RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR2C2 (Homo sapiens)

Ensembl gene IDs: ENSG00000177463

Ensembl transcript IDs: ENST00000323373.10, ENST00000393102.7, ENST00000406272.6, ENST00000413118.5, ENST00000413194.1, ENST00000425241.5, ENST00000435454.5, ENST00000437120.5, ENST00000439011.5, ENST00000475707.5, ENST00000478572.1, ENST00000495282.1, ENST00000617312.4

Found 655 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCTGTCCAATGTGGCACCACAGGGGCGTCTGTAGCTGGCCAGACTaGACCCCTGTGGAGCACATGTGGCGCCAGCCTGAGCCAGATCAG +
Preference number: 1 (lower is better)
Translates to: FCPMWHHRGVCSWPD*TPVEHMWRQPEPDQ
Trigger: CTGATCTGGCTCAGGCTGGCGCCACATGTGCTCCACAGGGGTGCAGTCTGGCCAGCTACAGACGCCCCTGTGGTGCCACATTGGACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp CCTTCCAGCAGGCCCCTGCTTCCCAGGTCTATGAGCAACTACTGCTaGGCCAGGCCCTGGCTCTCAAGGGCCGAGTCTCAGTTTAAGGCC +
Preference number: 1 (lower is better)
Translates to: PSSRPLLPRSMSNYC*ARPWLSRAESQFKA
Trigger: GGCCTTAAACTGAGACTCGGCCCTTGAGAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCATAGACCTGGGAAGCAGGGGCCTGCTGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp ATTCCTTCCAGCAGGCCCCTGCTTCCCAGGTCTATGAGCAACTACTaGTGGGCCAGGCCCTGGCTCTCAAGGGCCGAGTCTCAGTTTAAG +
Preference number: 1 (lower is better)
Translates to: IPSSRPLLPRSMSNY*WARPWLSRAESQFK
Trigger: CTTAAACTGAGACTCGGCCCTTGAGAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCATAGACCTGGGAAGCAGGGGCCTGCTGGAAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp CCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATaGGAAGGTCCAGACCCTGTGTACAAAAGACCCAAACCAACCCTG +
Preference number: 1 (lower is better)
Translates to: PRAGHTKCTLVGGTQ*EGPDPVYKRPKPTL
Trigger: CAGGGTTGGTTTGGGTCTTTTGTACACAGGGTCTGGACCTTCTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp CGCCTGTCTCTGGGCTACTCAACAGAGCTGAATAGCTGGGAAGGCTaGTGGCTCAACCCAACTGCCAAGTTCCTTCCAGGTAGGGCCATG +
Preference number: 1 (lower is better)
Translates to: RLSLGYSTELNSWEG*WLNPTAKFLPGRAM
Trigger: CATGGCCCTACCTGGAAGGAACTTGGCAGTTGGGTTGAGCCATCAGCCTTCCCAGCTATTCAGCTCTGTTGAGTAGCCCAGAGACAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp CCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGACCCAGGGCTaGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGAAGG +
Preference number: 1 (lower is better)
Translates to: PRNLYTHNAAEGTQG*TYEVHAGGRHTMRR
Trigger: CCTTCTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp GTGCCCCACATCTTGCTGACTGAGCACAGCGCAAGCCTGGGAAATTaGTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCT +
Preference number: 1 (lower is better)
Translates to: VPHILLTEHSASLGN*YHLWESGLTDTDRS
Trigger: AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCTCAGTCAGCAAGATGTGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp AGAAACACGAGCCCTTTTCAAGGGGGCATTTGGAGTGGAAAGCCCTaGGAAGGTAACGCTCACACTCCAAGGCCACACTCCTCCATCTGG +
Preference number: 1 (lower is better)
Translates to: RNTSPFQGGIWSGKP*EGNAHTPRPHSSIW
Trigger: CCAGATGGAGGAGTGTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCCCTTGAAAAGGGCTCGTGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp CTGGACTCCAATGAGATCAGGTCCCAGAACATGGATGTACACATGTaGCATGAACTGCTGATTGCGGCCAGGGGCTGGAAGCCCTGCAGA +
Preference number: 1 (lower is better)
Translates to: LDSNEIRSQNMDVHM*HELLIAARGWKPCR
Trigger: TCTGCAGGGCTTCCAGCCCCTGGCCGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTCATTGGAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp TCCTTATCCAGCCTGAGTCTAAGCAGCCTACTGGCTGCCACTGAATaGCCTGGGAATGAGAGGAGGGGCTGGTGGAGACCTTTTCACCAA +
Preference number: 1 (lower is better)
Translates to: SLSSLSLSSLLAATE*PGNERRGWWRPFHQ
Trigger: TTGGTGAAAAGGTCTCCACCAGCCCCTCCTCTCATTCCCAGGTCATTCAGTGGCAGCCAGTAGGCTGCTTAGACTCAGGCTGGATAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp AGGAGCAGCCAGGCCAGTAGAAGAGGGAGCATGAACGTGGCTCCATaGAGTTCAGTAGCCAGAGGACAGGTCTCACTTCATGAAACCCAA +
Preference number: 1 (lower is better)
Translates to: RSSQASRRGSMNVAP*SSVARGQVSLHETQ
Trigger: TTGGGTTTCATGAAGTGAGACCTGTCCTCTGGCTACTGAACTCCATGGAGCCACGTTCATGCTCCCTCTTCTACTGGCCTGGCTGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp TTGCTGACTGAGCACAGCGCAAGCCTGGGAAATTGCTACCATCTTTaGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATCTCTGACC +
Preference number: 1 (lower is better)
Translates to: LLTEHSASLGNCYHL*ESGLTDTDRSESLT
Trigger: GGTCAGAGATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCTCAGTCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp GAGGGGCTGGTGGAGACCTTTTCACCAACACCAAGAACTGGGATCTaGAAGCTGTTATGCTTGTATTCCCAGGGAACTGCAACATGGCCC +
Preference number: 1 (lower is better)
Translates to: EGLVETFSPTPRTGI*KLLCLYSQGTATWP
Trigger: GGGCCATGTTGCAGTTCCCTGGGAATACAAGCATAACAGCTTTCAGATCCCAGTTCTTGGTGTTGGTGAAAAGGTCTCCACCAGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp ACTTCATGGCCCTTCCCAGGCAGGCTCACCCAAAGGAAAATGGAGTaGAGAAAATCACCAGCAAATCTTCCCTGCCGAGGGACCTTGGAA +
Preference number: 1 (lower is better)
Translates to: TSWPFPGRLTQRKME*RKSPANLPCRGTLE
Trigger: TTCCAAGGTCCCTCGGCAGGGAAGATTTGCTGGTGATTTTCTTCACTCCATTTTCCTTTGGGTGAGCCTGCCTGGGAAGGGCCATGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp GAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGAGTGGAGATTCTaGCTTCATGGCCCTTCCCAGGCAGGCTCACCCAAAGGAAAATGG +
Preference number: 1 (lower is better)
Translates to: EPLLPGILPFAEWRF*LHGPSQAGSPKGKW
Trigger: CCATTTTCCTTTGGGTGAGCCTGCCTGGGAAGGGCCATGAAGTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp TCTGCTCTATGGCTAGAAGCTTCTGAACTGGGTCACCACCGACTGTaGTACCACACTCCCACTTACTGCATGATGCAAATGAGCCACGTT +
Preference number: 1 (lower is better)
Translates to: SALWLEASELGHHRL*YHTPTYCMMQMSHV
Trigger: AACGTGGCTCATTTGCATCATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGCTTCTAGCCATAGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp CCCAATTGTATTGGAAGTACTGTCAAGAGCTCAAAATGCCCACCTTaGACTTTTTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATG +
Preference number: 1 (lower is better)
Translates to: PNCIGSTVKSSKCPP*TFWSQGSICHERRM
Trigger: CATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGACAGTACTTCCAATACAATTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp TTTTTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTaGGGATGTTTTCACTTGCTGGAGGAACTGTACATCTCATTTGGC +
Preference number: 1 (lower is better)
Translates to: FLVTRLHLPRAADVT*GCFHLLEELYISFG
Trigger: GCCAAATGAGATGTACAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp TCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTaGATGATGCAAATGAGCCACGTTTCCATTCACAGAATTCAGCTC +
Preference number: 1 (lower is better)
Translates to: SELGHHRLCYHTPTY*MMQMSHVSIHRIQL
Trigger: GAGCTGAATTCTGTGAATGGAAACGTGGCTCATTTGCATCATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp ATGAGAGGAGGGGCTGGTGGAGACCTTTTCACCAACACCAAGAACTaGGATCTGAAAGCTGTTATGCTTGTATTCCCAGGGAACTGCAAC +
Preference number: 1 (lower is better)
Translates to: MRGGAGGDLFTNTKN*DLKAVMLVFPGNCN
Trigger: GTTGCAGTTCCCTGGGAATACAAGCATAACAGCTTTCAGATCCCAGTTCTTGGTGTTGGTGAAAAGGTCTCCACCAGCCCCTCCTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp ATCTCAGAAACCAACCAAGAGGTGTTCAAAGCCCAAAACAGTCCCTaGAATCAGCCATCACCAGCAAGGGGACTTAAAGAGCAGGACCAG +
Preference number: 1 (lower is better)
Translates to: ISETNQEVFKAQNSP*NQPSPARGLKEQDQ
Trigger: CTGGTCCTGCTCTTTAAGTCCCCTTGCTGGTGATGGCTGATTCCAGGGACTGTTTTGGGCTTTGAACACCTCTTGGTTGGTTTCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp AAGCTGTTATGCTTGTATTCCCAGGGAACTGCAACATGGCCCTCATaGTCACTCTCAAGGATCAAAACGACGGAAGGCAGGCAACAATCT +
Preference number: 1 (lower is better)
Translates to: KLLCLYSQGTATWPS*SLSRIKTTEGRQQS
Trigger: AGATTGTTGCCTGCCTTCCGTCGTTTTGATCCTTGAGAGTGACCATGAGGGCCATGTTGCAGTTCCCTGGGAATACAAGCATAACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp CGTGGCTCCATGGAGTTCAGTAGCCAGAGGACAGGTCTCACTTCATaGAACCCAAAGTTTCACAAACTGCTAATAAGGGCTATAAGCCCT +
Preference number: 1 (lower is better)
Translates to: RGSMEFSSQRTGLTS*NPKFHKLLIRAISP
Trigger: AGGGCTTATAGCCCTTATTAGCAGTTTGTGAAACTTTGGGTTTCATGAAGTGAGACCTGTCCTCTGGCTACTGAACTCCATGGAGCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp GGAATTACTATTTATTCAGTCATAGGACAGTGCCCCACATCTTGCTaGCTGAGCACAGCGCAAGCCTGGGAAATTGCTACCATCTTTGGG +
Preference number: 1 (lower is better)
Translates to: GITIYSVIGQCPTSC*LSTAQAWEIATIFG
Trigger: CCCAAAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCTCAGTCAGCAAGATGTGGGGCACTGTCCTATGACTGAATAAATAGTAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp AAGAACTGGGATCTGAAAGCTGTTATGCTTGTATTCCCAGGGAACTaGAACATGGCCCTCATGGTCACTCTCAAGGATCAAAACGACGGA +
Preference number: 1 (lower is better)
Translates to: KNWDLKAVMLVFPGN*NMALMVTLKDQNDG
Trigger: TCCGTCGTTTTGATCCTTGAGAGTGACCATGAGGGCCATGTTGCAGTTCCCTGGGAATACAAGCATAACAGCTTTCAGATCCCAGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp CTAGAGAATATACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTaGAATTCTTCCTTTTGCAGAGTGGAGATTCTGACTTCATGGCCC +
Preference number: 1 (lower is better)
Translates to: LENIRKCHPVRTSSA*NSSFCRVEILTSWP
Trigger: GGGCCATGAAGTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGTATATTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp GTTACCTATGACCCCATTGCACATAAAGTCATTTACACTGGAAAGTaGGCAACAAGCTTCTGGACTCCAATGAGATCAGGTCCCAGAACA +
Preference number: 1 (lower is better)
Translates to: VTYDPIAHKVIYTGK*ATSFWTPMRSGPRT
Trigger: TGTTCTGGGACCTGATCTCATTGGAGTCCAGAAGCTTGTTGCCCACTTTCCAGTGTAAATGACTTTATGTGCAATGGGGTCATAGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp GAACCTAGAGAATATACGGAAATGTCACCCTGTCAGAACCTCTTCTaGCTGGAATTCTTCCTTTTGCAGAGTGGAGATTCTGACTTCATG +
Preference number: 1 (lower is better)
Translates to: EPREYTEMSPCQNLF*LEFFLLQSGDSDFM
Trigger: CATGAAGTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGTATATTCTCTAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp GGAAATATTTGCACATACCAAAATACCACTACTTTTCTTTGTATGTaGACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGG +
Preference number: 1 (lower is better)
Translates to: GNICTYQNTTTFLCM*TVLEGFCCSLAGVW
Trigger: CCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTAGTGGTATTTTGGTATGTGCAAATATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
3UTR TCA 90 bp TTAACCAACCTGACAGGAGATGAAATGGACCTGCAGTCAGAGGCTTaGAATGAGTTAAAGCAGCAAGAATACAGGTTACGTGGACATGAT +
Preference number: 1 (lower is better)
Translates to: LTNLTGDEMDLQSEA*NELKQQEYRLRGHD
Trigger: ATCATGTCCACGTAACCTGTATTCTTGCTGCTTTAACTCATTTCAAGCCTCTGACTGCAGGTCCATTTCATCTCCTGTCAGGTTGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp CAAGTTTCCAATTGCATTTTAACTAGAAAGCCACTTTCAATAGCGTaGTTGTCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTG +
Preference number: 1 (lower is better)
Translates to: QVSNCILTRKPLSIA*LSRQAMTGKGRTIL
Trigger: CAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGACAATCACGCTATTGAAAGTGGCTTTCTAGTTAAAATGCAATTGGAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp TTGACCGGGTCTTCCACATGCCACTGTTCTCAAACAGGAAAAGCTTaGTATATATTCACATCCGTGGGAATTTACGGGTGTTTGAAGTTA +
Preference number: 1 (lower is better)
Translates to: LTGSSTCHCSQTGKA*YIFTSVGIYGCLKL
Trigger: TAACTTCAAACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGAACAGTGGCATGTGGAAGACCCGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp ATTGCACATAAAGTCATTTACACTGGAAAGTGGGCAACAAGCTTCTaGACTCCAATGAGATCAGGTCCCAGAACATGGATGTACACATGT +
Preference number: 1 (lower is better)
Translates to: IAHKVIYTGKWATSF*TPMRSGPRTWMYTC
Trigger: ACATGTGTACATCCATGTTCTGGGACCTGATCTCATTGGAGTCCAGAAGCTTGTTGCCCACTTTCCAGTGTAAATGACTTTATGTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp TCCCACTTAGTTTTGGATATTAAGATAAACTGTCTTCCAGCTTCCTaGCTCTTGTCCGAACCTAGAGAATATACGGAAATGTCACCCTGT +
Preference number: 1 (lower is better)
Translates to: SHLVLDIKINCLPAS*LLSEPREYTEMSPC
Trigger: ACAGGGTGACATTTCCGTATATTCTCTAGGTTCGGACAAGAGCCAGGAAGCTGGAAGACAGTTTATCTTAATATCCAAAACTAAGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp AATATAAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATaGCAAGGGTTAGACAATAAATGTAACTCCTCAGGACACAGAAAT +
Preference number: 1 (lower is better)
Translates to: NIKPRTAKEPQTTAL*QGLDNKCNSSGHRN
Trigger: ATTTCTGTGTCCTGAGGAGTTACATTTATTGTCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 90 bp AGACATAACTTCCTTTTAAGCGCATACTGTTCTTGCTGTAAACTCTaGTTGCTACAATTTATGAGGAGAAAGACTATCACCCTGGAAATT +
Preference number: 1 (lower is better)
Translates to: RHNFLLSAYCSCCKL*LLQFMRRKTITLEI
Trigger: AATTTCCAGGGTGATAGTCTTTCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGAACAGTATGCGCTTAAAAGGAAGTTATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 90 bp TCCACATTCAATACTGACAATGACAAGCTAAAAATCAGTCCCTCTTaGGGGCAATTACACATCTTAGAAGTGACTACACCTGAAATTAAA +
Preference number: 1 (lower is better)
Translates to: STFNTDNDKLKISPS*GQLHILEVTTPEIK
Trigger: TTTAATTTCAGGTGTAGTCACTTCTAAGATGTGTAATTGCCCTCAAGAGGGACTGATTTTTAGCTTGTCATTGTCAGTATTGAATGTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 90 bp GTGTTTGAAGTTAGACATAACTTCCTTTTAAGCGCATACTGTTCTTaGTGTAAACTCTGGTTGCTACAATTTATGAGGAGAAAGACTATC +
Preference number: 1 (lower is better)
Translates to: VFEVRHNFLLSAYCS*CKLWLLQFMRRKTI
Trigger: GATAGTCTTTCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGAACAGTATGCGCTTAAAAGGAAGTTATGTCTAACTTCAAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGGCAGAGGGCGGGCTGTaGGCAAGAGTGCTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEAEGGL*ARVLCR
Trigger: CCTGCAGAGCACTCTTGCTCACAGCCCGCCCTCTGC...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGGATAAAGGAAGCACGTaGGGCATCTGCTCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEDKGST*GICSAG
Trigger: GCCAGCAGAGCAGATGCCCCACGTGCTTCCTTTATC...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACCACGAGCGGCGGATGTaGCTTGGGGATGTTTTCACT +
Preference number: 2 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHHERRM*LGDVFT
Trigger: AGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTG...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTCCGGGGTGGTCGGCTaGCACACACCTGGGGGAACC +
Preference number: 2 (lower is better)
Translates to: EIRSQNMDVHMWHELLIASGVVG*HTPGGT
Trigger: GGTTCCCCCAGGTGTGTGCCAGCCGACCACCCCGGA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTTGCTTCCCAGGTCTATaGGCAACTACTGCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: SRQAMTGKGRTILWDEASCFPGL*ATTAGP
Trigger: TGGCCCAGCAGTAGTTGCTCATAGACCTGGGAAGCA...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTAGCCTGCATTTAAAATaGTCCGGGGTGGTCGGCTGG +
Preference number: 2 (lower is better)
Translates to: SRQAMTGKGRTILWDEASSLHLK*SGVVGW
Trigger: CCAGCCGACCACCCCGGAGCATTTTAAATGCAGGCT...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp GTCGGCTGGCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAATGGCTAGAAGCTTCTaGACTGGGTCACCACCGACT +
Preference number: 2 (lower is better)
Translates to: VGWHTPGGTKVHSVLVTLMARSF*TGSPPT
Trigger: AGTCGGTGGTGACCCAGTTCAGAAGCTTCTAGCCAT...TAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTGGTTCTAGAGGAGTCTaGAGATGCCCATCAGAGACC +
Preference number: 2 (lower is better)
Translates to: SRQAMTGKGRTILWDEASGSRGV*RCPSET
Trigger: GGTCTCTGATGGGCATCTGCAGACTCCTCTAGAACC...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGCAGACTGCACCCCTGTaGAGCACATGTGGCGCCAGC +
Preference number: 2 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQQTAPL*STCGAS
Trigger: GCTGGCGCCACATGTGCTCCACAGGGGTGCAGTCTG...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATGGGCATCTGCTCTGCTaGCTCAGGCATTCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: EIATIFGSQASLTQTVLNGHLLC*LRHSQG
Trigger: GCCCTGGGAATGCCTGAGCCAGCAGAGCAGATGCCC...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp CGTAAAGTGCTGCTAACCCTTCAGGATCAAGCATCCTGTTCTGCCTaGAGCCTGCAGCAGCTTCCATTCTGTCCAATGTGGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: RKVLLTLQDQASCSA*SLQQLPFCPMWHHR
Trigger: CCTGTGGTGCCACATTGGACAGAATGGAAGCTGCTGCAGGCTCAAGGCAGAACAGGATGCTTGATCCTGAAGGGTTAGCAGCACTTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTAGTAGTCAGGGAACCTaGCAAGTGTCTGCTCTATGG +
Preference number: 2 (lower is better)
Translates to: SRQAMTGKGRTILWDEASSSQGT*QVSALW
Trigger: CCATAGAGCAGACACTTGTCAGGTTCCCTGACTACT...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGGTTTTCCATTTGCCCTaGCCACAGGCAAGATGTTGC +
Preference number: 2 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMVFHLP*PQARCC
Trigger: GCAACATCTTGCCTGTGGGCAGGGCAAATGGAAAAC...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACCAAGTGTCTGCTCTATaGCTAGAAGCTTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHQVSAL*LEASEL
Trigger: CAGTTCAGAAGCTTCTAGCCATAGAGCAGACACTTG...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp GTCGGCTGGCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTACCACCTTGCACTTTTTaGTCACAAGGCTCCATCTGC +
Preference number: 2 (lower is better)
Translates to: VGWHTPGGTKVHSVLVTLPPCTF*SQGSIC
Trigger: GCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGG...TAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATAGATCAGAGCACCTGTaGGTCAGGGGAGTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: EIATIFGSQASLTQTVLNRSEHL*VRGVSR
Trigger: CCTGGACACTCCCCTGACTCACAGGTGCTCTGATCT...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGTGTAGCTGGCCAGACTaGACCCCTGTGGAGCACATG +
Preference number: 2 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQCSWPD*TPVEHM
Trigger: CATGTGCTCCACAGGGGTGCAGTCTGGCCAGCTACA...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp TATTGGAAGTACTGTCAAGAGCTCAAAATGCCCACCTTGCACTTTTaGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGG +
Preference number: 2 (lower is better)
Translates to: YWKYCQELKMPTLHF*VTRLHLPRAADVTW
Trigger: CCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGACAGTACTTCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp GAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTaGCAGAGTGGAGATTCTGACTTCATGGCCCTTCCCAGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: EMSPCQNLFCLEFFL*QSGDSDFMALPRQA
Trigger: AGCCTGCCTGGGAAGGGCCATGAAGTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACCAACTCCACAACATGTaGACACAATTAGGAATGATG +
Preference number: 2 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHQLHNM*TQLGMM
Trigger: CATCATTCCTAATTGTGTGCACATGTTGTGGAGTTG...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTGGGGATGTTTTCACTTaGTGGAGGAACTGTACATCT +
Preference number: 2 (lower is better)
Translates to: PAPIQPHSYDGAAETRALGDVFT*WRNCTS
Trigger: AGATGTACAGTTCCTCCAGCAAGTGAAAACATCCCC...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTCAAGCATCCTGTTCTaGCTTGAGCCTGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: EIRSQNMDVHMWHELLIASSILF*LEPAAA
Trigger: AGCTGCTGCAGGCTCAAGGCAGAACAGGATGCTTGA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAGGTCACCACCGACTGTaGTACCACACTCCCACTTAC +
Preference number: 2 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRGHHRL*YHTPTY
Trigger: GTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACC...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGCGGCTGGCACACACCTaGGGGAACCAAAGTGCACAG +
Preference number: 2 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVRLAHT*GNQSAQ
Trigger: CTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCG...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGCCAGCCTCACAGTTATaGTGGAGCTGCAGAAACACG +
Preference number: 2 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGPASQL*WSCRNT
Trigger: CGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGG...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTCACACTCCCACTTACTaGATGATGCAAATGAGCCAC +
Preference number: 2 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLHTPTY*MMQMSH
Trigger: GTGGCTCATTTGCATCATGCAGTAAGTGGGAGTGTG...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGGGCTGGTGTCCTAACTaGCTCAGAAGAGTCCACATT +
Preference number: 2 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQGWCPN*LRRVHI
Trigger: AATGTGGACTCTTCTGAGGCAGTTAGGACACCAGCC...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGAATGAGAGGAGGGGCTaGTGGAGACCTTTTCACCAA +
Preference number: 2 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQNERRG*WRPFHQ
Trigger: TTGGTGAAAAGGTCTCCACCAGCCCCTCCTCTCATT...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATAAAAGACAAAGCAATTaGCCGGGTCTTCCACATGCC +
Preference number: 2 (lower is better)
Translates to: EIATIFGSQASLTQTVLNKRQSN*PGLPHA
Trigger: GGCATGTGGAAGACCCGGTCAATTGCTTTGTCTTTT...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGATCTGTCCCACCTCTCTaGGCCAGCTGCCTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: CPQRTMKVKALETARVLRSVPPL*ASCLSS
Trigger: TGAGGAGAGGCAGCTGGCTCAGAGAGGTGGGACAGA...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGAACCTGACAAGTGTCTaGTCTATGGCTAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: EIRSQNMDVHMWHELLIANLTSV*SMARSF
Trigger: GAAGCTTCTAGCCATAGAGCAGACACTTGTCAGGTT...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGACCTGTGGAGCACATGTaGCGCCAGCCTGAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: CPQRTMKVKALETARVLRPVEHM*RQPEPD
Trigger: ATCTGGCTCAGGCTGGCGCCACATGTGCTCCACAGG...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGATGAACGTGGCTCCATaGAGTTCAGTAGCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGMNVAP*SSVARG
Trigger: TCCTCTGGCTACTGAACTCCATGGAGCCACGTTCAT...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATTCCCTGGGAGAAAAGTaGCTGTCAGATGATGAGACT +
Preference number: 2 (lower is better)
Translates to: EIATIFGSQASLTQTVLNSLGEK*LSDDET
Trigger: AGTCTCATCATCTGACAGCCACTTTTCTCCCAGGGA...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp GATGGGAATTACTATTTATTCAGTCATAGGACAGTGCCCCACATCTaGCTGACTGAGCACAGCGCAAGCCTGGGAAATTGCTACCATCTT +
Preference number: 2 (lower is better)
Translates to: DGNYYLFSHRTVPHI*LTEHSASLGNCYHL
Trigger: AAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCTCAGTCAGCAAGATGTGGGGCACTGTCCTATGACTGAATAAATAGTAATTCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTTTGGCAGTTAATGTCTaGCTAGTTGCAATCCAATTC +
Preference number: 2 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSLAVNV*LVAIQF
Trigger: GAATTGGATTGCAACTAGTCAGACATTAACTGCCAA...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATAGGAAGAAATTGTCCTaGAACCTTCCATCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: EIATIFGSQASLTQTVLNRKKLS*NLPSSF
Trigger: AAAGCTGGATGGAAGGTTTCAGGACAATTTCTTCCT...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGCCAAGAACTGGGATCTaGAAGCTGTTATGCTTGTAT +
Preference number: 2 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQPRTGI*KLLCLY
Trigger: ATACAAGCATAACAGCTTTCAGATCCCAGTTCTTGG...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTCAAAGGAAAATGGAGTaGAGAAAATCACCAGCAAAT +
Preference number: 2 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSQRKME*RKSPAN
Trigger: ATTTGCTGGTGATTTTCTTCACTCCATTTTCCTTTG...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGATTGTTCCAAAATCTaGTGCTTCATCAAAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSDCSKI*CFIKRH
Trigger: ATGCCTTTTGATGAAGCAGCAGATTTTGGAACAATC...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTGCGGCGGATGTGACTTaGGGATGTTTTCACTTGCTG +
Preference number: 2 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCAADVT*GCFHLL
Trigger: CAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGC...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATATTTACACTGGAAAGTaGGCAACAAGCTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: EIATIFGSQASLTQTVLNIYTGK*ATSFWT
Trigger: AGTCCAGAAGCTTGTTGCCCACTTTCCAGTGTAAAT...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp TTAGAAGTTGGAAACACTGTTCCCACTTACCCTACTAACACTGACTaGCGTAAAGTGCTGCTAACCCTTCAGGATCAAGCATCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: LEVGNTVPTYPTNTD*RKVLLTLQDQASCS
Trigger: AGAACAGGATGCTTGATCCTGAAGGGTTAGCAGCACTTTACGCAAGTCAGTGTTAGTAGGGTAAGTGGGAACAGTGTTTCCAACTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAGGTTGCTACAATTTATaGGGAGAAAGACTATCACCC +
Preference number: 2 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRGCYNL*GERLSP
Trigger: GGGTGATAGTCTTTCTCCTCATAAATTGTAGCAACC...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR TCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGGTCAGAGGCTTGAAATaGGTTAAAGCAGCAAGAATA +
Preference number: 2 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQVRGLK*VKAARI
Trigger: TATTCTTGCTGCTTTAACTCATTTCAAGCCTCTGAC...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAGTATTCCCAGGGAACTaGAACATGGCCCTCATGGTC +
Preference number: 2 (lower is better)
Translates to: CPQRTMKVKALETARVLRVFPGN*NMALMV
Trigger: GACCATGAGGGCCATGTTGCAGTTCCCTGGGAATAC...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTCAAGAATTTAGAAGTTaGAAACACTGTTCCCACTTA +
Preference number: 2 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSQEFRS*KHCSHL
Trigger: TAAGTGGGAACAGTGTTTCCAACTTCTAAATTCTTG...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp ACAAGTAAGACAGCTAATAAGTATGTGTGTAGCGTGGATATTGCCTaGAGATTAAGGAGCCTAACGCATCCACTGTTAACACCATGGCTG +
Preference number: 2 (lower is better)
Translates to: TSKTANKYVCSVDIA*RLRSLTHPLLTPWL
Trigger: CAGCCATGGTGTTAACAGTGGATGCGTTAGGCTCCTTAATCTCAAGGCAATATCCACGCTACACACATACTTATTAGCTGTCTTACTTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACTGGAGTGGAAAGCCCTaGGAAGGTAACGCTCACACT +
Preference number: 2 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYWSGKP*EGNAHT
Trigger: AGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCA...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTGTCAAGAGCTCAAAATaGCCACCTTGCACTTTTTGG +
Preference number: 2 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCVKSSK*PPCTFW
Trigger: CCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGAC...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGCTACTCTCCAAAATTTaGTGCCAAGGCAAGAATTAT +
Preference number: 2 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGLLSKI*CQGKNY
Trigger: ATAATTCTTGCCTTGGCAGCAAATTTTGGAGAGTAG...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTCACCCCCAATTGTATTaGAAGTACTGTCAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCHPQLY*KYCQEL
Trigger: GAGCTCTTGACAGTACTTCCAATACAATTGGGGGTG...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp TTAGTTTTGGATATTAAGATAAACTGTCTTCCAGCTTCCTGGCTCTaGTCCGAACCTAGAGAATATACGGAAATGTCACCCTGTCAGAAC +
Preference number: 2 (lower is better)
Translates to: LVLDIKINCLPASWL*SEPREYTEMSPCQN
Trigger: GTTCTGACAGGGTGACATTTCCGTATATTCTCTAGGTTCGGACAAGAGCCAGGAAGCTGGAAGACAGTTTATCTTAATATCCAAAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAGAGATGAAATGGACCTaGAGTCAGAGGCTTGAAATG +
Preference number: 2 (lower is better)
Translates to: CPQRTMKVKALETARVLREMKWT*SQRLEM
Trigger: CATTTCAAGCCTCTGACTGCAGGTCCATTTCATCTC...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp AACATATGGAAATATTTGCACATACCAAAATACCACTACTTTTCTTaGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: NIWKYLHIPKYHYFS*YVNGPGRILLLLGR
Trigger: CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTAGTGGTATTTTGGTATGTGCAAATATTTCCATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
3UTR CAA 90 bp AAAGACATACACAGTTTTCCATTTGCCCTGCCCACAGGCAAGATGTaGCTAACGTTACACATTGATAAGTGCTTAGAAAGTGCTAATATT +
Preference number: 2 (lower is better)
Translates to: KDIHSFPFALPTGKM*LTLHIDKCLESANI
Trigger: AATATTAGCACTTTCTAAGCACTTATCAATGTGTAACGTTAGCAACATCTTGCCTGTGGGCAGGGCAAATGGAAAACTGTGTATGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 90 bp CATAACTTCCTTTTAAGCGCATACTGTTCTTGCTGTAAACTCTGGTaGCTACAATTTATGAGGAGAAAGACTATCACCCTGGAAATTGAG +
Preference number: 2 (lower is better)
Translates to: HNFLLSAYCSCCKLW*LQFMRRKTITLEIE
Trigger: CTCAATTTCCAGGGTGATAGTCTTTCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGAACAGTATGCGCTTAAAAGGAAGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR GCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACCTCTCCAAAATTTGCTaGCAAGGCAAGAATTATAAA +
Preference number: 2 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYLSKIC*QGKNYK
Trigger: TTTATAATTCTTGCCTTGGCAGCAAATTTTGGAGAG...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp ATGTGGCACCACAGGGGCGTCTGTAGCTGGCCAGACTaGACCCCTGTGGAGCACATGTGGCGCCAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: MWHHRGVCSWPD*TPVEHMWRQPE
Trigger: CTCAGGCTGGCGCCACATGTGCTCCACAGGGGTGCAGTCTGGCCAGCTACAGACGCCCCTGTGGTGCCACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp CATGAACTGCTGATTGCGGCCAGGGGCTGGAAGCCCTaGAGAGGGCGGGCTGTGAGCAAGAGTGCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: HELLIAARGWKP*RGRAVSKSALQ
Trigger: CTGCAGAGCACTCTTGCTCACAGCCCGCCCTCTGCAGGGCTTCCAGCCCCTGGCCGCAATCAGCAGTTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp AGCAGGCCCCTGCTTCCCAGGTCTATGAGCAACTACTaGTGGGCCAGGCCCTGGCTCTCAAGGGCCGAGTCT +
Preference number: 3 (lower is better)
Translates to: SRPLLPRSMSNY*WARPWLSRAES
Trigger: AGACTCGGCCCTTGAGAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCATAGACCTGGGAAGCAGGGGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp AGGCCCCTGCTTCCCAGGTCTATGAGCAACTACTGCTaGGCCAGGCCCTGGCTCTCAAGGGCCGAGTCTCAG +
Preference number: 3 (lower is better)
Translates to: RPLLPRSMSNYC*ARPWLSRAESQ
Trigger: CTGAGACTCGGCCCTTGAGAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCATAGACCTGGGAAGCAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp TGTAGCTGGCCAGACTGCACCCCTGTGGAGCACATGTaGCGCCAGCCTGAGCCAGATCAGAGCACCTGTGAG +
Preference number: 3 (lower is better)
Translates to: CSWPDCTPVEHM*RQPEPDQSTCE
Trigger: CTCACAGGTGCTCTGATCTGGCTCAGGCTGGCGCCACATGTGCTCCACAGGGGTGCAGTCTGGCCAGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTaGGAGGCACACAATGAGAAGGTCCAGACCCTGTGT +
Preference number: 3 (lower is better)
Translates to: RDPGLDIRSARW*EAHNEKVQTLC
Trigger: ACACAGGGTCTGGACCTTCTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp CTGTACACGCACAATGCTGCTGAAGGGACCCAGGGCTaGACATACGAAGTGCACGCTGGTGGGAGGCACACA +
Preference number: 3 (lower is better)
Translates to: LYTHNAAEGTQG*TYEVHAGGRHT
Trigger: TGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCTTCAGCAGCATTGTGCGTGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp CCCAGGTCTATGAGCAACTACTGCTGGGCCAGGCCCTaGCTCTCAAGGGCCGAGTCTCAGTTTAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: PRSMSNYCWARP*LSRAESQFKAR
Trigger: TCTGGCCTTAAACTGAGACTCGGCCCTTGAGAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCATAGACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp GACCGTGACGCCTGTCTCTGGGCTACTCAACAGAGCTaGATAGCTGGGAAGGCTGATGGCTCAACCCAACTG +
Preference number: 3 (lower is better)
Translates to: DRDACLWATQQS*IAGKADGSTQL
Trigger: CAGTTGGGTTGAGCCATCAGCCTTCCCAGCTATTCAGCTCTGTTGAGTAGCCCAGAGACAGGCGTCACGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp AGCCCTTTTCAAGGGGGCATTTGGAGTGGAAAGCCCTaGGAAGGTAACGCTCACACTCCAAGGCCACACTCC +
Preference number: 3 (lower is better)
Translates to: SPFQGGIWSGKP*EGNAHTPRPHS
Trigger: GGAGTGTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCCCTTGAAAAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp TGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTaGCTTGGGGATGTTTTCACTTGCTGGAGGAACTGT +
Preference number: 3 (lower is better)
Translates to: WSQGSICHERRM*LGDVFTCWRNC
Trigger: ACAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp ACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTaGGGATGTTTTCACTTGCTGGAGGAACTGTACATC +
Preference number: 3 (lower is better)
Translates to: TRLHLPRAADVT*GCFHLLEELYI
Trigger: GATGTACAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp ACTGTCAAGAGCTCAAAATGCCCACCTTGCACTTTTTaGTCACAAGGCTCCATCTGCCACGAGCGGCGGATG +
Preference number: 3 (lower is better)
Translates to: TVKSSKCPPCTF*SQGSICHERRM
Trigger: CATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp AGCTGCAGAAACACGAGCCCTTTTCAAGGGGGCATTTaGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACT +
Preference number: 3 (lower is better)
Translates to: SCRNTSPFQGGI*SGKPWEGNAHT
Trigger: AGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCCCTTGAAAAGGGCTCGTGTTTCTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp CAGGCCAGTAGAAGAGGGAGCATGAACGTGGCTCCATaGAGTTCAGTAGCCAGAGGACAGGTCTCACTTCAT +
Preference number: 3 (lower is better)
Translates to: QASRRGSMNVAP*SSVARGQVSLH
Trigger: ATGAAGTGAGACCTGTCCTCTGGCTACTGAACTCCATGGAGCCACGTTCATGCTCCCTCTTCTACTGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp GAGCACAGCGCAAGCCTGGGAAATTGCTACCATCTTTaGGAGTCAGGCCTCACTGACACAGACCGTTCTGAA +
Preference number: 3 (lower is better)
Translates to: EHSASLGNCYHL*ESGLTDTDRSE
Trigger: TTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGTACACAGTTTTCCATTaGCCCTGCCCACAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMYTVFH*PCPQAR
Trigger: TCTTGCCTGTGGGCAGGGCAAATGGAAAACTGTGTA...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp AACCTGACAAGTGTCTGCTCTATGGCTAGAAGCTTCTaGACTGGGTCACCACCGACTGTGCTACCACACTCC +
Preference number: 3 (lower is better)
Translates to: NLTSVCSMARSF*TGSPPTVLPHS
Trigger: GGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGCTTCTAGCCATAGAGCAGACACTTGTCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp GGACATACGAAGTGCACGCTGGTGGGAGGCACACAATaGGAAGGTCCAGACCCTGTGTACAAAAGACCCAAA +
Preference number: 3 (lower is better)
Translates to: GHTKCTLVGGTQ*EGPDPVYKRPK
Trigger: TTTGGGTCTTTTGTACACAGGGTCTGGACCTTCTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp CTGCCTGGAATTCTTCCTTTTGCAGAGTGGAGATTCTaGCTTCATGGCCCTTCCCAGGCAGGCTCACCCAAA +
Preference number: 3 (lower is better)
Translates to: LPGILPFAEWRF*LHGPSQAGSPK
Trigger: TTTGGGTGAGCCTGCCTGGGAAGGGCCATGAAGTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp ATCTTGCTGACTGAGCACAGCGCAAGCCTGGGAAATTaGTACCATCTTTGGGAGTCAGGCCTCACTGACACA +
Preference number: 3 (lower is better)
Translates to: ILLTEHSASLGN*YHLWESGLTDT
Trigger: TGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCTCAGTCAGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp TGCTTGTATTCCCAGGGAACTGCAACATGGCCCTCATaGTCACTCTCAAGGATCAAAACGACGGAAGGCAGG +
Preference number: 3 (lower is better)
Translates to: CLYSQGTATWPS*SLSRIKTTEGR
Trigger: CCTGCCTTCCGTCGTTTTGATCCTTGAGAGTGACCATGAGGGCCATGTTGCAGTTCCCTGGGAATACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATCCTGGAAGGATTCTGTaGCTCCTTGGCAGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: EIATIFGSQASLTQTVLNPGRIL*LLGRCV
Trigger: CACACACCTGCCAAGGAGCAACAGAATCCTTCCAGG...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTCCCACAGGCAAGATGTaGCTAACGTTACACATTGAT +
Preference number: 3 (lower is better)
Translates to: SRQAMTGKGRTILWDEASPTGKM*LTLHID
Trigger: ATCAATGTGTAACGTTAGCAACATCTTGCCTGTGGG...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGTTGGAGCCCAAATATTaGGTTTGCATCTCTTTAAGT +
Preference number: 3 (lower is better)
Translates to: RDPGLDIRSARWWEAHNELEPKY*VCISLS
Trigger: ACTTAAAGAGATGCAAACCAAATATTTGGGCTCCAA...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGTTACCTATGACCCCATaGCACATAAAGTCATTTACA +
Preference number: 3 (lower is better)
Translates to: RDPGLDIRSARWWEAHNELPMTP*HIKSFT
Trigger: TGTAAATGACTTTATGTGCAATGGGGTCATAGGTAA...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp TGGCTAGAAGCTTCTGAACTGGGTCACCACCGACTGTaGTACCACACTCCCACTTACTGCATGATGCAAATG +
Preference number: 3 (lower is better)
Translates to: WLEASELGHHRL*YHTPTYCMMQM
Trigger: CATTTGCATCATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGCTTCTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp AGTGCTGCTAACCCTTCAGGATCAAGCATCCTGTTCTaGCTTGAGCCTGCAGCAGCTTCCATTCTGTCCAAT +
Preference number: 3 (lower is better)
Translates to: SAANPSGSSILF*LEPAAASILSN
Trigger: ATTGGACAGAATGGAAGCTGCTGCAGGCTCAAGGCAGAACAGGATGCTTGATCCTGAAGGGTTAGCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp GGGGCTGGTGGAGACCTTTTCACCAACACCAAGAACTaGGATCTGAAAGCTGTTATGCTTGTATTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: GAGGDLFTNTKN*DLKAVMLVFPG
Trigger: CCCTGGGAATACAAGCATAACAGCTTTCAGATCCCAGTTCTTGGTGTTGGTGAAAAGGTCTCCACCAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp ACCAACCAAGAGGTGTTCAAAGCCCAAAACAGTCCCTaGAATCAGCCATCACCAGCAAGGGGACTTAAAGAG +
Preference number: 3 (lower is better)
Translates to: TNQEVFKAQNSP*NQPSPARGLKE
Trigger: CTCTTTAAGTCCCCTTGCTGGTGATGGCTGATTCCAGGGACTGTTTTGGGCTTTGAACACCTCTTGGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp CGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTaGGATGAGGCCAGTGAAATAGAAGCTTTCTCTACA +
Preference number: 3 (lower is better)
Translates to: RQAMTGKGRTIL*DEASEIEAFST
Trigger: TGTAGAGAAAGCTTCTATTTCACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp ACACTGGAAAGTGGGCAACAAGCTTCTGGACTCCAATaGGATCAGGTCCCAGAACATGGATGTACACATGTG +
Preference number: 3 (lower is better)
Translates to: TLESGQQASGLQ*DQVPEHGCTHV
Trigger: CACATGTGTACATCCATGTTCTGGGACCTGATCTCATTGGAGTCCAGAAGCTTGTTGCCCACTTTCCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp ATTGGAAGTACTGTCAAGAGCTCAAAATGCCCACCTTaGACTTTTTGGTCACAAGGCTCCATCTGCCACGAG +
Preference number: 3 (lower is better)
Translates to: IGSTVKSSKCPP*TFWSQGSICHE
Trigger: CTCGTGGCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGACAGTACTTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp AATTCTTCCTTTTGCAGAGTGGAGATTCTGACTTCATaGCCCTTCCCAGGCAGGCTCACCCAAAGGAAAATG +
Preference number: 3 (lower is better)
Translates to: NSSFCRVEILTS*PFPGRLTQRKM
Trigger: CATTTTCCTTTGGGTGAGCCTGCCTGGGAAGGGCCATGAAGTCAGAATCTCCACTCTGCAAAAGGAAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGGGATTCTGTTGCTCCTaGGCAGGTGTGTGGTTTGCG +
Preference number: 3 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVGFCCS*AGVWFA
Trigger: CGCAAACCACACACCTGCCAAGGAGCAACAGAATCC...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATGCACCCCCAATTGTATaGGAAGTACTGTCAAGAGCT +
Preference number: 3 (lower is better)
Translates to: EIATIFGSQASLTQTVLNAPPIV*EVLSRA
Trigger: AGCTCTTGACAGTACTTCCAATACAATTGGGGGTGC...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGCACAAGCACCCCCAATaGTATTGGAAGTACTGTCAA +
Preference number: 3 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAHKHPQ*YWKYCQ
Trigger: TTGACAGTACTTCCAATACAATTGGGGGTGCTTGTG...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp GTGGAGACCTTTTCACCAACACCAAGAACTGGGATCTaGAAGCTGTTATGCTTGTATTCCCAGGGAACTGCA +
Preference number: 3 (lower is better)
Translates to: VETFSPTPRTGI*KLLCLYSQGTA
Trigger: TGCAGTTCCCTGGGAATACAAGCATAACAGCTTTCAGATCCCAGTTCTTGGTGTTGGTGAAAAGGTCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp GATCTGAAAGCTGTTATGCTTGTATTCCCAGGGAACTaGAACATGGCCCTCATGGTCACTCTCAAGGATCAA +
Preference number: 3 (lower is better)
Translates to: DLKAVMLVFPGN*NMALMVTLKDQ
Trigger: TTGATCCTTGAGAGTGACCATGAGGGCCATGTTGCAGTTCCCTGGGAATACAAGCATAACAGCTTTCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp CCATCTGGACAAACACACAAGCACCCCCAATTGTATTaGAAGTACTGTCAAGAGCTCAAAATGCCCACCTTG +
Preference number: 3 (lower is better)
Translates to: PSGQTHKHPQLY*KYCQELKMPTL
Trigger: CAAGGTGGGCATTTTGAGCTCTTGACAGTACTTCCAATACAATTGGGGGTGCTTGTGTGTTTGTCCAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp CCCAATTGTATTGGAAGTACTGTCAAGAGCTCAAAATaGCCACCTTGCACTTTTTGGTCACAAGGCTCCATC +
Preference number: 3 (lower is better)
Translates to: PNCIGSTVKSSK*PPCTFWSQGSI
Trigger: GATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGACAGTACTTCCAATACAATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp AAAGTCATTTACACTGGAAAGTGGGCAACAAGCTTCTaGACTCCAATGAGATCAGGTCCCAGAACATGGATG +
Preference number: 3 (lower is better)
Translates to: KVIYTGKWATSF*TPMRSGPRTWM
Trigger: CATCCATGTTCTGGGACCTGATCTCATTGGAGTCCAGAAGCTTGTTGCCCACTTTCCAGTGTAAATGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp GACCCCATTGCACATAAAGTCATTTACACTGGAAAGTaGGCAACAAGCTTCTGGACTCCAATGAGATCAGGT +
Preference number: 3 (lower is better)
Translates to: DPIAHKVIYTGK*ATSFWTPMRSG
Trigger: ACCTGATCTCATTGGAGTCCAGAAGCTTGTTGCCCACTTTCCAGTGTAAATGACTTTATGTGCAATGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAAGCGGCGGATGTGACTaGGGGATGTTTTCACTTGCT +
Preference number: 3 (lower is better)
Translates to: CPQRTMKVKALETARVLRSGGCD*GMFSLA
Trigger: AGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCT...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGACCCACCTTGCACTTTTaGGTCACAAGGCTCCATCTG +
Preference number: 3 (lower is better)
Translates to: CPQRTMKVKALETARVLRPTLHF*VTRLHL
Trigger: CAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGG...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAGTAACATTAACAGACTaGCCAACAGAGATGCTGAGT +
Preference number: 3 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRVTLTD*PTEMLS
Trigger: ACTCAGCATCTCTGTTGGCAAGTCTGTTAATGTTAC...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp AGGATGCCTGCTACTAAAAGCCTTCACAAGCAGAAATaGAACAAACCTGCCCTAATTCCATTGTCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: RMPATKSLHKQK*NKPALIPLSQL
Trigger: CAGCTGAGACAATGGAATTAGGGCAGGTTTGTTTCATTTCTGCTTGTGAAGGCTTTTAGTAGCAGGCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp CTGACAGGAGATGAAATGGACCTGCAGTCAGAGGCTTaGAATGAGTTAAAGCAGCAAGAATACAGGTTACGT +
Preference number: 3 (lower is better)
Translates to: LTGDEMDLQSEA*NELKQQEYRLR
Trigger: ACGTAACCTGTATTCTTGCTGCTTTAACTCATTTCAAGCCTCTGACTGCAGGTCCATTTCATCTCCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp AATTGCATTTTAACTAGAAAGCCACTTTCAATAGCGTaGTTGTCACGACAGGCTATGACGGGGAAAGGTCGC +
Preference number: 3 (lower is better)
Translates to: NCILTRKPLSIA*LSRQAMTGKGR
Trigger: GCGACCTTTCCCCGTCATAGCCTGTCGTGACAATCACGCTATTGAAAGTGGCTTTCTAGTTAAAATGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp CCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATaGCAAGGGTTAGACAATAAATGTAACTCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: PRTAKEPQTTAL*QGLDNKCNSSG
Trigger: TCCTGAGGAGTTACATTTATTGTCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACTTTTCAAGGGGGCATTaGGAGTGGAAAGCCCTGGGA +
Preference number: 3 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYFSRGH*EWKALG
Trigger: TCCCAGGGCTTTCCACTCCAAATGCCCCCTTGAAAA...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp TTCTCTACATCAAAAACAGGGAAGCTGAAGGCTAAATaGCCCACTGTCTCACAAAAGGCACTGAGTACTATG +
Preference number: 3 (lower is better)
Translates to: FSTSKTGKLKAK*PTVSQKALSTM
Trigger: CATAGTACTCAGTGCCTTTTGTGAGACAGTGGGTCATTTAGCCTTCAGCTTCCCTGTTTTTGATGTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTATACCACTACTTTTCTTaGTATGTGAACGGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLYHYFS*YVNGPG
Trigger: TCCAGGACCGTTCACATACAAAGAAAAGTAGTGGTA...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAAGCGTGGATATTGCCTaGAGATTAAGGAGCCTAACG +
Preference number: 3 (lower is better)
Translates to: CPQRTMKVKALETARVLRSVDIA*RLRSLT
Trigger: CGTTAGGCTCCTTAATCTCAAGGCAATATCCACGCT...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp ACTGTTCTTGCTGTAAACTCTGGTTGCTACAATTTATaGGGAGAAAGACTATCACCCTGGAAATTGAGGGTT +
Preference number: 3 (lower is better)
Translates to: TVLAVNSGCYNL*GERLSPWKLRV
Trigger: AACCCTCAATTTCCAGGGTGATAGTCTTTCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAAAAAATCAGTCCCTCTaGAGGGCAATTACACATCTT +
Preference number: 3 (lower is better)
Translates to: CPQRTMKVKALETARVLRKNQSL*RAITHL
Trigger: AAGATGTGTAATTGCCCTCAAGAGGGACTGATTTTT...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR TCA 72 bp AATACTGACAATGACAAGCTAAAAATCAGTCCCTCTTaGGGGCAATTACACATCTTAGAAGTGACTACACCT +
Preference number: 3 (lower is better)
Translates to: NTDNDKLKISPS*GQLHILEVTTP
Trigger: AGGTGTAGTCACTTCTAAGATGTGTAATTGCCCTCAAGAGGGACTGATTTTTAGCTTGTCATTGTCAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CCA 72 bp TTCCTTTTAAGCGCATACTGTTCTTGCTGTAAACTCTaGTTGCTACAATTTATGAGGAGAAAGACTATCACC +
Preference number: 3 (lower is better)
Translates to: FLLSAYCSCCKL*LLQFMRRKTIT
Trigger: GGTGATAGTCTTTCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGAACAGTATGCGCTTAAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp TTCCATTCACAGAATTCAGCTCAACTCCACAACATGTaGACACAATTAGGAATGATGCCTTCTTTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: FHSQNSAQLHNM*TQLGMMPSFLK
Trigger: TTTAAGAAAAGAAGGCATCATTCCTAATTGTGTGCACATGTTGTGGAGTTGAGCTGAATTCTGTGAATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR GCA 72 bp GTTAGACATAACTTCCTTTTAAGCGCATACTGTTCTTaGTGTAAACTCTGGTTGCTACAATTTATGAGGAGA +
Preference number: 3 (lower is better)
Translates to: VRHNFLLSAYCS*CKLWLLQFMRR
Trigger: TCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGAACAGTATGCGCTTAAAAGGAAGTTATGTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACTCCGGGGTGGTCGGCTaGCACACACCTGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHSGVVG*HTPGGT
Trigger: GGTTCCCCCAGGTGTGTGCCAGCCGACCACCCCGGA...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGGCAGAGGGCGGGCTGTaGGCAAGAGTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELAEGGL*ARVLCR
Trigger: CCTGCAGAGCACTCTTGCTCACAGCCCGCCCTCTGC...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGCGGCTGGCACACACCTaGGGGAACCAAAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNERLAHT*GNQSAQ
Trigger: CTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCG...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACTCTGTCCCACCTCTCTaGGCCAGCTGCCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHSVPPL*ASCLSS
Trigger: TGAGGAGAGGCAGCTGGCTCAGAGAGGTGGGACAGA...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACCTGAATGCGCTGAGGTaGGGCTACAGCAGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHLNALR*GYSRVG
Trigger: ACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAG...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTCACGCACAATGCTGCTaGAGGGACCCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SRQAMTGKGRTILWDEASHAQCC*RDPGLD
Trigger: GTCCAGCCCTGGGTCCCTTCAGCAGCATTGTGCGTG...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGCTACATTTGCCAGTGTaGCCAGAGCTCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNELHLPV*PELPGL
Trigger: CAAGCCAGGGAGCTCTGGGCACACTGGCAAATGTAG...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGCAGACTGCACCCCTGTaGAGCACATGTGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMQTAPL*STCGAS
Trigger: GCTGGCGCCACATGTGCTCCACAGGGGTGCAGTCTG...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGGGGCACCGCCTTCCCTaGGAGAAAAGTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELGHRLP*EKSGCQ
Trigger: CTGACAGCCACTTTTCTCCCAGGGAAGGCGGTGCCC...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GTCGGCTGGCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTACCACATCTTGCTGACTaGGCACAGCGCAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGWHTPGGTKVHSVLVTLPHLAD*AQRKPG
Trigger: CCCAGGCTTGCGCTGTGCTCAGTCAGCAAGATGTGG...TAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GTCGGCTGGCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAGCTCATCAGCCTGAGTaGCGGCAGGCGAACGAGGAT +
Preference number: 4 (lower is better)
Translates to: VGWHTPGGTKVHSVLVTLAHQPE*RQANED
Trigger: ATCCTCGTTCGCCTGCCGGCACTCAGGCTGATGAGC...TAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGGTGGGGCATCTGCTCTaGTGGCTCAGGCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMVGHLL*WLRHSQ
Trigger: CTGGGAATGCCTGAGCCAGCAGAGCAGATGCCCCAC...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGTGTAGCTGGCCAGACTaGACCCCTGTGGAGCACATG +
Preference number: 4 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMCSWPD*TPVEHM
Trigger: CATGTGCTCCACAGGGGTGCAGTCTGGCCAGCTACA...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTTCTATGAGCAACTACTaGTGGGCCAGGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFSMSNY*WARPWL
Trigger: GAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCATAGA...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGGGGCTGGTCATCCCTaGAGATTCCGGCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCGAGHP*RFRPRG
Trigger: ACCTCTCGGCCGGAATCTCCAGGGATGACCAGCCCC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000425241.5
CDS-3UTR CCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGGAATCCGTGACAATCTaGATCCTGCCAGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELESVTI*ILPGTR
Trigger: CCTCGTCCCTGGCAGGATCCAGATTGTCACGGATTC...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGAGAGACTCATGACCTaGGCACACTGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCERLMT*AHWARP
Trigger: CGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACATGCTGTTCTGCAGGTaGTTGACAATGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHMLFCR*LTMAAR
Trigger: CCTGGCTGCCATTGTCAACCACCTGCAGAACAGCAT...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCAGAGGCAGAATCCGTaGCAATCTGGATCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFQRQNP*QSGSCQ
Trigger: CTGGCAGGATCCAGATTGTCACGGATTCTGCCTCTG...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGGCCAGGCCGAGGGTaGAGAGCTCATTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCGPGRG*RAHSSR
Trigger: CCTGCTGGAATGAGCTCTTCACCCTCGGCCTGGCCC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTTGGAGCTCATCAGCCTaGGTGCCGGCAGGCGAACGA +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLWSSSA*VPAGER
Trigger: TCGTTCGCCTGCCGGCACTCAGGCTGATGAGCTCCA...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGAAAGGTCAGAGTTCGTaGCCCCGGTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRKGQSS*PRCRRR
Trigger: GCGGCGGCGGCACCGGGGTCACGAACTCTGACCTTT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425241.5
CDS-3UTR TCA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTCACGAGCGGCGGATGTaGCTTGGGGATGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: PAPIQPHSYDGAAETRALHERRM*LGDVFT
Trigger: AGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTG...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGCCCCACATCTTGCTaGCTGAGCACAGCGCAAGCC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCPTSC*LSTAQA
Trigger: GGCTTGCGCTGTGCTCAGTCAGCAAGATGTGGGGCA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGCCACTTTCAATAGCGTaGTTGTCACGACAGGCTATG +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEPLSIA*LSRQAM
Trigger: CATAGCCTGTCGTGACAATCACGCTATTGAAAGTGG...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGTATCCAGCTTCGCCATaGTGTTACAGAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEYPASP*CYRTPA
Trigger: TGCAGGAGTTCTGTAACAGCATGGCGAAGCTGGATA...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGTCAAGCATCCTGTTCTaGCTTGAGCCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELSSILF*LEPAAA
Trigger: AGCTGCTGCAGGCTCAAGGCAGAACAGGATGCTTGA...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTACCACCTGGGGCCGCTaGACGTCCGTCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCTTWGR*TSVFPS
Trigger: ACTGGGGAAGACGGACGTCCAGCGGCCCCAGGTGGT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGGTATGTGAACGGTCCTaGAAGGATTCTGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEVCERS*KDSVAP
Trigger: AGGAGCAACAGAATCCTTCCAGGACCGTTCACATAC...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GTCGGCTGGCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAGAGAGGAGGGGCTGGTaGAGACCTTTTCACCAACAC +
Preference number: 4 (lower is better)
Translates to: VGWHTPGGTKVHSVLVTLERRGW*RPFHQH
Trigger: GTGTTGGTGAAAAGGTCTCCACCAGCCCCTCCTCTC...TAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGGGTCGCACAATCTTGTaGGATGAGGCCAGTGAAATA +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEGRTIL*DEASEI
Trigger: TATTTCACTGGCCTCATCCCACAAGATTGTGCGACC...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCTGAATGCGCTGAGGTaGGGCTACAGCAGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCLNALR*GYSRVG
Trigger: ACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTCCTGCCCAAGTGCCTaGAAGGCTGGGATTGACCGA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCSCPSA*KAGIDR
Trigger: TCGGTCAATCCCAGCCTTTCAGGCACTTGGGCAGGA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGGCCAGGCCGAGGGTaGAGAGCTCATTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGPGRG*RAHSSR
Trigger: CCTGCTGGAATGAGCTCTTCACCCTCGGCCTGGCCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTGGAGCTCATCAGCCTaGGTGCCGGCAGGCGAACGA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCWSSSA*VPAGER
Trigger: TCGTTCGCCTGCCGGCACTCAGGCTGATGAGCTCCA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGCAGGTTACGTGGACATaGTCCTTAAAGAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEQVTWT*SLKKRP
Trigger: TGGCCTTTTCTTTAAGGATCATGTCCACGTAACCTG...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTGTAGAAGAGGGAGCATaGACGTGGCTCCATGGAGTT +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFVEEGA*TWLHGV
Trigger: AACTCCATGGAGCCACGTTCATGCTCCCTCTTCTAC...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGGCTTCTGGACTCCAATaGGATCAGGTCCCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELASGLQ*DQVPEH
Trigger: ATGTTCTGGGACCTGATCTCATTGGAGTCCAGAAGC...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGTGGGAGGCACACAATaGGAAGGTCCAGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSVGGTQ*EGPDPV
Trigger: CACAGGGTCTGGACCTTCTCATTGTGTGCCTCCCAC...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGGCTACTCAACAGAGCTaGATAGCTGGGAAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELATQQS*IAGKAD
Trigger: ATCAGCCTTCCCAGCTATTCAGCTCTGTTGAGTAGC...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGAAGACCTGTTTGTCTTaGTCCATCTTTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEKTCLS*SIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTT...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGCACAAGGCTGGTGTTaGAGTCCTGCCCAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCAQGWC*SPAQVP
Trigger: AGGCACTTGGGCAGGACTGCAACACCAGCCTTGTGC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGATGTGCTCCATGACTTaGTTTATCCGGTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEMCSMT*FIRSPE
Trigger: TTCTGGTGACCGGATAAAGCAAGTCATGGAGCACAT...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGATTATCTGGATGCGTaGGGAGGGGCTGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCDYLDA*GGAGHP
Trigger: GGGATGACCAGCCCCTCCCCACGCATCCAGATAATC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000425241.5
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTCGGTGGAGATTATCTaGATGCGTGGGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCSVEII*MRGEGL
Trigger: CAGCCCCTCCCCACGCATCCAGATAATCTCCACCGA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGACCACCTGGGGCCGCTaGACGTCCGTCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRTTWGR*TSVFPS
Trigger: ACTGGGGAAGACGGACGTCCAGCGGCCCCAGGTGGT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGACCACCTGGGGCCGCTaGACGTCCGTCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGTTWGR*TSVFPS
Trigger: ACTGGGGAAGACGGACGTCCAGCGGCCCCAGGTGGT...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCAGTACTCTACCACCTaGGGCCGCTGGACGTCCGTC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCQYSTT*GRWTSV
Trigger: GACGGACGTCCAGCGGCCCCAGGTGGTAGAGTACTG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTATGATGGGTGTCGACTaGTCTCTGCTGATGACGTGG +
Preference number: 4 (lower is better)
Translates to: PAPIQPHSYDGAAETRALMMGVD*SLLMTW
Trigger: CCACGTCATCAGCAGAGACCAGTCGACACCCATCAT...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGATGACCTGGGCACACTaGGCCAGGCCGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQMTWAH*ARPRVK
Trigger: CTTCACCCTCGGCCTGGCCCAGTGTGCCCAGGTCAT...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGAGAGACTCATGACCTaGGCACACTGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCERLMT*AHWARP
Trigger: CGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGGAGAGACTCATGACCTaGGCACACTGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQERLMT*AHWARP
Trigger: CGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTC...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTCCTGTGGAGCACATGTaGCGCCAGCCTGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLPVEHM*RQPEPD
Trigger: ATCTGGCTCAGGCTGGCGCCACATGTGCTCCACAGG...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGGGGCATCTGCTCTGCTaGCTCAGGCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQGHLLC*LRHSQG
Trigger: GCCCTGGGAATGCCTGAGCCAGCAGAGCAGATGCCC...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTATACGAAGTGCACGCTaGTGGGAGGCACACAATGAG +
Preference number: 4 (lower is better)
Translates to: SRQAMTGKGRTILWDEASIRSAR*WEAHNE
Trigger: CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTAT...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp CACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTaGGGGATGTTTTCACTTGCTGGAGGAACTGTACAT +
Preference number: 4 (lower is better)
Translates to: HKAPSATSGGCD*GMFSLAGGTVH
Trigger: ATGTACAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTAGGGACGAGGTTGTCTaGGGTGGTGAATATGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRQAMTGKGRTILWDEASRDEVV*GGEYEL
Trigger: CAACTCATATTCACCACCTCAGACAACCTCGTCCCT...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCAGAGGCAGAATCCGTaGCAATCTGGATCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCQRQNP*QSGSCQ
Trigger: CTGGCAGGATCCAGATTGTCACGGATTCTGCCTCTG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGTCCTCACACTCCTTTTaGAGAAACCTTTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNESSHSF*RNLCNL
Trigger: AAGGTTGCAAAGGTTTCTTCAAAAGGAGTGTGAGGA...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGGCCTTCAACCTCAATaGTGGGTGTCGACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCGLQPQ*WVSTGL
Trigger: GAGACCAGTCGACACCCATCATTGAGGTTGAAGGCC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGTGACGTGTGTGTCTaGAAGGAGGGGGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCDVCV*KEGAFN
Trigger: GTTGAAGGCCCCCTCCTTTCAGACACACACGTCACA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTTCCTGCCCAAGTGCCTaGAAGGCTGGGATTGACCGA +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLSCPSA*KAGIDR
Trigger: TCGGTCAATCCCAGCCTTTCAGGCACTTGGGCAGGA...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTGGTGGAGAGACTCATaGCCTGGGCACACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCWWRDS*PGHTGP
Trigger: TGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGTGGTGGAGAGACTCATaGCCTGGGCACACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQWWRDS*PGHTGP
Trigger: TGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCA...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGTTCTGCAGGTGGTTaGCAATGGCAGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCSAGG*QWQPGW
Trigger: CCATCCTGGCTGCCATTGTCAACCACCTGCAGAACA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGTCGGTAGGTGTCTTCTaGGTAGGTTTTCTGAACATA +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNESVGVF*VGFLNI
Trigger: TATGTTCAGAAAACCTACTCAGAAGACACCTACCGA...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGGAGCTCATCAGCCTaGGTGCCGGCAGGCGAACGA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRWSSSA*VPAGER
Trigger: TCGTTCGCCTGCCGGCACTCAGGCTGATGAGCTCCA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTAGTAGTCAGGGAACCTaGCAAGTGTCTGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFSSQGT*QVSALW
Trigger: CCATAGAGCAGACACTTGTCAGGTTCCCTGACTACT...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTAGATCAGAGCACCTGTaGGTCAGGGGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLRSEHL*VRGVSR
Trigger: CCTGGACACTCCCCTGACTCACAGGTGCTCTGATCT...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGCATGTGGCGCCAGCCTaGGCCAGATCAGAGCACCTG +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGHVAPA*ARSEHL
Trigger: CAGGTGCTCTGATCTGGCTCAGGCTGGCGCCACATG...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCTGGTCAGGATGAACTaGTGTTTGGGGGATCCGGAG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCLVRMN*CLGDPE
Trigger: CTCCGGATCCCCCAAACAGCAGTTCATCCTGACCAG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTCTGGTCAGGATGAACTaGTGTTTGGGGGATCCGGAG +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSLVRMN*CLGDPE
Trigger: CTCCGGATCCCCCAAACAGCAGTTCATCCTGACCAG...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCTACATTTGCCAGTGTaGCCAGAGCTCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCLHLPV*PELPGL
Trigger: CAAGCCAGGGAGCTCTGGGCACACTGGCAAATGTAG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGGAGGTCACTACATTTaGCAGTGTGCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCGGHYI*QCAQSS
Trigger: GGAGCTCTGGGCACACTGGCAAATGTAGTGACCTCC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGGAGGTCACTACATTTaGCAGTGTGCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSGGHYI*QCAQSS
Trigger: GGAGCTCTGGGCACACTGGCAAATGTAGTGACCTCC...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGGCACAAGGCTGGTGTTaGAGTCCTGCCCAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAAQGWC*SPAQVP
Trigger: AGGCACTTGGGCAGGACTGCAACACCAGCCTTGTGC...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGCTCATCAGCCTGAGTaGCGGCAGGCGAACGAGGAT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCAHQPE*RQANED
Trigger: ATCCTCGTTCGCCTGCCGGCACTCAGGCTGATGAGC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCAGTACTCTACCACCTaGGGCCGCTGGACGTCCGTC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRQYSTT*GRWTSV
Trigger: GACGGACGTCCAGCGGCCCCAGGTGGTAGAGTACTG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGCTCCCTCCTCCACTaGTGTCTATCCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCSLLH*CLSHLP
Trigger: TGGCAGATGGGATAGACACCAGTGGAGGAGGGAGCA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTCACGTTGAGGTACTCTaGCATTGGACTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PAPIQPHSYDGAAETRALHVEVL*HWTGHC
Trigger: ACAATGCCCAGTCCAATGCCAGAGTACCTCAACGTG...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGATGACCTGGGCACACTaGGCCAGGCCGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRMTWAH*ARPRVK
Trigger: CTTCACCCTCGGCCTGGCCCAGTGTGCCCAGGTCAT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTTGTGCTGGTCAAACCTaGATGATCGGGGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFCAGQT*MIGAKE
Trigger: CTCTTTAGCCCCGATCATCCAGGTTTGACCAGCACA...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTATGAACGTGGCTCCATaGAGTTCAGTAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFMNVAP*SSVARG
Trigger: TCCTCTGGCTACTGAACTCCATGGAGCCACGTTCAT...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGTGGGCAACAAGCTTCTaGACTCCAATGAGATCAGGT +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELWATSF*TPMRSG
Trigger: ACCTGATCTCATTGGAGTCCAGAAGCTTGTTGCCCA...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGCACTTGAGTTGTGTGTaGCAGCAGCATTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELHLSCV*QQHLSP
Trigger: TGGACTCAAATGCTGCTGCCACACACAACTCAAGTG...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp TACTGTCAAGAGCTCAAAATGCCCACCTTGCACTTTTaGGTCACAAGGCTCCATCTGCCACGAGCGGCGGAT +
Preference number: 4 (lower is better)
Translates to: YCQELKMPTLHF*VTRLHLPRAAD
Trigger: ATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTGAATGCGCTGAGGTaGGGCTACAGCAGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLNALR*GYSRVG
Trigger: ACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCAGGCGTCCACTGCGGTaGCTATCTGGATTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCRRPLR*LSGFSV
Trigger: GACAGAAAATCCAGATAGTCACCGCAGTGGACGCCT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTCTCTGGCTGGATTTCTaGAGTGTCACCGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: PAPIQPHSYDGAAETRALLWLDF*SVTVVQ
Trigger: TTGAACAACGGTGACACTTCAGAAATCCAGCCAGAG...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGGTGGAGAGACTCATaGCCTGGGCACACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRWWRDS*PGHTGP
Trigger: TGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCTGTCTGCTGGTCTGTaGCAATCTGAATGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCLSAGL*QSECAE
Trigger: CTCAGCGCATTCAGATTGTCACAGACCAGCAGACAG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425241.5
CDS-3UTR TCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTATGGCTAGAAGCTTCTaGACTGGGTCACCACCGACT +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSMARSF*TGSPPT
Trigger: AGTCGGTGGTGACCCAGTTCAGAAGCTTCTAGCCAT...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACCCAAGAACTGGGATCTaGAAGCTGTTATGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHPRTGI*KLLCLY
Trigger: ATACAAGCATAACAGCTTTCAGATCCCAGTTCTTGG...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTGTCACGACAGGCTATaGCGGGGAAAGGTCGCACAA +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIACHDRL*RGKVAQ
Trigger: TTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGACA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTCCGGAGGCGTCCACTaGGGTGACTATCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCSGGVH*GDYLDF
Trigger: AAAATCCAGATAGTCACCGCAGTGGACGCCTCCGGA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGTCACGTATCAAAGGCTaGTGGATGTTCACAAGCATC +
Preference number: 4 (lower is better)
Translates to: LPRAADVTWGCFHLLEELSRIKG*WMFTSI
Trigger: GATGCTTGTGAACATCCAGCAGCCTTTGATACGTGA...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGCACAAGGCTGGTGTTaGAGTCCTGCCCAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCAQGWC*SPAQVP
Trigger: AGGCACTTGGGCAGGACTGCAACACCAGCCTTGTGC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGCTCATCAGCCTGAGTaGCGGCAGGCGAACGAGGAT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRAHQPE*RQANED
Trigger: ATCCTCGTTCGCCTGCCGGCACTCAGGCTGATGAGC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGCAGGTGTGTGGTTTaGGCTATAGACTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCGRCVV*AIDWLR
Trigger: CCGGAGCCAGTCTATAGCGCAAACCACACACCTGCC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGGGTCACCACCGACTGTaGTACCACACTCCCACTTAC +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAGHHRL*YHTPTY
Trigger: GTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACC...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGTATTCCCAGGGAACTaGAACATGGCCCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSVFPGN*NMALMV
Trigger: GACCATGAGGGCCATGTTGCAGTTCCCTGGGAATAC...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGTTACCTCAGGATTTaGCGCCAAAGCGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCYLRI*RQSGLE
Trigger: TTCGAGGCCGCTTTGGCGCCAAATCCTGAGGTAACA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000425241.5
CDS-3UTR CCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTTGTGAAAACACTCAATaGGCCAGAGGCAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SRQAMTGKGRTILWDEASCENTQ*ARGRFR
Trigger: TCTGAACCTGCCTCTGGCCCATTGAGTGTTTTCACA...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGCGCTGGATGTCTCTaGGGAAGCCAGGATCACCTT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCGAGCL*GSQDHL
Trigger: AAGGTGATCCTGGCTTCCCCAGAGACATCCAGCGCC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGTGCCCAGAGCTCCCTaGCTTGTTTCAGCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCVPRAP*LVSALE
Trigger: TTCTAAGGCTGAAACAAGCCAGGGAGCTCTGGGCAC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACAAGATTCACTTAGGTTaGCAAGGGAGGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHKIHLG*QGRSLH
Trigger: ATGTAGTGACCTCCCTTGCCAACCTAAGTGAATCTT...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGACTGGTCCTCTGGCTaGATTTCTGAAGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCDWSSG*ISEVSP
Trigger: CGGTGACACTTCAGAAATCCAGCCAGAGGACCAGTC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATGATGGGTGTCGACTaGTCTCTGCTGATGACGTGG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCMMGVD*SLLMTW
Trigger: CCACGTCATCAGCAGAGACCAGTCGACACCCATCAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGATTCTGTTGCTCCTTaGCAGGTGTGTGGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCDSVAP*QVCGLR
Trigger: GCGCAAACCACACACCTGCCAAGGAGCAACAGAATC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGGAGTGGAAAGCCCTaGGAAGGTAACGCTCACACT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCWSGKP*EGNAHT
Trigger: AGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACATTTACACTGGAAAGTaGGCAACAAGCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHIYTGK*ATSFWT
Trigger: AGTCCAGAAGCTTGTTGCCCACTTTCCAGTGTAAAT...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGAAGGGACCCAGGGCTaGACATACGAAGTGCACGCT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCEGTQG*TYEVHA
Trigger: AGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCTTC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGAGCACAGCGCAAGCCTaGGAAATTGCTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMSTAQA*EIATIF
Trigger: AAAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCT...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGTGCTGGGCCAGGCCCTaGCTCTCAAGGGCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVCWARP*LSRAES
Trigger: AGACTCGGCCCTTGAGAGCCAGGGCCTGGCCCAGCA...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCAGGGACGAGGTTGTCTaGGGTGGTGAATATGAGTTG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCRDEVV*GGEYEL
Trigger: CAACTCATATTCACCACCTCAGACAACCTCGTCCCT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCAGAGGCAGAATCCGTaGCAATCTGGATCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCQRQNP*QSGSCQ
Trigger: CTGGCAGGATCCAGATTGTCACGGATTCTGCCTCTG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTGCAACCTTCACAACTaGCAGCCCCATAGTGACGGC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCCNLHN*QPHSDG
Trigger: GCCGTCACTATGGGGCTGTCAGTTGTGAAGGTTGCA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGCCTTCAACCTCAATaGTGGGTGTCGACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCGLQPQ*WVSTGL
Trigger: GAGACCAGTCGACACCCATCATTGAGGTTGAAGGCC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTCCTGCCCAAGTGCCTaGAAGGCTGGGATTGACCGA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRSCPSA*KAGIDR
Trigger: TCGGTCAATCCCAGCCTTTCAGGCACTTGGGCAGGA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTGGGCCAGGCCGAGGGTaGAGAGCTCATTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCGPGRG*RAHSSR
Trigger: CCTGCTGGAATGAGCTCTTCACCCTCGGCCTGGCCC...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATAGACTGGCTCCGGTaGTCTGGCCATTATACTCTG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCIDWLR*SGHYTL
Trigger: CAGAGTATAATGGCCAGATCACCGGAGCCAGTCTAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCTGGCTGCCACTGAATaGCCTGGGAATGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRLAATE*PGNERR
Trigger: CCTCCTCTCATTCCCAGGTCATTCAGTGGCAGCCAG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGTTCAGAGCCCTGAATaGGCTGAGGTGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCVQSPE*AEVRLQ
Trigger: CTGTAGCCTCACCTCAGCGCATTCAGGGCTCTGAAC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTGGTCAGGATGAACTaGTGTTTGGGGGATCCGGAG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLVRMN*CLGDPE
Trigger: CTCCGGATCCCCCAAACAGCAGTTCATCCTGACCAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTGGCTTCCGTTCACTCTaGACAGATTCCATTTTCATG +
Preference number: 4 (lower is better)
Translates to: SRQAMTGKGRTILWDEASGFRSL*TDSIFM
Trigger: CATGAAAATGGAATCTGTGCAGAGTGAACGGAAGCC...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGCTCCATCTTTGTCTaGCACAAACGTGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCSIFV*HKRGSS
Trigger: GCTACTCCCACGTTTGTGGCAGACAAAGATGGAGCA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGGTGTCTATCCCATCTaGCAAGCTTGGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCGVYPI*QAWRRG
Trigger: TCCTCTTCTCCAAGCTTGGCAGATGGGATAGACACC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGTTTTCCATTTGCCCTaGCCACAGGCAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCVFHLP*PQARCC
Trigger: GCAACATCTTGCCTGTGGGCAGGGCAAATGGAAAAC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTTCAAAATGCCCACCTTaGACTTTTTGGTCACAAGGC +
Preference number: 4 (lower is better)
Translates to: SRQAMTGKGRTILWDEASSKCPP*TFWSQG
Trigger: GCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGA...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTGTCAAGAGCTCAAAATaGCCACCTTGCACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFVKSSK*PPCTFW
Trigger: CCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGAC...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGAGCACGTGGGGCATCTaGTCTGCTGGCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRSTWGI*SAGSGI
Trigger: AATGCCTGAGCCAGCAGAGCAGATGCCCCACGTGCT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATCCAGCAAATCTTCCCTaGCGAGGGACCTTGGAACAC +
Preference number: 4 (lower is better)
Translates to: EIATIFGSQASLTQTVLNPANLP*RGTLEH
Trigger: GTGTTCCAAGGTCCCTCGGCAGGGAAGATTTGCTGG...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCTACAGCAGAGTCGGTaGAGATTATCTGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCLQQSR*RLSGCV
Trigger: CACGCATCCAGATAATCTCCACCGACTCTGCTGTAG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGCGCTGGATGTCTCTaGGGAAGCCAGGATCACCTT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGAGCL*GSQDHL
Trigger: AAGGTGATCCTGGCTTCCCCAGAGACATCCAGCGCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAGGCGCTGGATGTCTCTaGGGAAGCCAGGATCACCTT +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRGAGCL*GSQDHL
Trigger: AAGGTGATCCTGGCTTCCCCAGAGACATCCAGCGCC...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGAATCCGTGACAATCTaGATCCTGCCAGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCESVTI*ILPGTR
Trigger: CCTCGTCCCTGGCAGGATCCAGATTGTCACGGATTC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGCAGTACTCTACCACCTaGGGCCGCTGGACGTCCGTC +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVQYSTT*GRWTSV
Trigger: GACGGACGTCCAGCGGCCCCAGGTGGTAGAGTACTG...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCACGTTGAGGTACTCTaGCATTGGACTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCHVEVL*HWTGHC
Trigger: ACAATGCCCAGTCCAATGCCAGAGTACCTCAACGTG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTGAAAGTTTATCTTCCTaGATGCTGTTCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFESLSS*MLFCRW
Trigger: CCACCTGCAGAACAGCATCCAGGAAGATAAACTTTC...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCAATCTGGCTTGTGCTaGTCAAACCTGGATGATCGG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCQSGLC*SNLDDR
Trigger: CCGATCATCCAGGTTTGACCAGCACAAGCCAGATTG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTCAATCTGGCTTGTGCTaGTCAAACCTGGATGATCGG +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSQSGLC*SNLDDR
Trigger: CCGATCATCCAGGTTTGACCAGCACAAGCCAGATTG...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTGATTCTGTTGCTCCTTaGCAGGTGTGTGGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLDSVAP*QVCGLR
Trigger: GCGCAAACCACACACCTGCCAAGGAGCAACAGAATC...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTCACCCCCAATTGTATTaGAAGTACTGTCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PAPIQPHSYDGAAETRALHPQLY*KYCQEL
Trigger: GAGCTCTTGACAGTACTTCCAATACAATTGGGGGTG...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGAGGGGCGTCTGTAGCTaGCCAGACTGCACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVRGVCS*PDCTPV
Trigger: CACAGGGGTGCAGTCTGGCCAGCTACAGACGCCCCT...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTCCTGCCGAGGGACCTTaGAACACCCATATCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSPAEGP*NTHISL
Trigger: TAAACTGATATGGGTGTTCCAAGGTCCCTCGGCAGG...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGATGAGCAACTACTGCTaGGCCAGGCCCTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRMSNYC*ARPWLS
Trigger: TGAGAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCAT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp CCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTaGCAGAGTGGAGATTCTGACTTCATGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PCQNLFCLEFFL*QSGDSDFMALP
Trigger: GGGAAGGGCCATGAAGTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGCCTTCAACCTCAATaGTGGGTGTCGACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGLQPQ*WVSTGL
Trigger: GAGACCAGTCGACACCCATCATTGAGGTTGAAGGCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTTCTGCAGGTGGTTaGCAATGGCAGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRCSAGG*QWQPGW
Trigger: CCATCCTGGCTGCCATTGTCAACCACCTGCAGAACA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTCCAGATGTGCTCCATaGCTTGCTTTATCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIASRCAP*LALSGH
Trigger: GTGACCGGATAAAGCAAGTCATGGAGCACATCTGGA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGTGTACACATGTGGCATaGACTGCTGATTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQCTHVA*TADCGQ
Trigger: CTGGCCGCAATCAGCAGTTCATGCCACATGTGTACA...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTAAAGAGCCTCATAACTaGGAGAATGGAAGCTGGATA +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFKEPHN*ENGSWI
Trigger: TATCCAGCTTCCATTCTCTCAGTTATGAGGCTCTTT...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGTTCAGAGCCCTGAATaGGCTGAGGTGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRVQSPE*AEVRLQ
Trigger: CTGTAGCCTCACCTCAGCGCATTCAGGGCTCTGAAC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTTGGTTTCTCCCGTTaGACATCGAAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLGFSR*TSKGFR
Trigger: ACGGAAGCCCTTCGATGTGCAACGGGAGAAACCAAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGAGGTCACTACATTTaGCAGTGTGCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGGHYI*QCAQSS
Trigger: GGAGCTCTGGGCACACTGGCAAATGTAGTGACCTCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGGGTGTCTATCCCATCTaGCAAGCTTGGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAGVYPI*QAWRRG
Trigger: TCCTCTTCTCCAAGCTTGGCAGATGGGATAGACACC...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGAAAAGCAGACGGGATaGAGACTCACAGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCEKQTG*RLTDVV
Trigger: CACTACATCTGTGAGTCTGCATCCCGTCTGCTTTTC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATTGACCGAGCCCAGTaGATTGAGAGGAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCIDRAQ*IERKSR
Trigger: TCTGCTTTTCCTCTCAATGCACTGGGCTCGGTCAAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGTTTCAATCTGGCTTGTaGTGGTCAAACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMFQSGL*WSNLDD
Trigger: ATCATCCAGGTTTGACCAGCACAAGCCAGATTGAAA...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAAGCCTGCATTTAAAATaGTCCGGGGTGGTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRSLHLK*SGVVGW
Trigger: CCAGCCGACCACCCCGGAGCATTTTAAATGCAGGCT...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GTCGGCTGGCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAAGCGCATACTGTTCTTaGTGTAAACTCTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: VGWHTPGGTKVHSVLVTLSAYCS*CKLWLL
Trigger: TAGCAACCAGAGTTTACAGCAAGAACAGTATGCGCT...TAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGCTCTCCAAAATTTGCTaGCAAGGCAAGAATTATAAA +
Preference number: 4 (lower is better)
Translates to: RDPGLDIRSARWWEAHNELSKIC*QGKNYK
Trigger: TTTATAATTCTTGCCTTGGCAGCAAATTTTGGAGAG...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTGTTACCTCAGGATTTaGCGCCAAAGCGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCCYLRI*RQSGLE
Trigger: TTCGAGGCCGCTTTGGCGCCAAATCCTGAGGTAACA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000425241.5
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGTGAAAACACTCAATaGGCCAGAGGCAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCENTQ*ARGRFR
Trigger: TCTGAACCTGCCTCTGGCCCATTGAGTGTTTTCACA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCACTGCGGTGACTATCTaGATTTTCTGTCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCTAVTI*IFCPVC
Trigger: GCAGACAGGACAGAAAATCCAGATAGTCACCGCAGT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTAGTTCCAGCTCCATCTaGGCTGGTCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCSSSSI*AGQDEL
Trigger: CAGTTCATCCTGACCAGCCCAGATGGAGCTGGAACT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGAATCCGTGACAATCTaGATCCTGCCAGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRESVTI*ILPGTR
Trigger: CCTCGTCCCTGGCAGGATCCAGATTGTCACGGATTC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCAGCAGCACAATTGCTTaGTTTCTCCCGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCSSTIA*FLPLHI
Trigger: GATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATCTCACTTGCAGACTaGTCCTCTGGCTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCISLAD*SSGWIS
Trigger: AGAAATCCAGCCAGAGGACCAGTCTGCAAGTGAGAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGCTCCCTCCTCCACTaGTGTCTATCCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRCSLLH*CLSHLP
Trigger: TGGCAGATGGGATAGACACCAGTGGAGGAGGGAGCA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTATGATGGGTGTCGACTaGTCTCTGCTGATGACGTGG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCMMGVD*SLLMTW
Trigger: CCACGTCATCAGCAGAGACCAGTCGACACCCATCAT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTATGCTGTTCTGCAGGTaGTTGACAATGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCMLFCR*LTMAAR
Trigger: CCTGGCTGCCATTGTCAACCACCTGCAGAACAGCAT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTGGCTCCGGTGATCTaGCCATTATACTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLAPVI*PLYSAV
Trigger: GACAGCAGAGTATAATGGCCAGATCACCGGAGCCAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGATTCTGTTGCTCCTTaGCAGGTGTGTGGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCDSVAP*QVCGLR
Trigger: GCGCAAACCACACACCTGCCAAGGAGCAACAGAATC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGTATGTGAACGGTCCTaGAAGGATTCTGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCVCERS*KDSVAP
Trigger: AGGAGCAACAGAATCCTTCCAGGACCGTTCACATAC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGCAACATGGCCCTCATaGTCACTCTCAAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSATWPS*SLSRIK
Trigger: TTTGATCCTTGAGAGTGACCATGAGGGCCATGTTGC...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGACGAAGTGCACGCTGGTaGGAGGCACACAATGAGAAG +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRRSARW*EAHNEK
Trigger: CTTCTCATTGTGTGCCTCCCACCAGCGTGCACTTCG...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTaGTGGGATGAGGCCAGTGAAATAGAAGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SRQAMTGKGRTI*WDEASEIEAFS
Trigger: AGAGAAAGCTTCTATTTCACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTAGGGACGAGGTTGTCTaGGGTGGTGAATATGAGTTG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCRDEVV*GGEYEL
Trigger: CAACTCATATTCACCACCTCAGACAACCTCGTCCCT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTCCAGATGTGCTCCATaGCTTGCTTTATCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCSRCAP*LALSGH
Trigger: GTGACCGGATAAAGCAAGTCATGGAGCACATCTGGA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTTGTGGCATGAACTGCTaGTTGCGGCCAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCCGMNC*LRPGAG
Trigger: TCCAGCCCCTGGCCGCAATCAGCAGTTCATGCCACA...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGGCTTCCGTTCACTCTaGACAGATTCCATTTTCATG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCGFRSL*TDSIFM
Trigger: CATGAAAATGGAATCTGTGCAGAGTGAACGGAAGCC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATTGCTCCATCTTTGTCTaGCACAAACGTGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: EIATIFGSQASLTQTVLNCSIFV*HKRGSS
Trigger: GCTACTCCCACGTTTGTGGCAGACAAAGATGGAGCA...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCAAGACCTGTTTGTCTTaGTCCATCTTTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCKTCLS*SIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTATTGACCGAGCCCAGTaGATTGAGAGGAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLIDRAQ*IERKSR
Trigger: TCTGCTTTTCCTCTCAATGCACTGGGCTCGGTCAAT...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATGTGCTCCATGACTTaGTTTATCCGGTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCMCSMT*FIRSPE
Trigger: TTCTGGTGACCGGATAAAGCAAGTCATGGAGCACAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTGCAGCTTCCAGATGTaGTCCATGACTTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCCSFQM*SMTCFI
Trigger: GATAAAGCAAGTCATGGAGCACATCTGGAAGCTGCA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTCTGGCCATTATACTCTaGTGTCTCCATCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSLAIIL*CLHLED
Trigger: ATCCTCAAGATGGAGACAGCAGAGTATAATGGCCAG...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGCACACTCCCACTTACTaGATGATGCAAATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAHTPTY*MMQMSH
Trigger: GTGGCTCATTTGCATCATGCAGTAAGTGGGAGTGTG...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTAACCTGACAAGTGTCTaGTCTATGGCTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSNLTSV*SMARSF
Trigger: GAAGCTTCTAGCCATAGAGCAGACACTTGTCAGGTT...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGACCGGGTCTTCCACATaGCACTGTTCTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQTGSST*HCSQTG
Trigger: TCCTGTTTGAGAACAGTGGCATGTGGAAGACCCGGT...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTACAGCAGAGTCGGTaGAGATTATCTGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLQQSR*RLSGCV
Trigger: CACGCATCCAGATAATCTCCACCGACTCTGCTGTAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGAGTTCCAGCTCCATCTaGGCTGGTCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRSSSSI*AGQDEL
Trigger: CAGTTCATCCTGACCAGCCCAGATGGAGCTGGAACT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCVHKHP*IKKTCL
Trigger: CAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAAC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGACTGGTCCTCTGGCTaGATTTCTGAAGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRDWSSG*ISEVSP
Trigger: CGGTGACACTTCAGAAATCCAGCCAGAGGACCAGTC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTATCTCACTTGCAGACTaGTCCTCTGGCTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLISLAD*SSGWIS
Trigger: AGAAATCCAGCCAGAGGACCAGTCTGCAAGTGAGAT...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCACGTTGAGGTACTCTaGCATTGGACTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCHVEVL*HWTGHC
Trigger: ACAATGCCCAGTCCAATGCCAGAGTACCTCAACGTG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGATGCTGTTCTGCAGGTaGTTGACAATGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRMLFCR*LTMAAR
Trigger: CCTGGCTGCCATTGTCAACCACCTGCAGAACAGCAT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGAAAGTTTATCTTCCTaGATGCTGTTCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCESLSS*MLFCRW
Trigger: CCACCTGCAGAACAGCATCCAGGAAGATAAACTTTC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTGTGCTGGTCAAACCTaGATGATCGGGGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCCAGQT*MIGAKE
Trigger: CTCTTTAGCCCCGATCATCCAGGTTTGACCAGCACA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCTGGCTCCGGTGATCTaGCCATTATACTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRLAPVI*PLYSAV
Trigger: GACAGCAGAGTATAATGGCCAGATCACCGGAGCCAG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGCTGGCTCCGGTGATCTaGCCATTATACTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGLAPVI*PLYSAV
Trigger: GACAGCAGAGTATAATGGCCAGATCACCGGAGCCAG...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGACAGGGAACTGCAACATaGCCCTCATGGTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRQGTAT*PSWSLS
Trigger: TGAGAGTGACCATGAGGGCCATGTTGCAGTTCCCTG...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTAATTGCTACCATCTTTaGGAGTCAGGCCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLNCYHL*ESGLTD
Trigger: GTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATT...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp TACTATTTATTCAGTCATAGGACAGTGCCCCACATCTaGCTGACTGAGCACAGCGCAAGCCTGGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: YYLFSHRTVPHI*LTEHSASLGNC
Trigger: GCAATTTCCCAGGCTTGCGCTGTGCTCAGTCAGCAAGATGTGGGGCACTGTCCTATGACTGAATAAATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCTTTGTTCAAAGATGTaGAAACACTCAATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCLCSKM*KHSMGQ
Trigger: CTGGCCCATTGAGTGTTTTCACATCTTTGAACAAAG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTCTGGCTGGATTTCTaGAGTGTCACCGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLWLDF*SVTVVQ
Trigger: TTGAACAACGGTGACACTTCAGAAATCCAGCCAGAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTATGTGACGTGTGTGTCTaGAAGGAGGGGGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLCDVCV*KEGAFN
Trigger: GTTGAAGGCCCCCTCCTTTCAGACACACACGTCACA...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTATGTTCTGCAGGTGGTTaGCAATGGCAGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLCSAGG*QWQPGW
Trigger: CCATCCTGGCTGCCATTGTCAACCACCTGCAGAACA...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTCCAGATGTGCTCCATaGCTTGCTTTATCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRSRCAP*LALSGH
Trigger: GTGACCGGATAAAGCAAGTCATGGAGCACATCTGGA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGATAGACTGGCTCCGGTaGTCTGGCCATTATACTCTG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRIDWLR*SGHYTL
Trigger: CAGAGTATAATGGCCAGATCACCGGAGCCAGTCTAT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGATAGACTGGCTCCGGTaGTCTGGCCATTATACTCTG +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGIDWLR*SGHYTL
Trigger: CAGAGTATAATGGCCAGATCACCGGAGCCAGTCTAT...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGGTTGCTACAATTTATaGGGAGAAAGACTATCACCC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCGCYNL*GERLSP
Trigger: GGGTGATAGTCTTTCTCCTCATAAATTGTAGCAACC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGCAAAGGAAAATGGAGTaGAGAAAATCACCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMQRKME*RKSPAN
Trigger: ATTTGCTGGTGATTTTCTTCACTCCATTTTCCTTTG...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTAAGCTGAAGGCTAAATaGCCCACTGTCTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLKLKAK*PTVSQK
Trigger: CTTTTGTGAGACAGTGGGTCATTTAGCCTTCAGCTT...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATTTTCTGTCCTGTCTaGTGGTCTGTGACAATCTTC +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCIFCPV*WSVTIF
Trigger: GAAGATTGTCACAGACCAGCAGACAGGACAGAAAAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGTGGTGAATATGAGTTaGTTGGCGCTGGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCVVNMS*LALDVS
Trigger: AGAGACATCCAGCGCCAAGCAACTCATATTCACCAC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGGTGGTGAATATGAGTTaGTTGGCGCTGGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQVVNMS*LALDVS
Trigger: AGAGACATCCAGCGCCAAGCAACTCATATTCACCAC...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATGAAAAGCAGACGGGATaGAGACTCACAGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: EIATIFGSQASLTQTVLNEKQTG*RLTDVV
Trigger: CACTACATCTGTGAGTCTGCATCCCGTCTGCTTTTC...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTATTGACCGAGCCCAGTaGATTGAGAGGAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCIDRAQ*IERKSR
Trigger: TCTGCTTTTCCTCTCAATGCACTGGGCTCGGTCAAT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTATCCAGCTTCGCCATaGTGTTACAGAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCYPASP*CYRTPA
Trigger: TGCAGGAGTTCTGTAACAGCATGGCGAAGCTGGATA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTTTCAATCTGGCTTGTaGTGGTCAAACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCFQSGL*WSNLDD
Trigger: ATCATCCAGGTTTGACCAGCACAAGCCAGATTGAAA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTGATTGTTCCAAAATCTaGTGCTTCATCAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFDCSKI*CFIKRH
Trigger: ATGCCTTTTGATGAAGCAGCAGATTTTGGAACAATC...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGCTACTCTCCAAAATTTaGTGCCAAGGCAAGAATTAT +
Preference number: 4 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMLLSKI*CQGKNY
Trigger: ATAATTCTTGCCTTGGCAGCAAATTTTGGAGAGTAG...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGCTGGTGTCCTAACTaGCTCAGAAGAGTCCACATT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGWCPN*LRRVHI
Trigger: AATGTGGACTCTTCTGAGGCAGTTAGGACACCAGCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGCAAGCCTGGGAAATTaGTACCATCTTTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCASLGN*YHLWES
Trigger: TGACTCCCAAAGATGGTAGCAATTTCCCAGGCTTGC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTACTGCGGTGACTATCTaGATTTTCTGTCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCTAVTI*IFCPVC
Trigger: GCAGACAGGACAGAAAATCCAGATAGTCACCGCAGT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGACTGCGGTGACTATCTaGATTTTCTGTCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQTAVTI*IFCPVC
Trigger: GCAGACAGGACAGAAAATCCAGATAGTCACCGCAGT...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGCTGGTCAAACCTaGATGATCGGGGCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRCAGQT*MIGAKE
Trigger: CTCTTTAGCCCCGATCATCCAGGTTTGACCAGCACA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCAATCTGGCTTGTGCTaGTCAAACCTGGATGATCGG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRQSGLC*SNLDDR
Trigger: CCGATCATCCAGGTTTGACCAGCACAAGCCAGATTG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTCAAGTGTCTGCTCTATaGCTAGAAGCTTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLQVSAL*LEASEL
Trigger: CAGTTCAGAAGCTTCTAGCCATAGAGCAGACACTTG...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCCACCTTGCACTTTTTaGTCACAAGGCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRPPCTF*SQGSIC
Trigger: GCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGTCCCTGGGAGAAAAGTaGCTGTCAGATGATGAGACT +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQSLGEK*LSDDET
Trigger: AGTCTCATCATCTGACAGCCACTTTTCTCCCAGGGA...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTAGATAAAGGAAGCACGTaGGGCATCTGCTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLDKGST*GICSAG
Trigger: GCCAGCAGAGCAGATGCCCCACGTGCTTCCTTTATC...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTTGCAACCTTCACAACTaGCAGCCCCATAGTGACGGC +
Preference number: 4 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCCNLHN*QPHSDG
Trigger: GCCGTCACTATGGGGCTGTCAGTTGTGAAGGTTGCA...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCTCTGGCTGGATTTCTaGAGTGTCACCGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRLWLDF*SVTVVQ
Trigger: TTGAACAACGGTGACACTTCAGAAATCCAGCCAGAG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGCCAGCCTCACAGTTATaGTGGAGCTGCAGAAACACG +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVPASQL*WSCRNT
Trigger: CGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGG...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTATCACCCTGGAAATTaGGGGTTGTTTTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAYHPGN*GLFLRS
Trigger: GCTCCTTAAAAACAACCCTCAATTTCCAGGGTGATA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAAAAAGACAAAGCAATTaGCCGGGTCTTCCACATGCC +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRKRQSN*PGLPHA
Trigger: GGCATGTGGAAGACCCGGTCAATTGCTTTGTCTTTT...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGAAATATTCCAGCACTTaGGTTGTGTGTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGKYSST*VVCGSS
Trigger: GCTGCTGCCACACACAACTCAAGTGCTGGAATATTT...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGATTTTCTGTCCTGTCTaGTGGTCTGTGACAATCTTC +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAIFCPV*WSVTIF
Trigger: GAAGATTGTCACAGACCAGCAGACAGGACAGAAAAT...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTTGAAGCAGCACAATTaGTTGGTTTCTCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLKQHN*LVSPVA
Trigger: TGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCAA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTAAGACCTGTTTGTCTTaGTCCATCTTTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCKTCLS*SIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTCACGTATCAAAGGCTaGTGGATGTTCACAAGCATC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCSRIKG*WMFTSI
Trigger: GATGCTTGTGAACATCCAGCAGCCTTTGATACGTGA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTATGTGCTCCATGACTTaGTTTATCCGGTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCMCSMT*FIRSPE
Trigger: TTCTGGTGACCGGATAAAGCAAGTCATGGAGCACAT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTGGCCATTATACTCTaGTGTCTCCATCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLAIIL*CLHLED
Trigger: ATCCTCAAGATGGAGACAGCAGAGTATAATGGCCAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAGGCAGGTGTGTGGTTTaGGCTATAGACTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: CPQRTMKVKALETARVLRGRCVV*AIDWLR
Trigger: CCGGAGCCAGTCTATAGCGCAAACCACACACCTGCC...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTTCTGTCCTGTCTGCTaGTCTGTGACAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCFCPVC*SVTIFS
Trigger: AGAGAAGATTGTCACAGACCAGCAGACAGGACAGAA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000617312.4
CDS-3UTR CCA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTAAGTTCCAGCTCCATCTaGGCTGGTCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLSSSSI*AGQDEL
Trigger: CAGTTCATCCTGACCAGCCCAGATGGAGCTGGAACT...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAAGCAGCACAATTGCTTaGTTTCTCCCGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRSSTIA*FLPLHI
Trigger: GATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCT...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCVHKHP*IKKTCL
Trigger: CAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAAC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCGTATCAAAGGCTGCTaGATGTTCACAAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRRIKGC*MFTSIP
Trigger: AGGGATGCTTGTGAACATCCAGCAGCCTTTGATACG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGCGTATCAAAGGCTGCTaGATGTTCACAAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGRIKGC*MFTSIP
Trigger: AGGGATGCTTGTGAACATCCAGCAGCCTTTGATACG...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGAAAGTTTATCTTCCTaGATGCTGTTCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCESLSS*MLFCRW
Trigger: CCACCTGCAGAACAGCATCCAGGAAGATAAACTTTC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCAAGCCCTGTGAAAGTTaGAGCCCAAATATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCKPCES*SPNIWF
Trigger: AAACCAAATATTTGGGCTCCAACTTTCACAGGGCTT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp TATTGGAAGTACTGTCAAGAGCTCAAAATGCCCACCTaGCACTTTTTGGTCACAAGGCTCCATCTGCCACGA +
Preference number: 4 (lower is better)
Translates to: YWKYCQELKMPT*HFLVTRLHLPR
Trigger: TCGTGGCAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAGCTCTTGACAGTACTTCCAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp GGAAACACTGTTCCCACTTACCCTACTAACACTGACTaGCGTAAAGTGCTGCTAACCCTTCAGGATCAAGCA +
Preference number: 4 (lower is better)
Translates to: GNTVPTYPTNTD*RKVLLTLQDQA
Trigger: TGCTTGATCCTGAAGGGTTAGCAGCACTTTACGCAAGTCAGTGTTAGTAGGGTAAGTGGGAACAGTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTTTGTTCAAAGATGTaGAAACACTCAATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLCSKM*KHSMGQ
Trigger: CTGGCCCATTGAGTGTTTTCACATCTTTGAACAAAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTCCTCACACTCCTTTTaGAGAAACCTTTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCSSHSF*RNLCNL
Trigger: AAGGTTGCAAAGGTTTCTTCAAAAGGAGTGTGAGGA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTCGGTAGGTGTCTTCTaGGTAGGTTTTCTGAACATA +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCSVGVF*VGFLNI
Trigger: TATGTTCAGAAAACCTACTCAGAAGACACCTACCGA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGCAACCTGACAGGAGATaGAATGGACCTGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVQPDRR*NGPAVR
Trigger: TCTGACTGCAGGTCCATTTCATCTCCTGTCAGGTTG...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTTCTTGACTTTGGGCTaGCTTTACTTAACCAACCTG +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCFLTLG*LYLTNL
Trigger: CAGGTTGGTTAAGTAAAGTCAGCCCAAAGTCAAGAA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGATGCTTCCCAGGTCTATaGGCAACTACTGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CPQRTMKVKALETARVLRCFPGL*ATTAGP
Trigger: TGGCCCAGCAGTAGTTGCTCATAGACCTGGGAAGCA...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGCTTCCGTTCACTCTaGACAGATTCCATTTTCATG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGFRSL*TDSIFM
Trigger: CATGAAAATGGAATCTGTGCAGAGTGAACGGAAGCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTCACGTATCAAAGGCTaGTGGATGTTCACAAGCATC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRSRIKG*WMFTSI
Trigger: GATGCTTGTGAACATCCAGCAGCCTTTGATACGTGA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTTTCAATCTGGCTTGTaGTGGTCAAACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCFQSGL*WSNLDD
Trigger: ATCATCCAGGTTTGACCAGCACAAGCCAGATTGAAA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp GCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTAACAGACTTCTGCAACTCCATCTGTaGCTTTTCTTGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: AHTWGNQSAQCAGNINRLLQLHL*LFLEFF
Trigger: GAAAAATTCCAAGAAAAGGCACAGATGGAGTTGCAG...AAGTCTGTTAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGATGTAGGGGATTATaGTGTCTATCGAAACATTGC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCGCRGL*CLSKHC
Trigger: GCAATGTTTCGATAGACAGCATAATCCCCTACATCC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATGGATGTAGGGGATTATaGTGTCTATCGAAACATTGC +
Preference number: 4 (lower is better)
Translates to: EIATIFGSQASLTQTVLNGCRGL*CLSKHC
Trigger: GCAATGTTTCGATAGACAGCATAATCCCCTACATCC...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCTGGCCATTATACTCTaGTGTCTCCATCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRLAIIL*CLHLED
Trigger: ATCCTCAAGATGGAGACAGCAGAGTATAATGGCCAG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAGGGGATGTTTTCACTTaGTGGAGGAACTGTACATCT +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRGDVFT*WRNCTS
Trigger: AGATGTACAGTTCCTCCAGCAAGTGAAAACATCCCC...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACGCTGGACATACGAAGTaGACGCTGGTGGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYAGHTK*TLVGGT
Trigger: TGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGC...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTGGAATTCTTCCTTTTaGAGAGTGGAGATTCTGACT +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAWNSSF*RVEILT
Trigger: AGTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGTTCTGTCCTGTCTGCTaGTCTGTGACAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGFCPVC*SVTIFS
Trigger: AGAGAAGATTGTCACAGACCAGCAGACAGGACAGAA...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRVHKHP*IKKTCL
Trigger: CAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAAC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTGTGCCCAGAGCTCCCTaGCTTGTTTCAGCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCVPRAP*LVSALE
Trigger: TTCTAAGGCTGAAACAAGCCAGGGAGCTCTGGGCAC...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTAAGATTCACTTAGGTTaGCAAGGGAGGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCKIHLG*QGRSLH
Trigger: ATGTAGTGACCTCCCTTGCCAACCTAAGTGAATCTT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAAAGACTATCACCCTaGAAATTGAGGGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSERLSP*KLRVVF
Trigger: AAAAACAACCCTCAATTTCCAGGGTGATAGTCTTTC...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTTCTTGCTGTAAACTCTaGTTGCTACAATTTATGAGG +
Preference number: 4 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSSCCKL*LLQFMR
Trigger: CCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGA...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTAAATGAGAGGAGGGGCTaGTGGAGACCTTTTCACCAA +
Preference number: 4 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLNERRG*WRPFHQ
Trigger: TTGGTGAAAAGGTCTCCACCAGCCCCTCCTCTCATT...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAAGGCGTCCACTGCGGTaGCTATCTGGATTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CPQRTMKVKALETARVLRRRPLR*LSGFSV
Trigger: GACAGAAAATCCAGATAGTCACCGCAGTGGACGCCT...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTCGGTAGGTGTCTTCTaGGTAGGTTTTCTGAACATA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRSVGVF*VGFLNI
Trigger: TATGTTCAGAAAACCTACTCAGAAGACACCTACCGA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR TCA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGCTTCACAAGCAGAAATaGAACAAACCTGCCCTAATT +
Preference number: 4 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQLHKQK*NKPALI
Trigger: AATTAGGGCAGGTTTGTTTCATTTCTGCTTGTGAAG...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTATGTGGCAGCAGCATTTaGGTCCATGAATGCTATGGT +
Preference number: 4 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLCGSSI*VHECYG
Trigger: ACCATAGCATTCATGGACTCAAATGCTGCTGCCACA...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCAGATTCCATTTTCATaGCCATCTCTAAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCQIPFS*PSLSIF
Trigger: AAAAATGCTTAGAGATGGGCATGAAAATGGAATCTG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGACTTGGTTTCTCCCGTTaGACATCGAAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: CPQRTMKVKALETARVLRLGFSR*TSKGFR
Trigger: ACGGAAGCCCTTCGATGTGCAACGGGAGAAACCAAG...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTGCAACTCCATCTGTaGCTTTTCTTGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLQLHL*LFLEFF
Trigger: GAAAAATTCCAAGAAAAGGCACAGATGGAGTTGCAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGATGTAGGGGATTATaGTGTCTATCGAAACATTGC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGCRGL*CLSKHC
Trigger: GCAATGTTTCGATAGACAGCATAATCCCCTACATCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGTGTCAGAACCTCTTCTaGCTGGAATTCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGCQNLF*LEFFLL
Trigger: CAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACA...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAGCGGCGGATGTGACTTaGGGATGTTTTCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: CPQRTMKVKALETARVLRAADVT*GCFHLL
Trigger: CAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGC...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGATTGGCAGTTAATGTCTaGCTAGTTGCAATCCAATTC +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRLAVNV*LVAIQF
Trigger: GAATTGGATTGCAACTAGTCAGACATTAACTGCCAA...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGGTCAGAGGCTTGAAATaGGTTAAAGCAGCAAGAATA +
Preference number: 4 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGVRGLK*VKAARI
Trigger: TATTCTTGCTGCTTTAACTCATTTCAAGCCTCTGAC...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGCTGCAGTCAGAGGCTTaGAATGAGTTAAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVLQSEA*NELKQQ
Trigger: TTGCTGCTTTAACTCATTTCAAGCCTCTGACTGCAG...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTCAAAAACAGGGAAGCTaGAGGCTAAATGACCCACTG +
Preference number: 4 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCQKQGS*RLNDPL
Trigger: CAGTGGGTCATTTAGCCTTCAGCTTCCCTGTTTTTG...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGTGCAGCTTCCAGATGTaGTCCATGACTTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVCSFQM*SMTCFI
Trigger: GATAAAGCAAGTCATGGAGCACATCTGGAAGCTGCA...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCTGCAACTCCATCTGTaGCTTTTCTTGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRLQLHL*LFLEFF
Trigger: GAAAAATTCCAAGAAAAGGCACAGATGGAGTTGCAG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGATTGTTCCAAAATCTaGTGCTTCATCAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCDCSKI*CFIKRH
Trigger: ATGCCTTTTGATGAAGCAGCAGATTTTGGAACAATC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR GCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACGGTTCTAGAGGAGTCTaGAGATGCCCATCAGAGACC +
Preference number: 4 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYGSRGV*RCPSET
Trigger: GGTCTCTGATGGGCATCTGCAGACTCCTCTAGAACC...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATCAAACAGGAAAAGCTTaGTATATATTCACATCCGTG +
Preference number: 4 (lower is better)
Translates to: EIATIFGSQASLTQTVLNQTGKA*YIFTSV
Trigger: CACGGATGTGAATATATAGCAAGCTTTTCCTGTTTG...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGGAATTTTTCAATCTaGCTTGTGCTGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRWNFSI*LVLVKP
Trigger: AGGTTTGACCAGCACAAGCCAGATTGAAAAATTCCA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGATGGAATTTTTCAATCTaGCTTGTGCTGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRWNFSI*LVLVKP
Trigger: AGGTTTGACCAGCACAAGCCAGATTGAAAAATTCCA...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGCAAGAATTTAGAAGTTaGAAACACTGTTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAQEFRS*KHCSHL
Trigger: TAAGTGGGAACAGTGTTTCCAACTTCTAAATTCTTG...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACGCCCAAAACAGTCCCTaGAATCAGCCATCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYAQNSP*NQPSPA
Trigger: TGCTGGTGATGGCTGATTCCAGGGACTGTTTTGGGC...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGCTGGCGATAGAAAGATaGGAATTACTATTTATTCAG +
Preference number: 4 (lower is better)
Translates to: EIRSQNMDVHMWHELLIALAIER*ELLFIQ
Trigger: CTGAATAAATAGTAATTCCCATCTTTCTATCGCCAG...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp CACAGTTTTCCATTTGCCCTGCCCACAGGCAAGATGTaGCTAACGTTACACATTGATAAGTGCTTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: HSFPFALPTGKM*LTLHIDKCLES
Trigger: ACTTTCTAAGCACTTATCAATGTGTAACGTTAGCAACATCTTGCCTGTGGGCAGGGCAAATGGAAAACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp AGAAAATCACCAGCAAATCTTCCCTGCCGAGGGACCTaGGAACACCCATATCAGTTTACATTAGCAACTTTA +
Preference number: 4 (lower is better)
Translates to: RKSPANLPCRGT*EHPYQFTLATL
Trigger: TAAAGTTGCTAATGTAAACTGATATGGGTGTTCCAAGGTCCCTCGGCAGGGAAGATTTGCTGGTGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp GATATTAAGATAAACTGTCTTCCAGCTTCCTGGCTCTaGTCCGAACCTAGAGAATATACGGAAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: DIKINCLPASWL*SEPREYTEMSP
Trigger: GGGTGACATTTCCGTATATTCTCTAGGTTCGGACAAGAGCCAGGAAGCTGGAAGACAGTTTATCTTAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TTGCTCCTTGCCGTAACTATCCCCCAAACAAGTAAGACAGCTAATAAGTATGTGAGGAAGAAATTGTCCTaGAACCTTCCATCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLLAVTIPQTSKTANKYVRKKLS*NLPSSF
Trigger: AAAGCTGGATGGAAGGTTTCAGGACAATTTCTTCCT...CACATACTTATTAGCTGTCTTACTTGTTTGGGGGATAGTTACGGCAAGGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGATTGTTCCAAAATCTaGTGCTTCATCAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRDCSKI*CFIKRH
Trigger: ATGCCTTTTGATGAAGCAGCAGATTTTGGAACAATC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
3UTR CAA 72 bp ACAGCTAATAAGTATGTGTGTAGCGTGGATATTGCCTaGAGATTAAGGAGCCTAACGCATCCACTGTTAACA +
Preference number: 4 (lower is better)
Translates to: TANKYVCSVDIA*RLRSLTHPLLT
Trigger: TGTTAACAGTGGATGCGTTAGGCTCCTTAATCTCAAGGCAATATCCACGCTACACACATACTTATTAGCTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGAGATTATGTGAGTTTTTaGAGCAATCTAGTGATTCCT +
Preference number: 4 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRDYVSF*SNLVIP
Trigger: AGGAATCACTAGATTGCTGCAAAAACTCACATAATC...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGAGACTTCCTATGACCTaGACTAAGAAAAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRRLPMT*TKKRVK
Trigger: TTTAACTCTTTTCTTAGTCCAGGTCATAGGAAGTCT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR TCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTTCTCACAAAAGGCACTaGGTACTATGGTCTCATAAA +
Preference number: 4 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCSHKRH*VLWSHK
Trigger: TTTATGAGACCATAGTACTCAGTGCCTTTTGTGAGA...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACTTGAAGCAGCACAATTaGTTGGTTTCTCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYLKQHN*LVSPVA
Trigger: TGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCAA...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTCAACTCCACAACATGTaGACACAATTAGGAATGATG +
Preference number: 4 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCQLHNM*TQLGMM
Trigger: CATCATTCCTAATTGTGTGCACATGTTGTGGAGTTG...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACGAGATGAAATGGACCTaGAGTCAGAGGCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYEMKWT*SQRLEM
Trigger: CATTTCAAGCCTCTGACTGCAGGTCCATTTCATCTC...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
3UTR CAA 72 bp CTTTTAAGCGCATACTGTTCTTGCTGTAAACTCTGGTaGCTACAATTTATGAGGAGAAAGACTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: LLSAYCSCCKLW*LQFMRRKTITL
Trigger: CAGGGTGATAGTCTTTCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCAAGAACAGTATGCGCTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR GCA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTACAGATTCCATTTTCATaGCCATCTCTAAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLQIPFS*PSLSIF
Trigger: AAAAATGCTTAGAGATGGGCATGAAAATGGAATCTG...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACACCAACACCAAGAACTaGGATCTGAAAGCTGTTATG +
Preference number: 4 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYTNTKN*DLKAVM
Trigger: CATAACAGCTTTCAGATCCCAGTTCTTGGTGTTGGT...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CCA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGACAAACCACAGCCTTATaGCAAGGGTTAGACAATAAA +
Preference number: 4 (lower is better)
Translates to: CPQRTMKVKALETARVLRQTTAL*QGLDNK
Trigger: TTTATTGTCTAACCCTTGCCATAAGGCTGTGGTTTG...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS CCA 90 bp CGGCCGGAGGCTTTGTCGCCACAGACCACACAGTACTCTACCACCTaGGGCCGCTGGACGTCCGTCTTCCCCAGTAAACGCTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: RPEALSPQTTQYSTT*GRWTSVFPSKRSTE
Trigger: CTCTGTGGAGCGTTTACTGGGGAAGACGGACGTCCAGCGGCCCCAGGTGGTAGAGTACTGTGTGGTCTGTGGCGACAAAGCCTCCGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS GCA 90 bp TGCGCTGAGGTGAGGCTACAGCAGAGTCGGTGGAGATTATCTGGATaGGTGGGGAGGGGCTGGTCATCCCTGGAGATTCCGGCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: CAEVRLQQSRWRLSG*VGRGWSSLEIPAER
Trigger: CCTCTCGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGACTCTGCTGTAGCCTCACCTCAGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000413118.5
ENST00000425241.5
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
CDS CCA 90 bp ACAATGGCAGCCAGGATGGTGGAGAGACTCATGACCTGGGCACACTaGGCCAGGCCGAGGGTGAAGAGCTCATTCCAGCAGGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: TMAARMVERLMTWAH*ARPRVKSSFQQART
Trigger: TGTGCGGGCCTGCTGGAATGAGCTCTTCACCCTCGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCATCCTGGCTGCCATTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413194.1
ENST00000425241.5
ENST00000439011.5
ENST00000475707.5
ENST00000478572.1
ENST00000495282.1
ENST00000617312.4
CDS CCA 90 bp GCTTTGTCGCCACAGACCACACAGTACTCTACCACCTGGGGCCGCTaGACGTCCGTCTTCCCCAGTAAACGCTCCACAGAGGCAGAATCC +
Preference number: 5 (lower is better)
Translates to: ALSPQTTQYSTTWGR*TSVFPSKRSTEAES
Trigger: GGATTCTGCCTCTGTGGAGCGTTTACTGGGGAAGACGGACGTCCAGCGGCCCCAGGTGGTAGAGTACTGTGTGGTCTGTGGCGACAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 90 bp GTCGGTGGAGATTATCTGGATGCGTGGGGAGGGGCTGGTCATCCCTaGAGATTCCGGCCGAGAGGTCTGTGTACGTGTTACCTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: VGGDYLDAWGGAGHP*RFRPRGLCTCYLSH
Trigger: GTGGCTGAGGTAACACGTACACAGACCTCTCGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393102.7
ENST00000437120.5
CDS GCA 90 bp ATCACCTTCCCAGTTCCAGCTCCATCTGGGCTGGTCAGGATGAACTaGTGTTTGGGGGATCCGGAGGCGTCCACTGCGGTGACTATCTGG +
Preference number: 5 (lower is better)
Translates to: ITFPVPAPSGLVRMN*CLGDPEASTAVTIW
Trigger: CCAGATAGTCACCGCAGTGGACGCCTCCGGATCCCCCAAACAGCAGTTCATCCTGACCAGCCCAGATGGAGCTGGAACTGGGAAGGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413118.5
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS TCA 90 bp ACTCAATGGGCCAGAGGCAGGTTCAGAGCCCTGAATGCGCTGAGGTaGGGCTACAGCAGAGTCGGTGGAGATTATCTGGATGCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TQWARGRFRALNALR*GYSRVGGDYLDAWG
Trigger: TCCCCACGCATCCAGATAATCTCCACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAGGGCTCTGAACCTGCCTCTGGCCCATTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 90 bp GTCGGTGGAGATTATCTGGATGCGTGGGGAGGGGCTGGTCATCCCTaGAGATTCCGGCCGAGAGGTCTGTGTACGTGTTACCTCAGGATT +
Preference number: 5 (lower is better)
Translates to: VGGDYLDAWGGAGHP*RFRPRGLCTCYLRI
Trigger: AATCCTGAGGTAACACGTACACAGACCTCTCGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000413118.5
ENST00000425241.5
CDS CCA 90 bp CTACAGCAGAGTCGGTGGAGATTATCTGGATGCGTGGGGAGGGGCTaGTCATCCCTGGAGATTCCGGCCGAGAGGTCTGTGTACGTGTTA +
Preference number: 5 (lower is better)
Translates to: LQQSRWRLSGCVGRG*SSLEIPAERSVYVL
Trigger: TAACACGTACACAGACCTCTCGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGACTCTGCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000413118.5
ENST00000425241.5
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
CDS-3UTR CAA 90 bp CTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTCACTTGCTGGAGGAACTGGCTTGGTTTCTCCCGTaGCACATCGAAGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: LPRAADVTWGCFHLLEELAWFLP*HIEGLP
Trigger: CGGAAGCCCTTCGATGTGCAACGGGAGAAACCAAGC...CAGTTCCTCCAGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACTCCCATCTGCCAAGCTaGGAGAAGAGGAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHSHLPS*EKRSCL
Trigger: CAGACAGCTCCTCTTCTCCAAGCTTGGCAGATGGGA...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACCCTGGAAGGATTCTGTaGCTCCTTGGCAGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHPGRIL*LLGRCV
Trigger: CACACACCTGCCAAGGAGCAACAGAATCCTTCCAGG...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS GCA 90 bp TGGATCCTGCCAGGGACGAGGTTGTCTGAGGTGGTGAATATGAGTTaGTTGGCGCTGGATGTCTCTGGGGAAGCCAGGATCACCTTCCCA +
Preference number: 5 (lower is better)
Translates to: WILPGTRLSEVVNMS*LALDVSGEARITFP
Trigger: TGGGAAGGTGATCCTGGCTTCCCCAGAGACATCCAGCGCCAAGCAACTCATATTCACCACCTCAGACAACCTCGTCCCTGGCAGGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS-3UTR CAA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTGGGAGGTCACTACATTaGCCAGTGTGCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: PAPIQPHSYDGAAETRALGRSLH*PVCPEL
Trigger: GAGCTCTGGGCACACTGGCAAATGTAGTGACCTCCC...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACAGCGGCGGATGTGACTaGGGGATGTTTTCACTTGCT +
Preference number: 5 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHSGGCD*GMFSLA
Trigger: AGCAAGTGAAAACATCCCCAAGTCACATCCGCCGCT...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGACAGTGCCCCACATCTaGCTGACTGAGCACAGCGCA +
Preference number: 5 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMTVPHI*LTEHSA
Trigger: TGCGCTGTGCTCAGTCAGCAAGATGTGGGGCACTGT...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS TCA 90 bp GGCAGAATCCGTGACAATCTGGATCCTGCCAGGGACGAGGTTGTCTaGGGTGGTGAATATGAGTTGCTTGGCGCTGGATGTCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GRIRDNLDPARDEVV*GGEYELLGAGCLWG
Trigger: TCCCCAGAGACATCCAGCGCCAAGCAACTCATATTCACCACCTCAGACAACCTCGTCCCTGGCAGGATCCAGATTGTCACGGATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 90 bp GTCGGTGGAGATTATCTGGATGCGTGGGGAGGGGCTGGTCATCCCTaGAGATTCCGGCCGAGAGGTCTGTGTACGTGTTACCTTTATTAC +
Preference number: 5 (lower is better)
Translates to: VGGDYLDAWGGAGHP*RFRPRGLCTCYLYY
Trigger: GTAATAAAGGTAACACGTACACAGACCTCTCGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS-3UTR CAA 90 bp GTCGGCTGGCACACACCTGGGGGAACCAAAGTGCACAGTGTGCTGGTAACATTACCCGAGTTATCTCACTaGCAGACTGGTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VGWHTPGGTKVHSVLVTLPELSH*QTGPLA
Trigger: AGCCAGAGGACCAGTCTGCAAGTGAGATAACTCGGG...TAATGTTACCAGCACACTGTGCACTTTGGTTCCCCCAGGTGTGTGCCAGCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTGGATTCTGTTGCTCCTaGGCAGGTGTGTGGTTTGCG +
Preference number: 5 (lower is better)
Translates to: SRQAMTGKGRTILWDEASGFCCS*AGVWFA
Trigger: CGCAAACCACACACCTGCCAAGGAGCAACAGAATCC...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGTGTTACCTCAGGATTaGGCGCCAAAGCGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCVLPQD*APKRPR
Trigger: TCGAGGCCGCTTTGGCGCCAAATCCTGAGGTAACAC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323373.10
ENST00000425241.5
CDS-3UTR CAA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTCCTGAAAGGCTGGGATaGACCGAGCCCAGTGCATTG +
Preference number: 5 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSPERLG*TEPSAL
Trigger: CAATGCACTGGGCTCGGTCAATCCCAGCCTTTCAGG...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCGCACAAGGCTGGTGTaGCAGTCCTGCCCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCRTRLV*QSCPSA
Trigger: GGCACTTGGGCAGGACTGCAACACCAGCCTTGTGCG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTAGGATGAACTGCTGTTaGGGGGATCCGGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCRMNCC*GDPEAS
Trigger: GGACGCCTCCGGATCCCCCAAACAGCAGTTCATCCT...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCTGCCAGGGACGAGGTaGTCTGAGGTGGTGAATATG +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCLPGTR*SEVVNM
Trigger: CATATTCACCACCTCAGACAACCTCGTCCCTGGCAG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTCCCATCTGCCAAGCTaGGAGAAGAGGAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCSHLPS*EKRSCL
Trigger: CAGACAGCTCCTCTTCTCCAAGCTTGGCAGATGGGA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGGATTCTGTTGCTCCTaGGCAGGTGTGTGGTTTGCG +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCGFCCS*AGVWFA
Trigger: CGCAAACCACACACCTGCCAAGGAGCAACAGAATCC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCCTGGAAGGATTCTGTaGCTCCTTGGCAGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCPGRIL*LLGRCV
Trigger: CACACACCTGCCAAGGAGCAACAGAATCCTTCCAGG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AGGGACCCAGGGCTGGACATACGAAGTGCACGCTGGTGGGAGGCACACAATGAGGTAACATTAACAGACTaGCCAACAGAGATGCTGAGT +
Preference number: 5 (lower is better)
Translates to: RDPGLDIRSARWWEAHNEVTLTD*PTEMLS
Trigger: ACTCAGCATCTCTGTTGGCAAGTCTGTTAATGTTAC...CTCATTGTGTGCCTCCCACCAGCGTGCACTTCGTATGTCCAGCCCTGGGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTAAAGGTCGCACAATCTaGTGGGATGAGGCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFKGRTI*WDEASE
Trigger: TTCACTGGCCTCATCCCACAAGATTGTGCGACCTTT...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS GCA 90 bp GCTGATGACGTGGATGCTCCCTCCTCCACTGGTGTCTATCCCATCTaGCAAGCTTGGAGAAGAGGAGCTGTCTGTGGTATTAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: ADDVDAPSSTGVYPI*QAWRRGAVCGIKCF
Trigger: AAAGCACTTAATACCACAGACAGCTCCTCTTCTCCAAGCTTGGCAGATGGGATAGACACCAGTGGAGGAGGGAGCATCCACGTCATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS GCA 90 bp AAGATTCACTTAGGTTGGCAAGGGAGGTCACTACATTTGCCAGTGTaGCCAGAGCTCCCTGGCTTGTTTCAGCCTGCAATCCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: KIHLGWQGRSLHLPV*PELPGLFQPAIPAT
Trigger: AGTAGCTGGGATTGCAGGCTGAAACAAGCCAGGGAGCTCTGGGCACACTGGCAAATGTAGTGACCTCCCTTGCCAACCTAAGTGAATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478572.1
CDS CCA 90 bp AACTGCTGTTTGGGGGATCCGGAGGCGTCCACTGCGGTGACTATCTaGATTTTCTGTCCTGTCTGCTGGTCTGTGACAATCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: NCCLGDPEASTAVTI*IFCPVCWSVTIFSL
Trigger: CAAAGAGAAGATTGTCACAGACCAGCAGACAGGACAGAAAATCCAGATAGTCACCGCAGTGGACGCCTCCGGATCCCCCAAACAGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323373.10
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS-3UTR CAA 90 bp GGGGCATTTGGAGTGGAAAGCCCTGGGAAGGTAACGCTCACACTCCAAGGCCACTTCCTCACACTCCTTTaGAAGAAACCTTTGCAACCT +
Preference number: 5 (lower is better)
Translates to: GAFGVESPGKVTLTLQGHFLTLL*KKPLQP
Trigger: AGGTTGCAAAGGTTTCTTCAAAAGGAGTGTGAGGAA...GTGGCCTTGGAGTGTGAGCGTTACCTTCCCAGGGCTTTCCACTCCAAATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGCTTGGTTTCTCCCGTaGCACATCGAAGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCAWFLP*HIEGLP
Trigger: CGGAAGCCCTTCGATGTGCAACGGGAGAAACCAAGC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTGAAGACCTGTTTGTCTaGCTCCATCTTTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SRQAMTGKGRTILWDEASEDLFV*LHLCLP
Trigger: TGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTC...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGGAGGTCACTACATTaGCCAGTGTGCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCGRSLH*PVCPEL
Trigger: GAGCTCTGGGCACACTGGCAAATGTAGTGACCTCCC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTTGGGGATGTTTTCACTaGCTGGAGGAACTGTACATC +
Preference number: 5 (lower is better)
Translates to: SRQAMTGKGRTILWDEASWGCFH*LEELYI
Trigger: GATGTACAGTTCCTCCAGCAAGTGAAAACATCCCCA...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS TCA 90 bp ACCAAAGCCAATGTCCTCGTTGTGATACTGTACCGTAGGTATGTATaGCATAACCACTGGGAGGACCTGGGCGAAGGCTATGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: TKANVLVVILYRRYV*HNHWEDLGEGYVGA
Trigger: AGCTCCCACATAGCCTTCGCCCAGGTCCTCCCAGTGGTTATGTCATACATACCTACGGTACAGTATCACAACGAGGACATTGGCTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478572.1
CDS CCA 90 bp CTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTaGCAGGTGTGTGGTTTGCGCTATAGACTGGCTCCGGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: LFFVCERSWKDSVAP*QVCGLRYRLAPVIW
Trigger: CCAGATCACCGGAGCCAGTCTATAGCGCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CCA 90 bp GAAAGGAGTCTGAGTGTGGTGTGTGTTGGCATTTCTCCAAGGTTGTaGGGCATCCAGGCACTAAGTCCCAGCATTTCCCAAACAGGTGAA +
Preference number: 5 (lower is better)
Translates to: ERSLSVVCVGISPRL*GIQALSPSISQTGE
Trigger: TTCACCTGTTTGGGAAATGCTGGGACTTAGTGCCTGGATGCCCCACAACCTTGGAGAAATGCCAACACACACCACACTCAGACTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495282.1
CDS-3UTR CAA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGGGTGGTGAATATGAGTaGCTTGGCGCTGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: EIRSQNMDVHMWHELLIAGGEYE*LGAGCL
Trigger: GAGACATCCAGCGCCAAGCAACTCATATTCACCACC...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTGCCAGGGACGAGGTaGTCTGAGGTGGTGAATATG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLPGTR*SEVVNM
Trigger: CATATTCACCACCTCAGACAACCTCGTCCCTGGCAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATTGATGATGCAGTCTaGGTTGCTCCGGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCIDDAV*VAPAAV
Trigger: TACAGCTGCCGGAGCAACCAAGACTGCATCATCAAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGTTGAAGCAGCACAATaGCTTGGTTTCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCVEAAQ*LGFSRC
Trigger: GCAACGGGAGAAACCAAGCAATTGTGCTGCTTCAAC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGGAGGTCACTACATTaGCCAGTGTGCCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGRSLH*PVCPEL
Trigger: GAGCTCTGGGCACACTGGCAAATGTAGTGACCTCCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCCCGAGTTATCTCACTaGCAGACTGGTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCPELSH*QTGPLA
Trigger: AGCCAGAGGACCAGTCTGCAAGTGAGATAACTCGGG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTCCCATCTGCCAAGCTaGGAGAAGAGGAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCSHLPS*EKRSCL
Trigger: CAGACAGCTCCTCTTCTCCAAGCTTGGCAGATGGGA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCCTGAAAGGCTGGGATaGACCGAGCCCAGTGCATTG +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRPERLG*TEPSAL
Trigger: CAATGCACTGGGCTCGGTCAATCCCAGCCTTTCAGG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGGCAGGTGTGTGGTTaGCGCTATAGACTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRWQVCG*RYRLAP
Trigger: CGGAGCCAGTCTATAGCGCAAACCACACACCTGCCA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGATGGCAGGTGTGTGGTTaGCGCTATAGACTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRWQVCG*RYRLAP
Trigger: CGGAGCCAGTCTATAGCGCAAACCACACACCTGCCA...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCCTGGAAGGATTCTGTaGCTCCTTGGCAGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCPGRIL*LLGRCV
Trigger: CACACACCTGCCAAGGAGCAACAGAATCCTTCCAGG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCCCAGCTTCCTGGCTCTaGTCCGAACCTAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCPASWL*SEPREY
Trigger: ATATTCTCTAGGTTCGGACAAGAGCCAGGAAGCTGG...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS TCA 90 bp TTGAGAGAACAGTTAATAAGGGGAGTGAGGCCAGCCCAGGCATCGTaGTTGCTGCCTCTTCATCTCCTGCGAACATACCTTTTAGCATGC +
Preference number: 5 (lower is better)
Translates to: LREQLIRGVRPAQAS*LLPLHLLRTYLLAC
Trigger: GCATGCTAAAAGGTATGTTCGCAGGAGATGAAGAGGCAGCAATCACGATGCCTGGGCTGGCCTCACTCCCCTTATTAACTGTTCTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS GCA 90 bp GAATCCGTGGCCAGGAGAACTGTACCATCCTCACGTATCAAAGGCTaGTGGATGTTCACAAGCATCCCTGGATCAAGAAGACCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: ESVARRTVPSSRIKG*WMFTSIPGSRRPVC
Trigger: ACAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAACATCCAGCAGCCTTTGATACGTGAGGATGGTACAGTTCTCCTGGCCACGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 90 bp GCTGGATTTCTGAAGTGTCACCGTTGTTCAAAGATTCACTTAGGTTaGCAAGGGAGGTCACTACATTTGCCAGTGTGCCCAGAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: AGFLKCHRCSKIHLG*QGRSLHLPVCPELP
Trigger: AGGGAGCTCTGGGCACACTGGCAAATGTAGTGACCTCCCTTGCCAACCTAAGTGAATCTTTGAACAACGGTGACACTTCAGAAATCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGTGAATATGAGTTGCTaGGCGCTGGATGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCVNMSC*ALDVSG
Trigger: CCCAGAGACATCCAGCGCCAAGCAACTCATATTCAC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTGGTGAATATGAGTaGCTTGGCGCTGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCGGEYE*LGAGCL
Trigger: GAGACATCCAGCGCCAAGCAACTCATATTCACCACC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGACTGCCAGGGACGAGGTaGTCTGAGGTGGTGAATATG +
Preference number: 5 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRLPGTR*SEVVNM
Trigger: CATATTCACCACCTCAGACAACCTCGTCCCTGGCAG...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCGAAGACCTGTTTGTCTaGCTCCATCTTTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCEDLFV*LHLCLP
Trigger: TGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTC...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCCCGAGTTATCTCACTaGCAGACTGGTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRPELSH*QTGPLA
Trigger: AGCCAGAGGACCAGTCTGCAAGTGAGATAACTCGGG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGATTCTGTTGCTCCTaGGCAGGTGTGTGGTTTGCG +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGFCCS*AGVWFA
Trigger: CGCAAACCACACACCTGCCAAGGAGCAACAGAATCC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTTACCACTACTTTTCTTaGTATGTGAACGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFYHYFS*YVNGPG
Trigger: TCCAGGACCGTTCACATACAAAGAAAAGTAGTGGTA...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGCCCTGCCGAGGGACCTaGGAACACCCATATCAGTTT +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRPCRGT*EHPYQF
Trigger: AAACTGATATGGGTGTTCCAAGGTCCCTCGGCAGGG...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS CCA 90 bp ACCATCCTCACGTATCAAAGGCTGCTGGATGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTGTCTTGCTCCATCTTTGTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: TILTYQRLLDVHKHP*IKKTCLSCSIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAACATCCAGCAGCCTTTGATACGTGAGGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTAGGATGAACTGCTGTTaGGGGGATCCGGAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCRMNCC*GDPEAS
Trigger: GGACGCCTCCGGATCCCCCAAACAGCAGTTCATCCT...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGGTGAATATGAGTTGCTaGGCGCTGGATGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGVNMSC*ALDVSG
Trigger: CCCAGAGACATCCAGCGCCAAGCAACTCATATTCAC...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGGTGGTGAATATGAGTaGCTTGGCGCTGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRGGEYE*LGAGCL
Trigger: GAGACATCCAGCGCCAAGCAACTCATATTCACCACC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp GAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTGAATATTGATGATGCAGTCTaGGTTGCTCCGGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: EIATIFGSQASLTQTVLNIDDAV*VAPAAV
Trigger: TACAGCTGCCGGAGCAACCAAGACTGCATCATCAAT...ATTCAGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGTTGAAGCAGCACAATaGCTTGGTTTCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCVEAAQ*LGFSRC
Trigger: GCAACGGGAGAAACCAAGCAATTGTGCTGCTTCAAC...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCAGTTCTTCTGTTATGTaGGAGCTCATCAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCSSSVM*ELISLS
Trigger: ACTCAGGCTGATGAGCTCCAACATAACAGAAGAACT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTTTTCAAGGGGGCATTaGGAGTGGAAAGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRFSRGH*EWKALG
Trigger: TCCCAGGGCTTTCCACTCCAAATGCCCCCTTGAAAA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp CCAGCCCCAATCCAGCCTCACAGTTATGATGGAGCTGCAGAAACACGAGCCCTTCTGGACGAGGAAAATTaGGTATCTGTAGCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: PAPIQPHSYDGAAETRALLDEEN*VSVAFK
Trigger: CTTAAAAGCTACAGATACCAAATTTTCCTCGTCCAG...AAGGGCTCGTGTTTCTGCAGCTCCATCATAACTGTGAGGCTGGATTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTGGTCACAAGGCTCCATCTGCCACGAGCGGCGGATGTGACTTGGGGATGTTTTGGATTATGTGAGTTTTaGCAGCAATCTAGTGATTCC +
Preference number: 5 (lower is better)
Translates to: LVTRLHLPRAADVTWGCFGLCEF*QQSSDS
Trigger: GGAATCACTAGATTGCTGCAAAAACTCACATAATCC...AAAACATCCCCAAGTCACATCCGCCGCTCGTGGCAGATGGAGCCTTGTGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCAAAATATTCCAGCACTaGAGTTGTGTGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCKIFQH*SCVWQQ
Trigger: CTGCTGCCACACACAACTCAAGTGCTGGAATATTTT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TCACGACAGGCTATGACGGGGAAAGGTCGCACAATCTTGTGGGATGAGGCCAGTGGTAAAAACTACGGCTaGTACTGTGAAAAATGTGCA +
Preference number: 5 (lower is better)
Translates to: SRQAMTGKGRTILWDEASGKNYG*YCEKCA
Trigger: TGCACATTTTTCACAGTACAAGCCGTAGTTTTTACC...ACTGGCCTCATCCCACAAGATTGTGCGACCTTTCCCCGTCATAGCCTGTCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTTCCTCACACTCCTTTaGAAGAAACCTTTGCAACCT +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCFLTLL*KKPLQP
Trigger: AGGTTGCAAAGGTTTCTTCAAAAGGAGTGTGAGGAA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGATTGATGATGCAGTCTaGGTTGCTCCGGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRIDDAV*VAPAAV
Trigger: TACAGCTGCCGGAGCAACCAAGACTGCATCATCAAT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGTTGAAGCAGCACAATaGCTTGGTTTCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRVEAAQ*LGFSRC
Trigger: GCAACGGGAGAAACCAAGCAATTGTGCTGCTTCAAC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCTCTGAAGTGTCACCGTaGTTCAAAGATTCACTTAGG +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCSEVSP*FKDSLR
Trigger: CCTAAGTGAATCTTTGAACAACGGTGACACTTCAGA...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACCGCACAAGGCTGGTGTaGCAGTCCTGCCCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYRTRLV*QSCPSA
Trigger: GGCACTTGGGCAGGACTGCAACACCAGCCTTGTGCG...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGATGTGCTCCATGACTaGCTTTATCCGGTCACCAGA +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRDVLHD*LYPVTR
Trigger: TCTGGTGACCGGATAAAGCAAGTCATGGAGCACATC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTTGCATTTTTCAATCTGGCTaGTGCTGGTCAAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: YVNGPGRILLLLGRCVVCIFQSG*CWSNLD
Trigger: ATCCAGGTTTGACCAGCACAAGCCAGATTGAAAAAT...GCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGTACACAGTTTTCCATTaGCCCTGCCCACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGYTVFH*PCPQAR
Trigger: TCTTGCCTGTGGGCAGGGCAAATGGAAAACTGTGTA...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCTCAAAATGCCCACCTaGCACTTTTTGGTCACAAGG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLKMPT*HFLVTR
Trigger: CCTTGTGACCAAAAAGTGCAAGGTGGGCATTTTGAG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp GCTTCTGAACTGGGTCACCACCGACTGTGCTACCACACTCCCACTTACTGCATGTCAAACAGGAAAAGCTaGCTATATATTCACATCCGT +
Preference number: 5 (lower is better)
Translates to: ASELGHHRLCYHTPTYCMSNRKS*LYIHIR
Trigger: ACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGA...CATGCAGTAAGTGGGAGTGTGGTAGCACAGTCGGTGGTGACCCAGTTCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGAAGCAGCACAATTGCTaGGTTTCTCCCGTTGCACAT +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRKQHNC*VSPVAH
Trigger: ATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGGCACCCCCAATTGTATaGGAAGTACTGTCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRAPPIV*EVLSRA
Trigger: AGCTCTTGACAGTACTTCCAATACAATTGGGGGTGC...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGAGCGTGGATATTGCCTaGAGATTAAGGAGCCTAACG +
Preference number: 5 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGSVDIA*RLRSLT
Trigger: CGTTAGGCTCCTTAATCTCAAGGCAATATCCACGCT...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS TCA 90 bp GACAAAACCATAGAGTCAGAAAGCAGATTAGTGGTTGGTAGGGTTTaGGAAGAGGGGGAAAGGAGGAGTGACTACATAATAGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: DKTIESESRLVVGRV*EEGERRSDYIIGFG
Trigger: CCCAAACCCTATTATGTAGTCACTCCTCCTTTCCCCCTCTTCTCAAACCCTACCAACCACTAATCTGCTTTCTGACTCTATGGTTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478572.1
CDS TCA 90 bp GTTGTGGGGCATCCAGGCACTAAGTCCCAGCATTTCCCAAACAGGTaGATTCAGCAAGTGTTTATTGAAGTGCTATCCAGGATCATTCTT +
Preference number: 5 (lower is better)
Translates to: VVGHPGTKSQHFPNR*IQQVFIEVLSRIIL
Trigger: AAGAATGATCCTGGATAGCACTTCAATAAACACTTGCTGAATTCACCTGTTTGGGAAATGCTGGGACTTAGTGCCTGGATGCCCCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495282.1
CDS GCA 90 bp ATTGCTGCCTCTTCATCTCCTGCGAACATACCTTTTAGCATGCTCTaGAGTGCTATACACAGTCTGTGGGCAAACAAGTGGAACTTCAAT +
Preference number: 5 (lower is better)
Translates to: IAASSSPANIPFSML*SAIHSLWANKWNFN
Trigger: ATTGAAGTTCCACTTGTTTGCCCACAGACTGTGTATAGCACTGCAGAGCATGCTAAAAGGTATGTTCGCAGGAGATGAAGAGGCAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS CCA 90 bp GTATCAAATGCCCGAGTTATCTCACTTGCAGACTGGTCCTCTGGCTaGATTTCTGAAGTGTCACCGTTGTTCAAAGATTCACTTAGGTTG +
Preference number: 5 (lower is better)
Translates to: VSNARVISLADWSSG*ISEVSPLFKDSLRL
Trigger: CAACCTAAGTGAATCTTTGAACAACGGTGACACTTCAGAAATCCAGCCAGAGGACCAGTCTGCAAGTGAGATAACTCGGGCATTTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS-3UTR CAA 90 bp CTGGGAAATTGCTACCATCTTTGGGAGTCAGGCCTCACTGACACAGACCGTTCTTATAGATTTTCTCAGTaGAAGCAGCACAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: LGNCYHLWESGLTDTDRSYRFSQ*KQHNCL
Trigger: CAAGCAATTGTGCTGCTTCAACTGAGAAAATCTATA...AGAACGGTCTGTGTCAGTGAGGCCTGACTCCCAAAGATGGTAGCAATTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp ACGGAAATGTCACCCTGTCAGAACCTCTTCTGCCTGGAATTCTTCCTTTTGCAGATCAAGAAGACCTGTTaGTCTTGCTCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: TEMSPCQNLFCLEFFLLQIKKTC*SCSIFV
Trigger: GACAAAGATGGAGCAAGACAAACAGGTCTTCTTGAT...CTGCAAAAGGAAGAATTCCAGGCAGAAGAGGTTCTGACAGGGTGACATTTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTCTGAAGTGTCACCGTaGTTCAAAGATTCACTTAGG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCSEVSP*FKDSLR
Trigger: CCTAAGTGAATCTTTGAACAACGGTGACACTTCAGA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTAGATGTGCTCCATGACTaGCTTTATCCGGTCACCAGA +
Preference number: 5 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLDVLHD*LYPVTR
Trigger: TCTGGTGACCGGATAAAGCAAGTCATGGAGCACATC...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTACCACTACTTTTCTTaGTATGTGAACGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCYHYFS*YVNGPG
Trigger: TCCAGGACCGTTCACATACAAAGAAAAGTAGTGGTA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp ATTCATTCAGTCTTACAGCCTAGAAACCTGTACACGCACAATGCTGCTGAAGGGCCCACAGGCAAGATGTaGCTAACGTTACACATTGAT +
Preference number: 5 (lower is better)
Translates to: IHSVLQPRNLYTHNAAEGPTGKM*LTLHID
Trigger: ATCAATGTGTAACGTTAGCAACATCTTGCCTGTGGG...CCCTTCAGCAGCATTGTGCGTGTACAGGTTTCTAGGCTGTAAGACTGAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTCCCACCTTGCACTTTTaGGTCACAAGGCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCPTLHF*VTRLHL
Trigger: CAGATGGAGCCTTGTGACCAAAAAGTGCAAGGTGGG...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS CCA 90 bp GCGAACATACCTTTTAGCATGCTCTGCAGTGCTATACACAGTCTGTaGGCAAACAAGTGGAACTTCAATGTGTACTGGATTATATGCGCT +
Preference number: 5 (lower is better)
Translates to: ANIPFSMLCSAIHSL*ANKWNFNVYWIICA
Trigger: AGCGCATATAATCCAGTACACATTGAAGTTCCACTTGTTTGCCCACAGACTGTGTATAGCACTGCAGAGCATGCTAAAAGGTATGTTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTTCCTCACACTCCTTTaGAAGAAACCTTTGCAACCT +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRFLTLL*KKPLQP
Trigger: AGGTTGCAAAGGTTTCTTCAAAAGGAGTGTGAGGAA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTAAAGCAGCACAATTGCTaGGTTTCTCCCGTTGCACAT +
Preference number: 5 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLKQHNC*VSPVAH
Trigger: ATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTT...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGATCAAGAAGACCTGTTaGTCTTGCTCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRIKKTC*SCSIFV
Trigger: GACAAAGATGGAGCAAGACAAACAGGTCTTCTTGAT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGATTTTTCAATCTGGCTaGTGCTGGTCAAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRIFQSG*CWSNLD
Trigger: ATCCAGGTTTGACCAGCACAAGCCAGATTGAAAAAT...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AAAGCCCAGAACAGCAAAAGAACCTCAAACCACAGCCTTATGGCAAGGGTTAGACTATCACCCTGGAAATaGAGGGTTGTTTTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: KAQNSKRTSNHSLMARVRLSPWK*RVVFKE
Trigger: CTCCTTAAAAACAACCCTCAATTTCCAGGGTGATAG...TCTAACCCTTGCCATAAGGCTGTGGTTTGAGGTTCTTTTGCTGTTCTGGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTACCTACTAACACTGACTaGCGTAAAGTGCTGCTAACC +
Preference number: 5 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLPTNTD*RKVLLT
Trigger: GGTTAGCAGCACTTTACGCAAGTCAGTGTTAGTAGG...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTTGGAGCCCAAATATTaGGTTTGCATCTCTTTAAGT +
Preference number: 5 (lower is better)
Translates to: EIRSQNMDVHMWHELLIALEPKY*VCISLS
Trigger: ACTTAAAGAGATGCAAACCAAATATTTGGGCTCCAA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTCCTTCCAGGAGTAACTaGAAAAGTATTACTTGCTCA +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCPSRSN*KSITCS
Trigger: TGAGCAAGTAATACTTTTCAAGTTACTCCTGGAAGG...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp GAGATCAGGTCCCAGAACATGGATGTACACATGTGGCATGAACTGCTGATTGCGTGTCTTGATGAGGGGTaGGCTTTAAAAATTTACATC +
Preference number: 5 (lower is better)
Translates to: EIRSQNMDVHMWHELLIACLDEG*ALKIYI
Trigger: GATGTAAATTTTTAAAGCCAACCCCTCATCAAGACA...CGCAATCAGCAGTTCATGCCACATGTGTACATCCATGTTCTGGGACCTGATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS CCA 90 bp AAATTGAACTCAAAGACTGATCTAGTTTGGGTATTATTAGAACACTaGCTTTTCCTCTGTTTTCTGCCCAGGCCTGAAGTTCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: KLNSKTDLVWVLLEH*LFLCFLPRPEVPGS
Trigger: GCTCCCAGGAACTTCAGGCCTGGGCAGAAAACAGAGGAAAAGCCAGTGTTCTAATAATACCCAAACTAGATCAGTCTTTGAGTTCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTATAGATTTTCTCAGTaGAAGCAGCACAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCYRFSQ*KQHNCL
Trigger: CAAGCAATTGTGCTGCTTCAACTGAGAAAATCTATA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp AAGCAAAATCACGTTTTCTGCAAGGTTGTTTCACCACAGCCCAACACTTCCTTAAGTTCTTCTGTTATGTaGGAGCTCATCAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: KQNHVFCKVVSPQPNTSLSSSVM*ELISLS
Trigger: ACTCAGGCTGATGAGCTCCAACATAACAGAAGAACT...TAAGGAAGTGTTGGGCTGTGGTGAAACAACCTTGCAGAAAACGTGATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTTTACCTATGACCCCATaGCACATAAAGTCATTTACA +
Preference number: 5 (lower is better)
Translates to: FFVCERSWKDSVAPWQVCLPMTP*HIKSFT
Trigger: TGTAAATGACTTTATGTGCAATGGGGTCATAGGTAA...ACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS CCA 90 bp TTTAGCATGCTCTGCAGTGCTATACACAGTCTGTGGGCAAACAAGTaGAACTTCAATGTGTACTGGATTATATGCGCTAACAAAACTTGG +
Preference number: 5 (lower is better)
Translates to: FSMLCSAIHSLWANK*NFNVYWIICANKTW
Trigger: CCAAGTTTTGTTAGCGCATATAATCCAGTACACATTGAAGTTCCACTTGTTTGCCCACAGACTGTGTATAGCACTGCAGAGCATGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS-3UTR CAA 90 bp TACTTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTATAGATTTTCTCAGTaGAAGCAGCACAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: YFSLYVNGPGRILLLLGRYRFSQ*KQHNCL
Trigger: CAAGCAATTGTGCTGCTTCAACTGAGAAAATCTATA...CCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000617312.4
CDS-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGACAAAAGACAAAGCAATaGACCGGGTCTTCCACATGC +
Preference number: 5 (lower is better)
Translates to: CPQRTMKVKALETARVLRQKTKQ*TGSSTC
Trigger: GCATGTGGAAGACCCGGTCAATTGCTTTGTCTTTTG...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS GCA 90 bp TGTTTGGCCAATGGTTTAATTAGGACACAGATTAAATCTATTCAGTaGGTGACATCATCAGGCACTGCAGCATATTTCTTTGGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: CLANGLIRTQIKSIQ*VTSSGTAAYFFGAV
Trigger: TACAGCCCCAAAGAAATATGCTGCAGTGCCTGATGATGTCACGCACTGAATAGATTTAATCTGTGTCCTAATTAAACCATTGGCCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS-3UTR CAA 90 bp TCTCAAACAGGAAAAGCTTGCTATATATTCACATCCGTGGGAATTTACGGGTGTTCTGAAGTGTCACCGTaGTTCAAAGATTCACTTAGG +
Preference number: 5 (lower is better)
Translates to: SQTGKACYIFTSVGIYGCSEVSP*FKDSLR
Trigger: CCTAAGTGAATCTTTGAACAACGGTGACACTTCAGA...ACACCCGTAAATTCCCACGGATGTGAATATATAGCAAGCTTTTCCTGTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGACACAAGCACCCCCAATaGTATTGGAAGTACTGTCAA +
Preference number: 5 (lower is better)
Translates to: CPQRTMKVKALETARVLRHKHPQ*YWKYCQ
Trigger: TTGACAGTACTTCCAATACAATTGGGGGTGCTTGTG...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGACTGGAATTCTTCCTTTaGCAGAGTGGAGATTCTGAC +
Preference number: 5 (lower is better)
Translates to: CPQRTMKVKALETARVLRLEFFL*QSGDSD
Trigger: GTCAGAATCTCCACTCTGCAAAAGGAAGAATTCCAG...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp TGTCCTCAAAGGACTATGAAAGTAAAAGCACTAGAAACAGCTAGAGTCCTTAGAATTTTTCAATCTGGCTaGTGCTGGTCAAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: CPQRTMKVKALETARVLRIFQSG*CWSNLD
Trigger: ATCCAGGTTTGACCAGCACAAGCCAGATTGAAAAAT...TCTAAGGACTCTAGCTGTTTCTAGTGCTTTTACTTTCATAGTCCTTTGAGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS-3UTR CAA 90 bp AGAGGATATAAACACATGTACATTCATTCAGTCTTACAGCCTAGAAACCTGTACTGCTGTAAACTCTGGTaGCTACAATTTATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: RGYKHMYIHSVLQPRNLYCCKLW*LQFMRR
Trigger: TCTCCTCATAAATTGTAGCAACCAGAGTTTACAGCA...GTACAGGTTTCTAGGCTGTAAGACTGAATGAATGTACATGTGTTTATATCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617312.4
CDS TCA 72 bp TTGTTATTGTTTTTGTCAGTGAAAGGTCAGAGTTCGTaGCCCCGGTGCCGCCGCCGCCGCCGCCCGCGCGCT +
Preference number: 6 (lower is better)
Translates to: LLLFLSVKGQSS*PRCRRRRRPRA
Trigger: AGCGCGCGGGCGGCGGCGGCGGCGGCACCGGGGTCACGAACTCTGACCTTTCACTGACAAAAACAATAACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413118.5
ENST00000425241.5
CDS GCA 72 bp CCAGTTCCAGCTCCATCTGGGCTGGTCAGGATGAACTaGTGTTTGGGGGATCCGGAGGCGTCCACTGCGGTG +
Preference number: 6 (lower is better)
Translates to: PVPAPSGLVRMN*CLGDPEASTAV
Trigger: CACCGCAGTGGACGCCTCCGGATCCCCCAAACAGCAGTTCATCCTGACCAGCCCAGATGGAGCTGGAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413118.5
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 72 bp GGCTACAGCAGAGTCGGTGGAGATTATCTGGATGCGTaGGGAGGGGCTGGTCATCCCTGGAGATTCCGGCCG +
Preference number: 6 (lower is better)
Translates to: GYSRVGGDYLDA*GGAGHPWRFRP
Trigger: CGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGACTCTGCTGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000413118.5
ENST00000425241.5
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
CDS CCA 72 bp GCCAGGATGGTGGAGAGACTCATGACCTGGGCACACTaGGCCAGGCCGAGGGTGAAGAGCTCATTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: ARMVERLMTWAH*ARPRVKSSFQQ
Trigger: CTGCTGGAATGAGCTCTTCACCCTCGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCATCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413194.1
ENST00000425241.5
ENST00000439011.5
ENST00000475707.5
ENST00000478572.1
ENST00000495282.1
ENST00000617312.4
CDS TCA 72 bp TGGGAGCGGGTCGGGGACCCTGAGTGGATCCCAGTCTaGACAGCCCCACATGATTGGTTCTGGACATCTGGC +
Preference number: 6 (lower is better)
Translates to: WERVGDPEWIPV*TAPHDWFWTSG
Trigger: GCCAGATGTCCAGAACCAATCATGTGGGGCTGTTCAGACTGGGATCCACTCAGGGTCCCCGACCCGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS CCA 72 bp CCACAGACCACACAGTACTCTACCACCTGGGGCCGCTaGACGTCCGTCTTCCCCAGTAAACGCTCCACAGAG +
Preference number: 6 (lower is better)
Translates to: PQTTQYSTTWGR*TSVFPSKRSTE
Trigger: CTCTGTGGAGCGTTTACTGGGGAAGACGGACGTCCAGCGGCCCCAGGTGGTAGAGTACTGTGTGGTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CAA 72 bp CCAGCTCCATCTGGGCTGGTCAGGATGAACTGCTGTTaGGGGGATCCGGAGGCGTCCACTGCGGTGACTATC +
Preference number: 6 (lower is better)
Translates to: PAPSGLVRMNCC*GDPEASTAVTI
Trigger: GATAGTCACCGCAGTGGACGCCTCCGGATCCCCCAAACAGCAGTTCATCCTGACCAGCCCAGATGGAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413118.5
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS GCA 72 bp CACTCAATGGGCCAGAGGCAGGTTCAGAGCCCTGAATaGGCTGAGGTGAGGCTACAGCAGAGTCGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: HSMGQRQVQSPE*AEVRLQQSRWR
Trigger: TCTCCACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAGGGCTCTGAACCTGCCTCTGGCCCATTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 72 bp CCTGAATGCGCTGAGGTGAGGCTACAGCAGAGTCGGTaGAGATTATCTGGATGCGTGGGGAGGGGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: PECAEVRLQQSR*RLSGCVGRGWS
Trigger: TGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 72 bp GATTATCTGGATGCGTGGGGAGGGGCTGGTCATCCCTaGAGATTCCGGCCGAGAGGTCTGTGTACGTGTTAC +
Preference number: 6 (lower is better)
Translates to: DYLDAWGGAGHP*RFRPRGLCTCY
Trigger: GTAACACGTACACAGACCTCTCGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCACGCATCCAGATAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000413118.5
ENST00000425241.5
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
CDS CCA 72 bp AGGAGGGGGCCTTCAACCTCAATGATGGGTGTCGACTaGTCTCTGCTGATGACGTGGATGCTCCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: RRGPSTSMMGVD*SLLMTWMLPPP
Trigger: TGGAGGAGGGAGCATCCACGTCATCAGCAGAGACCAGTCGACACCCATCATTGAGGTTGAAGGCCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CCA 72 bp TCTGAATGCGCTGAGGTGAGGCTACAGCAGAGTCGGTaGAGATTATCTGGATGCGTGGGGAGGGGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SECAEVRLQQSR*RLSGCVGRGWS
Trigger: TGACCAGCCCCTCCCCACGCATCCAGATAATCTCCACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393102.7
ENST00000406272.6
ENST00000413118.5
ENST00000425241.5
CDS CAA 90 bp TTCCCAGTTCCAGCTCCATCTGGGCTGGTCAGGATGAACTGCTGTTaGGGGGATCCGGAGGCGTCCACTGCGGTGACTATCTGGATTTTC +
Preference number: 6 (lower is better)
Translates to: FPVPAPSGLVRMNCC*GDPEASTAVTIWIF
Trigger: GAAAATCCAGATAGTCACCGCAGTGGACGCCTCCGGATCCCCCAAACAGCAGTTCATCCTGACCAGCCCAGATGGAGCTGGAACTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413118.5
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS TCA 72 bp GCCAGAGGCAGGTTCAGAGCCCTGAATGCGCTGAGGTaGGGCTACAGCAGAGTCGGTGGAGATTATCTGGAT +
Preference number: 6 (lower is better)
Translates to: ARGRFRALNALR*GYSRVGGDYLD
Trigger: ATCCAGATAATCTCCACCGACTCTGCTGTAGCCTCACCTCAGCGCATTCAGGGCTCTGAACCTGCCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000435454.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS GCA 72 bp CCAGGGACGAGGTTGTCTGAGGTGGTGAATATGAGTTaGTTGGCGCTGGATGTCTCTGGGGAAGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: PGTRLSEVVNMS*LALDVSGEARI
Trigger: GATCCTGGCTTCCCCAGAGACATCCAGCGCCAAGCAACTCATATTCACCACCTCAGACAACCTCGTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 72 bp GGTGGTGAATATGAGTTGCTTGGCGCTGGATGTCTCTaGGGAAGCCAGGATCACCTTCCCAGTTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GGEYELLGAGCL*GSQDHLPSSSS
Trigger: GGAGCTGGAACTGGGAAGGTGATCCTGGCTTCCCCAGAGACATCCAGCGCCAAGCAACTCATATTCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS GCA 72 bp AAGTTCTTCTGTTATGTTGGAGCTCATCAGCCTGAGTaGCGGCAGGCGAACGAGGATCCGGGCCAATCGGTA +
Preference number: 6 (lower is better)
Translates to: KFFCYVGAHQPE*RQANEDPGQSV
Trigger: TACCGATTGGCCCGGATCCTCGTTCGCCTGCCGGCACTCAGGCTGATGAGCTCCAACATAACAGAAGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS GCA 72 bp AAGGAGGAATGTGCACCTTCTGAGAGCTTCTCTCACTaGTACCGCAGCCATAGGCGGTCCTCAGGATTTGGC +
Preference number: 6 (lower is better)
Translates to: KEECAPSESFSH*YRSHRRSSGFG
Trigger: GCCAAATCCTGAGGACCGCCTATGGCTGCGGTAGCAGTGAGAGAAGCTCTCAGAAGGTGCACATTCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435454.5
CDS CCA 72 bp GAGGTCACTACATTTGCCAGTGTGCCCAGAGCTCCCTaGCTTGTTTCAGCCTTAGAATCCGTGGCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: EVTTFASVPRAP*LVSALESVARR
Trigger: TCTCCTGGCCACGGATTCTAAGGCTGAAACAAGCCAGGGAGCTCTGGGCACACTGGCAAATGTAGTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000617312.4
CDS TCA 72 bp CGTGACAATCTGGATCCTGCCAGGGACGAGGTTGTCTaGGGTGGTGAATATGAGTTGCTTGGCGCTGGATGT +
Preference number: 6 (lower is better)
Translates to: RDNLDPARDEVV*GGEYELLGAGC
Trigger: ACATCCAGCGCCAAGCAACTCATATTCACCACCTCAGACAACCTCGTCCCTGGCAGGATCCAGATTGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS GCA 72 bp TTAGGTTGGCAAGGGAGGTCACTACATTTGCCAGTGTaGCCAGAGCTCCCTGGCTTGTTTCAGCCTGCAATC +
Preference number: 6 (lower is better)
Translates to: LGWQGRSLHLPV*PELPGLFQPAI
Trigger: GATTGCAGGCTGAAACAAGCCAGGGAGCTCTGGGCACACTGGCAAATGTAGTGACCTCCCTTGCCAACCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478572.1
CDS CCA 72 bp GTATGTGAACGGTCCTGGAAGGATTCTGTTGCTCCTTaGCAGGTGTGTGGTTTGCGCTATAGACTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: VCERSWKDSVAP*QVCGLRYRLAP
Trigger: CGGAGCCAGTCTATAGCGCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CAA 90 bp CGGTCACCAGAAAGTTTATCTTCCTGGATGCTGTTCTGCAGGTGGTaGACAATGGCAGCCAGGATGGTGGAGAGACTCATGACCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RSPESLSSWMLFCRW*TMAARMVERLMTWA
Trigger: TGCCCAGGTCATGAGTCTCTCCACCATCCTGGCTGCCATTGTCAACCACCTGCAGAACAGCATCCAGGAAGATAAACTTTCTGGTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413194.1
ENST00000425241.5
ENST00000439011.5
ENST00000475707.5
ENST00000478572.1
ENST00000495282.1
ENST00000617312.4
CDS CAA 90 bp GAACGGTCCTGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTaGCGCTATAGACTGGCTCCGGTGATCTGGCCATTATACTCTGCT +
Preference number: 6 (lower is better)
Translates to: ERSWKDSVAPWQVCG*RYRLAPVIWPLYSA
Trigger: AGCAGAGTATAATGGCCAGATCACCGGAGCCAGTCTATAGCGCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS TCA 72 bp CAGTTAATAAGGGGAGTGAGGCCAGCCCAGGCATCGTaGTTGCTGCCTCTTCATCTCCTGCGAACATACCTT +
Preference number: 6 (lower is better)
Translates to: QLIRGVRPAQAS*LLPLHLLRTYL
Trigger: AAGGTATGTTCGCAGGAGATGAAGAGGCAGCAATCACGATGCCTGGGCTGGCCTCACTCCCCTTATTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS CCA 72 bp CTGAGTGTGGTGTGTGTTGGCATTTCTCCAAGGTTGTaGGGCATCCAGGCACTAAGTCCCAGCATTTCCCAA +
Preference number: 6 (lower is better)
Translates to: LSVVCVGISPRL*GIQALSPSISQ
Trigger: TTGGGAAATGCTGGGACTTAGTGCCTGGATGCCCCACAACCTTGGAGAAATGCCAACACACACCACACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495282.1
CDS CAA 72 bp TGGAAGGATTCTGTTGCTCCTTGGCAGGTGTGTGGTTaGCGCTATAGACTGGCTCCGGTGATCTGGCCATTA +
Preference number: 6 (lower is better)
Translates to: WKDSVAPWQVCG*RYRLAPVIWPL
Trigger: TAATGGCCAGATCACCGGAGCCAGTCTATAGCGCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CAA 72 bp AGTCTGAGTGTGGTGTGTGTTGGCATTTCTCCAAGGTaGTGGGGCATCCAGGCACTAAGTCCCAGCATTTCC +
Preference number: 6 (lower is better)
Translates to: SLSVVCVGISPR*WGIQALSPSIS
Trigger: GGAAATGCTGGGACTTAGTGCCTGGATGCCCCACAACCTTGGAGAAATGCCAACACACACCACACTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495282.1
CDS CAA 90 bp GGCTGGATTTCTGAAGTGTCACCGTTGTTCAAAGATTCACTTAGGTaGGCAAGGGAGGTCACTACATTTGCCAGTGTGCCCAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: GWISEVSPLFKDSLR*AREVTTFASVPRAP
Trigger: GGGAGCTCTGGGCACACTGGCAAATGTAGTGACCTCCCTTGCCAACCTAAGTGAATCTTTGAACAACGGTGACACTTCAGAAATCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS TCA 72 bp GCGAACGAGGATCCGGGCCAATCGGTAGGTGTCTTCTaGGTAGGTTTTCTGAACATAGTCCTGCAACTCCAT +
Preference number: 6 (lower is better)
Translates to: ANEDPGQSVGVF*VGFLNIVLQLH
Trigger: ATGGAGTTGCAGGACTATGTTCAGAAAACCTACTCAGAAGACACCTACCGATTGGCCCGGATCCTCGTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CCA 72 bp ACCGTAGGTATGTATGACATAACCACTGGGAGGACCTaGGCGAAGGCTATGTGGGAGCTCTGTAATAGCACT +
Preference number: 6 (lower is better)
Translates to: TVGMYDITTGRT*AKAMWELCNST
Trigger: AGTGCTATTACAGAGCTCCCACATAGCCTTCGCCCAGGTCCTCCCAGTGGTTATGTCATACATACCTACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478572.1
CDS CAA 90 bp ATAGAAAGGAGTCTGAGTGTGGTGTGTGTTGGCATTTCTCCAAGGTaGTGGGGCATCCAGGCACTAAGTCCCAGCATTTCCCAAACAGGT +
Preference number: 6 (lower is better)
Translates to: IERSLSVVCVGISPR*WGIQALSPSISQTG
Trigger: ACCTGTTTGGGAAATGCTGGGACTTAGTGCCTGGATGCCCCACAACCTTGGAGAAATGCCAACACACACCACACTCAGACTCCTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495282.1
CDS GCA 72 bp TCAGTTGAAGCAGCACAATTGCTTGGTTTCTCCCGTTaGACATCGAAGGGCTTCCGTTCACTCTGCACAGAT +
Preference number: 6 (lower is better)
Translates to: SVEAAQLLGFSR*TSKGFRSLCTD
Trigger: ATCTGTGCAGAGTGAACGGAAGCCCTTCGATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000617312.4
CDS GCA 72 bp GCCAGGAGAACTGTACCATCCTCACGTATCAAAGGCTaGTGGATGTTCACAAGCATCCCTGGATCAAGAAGA +
Preference number: 6 (lower is better)
Translates to: ARRTVPSSRIKG*WMFTSIPGSRR
Trigger: TCTTCTTGATCCAGGGATGCTTGTGAACATCCAGCAGCCTTTGATACGTGAGGATGGTACAGTTCTCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000617312.4
CDS TCA 72 bp AATGTCCTCGTTGTGATACTGTACCGTAGGTATGTATaGCATAACCACTGGGAGGACCTGGGCGAAGGCTAT +
Preference number: 6 (lower is better)
Translates to: NVLVVILYRRYV*HNHWEDLGEGY
Trigger: ATAGCCTTCGCCCAGGTCCTCCCAGTGGTTATGTCATACATACCTACGGTACAGTATCACAACGAGGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478572.1
CDS GCA 72 bp CAGAACTCCTGCAGCTTCCAGATGTGCTCCATGACTTaGTTTATCCGGTCACCAGAAAGTTTATCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: QNSCSFQMCSMT*FIRSPESLSSW
Trigger: CCAGGAAGATAAACTTTCTGGTGACCGGATAAAGCAAGTCATGGAGCACATCTGGAAGCTGCAGGAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413194.1
ENST00000425241.5
ENST00000439011.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS GCA 72 bp CTGCCTCTTCATCTCCTGCGAACATACCTTTTAGCATaGTCTGCAGTGCTATACACAGTCTGTGGGCAAACA +
Preference number: 6 (lower is better)
Translates to: LPLHLLRTYLLA*SAVLYTVCGQT
Trigger: TGTTTGCCCACAGACTGTGTATAGCACTGCAGAGCATGCTAAAAGGTATGTTCGCAGGAGATGAAGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS CCA 72 bp CTGAAGTGTCACCGTTGTTCAAAGATTCACTTAGGTTaGCAAGGGAGGTCACTACATTTGCCAGTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: LKCHRCSKIHLG*QGRSLHLPVCP
Trigger: TGGGCACACTGGCAAATGTAGTGACCTCCCTTGCCAACCTAAGTGAATCTTTGAACAACGGTGACACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CCA 72 bp GCCCGAGTTATCTCACTTGCAGACTGGTCCTCTGGCTaGATTTCTGAAGTGTCACCGTTGTTCAAAGATTCA +
Preference number: 6 (lower is better)
Translates to: ARVISLADWSSG*ISEVSPLFKDS
Trigger: TGAATCTTTGAACAACGGTGACACTTCAGAAATCCAGCCAGAGGACCAGTCTGCAAGTGAGATAACTCGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CCA 72 bp AAGGTATCAAATGCCCGAGTTATCTCACTTGCAGACTaGTCCTCTGGCTGGATTTCTGAAGTGTCACCGTTG +
Preference number: 6 (lower is better)
Translates to: KVSNARVISLAD*SSGWISEVSPL
Trigger: CAACGGTGACACTTCAGAAATCCAGCCAGAGGACCAGTCTGCAAGTGAGATAACTCGGGCATTTGATACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CAA 90 bp GCAAAACTGACAGCGGTTCCGGTGATGTTTATTGATGATGCAGTCTaGGTTGCTCCGGCAGCTGTAGGTCAAATTTTTCCTCACACTCCT +
Preference number: 6 (lower is better)
Translates to: AKLTAVPVMFIDDAV*VAPAAVGQIFPHTP
Trigger: AGGAGTGTGAGGAAAAATTTGACCTACAGCTGCCGGAGCAACCAAGACTGCATCATCAATAAACATCACCGGAACCGCTGTCAGTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS CAA 90 bp TCACTTGCAGACTGGTCCTCTGGCTGGATTTCTGAAGTGTCACCGTaGTTCAAAGATTCACTTAGGTTGGCAAGGGAGGTCACTACATTT +
Preference number: 6 (lower is better)
Translates to: SLADWSSGWISEVSP*FKDSLRLAREVTTF
Trigger: AAATGTAGTGACCTCCCTTGCCAACCTAAGTGAATCTTTGAACAACGGTGACACTTCAGAAATCCAGCCAGAGGACCAGTCTGCAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS GCA 72 bp ATCAAGAAGACCTGTTTGTCTTGCTCCATCTTTGTCTaGCACAAACGTGGGAGTAGCTATCAGGGGACTTCT +
Preference number: 6 (lower is better)
Translates to: IKKTCLSCSIFV*HKRGSSYQGTS
Trigger: AGAAGTCCCCTGATAGCTACTCCCACGTTTGTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000617312.4
CDS GCA 72 bp ATGCATACTCATAGCCATCTATATCCAGCTTCGCCATaGTGTTACAGAACTCCTGCAGCTTCCAGATGTGCT +
Preference number: 6 (lower is better)
Translates to: MHTHSHLYPASP*CYRTPAASRCA
Trigger: AGCACATCTGGAAGCTGCAGGAGTTCTGTAACAGCATGGCGAAGCTGGATATAGATGGCTATGAGTATGCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413194.1
ENST00000425241.5
ENST00000439011.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CAA 72 bp TTTTCTTTGTATGTGAACGGTCCTGGAAGGATTCTGTaGCTCCTTGGCAGGTGTGTGGTTTGCGCTATAGAC +
Preference number: 6 (lower is better)
Translates to: FSLYVNGPGRIL*LLGRCVVCAID
Trigger: GTCTATAGCGCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTCACATACAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323373.10
ENST00000425241.5
ENST00000475707.5
ENST00000478572.1
ENST00000617312.4
CDS CCA 72 bp ACGTATCAAAGGCTGCTGGATGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTGTCTTGCTCCATCTTT +
Preference number: 6 (lower is better)
Translates to: TYQRLLDVHKHP*IKKTCLSCSIF
Trigger: AAAGATGGAGCAAGACAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAACATCCAGCAGCCTTTGATACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000425241.5
ENST00000475707.5
ENST00000617312.4
CDS CCA 72 bp CATCATTACCTACAGCCTTCAAAAGCCTCAGCATCCTaGACTGACTGTCCCAAGAGATGGTATCAGTTACTT +
Preference number: 6 (lower is better)
Translates to: HHYLQPSKASAS*TDCPKRWYQLL
Trigger: AAGTAACTGATACCATCTCTTGGGACAGTCAGTCCAGGATGCTGAGGCTTTTGAAGGCTGTAGGTAATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495282.1
CDS CCA 72 bp CTCTGCAGTGCTATACACAGTCTGTGGGCAAACAAGTaGAACTTCAATGTGTACTGGATTATATGCGCTAAC +
Preference number: 6 (lower is better)
Translates to: LCSAIHSLWANK*NFNVYWIICAN
Trigger: GTTAGCGCATATAATCCAGTACACATTGAAGTTCCACTTGTTTGCCCACAGACTGTGTATAGCACTGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS CCA 72 bp CCTTTTAGCATGCTCTGCAGTGCTATACACAGTCTGTaGGCAAACAAGTGGAACTTCAATGTGTACTGGATT +
Preference number: 6 (lower is better)
Translates to: PFSMLCSAIHSL*ANKWNFNVYWI
Trigger: AATCCAGTACACATTGAAGTTCCACTTGTTTGCCCACAGACTGTGTATAGCACTGCAGAGCATGCTAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS CAA 72 bp TTCTGTCCTGTCTGCTGGTCTGTGACAATCTTCTCTTaGTTCAAAGATGTGAAAACACTCAATGGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: FCPVCWSVTIFS*FKDVKTLNGPE
Trigger: CTCTGGCCCATTGAGTGTTTTCACATCTTTGAACAAAGAGAAGATTGTCACAGACCAGCAGACAGGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323373.10
ENST00000437120.5
ENST00000475707.5
ENST00000617312.4
CDS TCA 72 bp ATAGAGTCAGAAAGCAGATTAGTGGTTGGTAGGGTTTaGGAAGAGGGGGAAAGGAGGAGTGACTACATAATA +
Preference number: 6 (lower is better)
Translates to: IESESRLVVGRV*EEGERRSDYII
Trigger: TATTATGTAGTCACTCCTCCTTTCCCCCTCTTCTCAAACCCTACCAACCACTAATCTGCTTTCTGACTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478572.1
CDS GCA 72 bp CTTACCGGGGCTAAAGAGAACTATAGCTTTAAGGTATaGATACTCATAGCCATCTATATCCAGCTTCGCCAT +
Preference number: 6 (lower is better)
Translates to: LTGAKENYSFKV*ILIAIYIQLRH
Trigger: ATGGCGAAGCTGGATATAGATGGCTATGAGTATGCATACCTTAAAGCTATAGTTCTCTTTAGCCCCGGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS GCA 72 bp ATGATCGGGGCTAAAGAGAACTATAGCTTTAAGGTATaGATACTCATAGCCATCTATATCCAGCTTCGCCAT +
Preference number: 6 (lower is better)
Translates to: MIGAKENYSFKV*ILIAIYIQLRH
Trigger: ATGGCGAAGCTGGATATAGATGGCTATGAGTATGCATACCTTAAAGCTATAGTTCTCTTTAGCCCCGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323373.10
ENST00000393102.7
ENST00000406272.6
ENST00000413194.1
ENST00000425241.5
ENST00000439011.5
ENST00000478572.1
ENST00000617312.4
CDS GCA 72 bp AACACCTATCATAAGAACACTAGGTCACATACAATCTaGAGGGCTCTTTCTACACCAATGATGACAACATGT +
Preference number: 6 (lower is better)
Translates to: NTYHKNTRSHTI*RALSTPMMTTC
Trigger: ACATGTTGTCATCATTGGTGTAGAAAGAGCCCTGCAGATTGTATGTGACCTAGTGTTCTTATGATAGGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475707.5
CDS CAA 72 bp AGCATTTCCCAAACAGGTGAATTCAGCAAGTGTTTATaGAAGTGCTATCCAGGATCATTCTTCAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SISQTGEFSKCL*KCYPGSFFKKR
Trigger: CCTTTTCTTGAAGAATGATCCTGGATAGCACTTCAATAAACACTTGCTGAATTCACCTGTTTGGGAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495282.1
CDS GCA 72 bp GAAATGATTAAATCACAACAGACACATAGAATACTGTaGAGCTACTGTAAGATCCTCATTAACAGAAAGGTA +
Preference number: 6 (lower is better)
Translates to: EMIKSQQTHRIL*SYCKILINRKV
Trigger: TACCTTTCTGTTAATGAGGATCTTACAGTAGCTGCACAGTATTCTATGTGTCTGTTGTGATTTAATCATTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478572.1