger: CAAGTTCTCCTTTTCTCTCCAGAGTGAGACCAGTTT...TTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGAGGTTTGGTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACAGTCCCTGAGGAAAACTaGTCTCACTCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTVPEEN*SHSGEK
Trigger: TTTCTCTCCAGAGTGAGACCAGTTTTCCTCAGGGAC...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCCTTCTCAGAGCAACTaGGGAAACGGCATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCPSQSN*GNGIEE
Trigger: CTCCTCAATGCCGTTTCCCCAGTTGCTCTGAGAAGG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCTGTAGTGCAAGGAGGTaGGATTCTCCTTTTCCATGT +
Preference number: 4 (lower is better)
Translates to: KETITIRHGLPSMHTTWCCSARR*DSPFPC
Trigger: ACATGGAAAAGGAGAATCCCACCTCCTTGCACTACA...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp TCACCAACCTTGCTTAGTGAATCTCCTAACAACACTTaGCCCCCTTACAGTGTGCCGTTTTATCTGGCAATT +
Preference number: 4 (lower is better)
Translates to: SPTLLSESPNNT*PPYSVPFYLAI
Trigger: AATTGCCAGATAAAACGGCACACTGTAAGGGGGCAAAGTGTTGTTAGGAGATTCACTAAGCAAGGTTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTACTCCTGCCCAGACATaGTCCTTTCGATTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSTPAQT*SFRFLL
Trigger: AAGAAGAAATCGAAAGGATCATGTCTGGGCAGGAGT...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACAGTAGCTTTACTAGGTTaGGTTGAGGAGACAGCAAAC +
Preference number: 4 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTVALLG*VEETAN
Trigger: GTTTGCTGTCTCCTCAACTCAACCTAGTAAAGCTAC...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTTGATCCAGGCAATCTaGCTAAAGAGCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCLIQAI*LKSSSS
Trigger: CGACGAGCTGCTCTTTAGGCAGATTGCCTGGATCAA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCTGGTCTTGCAGGAATaGAGCACCACCTTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCLVLQE*STTLKR
Trigger: CCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACCAG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCGGCAACGGGAAATGCTaGTCCACAGCCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: KYRELRNKQIHTNTQESSGNGKC*STASIL
Trigger: CAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCC...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCAGAAAATGCATTGGCTaGATTCACACAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLRKCIG*IHTKAC
Trigger: ACATGCTTTTGTGTGAATGCAGCCAATGCATTTTCT...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCCCGTCTCACCAACCTTaGTTAGTGAATCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSPSHQP*LVNLLT
Trigger: TGTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGG...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTAGTGTCTATTCTTTTTaGAGTCTGGCCTTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSSVYSF*SLALPY
Trigger: GTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTATATATTGGTAATGTaGAGGCACAGACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPYILVM*RHRHSH
Trigger: ATGGGAATGTCTGTGCCTCCACATTACCAATATATA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCATTCCTTGCCCACACTaGTCTTGCAGGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCIPCPH*SCRNAA
Trigger: TGCTGCATTCCTGCAAGACCAGTGTGGGCAAGGAAT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCCGATCATTAGTGCCTaGGTCAAGCTCTGCCAATTC +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCPIISA*VKLCQF
Trigger: GAATTGGCAGAGCTTGACCCAGGCACTAATGATCGG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373584.7
ENST00000416460.6
CDS-3UTR CCA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTGTAAGAAAATGCATTaGCTGCATTCACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPCKKMH*LHSHKS
Trigger: GCTTTTGTGTGAATGCAGCCAATGCATTTTCTTACA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCTTCAAAAATAATAATTaGACAGATAGAGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASFKNNN*TDRGLS
Trigger: GCTGAGGCCTCTATCTGTCCAATTATTATTTTTGAA...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCTGGAGTTCCCGCCTTaGAGGAAACAGTTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCLEFPP*RKQFRY
Trigger: ATACCTGAACTGTTTCCTCCAAGGCGGGAACTCCAG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTCTTCCTCAAACTCCTaGCCAGACATGATCCTTTCG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCSSSNS*PDMILS
Trigger: CGAAAGGATCATGTCTGGGCAGGAGTTTGAGGAAGA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTTCCGATATCTGGACTaGCCCAATGCTCTTATTCCG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCFRYLD*PNALIP
Trigger: CGGAATAAGAGCATTGGGCCAGTCCAGATATCGGAA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATATCTTCTTCCGATATCTaGACTGGCCCAATGCTCTTA +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAISSSDI*TGPMLL
Trigger: TAAGAGCATTGGGCCAGTCCAGATATCGGAAGAAGA...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR CAA 72 bp CTCTGTTCAATACTACGTTGTTGGAGAGACATGTTCTaGCCTCATCAGAGAGCAATTTCTTTTGACACCCAA +
Preference number: 4 (lower is better)
Translates to: LCSILRCWRDMF*PHQRAISFDTQ
Trigger: TTGGGTGTCAAAAGAAATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCAACAACGTAGTATTGAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp TTGCAGAACCTTTCCCCTACTCCACAAATTAACAACTaGCTCTGTTCAATACTACGTTGTTGGAGAGACATG +
Preference number: 4 (lower is better)
Translates to: LQNLSPTPQINN*LCSILRCWRDM
Trigger: CATGTCTCTCCAACAACGTAGTATTGAACAGAGCAAGTTGTTAATTTGTGGAGTAGGGGAAAGGTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp CTGTGGAATCTGCTGCAAACATTTGTAAAACTGGATTaGTACAATGGCAACTTGCAGAACCTTTCCCCTACT +
Preference number: 4 (lower is better)
Translates to: LWNLLQTFVKLD*YNGNLQNLSPT
Trigger: AGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACAAATCCAGTTTTACAAATGTTTGCAGCAGATTCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCGGCACGTGTAATCCTTaGTTGAGAGCTCGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KYRELRNKQIHTNTQESSGTCNP*LRARRR
Trigger: TCTTCTGCGAGCTCTCAATCAAGGATTACACGTGCC...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCTCCTGGCTAACGTGGTaGAACAATGTTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSSWLTW*NNVSTK
Trigger: TTTAGTAGAAACATTGTTTCACCACGTTAGCCAGGA...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATATGCCGTTTCTCATCCTaGCACACAGATAAAACATCA +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAICRFSS*HTDKTS
Trigger: TGATGTTTTATCTGTGTGTCAGGATGAGAAACGGCA...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCCAACACTTGGTGGAATaGCTGCCGTTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: KYRELRNKQIHTNTQESSQHLVE*LPFLIL
Trigger: CAGGATGAGAAACGGCAGTCATTCCACCAAGTGTTG...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTCTTCTTCCGATATCTaGACTGGCCCAATGCTCTTA +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCSSSDI*TGPMLL
Trigger: TAAGAGCATTGGGCCAGTCCAGATATCGGAAGAAGA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCTATTCAGTAAAATCCTaGCAAATGTACCAGTATCGT +
Preference number: 4 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSYSVKS*QMYQYR
Trigger: ACGATACTGGTACATTTGCCAGGATTTTACTGAATA...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCAAACTCTTCTTGCTATaGAGGCAACGGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCKLFLL*RQREML
Trigger: CAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCATTCTTTTTGCAGTCTaGCCTTGCCCTACTACCCTT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCILFAV*PCPTTL
Trigger: AAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAAT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCGAAACAGTTCAGGTATaGCTCCCAAGCCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCETVQV*LPSPEK
Trigger: TTTTTCTGGGCTTGGGAGCCATACCTGAACTGTTTC...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAAACAAAAACTCTTCTTaGTATGGAGGCAACGGGAAA +
Preference number: 4 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAINKNSS*YGGNGK
Trigger: TTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGTATTCAGTAAAATCCTaGCAAATGTACCAGTATCGT +
Preference number: 4 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQYSVKS*QMYQYR
Trigger: ACGATACTGGTACATTTGCCAGGATTTTACTGAATA...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR GCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCAACAAAAACTCTTCTTaGTATGGAGGCAACGGGAAA +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCNKNSS*YGGNGK
Trigger: TTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CCA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTTATTCAGTAAAATCCTaGCAAATGTACCAGTATCGT +
Preference number: 4 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSYSVKS*QMYQYR
Trigger: ACGATACTGGTACATTTGCCAGGATTTTACTGAATA...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTCAATACTACGTTGTTaGAGAGACATGTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCSILRC*RDMFLP
Trigger: AGGCAAGAACATGTCTCTCCAACAACGTAGTATTGA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
3UTR CAA 72 bp GAGACATGTTCTTGCCTCATCAGAGAGCAATTTCTTTaGACACCCAACACAACGGGTAAAATGTTTAATTTG +
Preference number: 4 (lower is better)
Translates to: ETCSCLIREQFL*TPNTTGKMFNL
Trigger: CAAATTAAACATTTTACCCGTTGTGTTGGGTGTCAAAAGAAATTGCTCTCTGATGAGGCAAGAACATGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR TCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCAGACCCCTGATATCTTaGTTTAGGAAGTTAATTGCT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCRPLIS*FRKLIA
Trigger: AGCAATTAACTTCCTAAATCAAGATATCAGGGGTCT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR TCA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCGGAAAGCGGTTCGGCTaGTGTGTGTATTTATATTCA +
Preference number: 4 (lower is better)
Translates to: KYRELRNKQIHTNTQESSGKRFG*CVYLYS
Trigger: TGAATATAAATACACACATCAGCCGAACCGCTTTCC...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CCA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTATATATTGGTAATGTaGAGGCACAGACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCYILVM*RHRHSH
Trigger: ATGGGAATGTCTGTGCCTCCACATTACCAATATATA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
3UTR CAA 72 bp CAAACATTTGTAAAACTGGATTTGTACAATGGCAACTaGCAGAACCTTTCCCCTACTCCACAAATTAACAAC +
Preference number: 4 (lower is better)
Translates to: QTFVKLDLYNGN*QNLSPTPQINN
Trigger: GTTGTTAATTTGTGGAGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACAAATCCAGTTTTACAAATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS GCA 90 bp CCTCCCCCTCCGCTAGGCGGCGGTTCGTCCCGCTCCATGCGGTGGTaGCTAGGGTCCGCGCCGGGTTTGTTGCTCCGCCATGACCGGCGC +
Preference number: 5 (lower is better)
Translates to: PPPPLGGGSSRSMRW*LGSAPGLLLRHDRR
Trigger: GCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGACGAACCGCCGCCTAGCGGAGGGGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CCA 90 bp CCGCCTCCCCCTCCGCTAGGCGGCGGTTCGTCCCGCTCCATGCGGTaGTGCCTAGGGTCCGCGCCGGGTTTGTTGCTCCGCCATGACCGG +
Preference number: 5 (lower is better)
Translates to: PPPPPLGGGSSRSMR*CLGSAPGLLLRHDR
Trigger: CCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGACGAACCGCCGCCTAGCGGAGGGGGAGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACCCCATCTGGAGGCATTaGAGCAGGCGGCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNPIWRH*SRRQYW
Trigger: CCAGTACTGCCGCCTGCTCAAATGCCTCCAGATGGG...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CCA 90 bp TGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTaGAACAGGTCATTCCTTGCCCACACTGGTCTTGCAGGAATGCAG +
Preference number: 5 (lower is better)
Translates to: CPAHPRRCGWPEEGA*NRSFLAHTGLAGMQ
Trigger: CTGCATTCCTGCAAGACCAGTGTGGGCAAGGAATGACCTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACACTGGGGAAACGGCATaGAGGAGTAATGTTCCGAGT +
Preference number: 5 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNTGETA*RSNVPS
Trigger: ACTCGGAACATTACTCCTCAATGCCGTTTCCCCAGT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACACACAACTTTTGTTCTaGGGCTTGGAGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNTQLLF*GLEQAL
Trigger: CAGAGCCTGCTCCAAGCCCAAGAACAAAAGTTGTGT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS GCA 90 bp GTTCCACAGACCTGGAAGACAGTGTGGAGCCTGGTGAGGGCTGGTTaGTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGGTCACTATCAC +
Preference number: 5 (lower is better)
Translates to: VPQTWKTVWSLVRAG*SPKPCSQGNCGHYH
Trigger: GTGATAGTGACCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGTCTGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS GCA 90 bp CCACAGACCTACTGGAAGACAGTGTGGAGCCTGGTGAGGGCTGGTTaGTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGGTCACTATCAC +
Preference number: 5 (lower is better)
Translates to: PQTYWKTVWSLVRAG*SPKPCSQGNCGHYH
Trigger: GTGATAGTGACCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGTAGGTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000475178.1
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCGCCGAGGGGAGGAGGTaGTCAGGAGCCCGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASAEGRR*SGAREL
Trigger: GAGCTCGCGGGCTCCTGACAACCTCCTCCCCTCGGC...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTGGGTCCGCGCCGGGTTaGTTGCTCCGCCATGACCGG +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSGSAPG*LLRHDR
Trigger: CCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCC...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAAGGTGCGGTATATATaGGTAATGTGGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNKVRYI*VMWRHR
Trigger: TCTGTGCCTCCACATTACCAATATATACCGCACCTT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAAGAAAGGCAGTTTCTaGATCCAGGCAATCTGCCTA +
Preference number: 5 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNKKGSF*IQAICL
Trigger: TAGGCAGATTGCCTGGATCAAGAAACTGCCTTTCTT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGGAGCCACTCTGGGCCTaGGGCTTTGTGTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SWEASPVDQVIARTLPRWEPLWA*GFVSWV
Trigger: GACCCAGGACACAAAGCCCAAGGCCCAGAGTGGCTC...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTCAGCTTGCTCCAGACTaGGCAGGCTCTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: RSTGQAPARNTQPLCSEIQLAPD*AGSLEF
Trigger: GAACTCCAGAGAGCCTGCCAAGTCTGGAGCAAGCTG...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS TCA 90 bp GAATCCATTCAGTTCCACAGACCTGGAAGACAGTGTGGAGCCTGGTaGGGGCTGGTTGCTCTCCGAAGCCCTGTTCCCAGGGGAACTGTG +
Preference number: 5 (lower is better)
Translates to: ESIQFHRPGRQCGAW*GLVALRSPVPRGTV
Trigger: CACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGTCTGTGGAACTGAATGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS CCA 90 bp TTCAGTTCCACAGACCTGGAAGACAGTGTGGAGCCTGGTGAGGGCTaGTTGCTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGGTCACTA +
Preference number: 5 (lower is better)
Translates to: FSSTDLEDSVEPGEG*LLSEALFPGELWSL
Trigger: TAGTGACCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGTCTGTGGAACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS CCA 90 bp AGTTCCACAGACCTACTGGAAGACAGTGTGGAGCCTGGTGAGGGCTaGTTGCTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGGTCACTA +
Preference number: 5 (lower is better)
Translates to: SSTDLLEDSVEPGEG*LLSEALFPGELWSL
Trigger: TAGTGACCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGTAGGTCTGTGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000475178.1
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGCCGAGGGGAGGAGGTaGTCAGGAGCCCGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLAEGRR*SGAREL
Trigger: GAGCTCGCGGGCTCCTGACAACCTCCTCCCCTCGGC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp GCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAGCATGTGCATCATGTaGAAGGCCATACATTCAACT +
Preference number: 5 (lower is better)
Translates to: ACPAHPRRCGWPEEGAWNSMCIM*KAIHST
Trigger: AGTTGAATGTATGGCCTTCAACATGATGCACATGCT...GTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS TCA 90 bp ATGGGCGTGCCCAATGGTTCCAGGTCCTCGGCTGATAACAGCTGGTaGATCAGACTGTATGACTGGGGATCCAGGCTGCGAGCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: MGVPNGSRSSADNSW*IRLYDWGSRLRACW
Trigger: CCAACAAGCTCGCAGCCTGGATCCCCAGTCATACAGTCTGATTCACCAGCTGTTATCAGCCGAGGACCTGGAACCATTGGGCACGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS-3UTR CAA 90 bp CGAGGGAGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTCCTTTGAGCCTACAGTaGATTCCTGTGCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RGSWEASPVDQVIARTLPPLSLQ*IPVQAV
Trigger: CACAGCCTGCACAGGAATCAACTGTAGGCTCAAAGG...AGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCTCCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGGGGTCCGCGCCGGGTTaGTTGCTCCGCCATGACCGG +
Preference number: 5 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQGSAPG*LLRHDR
Trigger: CCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCC...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSPGEGW*LSEALF
Trigger: GAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGACCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRPGEGW*LSEALF
Trigger: GAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGG...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGTTGCCCACACTGGTCTaGCAGGAATGCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWLPTLV*QECSTT
Trigger: GGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCAA...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTGCCGAGGGGAGGAGGTaGTCAGGAGCCCGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSAEGRR*SGAREL
Trigger: GAGCTCGCGGGCTCCTGACAACCTCCTCCCCTCGGC...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTGCCGAGGGGAGGAGGTaGTCAGGAGCCCGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSAEGRR*SGAREL
Trigger: GAGCTCGCGGGCTCCTGACAACCTCCTCCCCTCGGC...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCCCATCTGGAGGCATTaGAGCAGGCGGCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSPIWRH*SRRQYW
Trigger: CCAGTACTGCCGCCTGCTCAAATGCCTCCAGATGGG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCCCATCTGGAGGCATTaGAGCAGGCGGCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASPIWRH*SRRQYW
Trigger: CCAGTACTGCCGCCTGCTCAAATGCCTCCAGATGGG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLPGEGW*LSEALF
Trigger: GAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGG...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACTCACCTCCTACCCTGTaGCCGTCTCACCAACCTTGC +
Preference number: 5 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDSPPTL*PSHQPC
Trigger: GCAAGGTTGGTGAGACGGCAACAGGGTAGGAGGTGA...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS TCA 90 bp CTGTTCCCAGGGGAACTGTGGTCACTATCACCATGGTTGCTCCAGTaGTTGGCCTCTTCCTCAAACTCCTGCCCAGACATGATCCTTTCG +
Preference number: 5 (lower is better)
Translates to: LFPGELWSLSPWLLQ*LASSSNSCPDMILS
Trigger: CGAAAGGATCATGTCTGGGCAGGAGTTTGAGGAAGAGGCCAATCACTGGAGCAACCATGGTGATAGTGACCACAGTTCCCCTGGGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS GCA 90 bp ATTGAGAGCTCGCAGAAGAAAGGCAGTTTCTTGATCCAGGCAATCTaGCTAAAGAGCAGCTCGTCGGCCAGGCGGCAAAGCAGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: IESSQKKGSFLIQAI*LKSSSSARRQSRAN
Trigger: ATTTGCCCTGCTTTGCCGCCTGGCCGACGAGCTGCTCTTTAGGCAGATTGCCTGGATCAAGAAACTGCCTTTCTTCTGCGAGCTCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp CGGTCCACAGGTCAGGCTCCGGCTCGGAACACACAGCCACTTTGCTCTGAGATTGACATGACACAGTTCTaGTCACGACTGCATCGATAT +
Preference number: 5 (lower is better)
Translates to: RSTGQAPARNTQPLCSEIDMTQF*SRLHRY
Trigger: ATATCGATGCAGTCGTGACAAGAACTGTGTCATGTC...AATCTCAGAGCAAAGTGGCTGTGTGTTCCGAGCCGGAGCCTGACCTGTGGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGATTGCCCACACTGGTCTaGCAGGAATGCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRLPTLV*QECSTT
Trigger: GGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCAA...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp CCTATGGCAGACCTGGGATGGCAACACAGACAAAAACACCAACACCCCAGGGCAGCCGTCTCACCAACCTaGCTTAGTGAATCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: PMADLGWQHRQKHQHPRAAVSPT*LSESPN
Trigger: GTTAGGAGATTCACTAAGCAAGGTTGGTGAGACGGC...TGCCCTGGGGTGTTGGTGTTTTTGTCTGTGTTGCCATCCCAGGTCTGCCATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCTGCCCACAGTGGGTTaGTCTGTCTCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASLPTVG*SVSISP
Trigger: GGGACTGATGGAGACAGACAAACCCACTGTGGGCAG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAGCTGGCGGGCAGCCCTaGGCCGGCCCTTTGGAGACA +
Preference number: 5 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIAGGQP*AGPLET
Trigger: TGTCTCCAAAGGGCCGGCCAAGGGCTGCCCGCCAGC...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCAAACAGGGCCCATCCCTaGCCAGCTGGCAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPNRAHP*PAGRVG
Trigger: TCCCACCCTGCCAGCTGGCAAGGGATGGGCCCTGTT...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS GCA 90 bp GTTCTGCCTGTGTCACAGCGTATCCATCTTCAATCAACATGGGCGTaGCCAATGGTTCCAGGTCCTCGGCTGATAACAGCTGGTGAATCA +
Preference number: 5 (lower is better)
Translates to: VLPVSQRIHLQSTWA*PMVPGPRLITAGES
Trigger: TGATTCACCAGCTGTTATCAGCCGAGGACCTGGAACCATTGGGCACGCCCATGTTGATTGAAGATGGATACGCTGTGACACAGGCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS GCA 90 bp CTGGTCTTGCAGGAATGCAGCACCACCTTAAAGAGGAGGGGCAGCTaGTCCAGGGGCACATTCACCATCTTTCCTGCAATATATCGAATC +
Preference number: 5 (lower is better)
Translates to: LVLQECSTTLKRRGS*SRGTFTIFPAIYRI
Trigger: GATTCGATATATTGCAGGAAAGATGGTGAATGTGCCCCTGGAGCAGCTGCCCCTCCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTCCGCGCCGGGTTTGTaGCTCCGCCATGACCGGCGC +
Preference number: 5 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCSAPGL*LRHDRR
Trigger: GCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGGA...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTTGCCCACACTGGTCTaGCAGGAATGCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLLPTLV*QECSTT
Trigger: GGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCAA...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTGGAACAGGTCATTCCTaGCCCACACTGGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSGTGHS*PTLVLQ
Trigger: CTGCAAGACCAGTGTGGGCAAGGAATGACCTGTTCC...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTCCCTTGGCCGGCCCTTaGGAGACAAGGGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSPLAGP*ETRAQG
Trigger: TCCCTGAGCCCTTGTCTCCAAAGGGCCGGCCAAGGG...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS TCA 90 bp GGTTGCTCCAGTGATTGGCCTCTTCCTCAAACTCCTGCCCAGACATaGTCCTTTCGATTTCTTCTTCCGATATCTGGACTGGCCCAATGC +
Preference number: 5 (lower is better)
Translates to: GCSSDWPLPQTPAQT*SFRFLLPISGLAQC
Trigger: GCATTGGGCCAGTCCAGATATCGGAAGAAGAAATCGAAAGGATCATGTCTGGGCAGGAGTTTGAGGAAGAGGCCAATCACTGGAGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS-3UTR CAA 90 bp CCACAGAAACCCTTAGGATTCCCCATTCCTTGCTCTGGTTCTGGGAAACAGGACTTGCAAATGCTCCGCTaGAAAAACCCTTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PQKPLGFPIPCSGSGKQDLQMLR*KNPLQP
Trigger: GGGCTGCAAAGGGTTTTTCAAGCGGAGCATTTGCAA...GTCCTGTTTCCCAGAACCAGAGCAAGGAATGGGGAATCCTAAGGGTTTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGCATCGATATACCCGTTaGTTGCAAATGCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWHRYTR*LQMLRL
Trigger: CAAGCGGAGCATTTGCAACAAACGGGTATATCGATG...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTGGAACAGGTCATTCCTaGCCCACACTGGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPGTGHS*PTLVLQ
Trigger: CTGCAAGACCAGTGTGGGCAAGGAATGACCTGTTCC...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGGAACAGGTCATTCCTaGCCCACACTGGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLGTGHS*PTLVLQ
Trigger: CTGCAAGACCAGTGTGGGCAAGGAATGACCTGTTCC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAGGACTGGTGCAGAAGACATTAAAGACGGTCCACAGGTCAGGCTCCGGCTCGAGAGAGCAATTTCTTTaGACACCCAACACAACGGGT +
Preference number: 5 (lower is better)
Translates to: KGLVQKTLKTVHRSGSGSREQFL*TPNTTG
Trigger: ACCCGTTGTGTTGGGTGTCAAAAGAAATTGCTCTCT...CGAGCCGGAGCCTGACCTGTGGACCGTCTTTAATGTCTTCTGCACCAGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AGCTGGGAGGCGAGTCCTGTGGATCAAGTGATTGCCAGGACTTTGCCTAGATGGTGGAGAGACATGTTCTaGCCTCATCAGAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: SWEASPVDQVIARTLPRWWRDMF*PHQRAI
Trigger: AATTGCTCTCTGATGAGGCAAGAACATGTCTCTCCA...CCATCTAGGCAAAGTCCTGGCAATCACTTGATCCACAGGACTCGCCTCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTGCCAGGTTGAGCGCTTaGAGACAGATTCTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSARLSA*RQILGN
Trigger: ATTCCCCAGAATCTGTCTCAAAGCGCTCAACCTGGC...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAGAAACAATTACAATCAGACATGGACTACCCAGTATGCACACGACGTGGTGCCCTATCCCTGGGGGCTaGCCCACCTCTCTTGTGAGT +
Preference number: 5 (lower is better)
Translates to: KETITIRHGLPSMHTTWCPIPGG*PTSLVS
Trigger: ACTCACAAGAGAGGTGGGCAAGCCCCCAGGGATAGG...GCACCACGTCGTGTGCATACTGGGTAGTCCATGTCTGATTGTAATTGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCACTCACCGCCTCCCTTaGAGCCTACAGTTGATTCCT +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASTHRLP*SLQLIP
Trigger: AGGAATCAACTGTAGGCTCAAAGGGAGGCGGTGAGT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTCCCATCTGGAGGCATTaGAGCAGGCGGCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSPIWRH*SRRQYW
Trigger: CCAGTACTGCCGCCTGCTCAAATGCCTCCAGATGGG...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAAGAAAGGCAGTTTCTaGATCCAGGCAATCTGCCTA +
Preference number: 5 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWKKGSF*IQAICL
Trigger: TAGGCAGATTGCCTGGATCAAGAAACTGCCTTTCTT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGTCGGAGGGCGAGTACTaGGCAGTGACATCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQSEGEY*AVTSAS
Trigger: ACTGGCTGATGTCACTGCCAAGTACTCGCCCTCCGA...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp ATATGGTCACTGTGCCCTACTCTCTTAATTTTCACGCTTTCCAAGGAAAGGACGTCGGAGGGCGAGTACTaGGCAGTGACATCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: IWSLCPTLLIFTLSKERTSEGEY*AVTSAS
Trigger: ACTGGCTGATGTCACTGCCAAGTACTCGCCCTCCGA...CGTCCTTTCCTTGGAAAGCGTGAAAATTAAGAGAGTAGGGCACAGTGACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGTTGCCCACACTGGTCTaGCAGGAATGCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQLPTLV*QECSTT
Trigger: GGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCAA...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCTCTCCTAACAACACTTaGCCCCCTTACAGTGTGCCG +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLSPNNT*PPYSVP
Trigger: CGGCACACTGTAAGGGGGCAAAGTGTTGTTAGGAGA...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCGTGATTGCCAGGACTTaGCCTAGATGGAAAGTTCGC +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASVIART*PRWKVR
Trigger: GCGAACTTTCCATCTAGGCAAAGTCCTGGCAATCAC...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTCTGGAGTTCCCGCCTaGGAGGAAACAGTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPSGVPA*EETVQV
Trigger: TACCTGAACTGTTTCCTCCAAGGCGGGAACTCCAGA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTTTGCAAATGCTCCGCTaGAAAAACCCTTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPLQMLR*KNPLQP
Trigger: GGGCTGCAAAGGGTTTTTCAAGCGGAGCATTTGCAA...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCATCGATATACCCGTTaGTTGCAAATGCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSHRYTR*LQMLRL
Trigger: CAAGCGGAGCATTTGCAACAAACGGGTATATCGATG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCCCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCPGEGW*LSEALF
Trigger: GAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGG...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp TTCACACTAATTGGTCACATTTCCACAGGTAGTCAATTCACAGAACAGGGCCCAGGAACAGGTCATTCCTaGCCCACACTGGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: FTLIGHISTGSQFTEQGPGTGHS*PTLVLQ
Trigger: CTGCAAGACCAGTGTGGGCAAGGAATGACCTGTTCC...TGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGAAACAAAAACTCTTCTaGCTATGGAGGCAACGGGAA +
Preference number: 5 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWKQKLF*LWRQRE
Trigger: TTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGGAGTGCTTTTGGTGGTaGGGGATCAGAGAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQECFWW*GIRERA
Trigger: TGCCCTCTCTCTGATCCCCAACCACCAAAAGCACTC...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GCTTTCAGAGTCGTATTTTTATGGCATAAAAATTCTCACTCGGCTGGGTGCAGTTTTGGTCATGGAGGGTaGATGGAGTCAGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AFRVVFLWHKNSHSAGCSFGHGG*MESGWR
Trigger: CCGCCAGCCTGACTCCATCAACCCTCCATGACCAAA...ACTGCACCCAGCCGAGTGAGAATTTTTATGCCATAAAAATACGACTCTGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTCGATATACCCGTTTGTaGCAAATGCTCCGCTTGAAA +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSRYTRL*QMLRLK
Trigger: TTTCAAGCGGAGCATTTGCAACAAACGGGTATATCG...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCCGATATACCCGTTTGTaGCAAATGCTCCGCTTGAAA +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASRYTRL*QMLRLK
Trigger: TTTCAAGCGGAGCATTTGCAACAAACGGGTATATCG...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCATCGATATACCCGTTaGTTGCAAATGCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPHRYTR*LQMLRL
Trigger: CAAGCGGAGCATTTGCAACAAACGGGTATATCGATG...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTAAGGTGCGGTATATATaGGTAATGTGGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: KTLLAMEATGNAAPQPPSKVRYI*VMWRHR
Trigger: TCTGTGCCTCCACATTACCAATATATACCGCACCTT...AGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAAGGTGCGGTATATATaGGTAATGTGGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASKVRYI*VMWRHR
Trigger: TCTGTGCCTCCACATTACCAATATATACCGCACCTT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATATCGGAGGGCGAGTACTaGGCAGTGACATCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAISEGEY*AVTSAS
Trigger: ACTGGCTGATGTCACTGCCAAGTACTCGCCCTCCGA...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp ACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCATCTTGGCTGTTCAATACTACGTaGTTGGAGAGACATGTTCTT +
Preference number: 5 (lower is better)
Translates to: TLLAMEATGNAAPQPPSWLFNTT*LERHVL
Trigger: AAGAACATGTCTCTCCAACAACGTAGTATTGAACAG...CCAAGATGGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GGACAGATAGAGGCCTCAGCAAAGAACGATGCTGTACACAGGAGCTGTCTTAGATTGTACAATGGCAACTaGCAGAACCTTTCCCCTACT +
Preference number: 5 (lower is better)
Translates to: GQIEASAKNDAVHRSCLRLYNGN*QNLSPT
Trigger: AGTAGGGGAAAGGTTCTGCAAGTTGCCATTGTACAA...TCTAAGACAGCTCCTGTGTACAGCATCGTTCTTTGCTGAGGCCTCTATCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCATCGATATACCCGTTaGTTGCAAATGCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSHRYTR*LQMLRL
Trigger: CAAGCGGAGCATTTGCAACAAACGGGTATATCGATG...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCGACATGACACAGTTCTaGTCACGACTGCATCGATAT +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLDMTQF*SRLHRY
Trigger: ATATCGATGCAGTCGTGACAAGAACTGTGTCATGTC...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCCAAACAAAAACTCTTCTaGCTATGGAGGCAACGGGAA +
Preference number: 5 (lower is better)
Translates to: NKNSSCYGGNGKCCSTASKQKLF*LWRQRE
Trigger: TTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT...GGAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCAATGAGACAGGTTCGTaGTTCAGCCCGATCATTAGT +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLNETGS*FSPIIS
Trigger: ACTAATGATCGGGCTGAACAACGAACCTGTCTCATT...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373584.7
ENST00000416460.6
CDS-3UTR CAA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAAGGGAGGATGATCAGTaGCAAAGGCAGAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAIREDDQ*QRQRGV
Trigger: CACTCCCCTCTGCCTTTGCAACTGATCATCCTCCCT...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTTTGCAAATGCTCCGCTaGAAAAACCCTTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSLQMLR*KNPLQP
Trigger: GGGCTGCAAAGGGTTTTTCAAGCGGAGCATTTGCAA...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCGACATGACACAGTTCTaGTCACGACTGCATCGATAT +
Preference number: 5 (lower is better)
Translates to: NKQKLFLLWRQREMLLHSDMTQF*SRLHRY
Trigger: ATATCGATGCAGTCGTGACAAGAACTGTGTCATGTC...GCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTCAAACAAAAACTCTTCTaGCTATGGAGGCAACGGGAA +
Preference number: 5 (lower is better)
Translates to: KQKLFLLWRQREMLLHSLKQKLF*LWRQRE
Trigger: TTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT...GAGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp CAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGCCTAGCATGTGCATCATGTaGAAGGCCATACATTCAACT +
Preference number: 5 (lower is better)
Translates to: QTKTLLAMEATGNAAPQPSMCIM*KAIHST
Trigger: AGTTGAATGTATGGCCTTCAACATGATGCACATGCT...AGGCTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACATTTTGCAGTCTGGCCTaGCCCTACTACCCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTFCSLA*PYYPLK
Trigger: CTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAA...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCTGCTCCACAGAAGAAAGGCAGTTTCTaGATCCAGGCAATCTGCCTA +
Preference number: 5 (lower is better)
Translates to: KQTKTLLAMEATGNAAPQKKGSF*IQAICL
Trigger: TAGGCAGATTGCCTGGATCAAGAAACTGCCTTTCTT...CTGTGGAGCAGCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCGAGTGTCTATTCTTTTaGCAGTCTGGCCTTGCCCTA +
Preference number: 5 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSECLFF*QSGLAL
Trigger: TAGGGCAAGGCCAGACTGCAAAAAGAATAGACACTC...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp TCCCCTCCAACCTTTCTCCGTGTCCTTCAAACCAAATTCACAAATACATCTAGTCCCATAACACAACTTTaGTTCTTGGGCTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SPPTFLRVLQTKFTNTSSPITQL*FLGLEQ
Trigger: CTGCTCCAAGCCCAAGAACAAAAGTTGTGTTATGGG...ACTAGATGTATTTGTGAATTTGGTTTGAAGGACACGGAGAAAGGTTGGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTCGATATACCCGTTTGTaGCAAATGCTCCGCTTGAAA +
Preference number: 5 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSRYTRL*QMLRLK
Trigger: TTTCAAGCGGAGCATTTGCAACAAACGGGTATATCG...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp CTTCTTTCCCGACAGAAACATGTAAACAGAGCAGGAGCTACAGTATTCTTTTCCCGATATACCCGTTTGTaGCAAATGCTCCGCTTGAAA +
Preference number: 5 (lower is better)
Translates to: LLSRQKHVNRAGATVFFSRYTRL*QMLRLK
Trigger: TTTCAAGCGGAGCATTTGCAACAAACGGGTATATCG...GGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTCGGGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp GCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATACATTCAACTCTAGCATGTGCATCATGTaGAAGGCCATACATTCAACT +
Preference number: 5 (lower is better)
Translates to: AAFTQKHVHHVEGHTFNSSMCIM*KAIHST
Trigger: AGTTGAATGTATGGCCTTCAACATGATGCACATGCT...AGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAATGCATTGGCTGCATTCACACAAAAGCATGTGCATCATGTTGAAGGCCATAAATGAGACAGGTTCGTaGTTCAGCCCGATCATTAGT +
Preference number: 5 (lower is better)
Translates to: KMHWLHSHKSMCIMLKAINETGS*FSPIIS
Trigger: ACTAATGATCGGGCTGAACAACGAACCTGTCTCATT...TATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373584.7
ENST00000416460.6
CDS TCA 90 bp TCACCATCTTTCCTGCAATATATCGAATCTCAGGTAAGCACATCATaGGATCAGGAAAGCGGTTCGGCTGATGTGTGTATTTATATTCAG +
Preference number: 5 (lower is better)
Translates to: SPSFLQYIESQVSTS*DQESGSADVCIYIQ
Trigger: CTGAATATAAATACACACATCAGCCGAACCGCTTTCCTGATCTCATGATGTGCTTACCTGAGATTCGATATATTGCAGGAAAGATGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCGACATGACACAGTTCTaGTCACGACTGCATCGATAT +
Preference number: 5 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCDMTQF*SRLHRY
Trigger: ATATCGATGCAGTCGTGACAAGAACTGTGTCATGTC...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AAAAACAGACAAACAAACAAAAACTCTTCTTGCTATGGAGGCAACGGGAAATGCAAGGTGCGGTATATATaGGTAATGTGGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: KNRQTNKNSSCYGGNGKCKVRYI*VMWRHR
Trigger: TCTGTGCCTCCACATTACCAATATATACCGCACCTT...GCATTTCCCGTTGCCTCCATAGCAAGAAGAGTTTTTGTTTGTTTGTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS-3UTR CAA 90 bp AGTGTCTATTCTTTTTGCAGTCTGGCCTTGCCCTACTACCCTTTGAAGAAAACATTTGTAAAACTGGATTaGTACAATGGCAACTTGCAG +
Preference number: 5 (lower is better)
Translates to: SVYSFCSLALPYYPLKKTFVKLD*YNGNLQ
Trigger: CTGCAAGTTGCCATTGTACAAATCCAGTTTTACAAA...TGTTTTCTTCAAAGGGTAGTAGGGCAAGGCCAGACTGCAAAAAGAATAGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS-3UTR CAA 90 bp AAGTATCGTGAACTTAGAAATAAACAGATACACACGAACACACAAGAATCTTCCCCACAAATTAACAACTaGCTCTGTTCAATACTACGT +
Preference number: 5 (lower is better)
Translates to: KYRELRNKQIHTNTQESSPQINN*LCSILR
Trigger: ACGTAGTATTGAACAGAGCAAGTTGTTAATTTGTGG...GGAAGATTCTTGTGTGTTCGTGTGTATCTGTTTATTTCTAAGTTCACGATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487099.7
CDS CCA 72 bp CCTCCGCTAGGCGGCGGTTCGTCCCGCTCCATGCGGTaGTGCCTAGGGTCCGCGCCGGGTTTGTTGCTCCGC +
Preference number: 6 (lower is better)
Translates to: PPLGGGSSRSMR*CLGSAPGLLLR
Trigger: GCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGACGAACCGCCGCCTAGCGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 90 bp TCGTCCCGCTCCATGCGGTGGTGCCTAGGGTCCGCGCCGGGTTTGTaGCTCCGCCATGACCGGCGCCCTAGTCGCCGTGGTCGTCGTCCG +
Preference number: 6 (lower is better)
Translates to: SSRSMRWCLGSAPGL*LRHDRRPSRRGRRP
Trigger: CGGACGACGACCACGGCGACTAGGGCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGACGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS GCA 72 bp CCGCTAGGCGGCGGTTCGTCCCGCTCCATGCGGTGGTaGCTAGGGTCCGCGCCGGGTTTGTTGCTCCGCCAT +
Preference number: 6 (lower is better)
Translates to: PLGGGSSRSMRW*LGSAPGLLLRH
Trigger: ATGGCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGACGAACCGCCGCCTAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 72 bp CGCTCCATGCGGTGGTGCCTAGGGTCCGCGCCGGGTTaGTTGCTCCGCCATGACCGGCGCCCTAGTCGCCGT +
Preference number: 6 (lower is better)
Translates to: RSMRWCLGSAPG*LLRHDRRPSRR
Trigger: ACGGCGACTAGGGCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 90 bp GGTTCGTCCCGCTCCATGCGGTGGTGCCTAGGGTCCGCGCCGGGTTaGTTGCTCCGCCATGACCGGCGCCCTAGTCGCCGTGGTCGTCGT +
Preference number: 6 (lower is better)
Translates to: GSSRSMRWCLGSAPG*LLRHDRRPSRRGRR
Trigger: ACGACGACCACGGCGACTAGGGCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGAGCGGGACGAACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 72 bp TCCATGCGGTGGTGCCTAGGGTCCGCGCCGGGTTTGTaGCTCCGCCATGACCGGCGCCCTAGTCGCCGTGGT +
Preference number: 6 (lower is better)
Translates to: SMRWCLGSAPGL*LRHDRRPSRRG
Trigger: ACCACGGCGACTAGGGCGCCGGTCATGGCGGAGCAACAAACCCGGCGCGGACCCTAGGCACCACCGCATGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS TCA 72 bp AGCCTGTCCTGCCCACCCAAGACGCTGTGGTTGGCCTaGGGAGGGCGCCTGGAACAGGTCATTCCTTGCCCA +
Preference number: 6 (lower is better)
Translates to: SLSCPPKTLWLA*GGRLEQVIPCP
Trigger: TGGGCAAGGAATGACCTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTCTTGGGTGGGCAGGACAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 72 bp GACCTGGAAGACAGTGTGGAGCCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGG +
Preference number: 6 (lower is better)
Translates to: DLEDSVEPGEGW*LSEALFPGELW
Trigger: CCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS TCA 72 bp CAGTTCCACAGACCTGGAAGACAGTGTGGAGCCTGGTaGGGGCTGGTTGCTCTCCGAAGCCCTGTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: QFHRPGRQCGAW*GLVALRSPVPR
Trigger: CCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGTCTGTGGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS CCA 72 bp GACCTACTGGAAGACAGTGTGGAGCCTGGTGAGGGCTaGTTGCTCTCCGAAGCCCTGTTCCCAGGGGAACTG +
Preference number: 6 (lower is better)
Translates to: DLLEDSVEPGEG*LLSEALFPGEL
Trigger: CAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGTAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000475178.1
ENST00000487099.7
CDS CAA 72 bp GTTGGCCTGAGGAGGGCGCCTGGAACAGGTCATTCCTaGCCCACACTGGTCTTGCAGGAATGCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: VGLRRAPGTGHS*PTLVLQECSTT
Trigger: GGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCAAGGAATGACCTGTTCCAGGCGCCCTCCTCAGGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 72 bp CTACTGGAAGACAGTGTGGAGCCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGG +
Preference number: 6 (lower is better)
Translates to: LLEDSVEPGEGW*LSEALFPGELW
Trigger: CCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000475178.1
ENST00000487099.7
CDS TCA 72 bp TTCCACAGACCTACTGGAAGACAGTGTGGAGCCTGGTaGGGGCTGGTTGCTCTCCGAAGCCCTGTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: FHRPTGRQCGAW*GLVALRSPVPR
Trigger: CCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGTAGGTCTGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000475178.1
ENST00000487099.7
CDS CAA 90 bp GACGCTGTGGTTGGCCTGAGGAGGGCGCCTGGAACAGGTCATTCCTaGCCCACACTGGTCTTGCAGGAATGCAGCACCACCTTAAAGAGG +
Preference number: 6 (lower is better)
Translates to: DAVVGLRRAPGTGHS*PTLVLQECSTTLKR
Trigger: CCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACCAGTGTGGGCAAGGAATGACCTGTTCCAGGCGCCCTCCTCAGGCCAACCACAGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 90 bp AGTTCCACAGACCTGGAAGACAGTGTGGAGCCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGGTCACTATCA +
Preference number: 6 (lower is better)
Translates to: SSTDLEDSVEPGEGW*LSEALFPGELWSLS
Trigger: TGATAGTGACCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGGTCTGTGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344523.8
ENST00000416460.6
CDS CAA 90 bp TCCACAGACCTACTGGAAGACAGTGTGGAGCCTGGTGAGGGCTGGTaGCTCTCCGAAGCCCTGTTCCCAGGGGAACTGTGGTCACTATCA +
Preference number: 6 (lower is better)
Translates to: STDLLEDSVEPGEGW*LSEALFPGELWSLS
Trigger: TGATAGTGACCACAGTTCCCCTGGGAACAGGGCTTCGGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCTTCCAGTAGGTCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373584.7
ENST00000475178.1
ENST00000487099.7
CDS GCA 72 bp GCTGGTGAATCAGACTGTATGACTGGGGATCCAGGCTaGGAGCTTGTTGGGGCAGAAGTGGTGAGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: AGESDCMTGDPG*ELVGAEVVSGQ
Trigger: CTGGCCACTCACCACTTCTGCCCCAACAAGCTCGCAGCCTGGATCCCCAGTCATACAGTCTGATTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS CAA 72 bp GCCTGTAGCGCGGTCCCCACAAATGAGACAGGTTCGTaGTTCAGCCCGATCATTAGTGCCTGGGTCAAGCTC +
Preference number: 6 (lower is better)
Translates to: ACSAVPTNETGS*FSPIISAWVKL
Trigger: GAGCTTGACCCAGGCACTAATGATCGGGCTGAACAACGAACCTGTCTCATTTGTGGGGACCGCGCTACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373584.7
ENST00000416460.6
CDS TCA 72 bp CCCAATGGTTCCAGGTCCTCGGCTGATAACAGCTGGTaGATCAGACTGTATGACTGGGGATCCAGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: PNGSRSSADNSW*IRLYDWGSRLR
Trigger: TCGCAGCCTGGATCCCCAGTCATACAGTCTGATTCACCAGCTGTTATCAGCCGAGGACCTGGAACCATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS GCA 72 bp TTGTTCAGCCCGATCATTAGTGCCTGGGTCAAGCTCTaGCAATTCATCCTGACAGAAACCGTTGCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: LFSPIISAWVKL*QFILTETVARR
Trigger: CCGCCGCGCAACGGTTTCTGTCAGGATGAATTGGCAGAGCTTGACCCAGGCACTAATGATCGGGCTGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373584.7
ENST00000416460.6
CDS GCA 72 bp TGTTCCCAGGGGAACTGTGGTCACTATCACCATGGTTaGTCCAGTGATTGGCCTCTTCCTCAAACTCCTGCC +
Preference number: 6 (lower is better)
Translates to: CSQGNCGHYHHG*SSDWPLPQTPA
Trigger: GGCAGGAGTTTGAGGAAGAGGCCAATCACTGGAGCAACCATGGTGATAGTGACCACAGTTCCCCTGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS GCA 72 bp CAGGAATGCAGCACCACCTTAAAGAGGAGGGGCAGCTaGTCCAGGGGCACATTCACCATCTTTCCTGCAATA +
Preference number: 6 (lower is better)
Translates to: QECSTTLKRRGS*SRGTFTIFPAI
Trigger: TATTGCAGGAAAGATGGTGAATGTGCCCCTGGAGCAGCTGCCCCTCCTCTTTAAGGTGGTGCTGCATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CCA 72 bp CTGCCTGTGTCACAGCGTATCCATCTTCAATCAACATaGGCGTGCCCAATGGTTCCAGGTCCTCGGCTGATA +
Preference number: 6 (lower is better)
Translates to: LPVSQRIHLQST*ACPMVPGPRLI
Trigger: TATCAGCCGAGGACCTGGAACCATTGGGCACGCCCATGTTGATTGAAGATGGATACGCTGTGACACAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS TCA 72 bp GGCAGTACTGGCACCTGTTCCTCTGCTTCCGAGACATaGCACAGTTCTTGTCACGACTGCATCGATATACCC +
Preference number: 6 (lower is better)
Translates to: GSTGTCSSASET*HSSCHDCIDIP
Trigger: GGGTATATCGATGCAGTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGAGGAACAGGTGCCAGTACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS TCA 72 bp GGGATCCAGGCTGCGAGCTTGTTGGGGCAGAAGTGGTaGGTGGCCAGAATAGCTAAAAAGGTGCGGTATATA +
Preference number: 6 (lower is better)
Translates to: GIQAASLLGQKW*VARIAKKVRYI
Trigger: TATATACCGCACCTTTTTAGCTATTCTGGCCACTCACCACTTCTGCCCCAACAAGCTCGCAGCCTGGATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS CAA 90 bp CAGTACTGGCACCTGTTCCTCTGCTTCCGAGACATGACACAGTTCTaGTCACGACTGCATCGATATACCCGTTTGTTGCAAATGCTCCGC +
Preference number: 6 (lower is better)
Translates to: QYWHLFLCFRDMTQF*SRLHRYTRLLQMLR
Trigger: GCGGAGCATTTGCAACAAACGGGTATATCGATGCAGTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGAGGAACAGGTGCCAGTACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS TCA 72 bp TGTGTAGTTCTTCATCGGAGGGCGAGTACTTGGCAGTaGCATCAGCCAGTTCCCCAAAGATCTGCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: CVVLHRRASTWQ*HQPVPQRSACC
Trigger: ACAGCAAGCAGATCTTTGGGGAACTGGCTGATGTCACTGCCAAGTACTCGCCCTCCGATGAAGAACTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS GCA 72 bp TTTCGATTTCTTCTTCCGATATCTGGACTGGCCCAATaGTCTTATTCCGGCCTCCAGGCATGCCATCTTCTC +
Preference number: 6 (lower is better)
Translates to: FRFLLPISGLAQ*SYSGLQACHLL
Trigger: GAGAAGATGGCATGCCTGGAGGCCGGAATAAGAGCATTGGGCCAGTCCAGATATCGGAAGAAGAAATCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS CAA 72 bp TCCTTGATTGAGAGCTCGCAGAAGAAAGGCAGTTTCTaGATCCAGGCAATCTGCCTAAAGAGCAGCTCGTCG +
Preference number: 6 (lower is better)
Translates to: SLIESSQKKGSF*IQAICLKSSSS
Trigger: CGACGAGCTGCTCTTTAGGCAGATTGCCTGGATCAAGAAACTGCCTTTCTTCTGCGAGCTCTCAATCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 72 bp CTAAATCTGTGTAGTTCTTCATCGGAGGGCGAGTACTaGGCAGTGACATCAGCCAGTTCCCCAAAGATCTGC +
Preference number: 6 (lower is better)
Translates to: LNLCSSSSEGEY*AVTSASSPKIC
Trigger: GCAGATCTTTGGGGAACTGGCTGATGTCACTGCCAAGTACTCGCCCTCCGATGAAGAACTACACAGATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7
CDS CAA 72 bp CACCTGTTCCTCTGCTTCCGAGACATGACACAGTTCTaGTCACGACTGCATCGATATACCCGTTTGTTGCAA +
Preference number: 6 (lower is better)
Translates to: HLFLCFRDMTQF*SRLHRYTRLLQ
Trigger: TTGCAACAAACGGGTATATCGATGCAGTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGAGGAACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS CAA 72 bp ACACAGTTCTTGTCACGACTGCATCGATATACCCGTTaGTTGCAAATGCTCCGCTTGAAAAACCCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: TQFLSRLHRYTR*LQMLRLKNPLQ
Trigger: CTGCAAAGGGTTTTTCAAGCGGAGCATTTGCAACAAACGGGTATATCGATGCAGTCGTGACAAGAACTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000475178.1
ENST00000487099.7
CDS TCA 72 bp TTCCTGCAATATATCGAATCTCAGGTAAGCACATCATaGGATCAGGAAAGCGGTTCGGCTGATGTGTGTATT +
Preference number: 6 (lower is better)
Translates to: FLQYIESQVSTS*DQESGSADVCI
Trigger: AATACACACATCAGCCGAACCGCTTTCCTGATCTCATGATGTGCTTACCTGAGATTCGATATATTGCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344523.8
ENST00000373584.7
ENST00000416460.6
ENST00000487099.7