RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR1H2 (Homo sapiens)

Ensembl gene IDs: ENSG00000131408

Ensembl transcript IDs: ENST00000253727.10, ENST00000411902.6, ENST00000593532.5, ENST00000593926.5, ENST00000595730.5, ENST00000597085.1, ENST00000597130.5, ENST00000597157.1, ENST00000597790.5, ENST00000598168.5, ENST00000599105.5, ENST00000600355.5, ENST00000600978.1, ENST00000652203.1

Found 743 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACAG +
Preference number: 1 (lower is better)
Translates to: AGVYLLEGGQARLWG*VASPSLVDVPDLRQ
Trigger: CTGTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR CCA 90 bp AGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTC +
Preference number: 1 (lower is better)
Translates to: RGAGVYLLEGGQARL*GWVASPSLVDVPDL
Trigger: GAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR TCA 90 bp AGGGAGGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACC +
Preference number: 1 (lower is better)
Translates to: REGASWTWTGAYPKG*EPIGLQARPRAPST
Trigger: GGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR CCA 90 bp AGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTaGGCAGGGAGGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCA +
Preference number: 1 (lower is better)
Translates to: SGRDLQPFHPFWKTR*AGREPPGPGLGLIP
Trigger: TGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCCTCCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR CCA 90 bp CCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCTaGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAG +
Preference number: 1 (lower is better)
Translates to: PPNTGTLCATLFPTA*GHPVPPAQSGSGTQ
Trigger: CTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR CCA 90 bp GCCTCTGTCCTGAACTTTCACAGCAGGCGACACACCACCCAACACTaGGACCCTATGTGCCACCCTTTTCCCAACAGCCTGGGGACACCC +
Preference number: 1 (lower is better)
Translates to: ASVLNFHSRRHTTQH*DPMCHPFPNSLGTP
Trigger: GGGTGTCCCCAGGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCCTGCTGTGAAAGTTCAGGACAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR TCA 90 bp TCCCCTCATTCACTTAAATCCTGTTTATCCTTCAAGGGTGAGTTCTaGTTCACCTTGTCCAGGGAGGTGACCCTGAGGCTGAGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: SPHSLKSCLSFKGEF*FTLSREVTLRLRPL
Trigger: CAGAGGCCTCAGCCTCAGGGTCACCTCCCTGGACAAGGTGAATCAGAACTCACCCTTGAAGGATAAACAGGATTTAAGTGAATGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR CCA 90 bp GCAGGGCGTACTCAGCGTCGTCCAGGCCCAGCCGCCGCATGGCCCGCGAGAACTGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: AGRTQRRPGPAAAWPARTGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...AGTTCTCGCGGGCCATGCGGCGGCTGGGCCTGGACGACGCTGAGTACGCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR CAA 90 bp ACGCGGCCCGGCTCCTGCACGTTGGGCCGGTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCGTACTCAGCGTCGTCCAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: TRPGSCTLGRSAEKM*MAMSRAYSASSRPS
Trigger: GCTGGGCCTGGACGACGCTGAGTACGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGGCCGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 2 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp CCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: PGRVSGRDLQPFHPFWKTGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...AGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GCAGGGCGTACTCAGCGTCGTCCAGGCCCAGCCGCCGCATGGCCCGCGAGAACTAGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 2 (lower is better)
Translates to: AGRTQRRPGPAAAWPARTSVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCT...AGTTCTCGCGGGCCATGCGGCGGCTGGGCCTGGACGACGCTGAGTACGCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR TCA 90 bp AGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RGGSFLSWSRKAKTCSECTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...GCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR CCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 2 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGCCGGGAAGGGTCAGTaGTCGGGACCTGCAACCCTT +
Preference number: 2 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLAGKGQ*SGPATL
Trigger: AAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGC...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCTTGTTGCACTGCAGTTaGGCCGCCACCAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPLLHCS*AATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAA...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGAGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 2 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR GCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 2 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPRRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: GDTQSHLLNQVRAPSVTEPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR CCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 2 (lower is better)
Translates to: REGSREGSVVGTCNPFTPLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp AGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RGGSFLSWSRKAKTCSECPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...GCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGGCCGGGAAGGGTCAGTaGTCGGGACCTGCAACCCTT +
Preference number: 2 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVAGKGQ*SGPATL
Trigger: AAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGC...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR TCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 2 (lower is better)
Translates to: GESHGSSPPSVQGALRAGSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 2 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 2 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp AGGCTGTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGAGATCTCGATAGTGGATaGCTTCAGGAGGGCGATCTG +
Preference number: 2 (lower is better)
Translates to: RLWGWVASPSLVDVPDLRDLDSG*LQEGDL
Trigger: CAGATCGCCCTCCTGAAGGCATCCACTATCGAGATC...TCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 2 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 2 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR TCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 2 (lower is better)
Translates to: REGSREGSVVGTCNPFTPAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GCCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 2 (lower is better)
Translates to: AWGHPVPPAQSGSGTQCHLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...GTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR GCA 90 bp GCAGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 2 (lower is better)
Translates to: AEAAASCPGAARRRPAPSLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...ACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CCA 90 bp CCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: PGRVSGRDLQPFHPFWKTLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...AGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 2 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGCTTTTCCCAACAGCCTaGGGACACCCAGTCCCACCT +
Preference number: 2 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRLFPTA*GHPVPP
Trigger: AGGTGGGACTGGGTGTCCCCAGGCTGTTGGGAAAAG...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR CAA 90 bp TCCTCCCGGCCCAGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTAGT +
Preference number: 2 (lower is better)
Translates to: SSRPSVTLGWSEKER*LHCSWAATNCWIIS
Trigger: ACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCTGGGCCGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR TCA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 2 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR TCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGTTCAAGGGTGAGTTCTaGTTCACCTTGTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWFKGEF*FTLSRE
Trigger: CTCCCTGGACAAGGTGAATCAGAACTCACCCTTGAA...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR GCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR GCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR CAA 90 bp TCCCGGCCCAGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTAGTTCT +
Preference number: 2 (lower is better)
Translates to: SRPSVTLGWSEKERL*HCSWAATNCWIISS
Trigger: AGAACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCTGGGCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR GCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGATCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR TCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 2 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR-3UTR TCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 2 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR CAA 90 bp GGCCAACCCAGTGCCTGGCCCACAGGAGGCCTCAGCAAACACTTGTaGTTCGGACAGAAGTCCAGGTCCCCTCATTCACTTAAATCCTGT +
Preference number: 2 (lower is better)
Translates to: GQPSAWPTGGLSKHL*FGQKSRSPHSLKSC
Trigger: ACAGGATTTAAGTGAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGTGGGCCAGGCACTGGGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR CAA 90 bp AATGGCCAACCCAGTGCCTGGCCCACAGGAGGCCTCAGCAAACACTaGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCACTTAAATCC +
Preference number: 2 (lower is better)
Translates to: NGQPSAWPTGGLSKH*LFGQKSRSPHSLKS
Trigger: GGATTTAAGTGAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGTGGGCCAGGCACTGGGTTGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR CAA 90 bp CACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTaGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATTTTCC +
Preference number: 2 (lower is better)
Translates to: HPVSLRSLEARALSI*HSSSGLDCIHILFS
Trigger: GGAAAATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR CCA 90 bp GGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGACTCCAGCTCCGGGCTaGATTGTATTCATATTTTAT +
Preference number: 2 (lower is better)
Translates to: GTPSPTCSIRFGHPVSLRTPAPG*IVFIFY
Trigger: ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGT...CCTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR GCA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: NIYWVNVSISRMANPVPGRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR CCA 90 bp CTCATTCACTTAAATCCTGTTTATCCTTCAAGGGTGAGTTCTGATTCACCTTGTGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: LIHLNPVYPSRVSSDSPCGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...ACAAGGTGAATCAGAACTCACCCTTGAAGGATAAACAGGATTTAAGTGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR CCA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCCACACCACCCAACACTaGGACCCTATGTGCCACCCT +
Preference number: 2 (lower is better)
Translates to: NIYWVNVSISRMANPVPGHTTQH*DPMCHP
Trigger: AGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTG...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR GCA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 2 (lower is better)
Translates to: NIYWVNVSISRMANPVPGSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR TCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTTTATCCTTCAAGGGTaGGTTCTGATTCACCTTGTC +
Preference number: 2 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHFILQG*VLIHLV
Trigger: GACAAGGTGAATCAGAACTCACCCTTGAAGGATAAA...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR-3UTR CAA 90 bp GCAGGGCGTACTCAGCGTCGTCCAGGCCCAGCCGCCGCATGGCCCGCGAGAACTCGGCCCAGCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 3 (lower is better)
Translates to: AGRTQRRPGPAAAWPARTRPSVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGCTGGGCCG...AGTTCTCGCGGGCCATGCGGCGGCTGGGCCTGGACGACGCTGAGTACGCCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CAA 90 bp GCAGGGCGTACTCAGCGTCGTCCAGGCCCAGCCGCCGCATGGCCCGCGAGAACTTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 3 (lower is better)
Translates to: AGRTQRRPGPAAAWPARTFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...AGTTCTCGCGGGCCATGCGGCGGCTGGGCCTGGACGACGCTGAGTACGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR TCA 72 bp GCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: ASWTWTGAYPKG*EPIGLQARPRA
Trigger: GGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR GCA 72 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCTGGAAGACTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: REGSREGSVVGT*NPFTPSGRLAG
Trigger: CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
3UTR GCA 72 bp GGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTCAGCGTGCGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: GSFLSWSRKAKT*SECTELSVRRL
Trigger: GAGCCTGCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR CCA 72 bp GCGATCTGGTCCTCCCGGCCCAGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGG +
Preference number: 3 (lower is better)
Translates to: AIWSSRPSVTLG*SEKERLLHCSW
Trigger: CCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCTGGGCCGGGAGGACCAGATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR CCA 72 bp CTGAACTTTCACAGCAGGCGACACACCACCCAACACTaGGACCCTATGTGCCACCCTTTTCCCAACAGCCTG +
Preference number: 3 (lower is better)
Translates to: LNFHSRRHTTQH*DPMCHPFPNSL
Trigger: CAGGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCCTGCTGTGAAAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR GCA 72 bp ACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAACTGCTGGATCATTAGT +
Preference number: 3 (lower is better)
Translates to: TLGWSEKERLLH*SWAATNCWIIS
Trigger: ACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR-3UTR CAA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCGGCCTCAGCAAACACTaGTTGTTCGGACAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: NIYWVNVSISRMANPVPGGLSKH*LFGQKS
Trigger: GGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCC...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR TCA 72 bp TCACTTAAATCCTGTTTATCCTTCAAGGGTGAGTTCTaGTTCACCTTGTCCAGGGAGGTGACCCTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: SLKSCLSFKGEF*FTLSREVTLRL
Trigger: CAGCCTCAGGGTCACCTCCCTGGACAAGGTGAATCAGAACTCACCCTTGAAGGATAAACAGGATTTAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp ACAGCAGCGCCTCCACGTAGGGCTGCTGCAACGCCTCCACGCGGCCCGGCTCCTGCCCAGAGGCTGAGCTaGTGCTGCCCTGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TAAPPRRAAATPPRGPAPAQRLS*CCPAAP
Trigger: TGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGC...AGGAGCCGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTGGAGGCGCTGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCGGCGGGGCTCATGGCTaGGCGCGGGGGTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPGGAHG*ARGSRG
Trigger: TCCACGAGACCCCCGCGCGCAGCCATGAGCCCCGCC...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGGGCGGGGCTCATGGCTaGGCGCGGGGGTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGGGAHG*ARGSRG
Trigger: TCCACGAGACCCCCGCGCGCAGCCATGAGCCCCGCC...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCGGGCATCTCGGGACTaGGGGTCTGCGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGRASRD*GSAPRG
Trigger: GCCCCTGGGCGCAGACCCCCAGTCCCGAGATGCCCG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGGGCATCTCGGGACTaGGGGTCTGCGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGRASRD*GSAPRG
Trigger: GCCCCTGGGCGCAGACCCCCAGTCCCGAGATGCCCG...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCTGTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACAGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AVGLGGQPLTRGRPRSPTGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...TGTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp ACAGCAGCGCCTCCACGTAGGGCTGCTGCAACGCCTCCACGCGGCCCGGCTCCTCGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TAAPPRRAAATPPRGPAPRPLAE*TTPVAL
Trigger: CAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCG...AGGAGCCGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTGGAGGCGCTGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGGCCCAGAGGCTGAGCTaGTGCTGCCCTGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGAQRLS*CCPAAP
Trigger: TGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGC...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGGCCCAGAGGCTGAGCTaGTGCTGCCCTGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWAQRLS*CCPAAP
Trigger: TGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGC...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGCGCGCGGGGGTCTCGTaGACGGCCTCTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLRAGVS*TASRGV
Trigger: CACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCG...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ACAGCAGCGCCTCCACGTAGGGCTGCTGCAACGCCTCCACGCGGCCCGGCTCCTGGCCTCATCAGTGCCTaGGACATCAGGGTCCGGACC +
Preference number: 4 (lower is better)
Translates to: TAAPPRRAAATPPRGPAPGLISA*DIRVRT
Trigger: GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCC...AGGAGCCGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTGGAGGCGCTGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCGGCAGGCATAGCGCCTaGCCCCACCACGGACCACAC +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPGRHSA*PHHGPH
Trigger: GTGTGGTCCGTGGTGGGGCCAGGCGCTATGCCTGCC...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp TGTAGGACAGCAGCGCCTCCACGTAGGGCTGCTGCAACGCCTCCACGCGGCCCGCCTTCCCCGGAGCCCTaGCTGCCTGCCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: CRTAAPPRRAAATPPRGPPSPEP*LPASDP
Trigger: TGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGG...CGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTGGAGGCGCTGCTGTCCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGGGCGGGGCTCATGGCTaGGCGCGGGGGTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGGGAHG*ARGSRG
Trigger: TCCACGAGACCCCCGCGCGCAGCCATGAGCCCCGCC...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGGCGGGGCTCATGGCTaGGCGCGGGGGTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: GDTQSHLLNQVRAPSVTEGGAHG*ARGSRG
Trigger: TCCACGAGACCCCCGCGCGCAGCCATGAGCCCCGCC...CTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGAGCTGCTGCTGCCCTaGGGCCCCACAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPELLLP*GPTGDC
Trigger: GCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGGCCCAGAGGCTGAGCTaGTGCTGCCCTGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLAQRLS*CCPAAP
Trigger: TGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGC...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCGGAGCCCTGGCTGCCTaGCTCAGATCCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPGALAA*LRSTRG
Trigger: TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCC...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACAGCAGCGCCTCCACGTAGGGCTGCTGCAACGCCTCCACGCGGCCCGGCTCCTGAAAGGACGCCACACTaGGCCGGAAGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TAAPPRRAAATPPRGPAPERTPH*AGRSPC
Trigger: GCAAGGGCTTCTTCCGGCGCAGTGTGGCGTCCTTTC...AGGAGCCGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTGGAGGCGCTGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCACGCGCGGGGGTCTCGTaGACGGCCTCTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQARAGVS*TASRGV
Trigger: CACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCG...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGCGCGCGGGGGTCTCGTaGACGGCCTCTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRRAGVS*TASRGV
Trigger: CACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCG...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGGCAGGCATAGCGCCTaGCCCCACCACGGACCACAC +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGGRHSA*PHHGPH
Trigger: GTGTGGTCCGTGGTGGGGCCAGGCGCTATGCCTGCC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGCGGGCATCTCGGGACTaGGGGTCTGCGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GTPSPTCSIRFGHPVSLRRASRD*GSAPRG
Trigger: GCCCCTGGGCGCAGACCCCCAGTCCCGAGATGCCCG...CCTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSIGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR CAA 72 bp TGCTGCAACGCCTCCACGCGGCCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAGATGTTGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: CCNASTRPGSCT*GRSAEKMLMAM
Trigger: CATCGCCATCAACATCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGGCCGCGTGGAGGCGTTGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPRPLAE*TTPVAL
Trigger: CAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCGGCTCACCAGCTTCATaGGCATGCGCGGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPGSPAS*ACAGSA
Trigger: TGCGCTTCCCGCGCATGCTCATGAAGCTGGTGAGCC...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp TGTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACAGCACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CGAGWPAPHSWTSQISDSTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...GCTGTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCTGCCTCCTTGCACTTaGGCAGCCGGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGLPPCT*AAGTAG
Trigger: GCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTGCCTCCTTGCACTTaGGCAGCCGGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGLPPCT*AAGTAG
Trigger: GCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAG...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAGCCCAGAGGCTGAGCTaGTGCTGCCCTGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAAQRLS*CCPAAP
Trigger: TGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGC...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCCCCGGAGCCCTGGCTaGCTGCCTCAGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRPRSPG*LPQIHQ
Trigger: CTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCCCCCGGAGCCCTGGCTaGCTGCCTCAGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: RGGSFLSWSRKAKTCSECPRSPG*LPQIHQ
Trigger: CTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGG...GCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCCTCCCGGCCCAGCTaGAGGAAACCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPSSRPS*RKPGTC
Trigger: GCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGA...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGCTGTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACGCACAGAGCTCAGCGTaGGCAGGCTCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GCGAGWPAPHSWTSQISDAQSSA*AGSPAS
Trigger: TGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGC...GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCAGCCTGTCCCCCTTaGGCGGGAAAGTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPPACPP*AGKSSI
Trigger: GATGGAGGACTTTCCCGCGCAAGGGGGACAGGCTGG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCAGGCGGCAGGGCCTCTaGACACAGGACGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPRRQGL*TQDAEY
Trigger: GTACTCAGCGTCCTGTGTGCAGAGGCCCTGCCGCCT...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCGCGCGGGGGTCTCGTaGACGGCCTCTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKRAGVS*TASRGV
Trigger: CACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCG...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GTGACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCCGCGCGGGGGTCTCGTaGACGGCCTCTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: VTLGWSEKERLLHCSWAARAGVS*TASRGV
Trigger: CACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCG...GGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGCGCGCGGGGGTCTCGTaGACGGCCTCTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGRERAGVS*TASRGV
Trigger: CACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCG...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCCCTTCCCCGGAGCCCTaGCTGCCTGCCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGPSPEP*LPASDP
Trigger: TGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGG...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCGGGCATCTCGGGACTaGGGGTCTGCGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKRASRD*GSAPRG
Trigger: GCCCCTGGGCGCAGACCCCCAGTCCCGAGATGCCCG...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCCGGCTCCTGCACGTTaGGCCGGTCGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKPAPAR*AGRPRR
Trigger: TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTCCGGCTCCTGCACGTTaGGCCGGTCGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AEAAASCPGAARRRPAPSPAPAR*AGRPRR
Trigger: TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGG...ACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCCGGCTCCTGCACGTTaGGCCGGTCGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRPAPAR*AGRPRR
Trigger: TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCGCGGGAAGCGCAGCTaGTCCTGCGGCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPRGKRS*SCGLLM
Trigger: CATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCG...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCGCGGGAAGCGCAGCTaGTCCTGCGGCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGRGKRS*SCGLLM
Trigger: CATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCCAGCCCCTCACTCGTaGACGTCCCAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPPAPHS*TSQISD
Trigger: GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGG...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCAGCCCCTCACTCGTaGACGTCCCAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPPAPHS*TSQISD
Trigger: GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCGCCGGGAAGGGTCAGTaGTCGGGACCTGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPAGKGQ*SGPATL
Trigger: AAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGC...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGRPLAE*TTPVAL
Trigger: CAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGGGCTCACCAGCTTCATaGGCATGCGCGGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGGSPAS*ACAGSA
Trigger: TGCGCTTCCCGCGCATGCTCATGAAGCTGGTGAGCC...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCATCCCTGCCTCCTTaGACTTGCGCAGCCGGCACT +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPSSLPP*TCAAGT
Trigger: AGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGA...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCTCATCCCTGCCTCCTTaGACTTGCGCAGCCGGCACT +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPSSLPP*TCAAGT
Trigger: AGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGA...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPGPTGD*DCDCDS
Trigger: GGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCC...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGCTGCTGCTGCCCTaGGGCCCCACAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLELLLP*GPTGDC
Trigger: GCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTC...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAGAGCTGCTGCTGCCCTaGGGCCCCACAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAELLLP*GPTGDC
Trigger: GCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTC...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCGAGCTGCTGCTGCCCTaGGGCCCCACAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGELLLP*GPTGDC
Trigger: GCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTC...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGGCCCAGAGGCTGAGCTaGTGCTGCCCTGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKAQRLS*CCPAAP
Trigger: TGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGC...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGGGAGCCCTGGCTGCCTaGCTCAGATCCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGGALAA*LRSTRG
Trigger: TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCC...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCACCCCGGAGCCCTGGCTaGCTGCCTCAGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAPRSPG*LPQIHQ
Trigger: CTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGG...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCCCCGGAGCCCTGGCTaGCTGCCTCAGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKPRSPG*LPQIHQ
Trigger: CTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGCTGTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: GCGAGWPAPHSWTSQISDERLLH*SWAATN
Trigger: GTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTC...GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCAAGACCTGCTCCGAGTaGACAGAGCTCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPKTCSE*TELSVR
Trigger: GCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTT...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGGCGCCCTCTCCATCTTaGACTCCAGCTCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLAPSPS*TPAPGW
Trigger: CCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGAGCTCAGCGTGCGCAGGCTCAGGACCAGCCGAAGCTaGTGCCCCGCACGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SRKAKTCSECTELSVRRLRTSRS*CPARKL
Trigger: CAACTTCCGTGCGGGGCAGCAGCTTCGGCTGGTCCT...GAGCCTGCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTCGGCAACCCCGCCCTTaGGTCACGTCCGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLRQPRP*VTSGRG
Trigger: CCCTCTTCCGGACGTGACGCAAGGGCGGGGTTGCCG...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGGCCTCATCAGTGCCTaGGACATCAGGGTCCGGACC +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGGLISA*DIRVRT
Trigger: GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGGGCCTCATCAGTGCCTaGGACATCAGGGTCCGGACC +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGGLISA*DIRVRT
Trigger: GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCC...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCAGCATCTTCGGGGCTaGGCCCTTCTTTCGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPQHLRG*ALLSLA
Trigger: CGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCACACGGCAAAGCTCGTaGCCCAGCATCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPTRQSS*PSIFGA
Trigger: AGCCCCGAAGATGCTGGGCCACGAGCTTTGCCGTGT...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGGGCAGGCATAGCGCCTaGCCCCACCACGGACCACAC +
Preference number: 4 (lower is better)
Translates to: GTPSPTCSIRFGHPVSLRGRHSA*PHHGPH
Trigger: GTGTGGTCCGTGGTGGGGCCAGGCGCTATGCCTGCC...CCTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGGGCAGGCATAGCGCCTaGCCCCACCACGGACCACAC +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGGRHSA*PHHGPH
Trigger: GTGTGGTCCGTGGTGGGGCCAGGCGCTATGCCTGCC...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGCCTTCCCCGGAGCCCTaGCTGCCTGCCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGPSPEP*LPASDP
Trigger: TGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGG...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GTTGGGCCGGTCGGCCGAGAAGATGTTGATGGCGATGAGCAGGGCGTACTCAGCGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: VGPVGREDVDGDEQGVLSGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...GCTGAGTACGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGACCGGCCCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGCCGGCTCCTGCACGTTaGGCCGGTCGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVPAPAR*AGRPRR
Trigger: TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGG...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCGCGGGAAGCGCAGCTaGTCCTGCGGCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRRGKRS*SCGLLM
Trigger: CATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCCCAGCCCCTCACTCGTaGACGTCCCAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGPAPHS*TSQISD
Trigger: GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGG...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GTPSPTCSIRFGHPVSLRARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...CCTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGCCGGGAAGGGTCAGTaGTCGGGACCTGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGAGKGQ*SGPATL
Trigger: AAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCAACGCCTCCACGCGGCCCGGCTCCTGCACGTTGGGCCGGTCGGCCGAGAAGAGCCCCGCACGGAAGTTaGAAACTCACCGGAAGTTTA +
Preference number: 4 (lower is better)
Translates to: ATPPRGPAPARWAGRPRRAPHGS*KLTGSL
Trigger: TAAACTTCCGGTGAGTTTCCAACTTCCGTGCGGGGC...TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGGCCGCGTGGAGGCGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGGGTGAGGTCCCAGTCTaGTGGGTACGGGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGGEVPV*WVRAGK
Trigger: CTTCCCAGCCCGTACCCACCAGACTGGGACCTCACC...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652203.1
3UTR CAA 72 bp GGCTCCTGCACGTTGGGCCGGTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCGTACTCAGCGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GSCTLGRSAEKM*MAMSRAYSASS
Trigger: GGACGACGCTGAGTACGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLRPLAE*TTPVAL
Trigger: CAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGCACTTGCGCCGCATaGAAGCGTCCATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKGTCAA*KRPSGR
Trigger: CCTGCCAGATGGACGCTTTCATGCGGCGCAAGTGCC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGGGTCCTGCGGCCTCTTaGTGCGCGTGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGGPAAS*CACRTA
Trigger: TGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACC...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCGGTCCTGCGGCCTCTTaGTGCGCGTGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSIGPAAS*CACRTA
Trigger: TGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACC...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGGGCTCACCAGCTTCATaGGCATGCGCGGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGGSPAS*ACAGSA
Trigger: TGCGCTTCCCGCGCATGCTCATGAAGCTGGTGAGCC...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGCTCACCAGCTTCATaGGCATGCGCGGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKGSPAS*ACAGSA
Trigger: TGCGCTTCCCGCGCATGCTCATGAAGCTGGTGAGCC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTAATCGCTGGAACCCGTaGGGCGGAGGTTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPNRWNP*GGGCSE
Trigger: CTCACTGCAACCTCCGCCTCACGGGTTCCAGCGATT...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGAATCGCTGGAACCCGTaGGGCGGAGGTTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGNRWNP*GGGCSE
Trigger: CTCACTGCAACCTCCGCCTCACGGGTTCCAGCGATT...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGCTGCTCCCTCATCCCTaGCTCCTTGCACTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWLLPHP*LLALAQ
Trigger: CTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAG...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGAGCTCAGCGTGCGCAGGCTCGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SRKAKTCSECTELSVRRLGPTGD*DCDCDS
Trigger: GGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCC...GAGCCTGCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCGGAGCCCTGGCTGCCTaGCTCAGATCCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGGALAA*LRSTRG
Trigger: TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCC...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCCCCGGAGCCCTGGCTaGCTGCCTCAGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRPRSPG*LPQIHQ
Trigger: CTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPERLLH*SWAATN
Trigger: GTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTC...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGTGGGCAAAGCGTTaGTGGCGGGCATCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWKWAKR*WRASRD
Trigger: GTCCCGAGATGCCCGCCAGCAACGCTTTGCCCACTT...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGTCCTCCCGGCCCAGCTaGAGGAAACCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGSSRPS*RKPGTC
Trigger: GCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGA...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGTCCTCCCGGCCCAGCTaGAGGAAACCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRSSRPS*RKPGTC
Trigger: GCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGA...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGCACAGAGCTCAGCGTaGGCAGGCTCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPAQSSA*AGSPAS
Trigger: TGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGAAGACCTGCTCCGAGTaGACAGAGCTCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGKTCSE*TELSVR
Trigger: GCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTT...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGAAGACCTGCTCCGAGTaGACAGAGCTCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGKTCSE*TELSVR
Trigger: GCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTT...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGRKAKT*SECTEL
Trigger: GAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCG...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGGGACGCCCCAGTCTGTaGTGCAGGCTGAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKGRPSL*CRLSWP
Trigger: AGGCCAGCTCAGCCTGCAGCACAGACTGGGGCGTCC...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411902.6
CDS-3UTR GCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGTCTACACTGCGACTCTaGGGATGGTGGCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGSTLRL*GWWPGG
Trigger: TCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGA...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGCCTCATCAGTGCCTaGGACATCAGGGTCCGGACC +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKGLISA*DIRVRT
Trigger: GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGCCTCATCAGTGCCTaGGACATCAGGGTCCGGACC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRGLISA*DIRVRT
Trigger: GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCC...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGCAGCATCTTCGGGGCTaGGCCCTTCTTTCGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWQHLRG*ALLSLA
Trigger: CGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTG...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGACACGGCAAAGCTCGTaGCCCAGCATCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWTRQSS*PSIFGA
Trigger: AGCCCCGAAGATGCTGGGCCACGAGCTTTGCCGTGT...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGATGAAAGCGTCCATCTaGCAGGTTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGMKASI*QVPPPR
Trigger: CCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCAT...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCATGAAAGCGTCCATCTaGCAGGTTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGMKASI*QVPPPR
Trigger: CCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCAT...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGATGAAAGCGTCCATCTaGCAGGTTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWMKASI*QVPPPR
Trigger: CCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCAT...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCCTTCCCCGGAGCCCTaGCTGCCTGCCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKPSPEP*LPASDP
Trigger: TGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGCCTTCCCCGGAGCCCTaGCTGCCTGCCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRPSPEP*LPASDP
Trigger: TGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGG...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGTGGGCAAAGCGTTGCTaGCGGGCATCTCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKWAKRC*RASRDW
Trigger: CCAGTCCCGAGATGCCCGCCAGCAACGCTTTGCCCA...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCCAGCTCCGTGAAGTaGGCAAAGCGTTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKASSVK*AKRCWR
Trigger: CCGCCAGCAACGCTTTGCCCACTTCACGGAGCTGGC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCCGGCTCCTGCACGTTaGGCCGGTCGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSPAPAR*AGRPRR
Trigger: TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGG...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGCCGGCTCCTGCACGTTaGGCCGGTCGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQPAPAR*AGRPRR
Trigger: TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGG...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACCGGCTCCTGCACGTTaGGCCGGTCGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRPAPAR*AGRPRR
Trigger: TCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGG...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGCGCGGGAAGCGCAGCTaGTCCTGCGGCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGRGKRS*SCGLLM
Trigger: CATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCG...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGCCAGCCCCTCACTCGTaGACGTCCCAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLPAPHS*TSQISD
Trigger: GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGG...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCCAGCCCCTCACTCGTaGACGTCCCAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKPAPHS*TSQISD
Trigger: GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTGGTCAGGCAAGGCTGTaGGGCTGGGTGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSGQARL*GWVASP
Trigger: GGGGCTGGCCACCCAGCCCCACAGCCTTGCCTGACC...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGGCCGGGAAGGGTCAGTaGTCGGGACCTGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLAGKGQ*SGPATL
Trigger: AAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGC...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCTTTTCCCAACAGCCTaGGGACACCCAGTCCCACCT +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPLFPTA*GHPVPP
Trigger: AGGTGGGACTGGGTGTCCCCAGGCTGTTGGGAAAAG...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGGGCCAACCCAGTGCCTaGCCCACAGGAGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREGQPSA*PTGGLS
Trigger: GCTGAGGCCTCCTGTGGGCCAGGCACTGGGTTGGCC...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCCGGTTTCCAGGCCCTaGATGTCCCTCCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCPVSRP*MSLRLQ
Trigger: CTGCAGGCGGAGGGACATCCAGGGCCTGGAAACCGG...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCAAATGGCCGTCCTTGTaGCCGCGACACCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPKWPSL*PRHPVV
Trigger: GACAACTGGGTGTCGCGGCCACAAGGACGGCCATTT...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGGGGCTCCCAGGCAAATaGCCGTCCTTGTGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVGLPGK*PSLWPR
Trigger: TCGCGGCCACAAGGACGGCCATTTGCCTGGGAGCCC...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCCGGATGGTGGCCGGGTaGAGGGAGACGATCATGCAG +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSIRMVAG*RETIMQ
Trigger: CTGCATGATCGTCTCCCTCCACCCGGCCACCATCCG...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTCGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLRPLAE*TTPVAL
Trigger: CAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCG...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGCGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGRPLAE*TTPVAL
Trigger: CAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCG...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCTCCTTTACAGTGGGTaGAGAAGAAGGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGLLYSG*RRRGAR
Trigger: CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGCTCCTTTACAGTGGGTaGAGAAGAAGGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWLLYSG*RRRGAR
Trigger: CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAG...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTCCTTTACAGTGGGTaGAGAAGAAGGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGLLYSG*RRRGAR
Trigger: CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAG...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAGGTCCTGCGGCCTCTTaGTGCGCGTGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAGPAAS*CACRTA
Trigger: TGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACC...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGCTCACCAGCTTCATaGGCATGCGCGGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCGSPAS*ACAGSA
Trigger: TGCGCTTCCCGCGCATGCTCATGAAGCTGGTGAGCC...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCAGCTGGCCTCATCAGTaGCTGGGACATCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSISWPHQ*LGHQGP
Trigger: CGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCT...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGAGCTGGCCTCATCAGTaGCTGGGACATCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGSWPHQ*LGHQGP
Trigger: CGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCT...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGGGCCCTTCTTTCGCTTaGGCTCTGGTTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWGPSFA*ALVPLR
Trigger: CCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCC...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGGCCCTTCTTTCGCTTaGGCTCTGGTTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGGPSFA*ALVPLR
Trigger: CCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCACCACGGACCACACTaGGCCGGAAGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGHHGPH*AGRSPC
Trigger: GCAAGGGCTTCTTCCGGCGCAGTGTGGTCCGTGGTG...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCACACCACGGACCACACTaGGCCGGAAGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAHHGPH*AGRSPC
Trigger: GCAAGGGCTTCTTCCGGCGCAGTGTGGTCCGTGGTG...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGCACCACGGACCACACTaGGCCGGAAGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGHHGPH*AGRSPC
Trigger: GCAAGGGCTTCTTCCGGCGCAGTGTGGTCCGTGGTG...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTGCCTCCTTGCACTTaGGCAGCCGGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRLPPCT*AAGTAG
Trigger: GCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAG...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGCTGCTCCCTCATCCCTaGCTCCTTGCACTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLLLPHP*LLALAQ
Trigger: CTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAG...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCTGCTCCCTCATCCCTaGCTCCTTGCACTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKLLPHP*LLALAQ
Trigger: CTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRGPTGD*DCDCDS
Trigger: GGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCC...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGGGAGCCCTGGCTGCCTaGCTCAGATCCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREGALAA*LRSTRG
Trigger: TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCC...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGAGCCCTGGCTGCCTaGCTCAGATCCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQGALAA*LRSTRG
Trigger: TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCC...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGGGAGCCCTGGCTGCCTaGCTCAGATCCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKGALAA*LRSTRG
Trigger: TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCC...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPERLLH*SWAATN
Trigger: GTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGAAGTGGGCAAAGCGTTaGTGGCGGGCATCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRKWAKR*WRASRD
Trigger: GTCCCGAGATGCCCGCCAGCAACGCTTTGCCCACTT...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCTTGATGAACTCCACCTaGAGGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPLMNST*RPARWK
Trigger: CTTCCACCGTGCAGGCCTGCAGGTGGAGTTCATCAA...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGCACAGAGCTCAGCGTaGGCAGGCTCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRAQSSA*AGSPAS
Trigger: TGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGC...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGGCACAGAGCTCAGCGTaGGCAGGCTCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGAQSSA*AGSPAS
Trigger: TGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGC...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGAAGACCTGCTCCGAGTaGACAGAGCTCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGKTCSE*TELSVR
Trigger: GCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTT...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGAAGACCTGCTCCGAGTaGACAGAGCTCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLKTCSE*TELSVR
Trigger: GCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTT...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGCGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGRKAKT*SECTEL
Trigger: GAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCG...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CGGCCTCTTGATGCGCGTGTAGGACAGCAGCGCCTCCACGTAGGGCTGCTGCAACGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPLDARVGQQRLHVGLLQRKAKT*SECTEL
Trigger: GAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCG...TTGCAGCAGCCCTACGTGGAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GCCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: AWGHPVPPAQSGSGTQCHVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...GTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCGCGCCCTCTCCATCTTaGACTCCAGCTCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTAAPSPS*TPAPGW
Trigger: CCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCGGATGTCCCTCCGCCTaGAGGGCCCTTCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGGCPSA*RALLDP
Trigger: AGGATCCAGAAGGGCCCTGCAGGCGGAGGGACATCC...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCTCCTCCTTTACAGTaGGTGAAGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPPPPLQ*VKKKGR
Trigger: GCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGGGCCTCATCAGTGCCTaGGACATCAGGGTCCGGACC +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGGLISA*DIRVRT
Trigger: GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCC...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGCAGCATCTTCGGGGCTaGGCCCTTCTTTCGCTTGCG +
Preference number: 4 (lower is better)
Translates to: AAASCPGAARRRPAPSAQQHLRG*ALLSLA
Trigger: CGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTG...CTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCAGCATCTTCGGGGCTaGGCCCTTCTTTCGCTTGCG +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKQHLRG*ALLSLA
Trigger: CGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CAGCTGGTCCTGCGGCCTCTTGATGCGCGTGTAGGACAGCAGCGCCTCCACGTAACACGGCAAAGCTCGTaGCCCAGCATCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QLVLRPLDARVGQQRLHVTRQSS*PSIFGA
Trigger: AGCCCCGAAGATGCTGGGCCACGAGCTTTGCCGTGT...TACGTGGAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGACACGGCAAAGCTCGTaGCCCAGCATCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRTRQSS*PSIFGA
Trigger: AGCCCCGAAGATGCTGGGCCACGAGCTTTGCCGTGT...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACACACGGCAAAGCTCGTaGCCCAGCATCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: AWGHPVPPAQSGSGTQCHTRQSS*PSIFGA
Trigger: AGCCCCGAAGATGCTGGGCCACGAGCTTTGCCGTGT...GTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGATGAAAGCGTCCATCTaGCAGGTTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLMKASI*QVPPPR
Trigger: CCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCAT...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGATGAAAGCGTCCATCTaGCAGGTTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLMKASI*QVPPPR
Trigger: CCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCAT...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCGCAGCCGGCACTGCTaGCACTTGCGCCGCATGAAA +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKRSRHC*HLRRMK
Trigger: TTTCATGCGGCGCAAGTGCCAGCAGTGCCGGCTGCG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGCGCAGCCGGCACTGCTaGCACTTGCGCCGCATGAAA +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVRSRHC*HLRRMK
Trigger: TTTCATGCGGCGCAAGTGCCAGCAGTGCCGGCTGCG...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCCTTCCCCGGAGCCCTaGCTGCCTGCCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSPSPEP*LPASDP
Trigger: TGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGG...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPGVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGTGGGCAAAGCGTTGCTaGCGGGCATCTCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKWAKRC*RASRDW
Trigger: CCAGTCCCGAGATGCCCGCCAGCAACGCTTTGCCCA...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGCCAGCTCCGTGAAGTaGGCAAAGCGTTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCASSVK*AKRCWR
Trigger: CCGCCAGCAACGCTTTGCCCACTTCACGGAGCTGGC...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACGCGGGAAGCGCAGCTaGTCCTGCGGCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRRGKRS*SCGLLM
Trigger: CATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCG...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCCAGCCCCTCACTCGTaGACGTCCCAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCPAPHS*TSQISD
Trigger: GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGG...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GTPSPTCSIRFGHPVSLRPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CCTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AEAAASCPGAARRRPAPSPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...ACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTGGCCAACCCAGTGCCTaGCCCACAGGAGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSGQPSA*PTGGLS
Trigger: GCTGAGGCCTCCTGTGGGCCAGGCACTGGGTTGGCC...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCTGCGACTCTGCGGATaGTGGCCGGGTGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRLRLCG*WPGGGR
Trigger: TCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp CCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGTCCCAGTCTGGTaGGTACGGGCTGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PGDTQSHLLNQVRAPSVTEVPVW*VRAGKA
Trigger: AGCCTTCCCAGCCCGTACCCACCAGACTGGGACCTC...AGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGCTCCTCTTTAGCCCCTaGCACACCGCCGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLLLFSP*HTAATQ
Trigger: TTGAGTAGCGGCGGTGTGTCAGGGGCTAAAGAGGAG...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR TCA 90 bp GCCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACCTCCTTTACAGTGGGTaGAGAAGAAGGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AWGHPVPPAQSGSGTQCHLLYSG*RRRGAR
Trigger: CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAG...GTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCTCCTTTACAGTGGGTaGAGAAGAAGGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRLLYSG*RRRGAR
Trigger: CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGGGCACTTGCGCCGCATaGAAGCGTCCATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQGTCAA*KRPSGR
Trigger: CCTGCCAGATGGACGCTTTCATGCGGCGCAAGTGCC...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGGCACTTGCGCCGCATaGAAGCGTCCATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRGTCAA*KRPSGR
Trigger: CCTGCCAGATGGACGCTTTCATGCGGCGCAAGTGCC...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCCACGATCTCCTGGACTaGGATGATGGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSIHDLLD*DDGQLR
Trigger: ACGGAGCTGGCCATCATCTCAGTCCAGGAGATCGTG...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCACGATCTCCTGGACTaGGATGATGGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLHDLLD*DDGQLR
Trigger: ACGGAGCTGGCCATCATCTCAGTCCAGGAGATCGTG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGGGTCCTGCGGCCTCTTaGTGCGCGTGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREGPAAS*CACRTA
Trigger: TGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACC...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGTCCTGCGGCCTCTTaGTGCGCGTGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQGPAAS*CACRTA
Trigger: TGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACC...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGGTCCTGCGGCCTCTTaGTGCGCGTGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRGPAAS*CACRTA
Trigger: TGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACC...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGAACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CGGCCTCTTGATGCGCGTGTAGGACAGCAGCGCCTCCACGTAGGGCTGCTGCAAGCGGAGCGTGAAACTTaGCGAACTTCCGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: RPLDARVGQQRLHVGLLQAERET*RTSGPL
Trigger: AAGCGGACCGGAAGTTCGTCAAGTTTCACGCTCCGC...TTGCAGCAGCCCTACGTGGAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGAGTCCACGATCTCCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGSPRSP*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGGAGATCGTGGACT...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598168.5
CDS-3UTR GCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGAGCTGGCCTCATCAGTaGCTGGGACATCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRSWPHQ*LGHQGP
Trigger: CGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCT...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGCTGGCCTCATCAGTaGCTGGGACATCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKSWPHQ*LGHQGP
Trigger: CGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCT...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGCTGGCCTCATCAGTaGCTGGGACATCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQASWPHQ*LGHQGP
Trigger: CGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCT...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTTCATCCCTGCCTCCTTaGACTTGCGCAGCCGGCACT +
Preference number: 4 (lower is better)
Translates to: PGDTQSHLLNQVRAPSVTSSLPP*TCAAGT
Trigger: AGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGA...AGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCTGCTCCCTCATCCCTaGCTCCTTGCACTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGLLPHP*LLALAQ
Trigger: CTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAG...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKGPTGD*DCDCDS
Trigger: GGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCC...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRERLLH*SWAATN
Trigger: GTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTC...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGAGCTCAGCGTGCGAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VLEPQGEDLLRVHRAQRARRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...CGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAAGTGGGCAAAGCGTTaGTGGCGGGCATCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAKWAKR*WRASRD
Trigger: GTCCCGAGATGCCCGCCAGCAACGCTTTGCCCACTT...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGTCCTCCCGGCCCAGCTaGAGGAAACCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKSSRPS*RKPGTC
Trigger: GCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGA...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCGATCTCGATAGTGGATaGCTTCAGGAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPDLDSG*LQEGDL
Trigger: CAGATCGCCCTCCTGAAGGCATCCACTATCGAGATC...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGATGAACTCCACCTaGAGGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGLMNST*RPARWK
Trigger: CTTCCACCGTGCAGGCCTGCAGGTGGAGTTCATCAA...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGCACAGAGCTCAGCGTaGGCAGGCTCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCAQSSA*AGSPAS
Trigger: TGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGC...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGGCACAGAGCTCAGCGTaGGCAGGCTCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGAQSSA*AGSPAS
Trigger: TGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGC...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAAGACCTGCTCCGAGTaGACAGAGCTCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAKTCSE*TELSVR
Trigger: GCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTT...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCRKAKT*SECTEL
Trigger: GAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCG...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAGTGCCGGCGTCTATCTaGTGGAGGGTGGTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAVPASI*WRVVRQ
Trigger: TTGCCTGACCACCCTCCAGCAGATAGACGCCGGCAC...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTCCACGTGTCTACACTaGGACTCTGCGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSISTCLH*DSADGG
Trigger: GCCACCATCCGCAGAGTCGCAGTGTAGACACGTGGA...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR GCA 90 bp GCCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACCAGAGCAAGACTTCGTaGCAGTCACGGTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AWGHPVPPAQSGSGTQCHQSKTS*QSRSLP
Trigger: AGGCAGGGACCGTGACTGGCACGAAGTCTTGCTCTG...GTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCCCTCCTCCTTTACAGTaGGTGAAGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGPPPLQ*VKKKGR
Trigger: GCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGG...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWLSLAL*FLFGIW
Trigger: CCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAG...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCAGCATCTTCGGGGCTaGGCCCTTCTTTCGCTTGCG +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKQHLRG*ALLSLA
Trigger: CGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCCGCAGCCGGCACTGCTaGCACTTGCGCCGCATGAAA +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTARSRHC*HLRRMK
Trigger: TTTCATGCGGCGCAAGTGCCAGCAGTGCCGGCTGCG...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGCGCAGCCGGCACTGCTaGCACTTGCGCCGCATGAAA +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQRSRHC*HLRRMK
Trigger: TTTCATGCGGCGCAAGTGCCAGCAGTGCCGGCTGCG...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTTTGTTGCACTGCAGTTaGGCCGCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: AEAAASCPGAARRRPAPSLLHCS*AATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAA...ACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGGGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGGVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCC...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCTGGGCAAAGCGTTGCTaGCGGGCATCTCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTAWAKRC*RASRDW
Trigger: CCAGTCCCGAGATGCCCGCCAGCAACGCTTTGCCCA...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGCCAGCTCCGTGAAGTaGGCAAAGCGTTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQASSVK*AKRCWR
Trigger: CCGCCAGCAACGCTTTGCCCACTTCACGGAGCTGGC...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCCCTTTCACCCCTTCTaGAAGACTCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKPFHPF*KTRWAG
Trigger: CCCTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGAGCCGGGAAGGGTCAGTaGTCGGGACCTGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRAGKGQ*SGPATL
Trigger: AAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGC...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTGCAGACTACTCGAAATaGCGTCCGCCTCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPADYSK*RPPLLV
Trigger: GACAAGCAGAGGCGGACGCCATTTCGAGTAGTCTGC...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
3UTR CAA 72 bp CCCAGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVTLGWSEKER*LHCSWAATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp CCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTCTCCTCTTTAGCCCCTaGCACACCGCCGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: PGDTQSHLLNQVRAPSVTLLFSP*HTAATQ
Trigger: TTGAGTAGCGGCGGTGTGTCAGGGGCTAAAGAGGAG...AGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253727.10
CDS-3UTR TCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCACTCCTTTACAGTGGGTaGAGAAGAAGGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQALLYSG*RRRGAR
Trigger: CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAG...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTGGCACTTGCGCCGCATaGAAGCGTCCATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSGTCAA*KRPSGR
Trigger: CCTGCCAGATGGACGCTTTCATGCGGCGCAAGTGCC...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCACGATCTCCTGGACTaGGATGATGGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCHDLLD*DDGQLR
Trigger: ACGGAGCTGGCCATCATCTCAGTCCAGGAGATCGTG...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR TCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCACGATCTCCTGGACTaGGATGATGGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGHDLLD*DDGQLR
Trigger: ACGGAGCTGGCCATCATCTCAGTCCAGGAGATCGTG...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGCTGAGGCCTCTGTCCTaGACTTTCACAGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRLRPLS*TFTAGD
Trigger: GTCGCCTGCTGTGAAAGTTCAGGACAGAGGCCTCAG...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGATTCATGCGCTTCTCTaGGCCTGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGIHALL*ACSPSY
Trigger: GTAGCTGGGACTACAGGCTCAGAGAAGCGCATGAAT...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTAAGAGGGGCGGAGCGTaGAACTTGACGAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCKRGGA*NLTNFR
Trigger: CCGGAAGTTCGTCAAGTTTCACGCTCCGCCCCTCTT...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGTGCCCTGGGTTCCCTTaGTCTGCTTTTCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGCPGFP*SAFLRP
Trigger: AGGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCA...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR GCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGAAGCTGGCCTCATCAGTaGCTGGGACATCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRSWPHQ*LGHQGP
Trigger: CGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCT...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGCCCTTCTTTCGCTTaGGCTCTGGTTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCGPSFA*ALVPLR
Trigger: CCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCC...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGGGCCCTTCTTTCGCTTaGGCTCTGGTTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVGPSFA*ALVPLR
Trigger: CCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCC...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGTCATCCCTGCCTCCTTaGACTTGCGCAGCCGGCACT +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGRESSLPP*TCAAGT
Trigger: AGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGA...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGTCATCCCTGCCTCCTTaGACTTGCGCAGCCGGCACT +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKSSLPP*TCAAGT
Trigger: AGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGA...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGTCAGAAAGGACGCACTaGTCCCTCATCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GDTQSHLLNQVRAPSVTESERTH*SLIPAS
Trigger: GGAGGCAGGGATGAGGGAGCAGTGCGTCCTTTCTGA...CTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGTCAGAAAGGACGCACTaGTCCCTCATCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGSERTH*SLIPAS
Trigger: GGAGGCAGGGATGAGGGAGCAGTGCGTCCTTTCTGA...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSGPTGD*DCDCDS
Trigger: GGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCC...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRGPTGD*DCDCDS
Trigger: GGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCC...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKERLLH*SWAATN
Trigger: GTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTC...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCERLLH*SWAATN
Trigger: GTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTC...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRRRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGRRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLRRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGAAGTGGGCAAAGCGTTaGTGGCGGGCATCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREKWAKR*WRASRD
Trigger: GTCCCGAGATGCCCGCCAGCAACGCTTTGCCCACTT...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGATCTCGATAGTGGATaGCTTCAGGAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGDLDSG*LQEGDL
Trigger: CAGATCGCCCTCCTGAAGGCATCCACTATCGAGATC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGTTGATGAACTCCACCTaGAGGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGLMNST*RPARWK
Trigger: CTTCCACCGTGCAGGCCTGCAGGTGGAGTTCATCAA...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CAGCTGGTCCTGCGGCCTCTTGATGCGCGTGTAGGACAGCAGCGCCTCCACGTATTGATGAACTCCACCTaGAGGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QLVLRPLDARVGQQRLHVLMNST*RPARWK
Trigger: CTTCCACCGTGCAGGCCTGCAGGTGGAGTTCATCAA...TACGTGGAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACCAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGGCACAGAGCTCAGCGTaGGCAGGCTCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQAQSSA*AGSPAS
Trigger: TGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGC...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGAAGACCTGCTCCGAGTaGACAGAGCTCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSKTCSE*TELSVR
Trigger: GCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTT...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSRKAKT*SECTEL
Trigger: GAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCG...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGCGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQRKAKT*SECTEL
Trigger: GAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCG...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCACACCCAGTCCCACCTaGTCAATCAGGTTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGTPSPT*SIRFGH
Trigger: GTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGT...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCAGGTTTGCTTGGGACTaGGTAAGTCTAGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSIRFAWD*VSLGGR
Trigger: CCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCT...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp AGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGAGCTCAGCGTGCGCAGGCTCCTACTCCTGTTGCCCTaGGTTCCCTTGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SRKAKTCSECTELSVRRLLLLLP*VPLLCF
Trigger: AAAGCAGAGCAAGGGAACCCAGGGCAACAGGAGTAG...GAGCCTGCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCCTCCTCCTTTACAGTaGGTGAAGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLPPPLQ*VKKKGR
Trigger: GCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGTTCCTCTTCGGGATCTaGGATGACCCAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWFLFGI*DDPVCA
Trigger: AGCACAGACTGGGTCATCCCAGATCCCGAAGAGGAA...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRLSLAL*FLFGIW
Trigger: CCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCAGCATCTTCGGGGCTaGGCCCTTCTTTCGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKQHLRG*ALLSLA
Trigger: CGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTG...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCACACGGCAAAGCTCGTaGCCCAGCATCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTATRQSS*PSIFGA
Trigger: AGCCCCGAAGATGCTGGGCCACGAGCTTTGCCGTGT...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGTTGTTGCACTGCAGTTaGGCCGCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GDTQSHLLNQVRAPSVTELLHCS*AATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAA...CTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTTTGTTGCACTGCAGTTaGGCCGCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCLLHCS*AATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAA...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGCTCCTGGACCTGGACTaGGGCTTATCCCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVLLDLD*GLSQGM
Trigger: CATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAG...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTGGAGCCTCCTGGACCTaGACTGGGGCTTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: PGRVSGRDLQPFHPFWKTGASWT*TGAYPK
Trigger: CTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCC...AGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCTTTTCCCAACAGCCTaGGGACACCCAGTCCCACCT +
Preference number: 4 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGLFPTA*GHPVPP
Trigger: AGGTGGGACTGGGTGTCCCCAGGCTGTTGGGAAAAG...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GCTGTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACAAGATCTACTGGGACTTaGCAGAAGAGTTCCGAACCC +
Preference number: 4 (lower is better)
Translates to: AVGLGGQPLTRGRPRSPTRSTGT*QKSSEP
Trigger: GGGTTCGGAACTCTTCTGCCAAGTCCCAGTAGATCT...TGTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCTCCTCTTTAGCCCCTaGCACACCGCCGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRLLFSP*HTAATQ
Trigger: TTGAGTAGCGGCGGTGTGTCAGGGGCTAAAGAGGAG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR TCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTCCTCTTTAGCCCCTaGCACACCGCCGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKLLFSP*HTAATQ
Trigger: TTGAGTAGCGGCGGTGTGTCAGGGGCTAAAGAGGAG...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGTGCCCTGGGTTCCCTTaGTCTGCTTTTCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGCPGFP*SAFLRP
Trigger: AGGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCA...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR GCA 90 bp CGGCCTCTTGATGCGCGTGTAGGACAGCAGCGCCTCCACGTAGGGCTGCTGCAATGCCCTGGGTTCCCTTaGTCTGCTTTTCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RPLDARVGQQRLHVGLLQCPGFP*SAFLRP
Trigger: AGGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCA...TTGCAGCAGCCCTACGTGGAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATGGCGGGGCTCATGGCTaGGCGCGGGGGTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: APSPSCTPAPGWIVFIFYGGAHG*ARGSRG
Trigger: TCCACGAGACCCCCGCGCGCAGCCATGAGCCCCGCC...ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTAGCTGGCCTCATCAGTaGCTGGGACATCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSSWPHQ*LGHQGP
Trigger: CGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCT...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTGGCCCTTCTTTCGCTTaGGCTCTGGTTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: PGRVSGRDLQPFHPFWKTGPSFA*ALVPLR
Trigger: CCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCC...AGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTCTGCTCCCTCATCCCTaGCTCCTTGCACTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSLLPHP*LLALAQ
Trigger: CTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAG...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGTCAGAAAGGACGCACTaGTCCCTCATCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQSERTH*SLIPAS
Trigger: GGAGGCAGGGATGAGGGAGCAGTGCGTCCTTTCTGA...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTTCAGAAAGGACGCACTaGTCCCTCATCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGRVSGRDLQPFHPFWKTSERTH*SLIPAS
Trigger: GGAGGCAGGGATGAGGGAGCAGTGCGTCCTTTCTGA...AGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCGAGCTGCTGCTGCCCTaGGGCCCCACAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFELLLP*GPTGDC
Trigger: GCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTC...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATCCCCGGAGCCCTGGCTaGCTGCCTCAGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHPRSPG*LPQIHQ
Trigger: CTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGG...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGGAGCGTTTGTTGCACTaGAGTTGGGCCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQERLLH*SWAATN
Trigger: GTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTC...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGAGGAAACCAGGCACTTaGTTAGCGAAGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: EEGVPASICWRVVRQGCGRKPGT*LAKSTI
Trigger: GATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCT...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGTTGATGAACTCCACCTaGAGGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGLMNST*RPARWK
Trigger: CTTCCACCGTGCAGGCCTGCAGGTGGAGTTCATCAA...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGAGGAAGAGGAAGGGGTaGCGGCGTCTATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQRKRKG*RRLSAG
Trigger: TCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCT...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTCACTGGGACCCTATGTaGCACCCTTTTCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: PGDTQSHLLNQVRAPSVTHWDPM*HPFPNS
Trigger: GCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTG...AGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGATCCCTGGCAGTAGCTaGATGGCACAGAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: AAASCPGAARRRPAPSAQIPGSS*MAQREG
Trigger: ACCTTCTCTCTGTGCCATGCAGCTACTGCCAGGGAT...CTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCCTTTAATCATGCTCTaGCTTCACGGCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRPLIML*LHGLHA
Trigger: GGCATGGAGGCCGTGAAGGCAGAGCATGATTAAAGG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593926.5
CDS-3UTR CCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCTACTCCTGTTGCCCTaGGTTCCCTTGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLLLLLP*VPLLCF
Trigger: AAAGCAGAGCAAGGGAACCCAGGGCAACAGGAGTAG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253727.10
CDS-3UTR CCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGCTACTCCTGTTGCCCTaGGTTCCCTTGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGLLLLP*VPLLCF
Trigger: AAAGCAGAGCAAGGGAACCCAGGGCAACAGGAGTAG...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCTACTCCTGTTGCCCTaGGTTCCCTTGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRLLLLP*VPLLCF
Trigger: AAAGCAGAGCAAGGGAACCCAGGGCAACAGGAGTAG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCACCTCCTCCTTTACAGTaGGTGAAGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAPPPLQ*VKKKGR
Trigger: GCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGG...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGCCTCCTCCTTTACAGTaGGTGAAGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGPPPLQ*VKKKGR
Trigger: GCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGG...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGTTCCTCTTCGGGATCTaGGATGACCCAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRFLFGI*DDPVCA
Trigger: AGCACAGACTGGGTCATCCCAGATCCCGAAGAGGAA...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVLSLAL*FLFGIW
Trigger: CCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAG...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGLSLAL*FLFGIW
Trigger: CCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAG...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTTTGTTGCACTGCAGTTaGGCCGCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRVSGRDLQPFHPFWKTLLHCS*AATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAA...AGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGTTGTTGCACTGCAGTTaGGCCGCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRLLHCS*AATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAA...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGGGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKGVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCC...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTGGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: PGRVSGRDLQPFHPFWKTGVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCC...AGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGAAGTCCACGATCTCCTaGACTGAGATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKKSTIS*TEMMAS
Trigger: GCTGGCCATCATCTCAGTCCAGGAGATCGTGGACTT...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTGCAAGGCTGTGGGGCTaGGTGGCCAGCCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PRPLHLALQLRAGLYSYFARLWG*VASPSL
Trigger: GAGTGAGGGGCTGGCCACCCAGCCCCACAGCCTTGC...AAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCTATCTGCTGGAGGGTaGTCAGGCAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VGEGAFVALQLGRHQLLDLSAGG*SGKAVG
Trigger: CCCCACAGCCTTGCCTGACCACCCTCCAGCAGATAG...ATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCCACACCACCCAACACTaGGACCCTATGTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTAHTTQH*DPMCHP
Trigger: AGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTG...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGCACACCACCCAACACTaGGACCCTATGTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQHTTQH*DPMCHP
Trigger: AGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTG...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
3UTR CAA 72 bp AGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCCACCAACTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: SVTLGWSEKERL*HCSWAATNCWI
Trigger: GATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTCTCCTCTTTAGCCCCTaGCACACCGCCGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSLLFSP*HTAATQ
Trigger: TTGAGTAGCGGCGGTGTGTCAGGGGCTAAAGAGGAG...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR TCA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWWIISS*AAVSWT
Trigger: TGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCA...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GESHGSSPPSVQGALRAGWIISS*AAVSWT
Trigger: TGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCA...CCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGTCCAACATCATGAACTaGAGCATGCAAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AAASCPGAARRRPAPSAQSNIMN*SMQGPP
Trigger: TGGTGGCCCTTGCATGCTTCAGTTCATGATGTTGGA...CTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGCACACAGGACGCTaGGTACCCAGGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKLHTGR*VPRCSI
Trigger: TATTGAGCACCTGGGTACTCAGCGTCCTGTGTGCAG...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGAGGCACTGGACTTCGTaGCAGATAGTCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQRHWTS*QIVWRV
Trigger: CACCCTCCAGACTATCTGTCACGAAGTCCAGTGCCT...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGACGGGCTGGGAAGGCTaGTGGCAGTTTGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGRETGWEG*WQFDSE
Trigger: TTCACTGTCAAACTGCCATCAGCCTTCCCAGCCCGT...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTGCCCTGGGTTCCCTTaGTCTGCTTTTCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRCPGFP*SAFLRP
Trigger: AGGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCA...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR GCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATCTGCCTCCTTGCACTTaGGCAGCCGGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHLPPCT*AAGTAG
Trigger: GCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAG...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCGACTGTGACTCCTGCTaGTGTTTCCGAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGDCDSC*CFRIFF
Trigger: GAAGAAGATTCGGAAACAGCAGCAGGAGTCACAGTC...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SVTEVPRSPRPLHLALQLRRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...GAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTARRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGAGGAAACCAGGCACTTaGTTAGCGAAGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGRKPGT*LAKSTI
Trigger: GATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCT...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGATCTCGATAGTGGATaGCTTCAGGAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: PGDTQSHLLNQVRAPSVTDLDSG*LQEGDL
Trigger: CAGATCGCCCTCCTGAAGGCATCCACTATCGAGATC...AGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGATCTCGATAGTGGATaGCTTCAGGAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: EEEGVPASICWRVVRQGCDLDSG*LQEGDL
Trigger: CAGATCGCCCTCCTGAAGGCATCCACTATCGAGATC...ACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGGATCTCGATAGTGGATaGCTTCAGGAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVDLDSG*LQEGDL
Trigger: CAGATCGCCCTCCTGAAGGCATCCACTATCGAGATC...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGTTGATGAACTCCACCTaGAGGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRLMNST*RPARWK
Trigger: CTTCCACCGTGCAGGCCTGCAGGTGGAGTTCATCAA...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTASVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRRRSVCCTAVGPPPTAGSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...TCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGTCAGTGGTCGGGACCTaGAACCCTTTCACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRSVVGT*NPFTPS
Trigger: AGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGCTGTTCAAGGTGCACTaGGTGCTGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQLFKVH*VLGLRC
Trigger: ACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAG...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCACTGGGACCCTATGTaGCACCCTTTTCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSHWDPM*HPFPNS
Trigger: GCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTG...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCGGAGGGAGACGATCATaGAGGTTTGCTTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTAGGRRS*RFAWDC
Trigger: GCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCC...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp GGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGACCTCCTCCTTTACAGTaGGTGAAGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRRRSVCCTAVGPPPTAGPPPLQ*VKKKGR
Trigger: GCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGG...TCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp GGCGACACACCACCCAACACTGGGACCCTATGTGCCACCCTTTTCCCAACAGCCCCTCCTCCTTTACAGTaGGTGAAGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GDTPPNTGTLCATLFPTAPPPLQ*VKKKGR
Trigger: GCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGG...GGCTGTTGGGAAAAGGGTGGCACATAGGGTCCCAGTGTTGGGTGGTGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp AGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SVTEVPRSPRPLHLALQLLSLAL*FLFGIW
Trigger: CCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAG...GAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTAAGTCCACGATCTCCTaGACTGAGATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLKSTIS*TEMMAS
Trigger: GCTGGCCATCATCTCAGTCCAGGAGATCGTGGACTT...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp CCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTCGCGGGAAGCGCAGCTaGTCCTGCGGCCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PRPLHLALQLRAGLYSYFRGKRS*SCGLLM
Trigger: CATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCG...AAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CTGCAGGCCTGCACGGTGGAAGTCGTCCTTGCTGTAGGTGAAGTCCTTCAAGAACCAGCCCCTCACTCGTaGACGTCCCAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LQACTVEVVLAVGEVLQEPAPHS*TSQISD
Trigger: GTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGG...TTCTTGAAGGACTTCACCTACAGCAAGGACGACTTCCACCGTGCAGGCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGAGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGRESVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCT...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000599105.5
CDS-3UTR CCA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGATCCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRSVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGA...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598168.5
CDS-3UTR CCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGTCGGTGACGTCTTCTTaGGGACGTATGTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGRESVTSS*GRMWPS
Trigger: AGACGGCCACATACGTCCCCAAGAAGACGTCACCGA...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATGGCACTTGCGCCGCATaGAAGCGTCCATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHGTCAA*KRPSGR
Trigger: CCTGCCAGATGGACGCTTTCATGCGGCGCAAGTGCC...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKWIISS*AAVSWT
Trigger: TGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCA...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRWIISS*AAVSWT
Trigger: TGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCA...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GCAGAGGCGGCAGCTTCTTGTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: AEAAASCPGAARRRPAPSSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...ACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR TCA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTGGCTCACCAGCTTCATaGGCATGCGCGGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: PRPLHLALQLRAGLYSYFGSPAS*ACAGSA
Trigger: TGCGCTTCCCGCGCATGCTCATGAAGCTGGTGAGCC...AAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGGCTTATCCCAAGGGATaGGAGCCGATAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREAYPKG*EPIGLQ
Trigger: CTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGC...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCTTCAAGGGTGAGTTCTaGTTCACCTTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGFKGEF*FTLSRE
Trigger: CTCCCTGGACAAGGTGAATCAGAACTCACCCTTGAA...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTCGTCATATGACGGTTTaGGAGGGTAGAGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLRHMTV*EGRAER
Trigger: TCTCTCAGCTCTACCCTCTCAAACCGTCATATGACG...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGAGGTGGCCATCACCATaGCGCCATAGTGACGTCATA +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQRWPSP*RHSDVI
Trigger: TATGACGTCACTATGGCGTCATGGTGATGGCCACCT...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTCACCACGGACCACACTaGGCCGGAAGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PRPLHLALQLRAGLYSYFHHGPH*AGRSPC
Trigger: GCAAGGGCTTCTTCCGGCGCAGTGTGGTCCGTGGTG...AAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGTGTGACTGTGACTCCTaGTGCTGTTTCCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGCDCDS*CCFRIF
Trigger: GAAGATTCGGAAACAGCAGCAGGAGTCACAGTCACA...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTAGAAGGAGCGTTTGTTaGACTGCAGTTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSRRSVC*TAVGPP
Trigger: TGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCT...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGAAACCAGGCACTTaGTTAGCGAAGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQARKPGT*LAKSTI
Trigger: GATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCT...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCTCCTCCCGGCCCAGCTaGAGGAAACCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFSSRPS*RKPGTC
Trigger: GCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGA...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp TGCACGTTGGGCCGGTCGGCCGAGAAGATGTTGATGGCGATGAGCAGGGCGTACAGGACAGTCTTTAGTTaGCAATTCCCGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: CTLGRSAEKMLMAMSRAYRTVFS*QFPPSS
Trigger: GGAGGATGGCGGGAATTGGCAACTAAAGACTGTCCT...GTACGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGACCGGCCCAACGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGGTCGTCTTGTTGCCTTaGAGACTACTCGAAATGGCG +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRVVLLP*RLLEMA
Trigger: CGCCATTTCGAGTAGTCTGCAAGGCAACAAGACGAC...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCAGTTGTCGTCTTGTTaGCTTGCAGACTACTCGAAA +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPQLSSC*LADYSK
Trigger: TTTCGAGTAGTCTGCAAGGCAACAAGACGACAACTG...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGCTACTCCTGTTGCCCTaGGTTCCCTTGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQLLLLP*VPLLCF
Trigger: AAAGCAGAGCAAGGGAACCCAGGGCAACAGGAGTAG...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CCA 90 bp AGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCTTCCTCTTCGGGATCTaGGATGACCCAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SVTEVPRSPRPLHLALQLFLFGI*DDPVCA
Trigger: AGCACAGACTGGGTCATCCCAGATCCCGAAGAGGAA...GAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGTTCCTCTTCGGGATCTaGGATGACCCAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRFLFGI*DDPVCA
Trigger: AGCACAGACTGGGTCATCCCAGATCCCGAAGAGGAA...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSLSLAL*FLFGIW
Trigger: CCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAG...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGAAGTCCACGATCTCCTaGACTGAGATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSKSTIS*TEMMAS
Trigger: GCTGGCCATCATCTCAGTCCAGGAGATCGTGGACTT...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CCA 90 bp GTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTTCCTCGCTTCTTaGGAGCCAAACCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VGEGAFVALQLGRHQLLDHFLAS*EPNLQP
Trigger: GGGCTGGAGGTTTGGCTCCCAAGAAGCGAGGAAATG...ATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR CAA 72 bp CCCAGTGCCTGGCCCACAGGAGGCCTCAGCAAACACTaGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PSAWPTGGLSKH*LFGQKSRSPHS
Trigger: TGAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGTGGGCCAGGCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGWIISS*AAVSWT
Trigger: TGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCA...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGWIISS*AAVSWT
Trigger: TGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCA...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGTTCAAGGGTGAGTTCTaGTTCACCTTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREFKGEF*FTLSRE
Trigger: CTCCCTGGACAAGGTGAATCAGAACTCACCCTTGAA...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCATTTCTTTTCCCTGTaGTGGCAGTTTGTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLHFFSL*WQFVGE
Trigger: TTCGCCAACAAACTGCCATCACAGGGAAAAGAAATG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR GCA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGGACTGTGACTCCTGCTaGTGTTTCCGAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKDCDSC*CFRIFF
Trigger: GAAGAAGATTCGGAAACAGCAGCAGGAGTCACAGTC...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGGACTGTGACTCCTGCTaGTGTTTCCGAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGDCDSC*CFRIFF
Trigger: GAAGAAGATTCGGAAACAGCAGCAGGAGTCACAGTC...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp CCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGGACTGTGACTCCTGCTaGTGTTTCCGAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PLPLFKVHCVLGLRCKLGDCDSC*CFRIFF
Trigger: GAAGAAGATTCGGAAACAGCAGCAGGAGTCACAGTC...CCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCATGTGACTGTGACTCCTaGTGCTGTTTCCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQACDCDS*CCFRIF
Trigger: GAAGATTCGGAAACAGCAGCAGGAGTCACAGTCACA...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTTGTGACTGTGACTCCTaGTGCTGTTTCCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLCDCDS*CCFRIF
Trigger: GAAGATTCGGAAACAGCAGCAGGAGTCACAGTCACA...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTGTGACTGTGACTCCTaGTGCTGTTTCCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRCDCDS*CCFRIF
Trigger: GAAGATTCGGAAACAGCAGCAGGAGTCACAGTCACA...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTGATCTCGATAGTGGATaGCTTCAGGAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSDLDSG*LQEGDL
Trigger: CAGATCGCCCTCCTGAAGGCATCCACTATCGAGATC...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCCGCAAGGCGAAGACCTaGTCCGAGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFRKAKT*SECTEL
Trigger: GAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCG...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCGGCAGGCATAGCGCCTaGCCCCACCACGGACCACAC +
Preference number: 4 (lower is better)
Translates to: NIYWVNVSISRMANPVPGGRHSA*PHHGPH
Trigger: GTGTGGTCCGTGGTGGGGCCAGGCGCTATGCCTGCC...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCCCTGCAGGGCCCTTCTaGATCCTCGGTGACGTCTTC +
Preference number: 4 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFPAGPF*ILGDVF
Trigger: GAAGACGTCACCGAGGATCCAGAAGGGCCCTGCAGG...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATCTCCTTTACAGTGGGTaGAGAAGAAGGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHLLYSG*RRRGAR
Trigger: CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAG...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREWIISS*AAVSWT
Trigger: TGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCA...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR TCA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCCTGAGGCCTCTGTCCTaGACTTTCACAGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFLRPLS*TFTAGD
Trigger: GTCGCCTGCTGTGAAAGTTCAGGACAGAGGCCTCAG...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTTTATCCTTCAAGGGTaGGTTCTGATTCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLFILQG*VLIHLV
Trigger: GACAAGGTGAATCAGAACTCACCCTTGAAGGATAAA...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCATAGTGACGTCATATaGCGGTTTGAGAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSHSDVI*RFERVE
Trigger: CTCTACCCTCTCAAACCGTCATATGACGTCACTATG...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR GCA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGACTGTGACTCCTGCTaGTGTTTCCGAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQDCDSC*CFRIFF
Trigger: GAAGAAGATTCGGAAACAGCAGCAGGAGTCACAGTC...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp TCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGCAGTGTGACTGTGACTCCTaGTGCTGTTTCCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: SVVGTCNPFTPSGRLAGQCDCDS*CCFRIF
Trigger: GAAGATTCGGAAACAGCAGCAGGAGTCACAGTCACA...CTGCCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTAGGAAACCAGGCACTTaGTTAGCGAAGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSRKPGT*LAKSTI
Trigger: GATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCT...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR GCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATACACCCAGTCCCACCTaGTCAATCAGGTTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHTPSPT*SIRFGH
Trigger: GTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGT...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTGTGAACTACTCCTGTTaGCCTGTAGTCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSVNYSC*PVVPAT
Trigger: AGTAGCTGGGACTACAGGGCAACAGGAGTAGTTCAC...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTACTCCAGCTCCGGGCTaGATTGTATTCATATTTTAT +
Preference number: 4 (lower is better)
Translates to: REGSREGSVVGTCNPFTPTPAPG*IVFIFY
Trigger: ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGT...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CTGCAGGCCTGCACGGTGGAAGTCGTCCTTGCTGTAGGTGAAGTCCTTCAAGAAAGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LQACTVEVVLAVGEVLQESVTLG*SEKERL
Trigger: CAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCT...TTCTTGAAGGACTTCACCTACAGCAAGGACGACTTCCACCGTGCAGGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
3UTR CAA 72 bp TCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTaGCACTCCAGCTCCGGGCTGGATTGTATTCATATT +
Preference number: 4 (lower is better)
Translates to: SLRSLEARALSI*HSSSGLDCIHI
Trigger: AATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTAGTCCTTCAAGAAGGTaGTACACTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSSPSRR*YTLSRG
Trigger: ACCACGAGACAGAGTGTATCACCTTCTTGAAGGACT...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR GCA 90 bp GCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATTTCTGCCTCCTTGCACTTaGGCAGCCGGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALSILHSSSGLDCIHILFLPPCT*AAGTAG
Trigger: GCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAG...AAATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTGACTGTGACTCCTGCTaGTGTTTCCGAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSDCDSC*CFRIFF
Trigger: GAAGAAGATTCGGAAACAGCAGCAGGAGTCACAGTC...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CCA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCGCCAGCTCCGTGAAGTaGGCAAAGCGTTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NIYWVNVSISRMANPVPGASSVK*AKRCWR
Trigger: CCGCCAGCAACGCTTTGCCCACTTCACGGAGCTGGC...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCCCGGCGTCTATCTGCTaGAGGGTGGTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NIYWVNVSISRMANPVPGPASIC*RVVRQG
Trigger: GCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGG...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATTTACTGCGTGCTGGGCTTaGGGTGTAAGCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALSILHSSSGLDCIHILFTACWA*GVSWGG
Trigger: CCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGT...AAATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCGAAACATTTATTGGGTaGATGTCTCCATCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: RFGHPVSLRSLEARALSIETFIG*MSPSLE
Trigger: TTCTAGAGATGGAGACATTCACCCAATAAATGTTTC...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp CCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTGTGAACTACTCCTGTTaGCCTGGGTTCCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PRPLHLALQLRAGLYSYFVNYSC*PGFPCS
Trigger: AGAGCAAGGGAACCCAGGGCAACAGGAGTAGTTCAC...AAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253727.10
CDS-3UTR CCA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTGTTTTTCCGCAAGGGTaGGGAAATAGTCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSVFPQG*GNSLQH
Trigger: ATGTTGGAGACTATTTCCCCACCCTTGCGGAAAAAC...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR GCA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCAGGAAACCAGGCACTTaGTTAGCGAAGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFRKPGT*LAKSTI
Trigger: GATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCT...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTCTGGAAACATTTATTaGGTGAATGTCTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVSGNIY*VNVSIS
Trigger: AGAGATGGAGACATTCACCCAATAAATGTTTCCAGA...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp CTGCAGGCCTGCACGGTGGAAGTCGTCCTTGCTGTAGGTGAAGTCCTTCAAGAACTGGCAGTAGCTGCATaGCACAGAGAGAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LQACTVEVVLAVGEVLQELAVAA*HREKVF
Trigger: AAAAACCTTCTCTCTGTGCCATGCAGCTACTGCCAG...TTCTTGAAGGACTTCACCTACAGCAAGGACGACTTCCACCGTGCAGGCCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CCA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCTCATGCAGGTTTGCTTaGGACTGCGTAAGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFSCRFA*DCVSLG
Trigger: GCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGA...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR TCA 90 bp CTCATTCACTTAAATCCTGTTTATCCTTCAAGGGTGAGTTCTGATTCACCTTGTCCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: LIHLNPVYPSRVSSDSPCPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...ACAAGGTGAATCAGAACTCACCCTTGAAGGATAAACAGGATTTAAGTGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR GCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATACGATCATGCAGGTTTaGTTGGGACTGCGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHTIMQV*LGLRKS
Trigger: AGACTTACGCAGTCCCAAGCAAACCTGCATGATCGT...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CCA 90 bp GCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATAAGTCCACGATCTCCTaGACTGAGATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: APSPSCTPAPGWIVFIFYKSTIS*TEMMAS
Trigger: GCTGGCCATCATCTCAGTCCAGGAGATCGTGGACTT...ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGTCTGGAAACATTTATTaGGTGAATGTCTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKSGNIY*VNVSIS
Trigger: AGAGATGGAGACATTCACCCAATAAATGTTTCCAGA...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CCA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATACTCCAGCTCCGGGCTaGATTGTATTCATATTTTAT +
Preference number: 4 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHTPAPG*IVFIFY
Trigger: ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGT...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATTTTATCCTTCAAGGGTaGGTTCTGATTCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: APSPSCTPAPGWIVFIFYFILQG*VLIHLV
Trigger: GACAAGGTGAATCAGAACTCACCCTTGAAGGATAAA...ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR TCA 90 bp GCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATGAAACATTTATTGGGTaGATGTCTCCATCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: APSPSCTPAPGWIVFIFYETFIG*MSPSLE
Trigger: TTCTAGAGATGGAGACATTCACCCAATAAATGTTTC...ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS CCA 90 bp GGGGAGGGCAGTGTGGCTGGCAGAACCCAGCCTGAACGGACCACGTaGGCCGCGGGACGTAGTTGGCTCTGCGCAGAGGCTCTGCGGGGC +
Preference number: 5 (lower is better)
Translates to: GEGSVAGRTQPERTT*AAGRSWLCAEALRG
Trigger: GCCCCGCAGAGCCTCTGCGCAGAGCCAACTACGTCCCGCGGCCCACGTGGTCCGTTCAGGCTGGGTTCTGCCAGCCACACTGCCCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 90 bp GGCAGAACCCAGCCTGAACGGACCACGTGGGCCGCGGGACGTAGTTaGCTCTGCGCAGAGGCTCTGCGGGGCCCTACCTGCGGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GRTQPERTTWAAGRS*LCAEALRGPTCGLL
Trigger: CAAGAGGCCGCAGGTAGGGCCCCGCAGAGCCTCTGCGCAGAGCCAACTACGTCCCGCGGCCCACGTGGTCCGTTCAGGCTGGGTTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS-3UTR CAA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCCCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGPGSCT*GRSAEK
Trigger: CTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGG...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGCCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLPGSCT*GRSAEK
Trigger: CTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGG...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGCCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKPGSCT*GRSAEK
Trigger: CTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGG...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGCCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGPGSCT*GRSAEK
Trigger: CTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGG...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS TCA 90 bp GTTGGCTCTGCGCAGAGGCTCTGCGGGGCCCTACCTGCGGCCTCTTaGTGCGCGTGTAGGACAGCAGCGCCTCCACGTAGGGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: VGSAQRLCGALPAAS*CACRTAAPPRRAAA
Trigger: TGCAGCAGCCCTACGTGGAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCGCAGGTAGGGCCCCGCAGAGCCTCTGCGCAGAGCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS TCA 90 bp GCTCATGGCTGCGCGCGGGGGTCTCGTGGACGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTGGAAACAGCCGCGGGAGGCGCGAAT +
Preference number: 5 (lower is better)
Translates to: AHGCARGSRGRPLAE*TTPVALETAAGGAN
Trigger: ATTCGCGCCTCCCGCGGCTGTTTCCAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCGCAGCCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597790.5
CDS-3UTR CAA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCATCCCTGCCTCCTaGCACTTGCGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPLIPAS*HLRSRH
Trigger: GTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAG...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCCTCATCCCTGCCTCCTaGCACTTGCGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPLIPAS*HLRSRH
Trigger: GTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAG...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGPGSCT*GRSAEK
Trigger: CTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGG...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS TCA 90 bp CCCCGCCCTTGCGTCACGTCCGGAAGAGGGGCGGAGCGTGAAACTTaGCGAACTTCCGGTCCGCTTAGGACCAGCCGAAGCTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PRPCVTSGRGAERET*RTSGPLRTSRSCCP
Trigger: GGGGCAGCAGCTTCGGCTGGTCCTAAGCGGACCGGAAGTTCGTCAAGTTTCACGCTCCGCCCCTCTTCCGGACGTGACGCAAGGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS GCA 90 bp GCGGGGGTCTCGTGGACGGCCTCTCGCGGAGTGAACTACTCCTGTTaGCCTGGAAACAGCCGCGGGAGGCGCGAATTACCGAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: AGVSWTASRGVNYSC*PGNSRGRRELPRGG
Trigger: TCCTCCCCTCGGTAATTCGCGCCTCCCGCGGCTGTTTCCAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCGTCCACGAGACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597790.5
CDS-3UTR CAA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCCTGCCTCCTTGCACTaGCGCAGCCGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRPASLH*RSRHCW
Trigger: CCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCCTGCCTCCTTGCACTaGCGCAGCCGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLPASLH*RSRHCW
Trigger: CCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTCTCATCCCTGCCTCCTaGCACTTGCGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: REGSREGSVVGTCNPFTPLIPAS*HLRSRH
Trigger: GTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAG...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: EEGVPASICWRVVRQGCGGQGVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRPGSCT*GRSAEK
Trigger: CTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGG...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTAGAGGCGGCAGCTTCTaGTCCTGGAGCCGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: REGSREGSVVGTCNPFTPRGGSF*SWSRKA
Trigger: CGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGCCTGCCTCCTTGCACTaGCGCAGCCGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRPASLH*RSRHCW
Trigger: CCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGG...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACAGCAGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: VGLGGQPLTRGRPRSPTAEKERL*HCSWAA
Trigger: GGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTC...TGCTGTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp GGAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GGRAAGKGQWSGPATLSPEKERL*HCSWAA
Trigger: GGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTC...GGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKGQGVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGAGAGGCGGCAGCTTCTaGTCCTGGAGCCGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLRGGSF*SWSRKA
Trigger: CGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGAGAGGCGGCAGCTTCTaGTCCTGGAGCCGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLRGGSF*SWSRKA
Trigger: CGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GTCCTGGAGCCGCAAGGCGAAGACCTGCTCCGAGTGCACAGAGCTCAGCGTGCGTCCAGCCTGTCCCCCTaGCGCGGGAAAGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: VLEPQGEDLLRVHRAQRASSLSP*RGKVLH
Trigger: ATGGAGGACTTTCCCGCGCAAGGGGGACAGGCTGGA...CGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGCGGCTCCAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp CCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGCGGCCCAGCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PIGLQARPRAPSTLGRGRRPSVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGCTGGGCCG...CCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000599105.5
CDS CCA 90 bp TGCTCCCTCATCCCTGCCTCCTTGCACTTGCGCAGCCGGCACTGCTaGCACTTGCGCCGCATGAAAGCGTCCATCTGGCAGGTTCCGCCA +
Preference number: 5 (lower is better)
Translates to: CSLIPASLHLRSRHC*HLRRMKASIWQVPP
Trigger: TGGCGGAACCTGCCAGATGGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS CCA 90 bp TCTGTTCTTCAGAAAGGACGCCCCAGTCTGTGCTGCAGGCTGAGCTaGCCTCATCAGTGCCTGGGACATCAGGGTCCGGACCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SVLQKGRPSLCCRLS*PHQCLGHQGPDPRA
Trigger: GGCCCGGGGGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCTCAGCCTGCAGCACAGACTGGGGCGTCCTTTCTGAAGAACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411902.6
CDS-3UTR CAA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGCGGCACTGCTGGCACTaGCGCCGCATGAAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKRHCWH*RRMKAS
Trigger: GGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCG...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGCGGCACTGCTGGCACTaGCGCCGCATGAAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVRHCWH*RRMKAS
Trigger: GGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCG...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCCTGCCTCCTTGCACTaGCGCAGCCGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKPASLH*RSRHCW
Trigger: CCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGG...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp TGTGGGGCTGGGTGGCCAGCCCCTCACTCGTGGACGTCCCAGATCTCCGACAGCTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: CGAGWPAPHSWTSQISDSFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...GCTGTCGGAGATCTGGGACGTCCACGAGTGAGGGGCTGGCCACCCAGCCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp GGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGCTGGGGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GSVVGTCNPFTPSGRLAGGQGVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...CCCAGCGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: EEGVPASICWRVVRQGCGSAEKM*MAMSRA
Trigger: CGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGA...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGAGAGGCGGCAGCTTCTaGTCCTGGAGCCGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVRGGSF*SWSRKA
Trigger: CGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGAGGCGGCAGCTTCTaGTCCTGGAGCCGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQARGGSF*SWSRKA
Trigger: CGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTCCGGCAACCCCGCCCTaGCGTCACGTCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSPATPP*RHVRKR
Trigger: CCTCTTCCGGACGTGACGCAAGGGCGGGGTTGCCGG...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTCGGCCCAGCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLRPSVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGCTGGGCCG...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000599105.5
CDS CCA 90 bp GTGGCCCAGCATCTTCGGGGCTGGGCCCTTCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGGGATGACCCAGTCTGTGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: VAQHLRGWALLSLAL*FLFGIWDDPVCAAG
Trigger: GCCTGCAGCACAGACTGGGTCATCCCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000597790.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS CCA 90 bp GGCCCAGCTGGCTCTACCCCATTGGGACCGTCACACTCAAGGTTGTaGAGGGGGCAGTACCGTGACTTTGGGCTGGTCGGAGAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: GPAGSTPLGPSHSRL*RGQYRDFGLVGEGA
Trigger: CGCTCCTTCTCCGACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCCAGCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 90 bp GGTCTCGTGGACGGCCTCTCGCGGAGTGAACTACTCCTGTTGCCCTaGAAACAGCCGCGGGAGGCGCGAATTACCGAGGGGAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: GLVDGLSRSELLLLP*KQPREARITEGRKW
Trigger: CCATTTCCTCCCCTCGGTAATTCGCGCCTCCCGCGGCTGTTTCCAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCGTCCACGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597790.5
CDS CCA 90 bp TCCGGTTTCCAGGCCCTGGATGTCCCTCCGCCTGCAGGGCCCTTCTaGATCCTCGGTGACGTCTTCTTGGGGACGTATGTGGCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: SGFQALDVPPPAGPF*ILGDVFLGTYVAVF
Trigger: GAAGACGGCCACATACGTCCCCAAGAAGACGTCACCGAGGATCCAGAAGGGCCCTGCAGGCGGAGGGACATCCAGGGCCTGGAAACCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 90 bp TGCGGATGGTGGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCTTaGGACTGCGTAAGTCTAGGCGGCAGGGCCTCTGCACACAGGACG +
Preference number: 5 (lower is better)
Translates to: CGWWPGGGRRSCRFA*DCVSLGGRASAHRT
Trigger: CGTCCTGTGTGCAGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTGCCCTGGGTTCCCTaGCTCTGCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: EGGQPGRVSGRDLQPFHPLPWVP*LCFSSS
Trigger: GGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCAA...GGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CAA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGGGGCCCTTCTTTCGCTaGCGCTCTGGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGGPFFR*RSGSSS
Trigger: CGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCC...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCGGCACTGCTGGCACTaGCGCCGCATGAAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRRHCWH*RRMKAS
Trigger: GGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACGGCACTGCTGGCACTaGCGCCGCATGAAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRRHCWH*RRMKAS
Trigger: GGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCG...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTCCTGCCTCCTTGCACTaGCGCAGCCGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSPASLH*RSRHCW
Trigger: CCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGG...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGCTCATCCCTGCCTCCTaGCACTTGCGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PLFKVHCVLGLRCKLGRELIPAS*HLRSRH
Trigger: GTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAG...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCTCATCCCTGCCTCCTaGCACTTGCGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRLIPAS*HLRSRH
Trigger: GTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGGAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: GRAMGPPLPLFKVHCVLGFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...GCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: EEGVPASICWRVVRQGCGFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGEKERL*HCSWAA
Trigger: GGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTC...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: GQPGRVSGRDLQPFHPFWSEKER*LHCSWA
Trigger: GGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGA...CCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: EEGVPASICWRVVRQGCGSEKER*LHCSWA
Trigger: GGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGA...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGGTTCGGGCACCCAGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: RFGHPVSLRSLEARALSISAEKM*MAMSRA
Trigger: CGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGA...GATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACTGGGTGCCCGAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLSAEKM*MAMSRA
Trigger: CGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGA...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGCTCGGTGACGTCTTCTaGGGGACGTATGTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: VPRSPRPLHLALQLRAGLLGDVF*GTYVAV
Trigger: GACGGCCACATACGTCCCCAAGAAGACGTCACCGAG...CAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGGGCAAATGGCCGTCCTaGTGGCCGCGACACCCAGTT +
Preference number: 5 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRGKWPS*WPRHPV
Trigger: AACTGGGTGTCGCGGCCACAAGGACGGCCATTTGCC...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS GCA 90 bp GGCCCAGAGGCTGAGCTGCTGCTGCCCTGCGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCCTGCTGCTGTTTCCGAATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GPEAELLLPCGPTGD*DCDCDSCCCFRIFF
Trigger: GAAGAAGATTCGGAAACAGCAGCAGGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS GCA 90 bp TGGTGGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCTTGGGACTaGGTAAGTCTAGGCGGCAGGGCCTCTGCACACAGGACGCTGAGT +
Preference number: 5 (lower is better)
Translates to: WWPGGGRRSCRFAWD*VSLGGRASAHRTLS
Trigger: ACTCAGCGTCCTGTGTGCAGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS GCA 90 bp ACTCTGCGGATGGTGGCCGGGTGGAGGGAGACGATCATGCAGGTTTaGTTGGGACTGCGTAAGTCTAGGCGGCAGGGCCTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: TLRMVAGWRETIMQV*LGLRKSRRQGLCTQ
Trigger: CTGTGTGCAGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS GCA 90 bp ACACTGCGACTCTGCGGATGGTGGCCGGGTGGAGGGAGACGATCATaGAGGTTTGCTTGGGACTGCGTAAGTCTAGGCGGCAGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: TLRLCGWWPGGGRRS*RFAWDCVSLGGRAS
Trigger: AGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGGGGCCCTTCTTTCGCTaGCGCTCTGGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRGPFFR*RSGSSS
Trigger: CGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCC...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCGGGCCCTTCTTTCGCTaGCGCTCTGGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGGPFFR*RSGSSS
Trigger: CGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCC...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGGGGCCCTTCTTTCGCTaGCGCTCTGGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: GTPSPTCSIRFGHPVSLRGPFFR*RSGSSS
Trigger: CGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCC...CCTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGEKERL*HCSWAA
Trigger: GGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTC...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLSEKER*LHCSWA
Trigger: GGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGA...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GCCTGGGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: AWGHPVPPAQSGSGTQCHSEKER*LHCSWA
Trigger: GGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGA...GTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGAGCCATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ESHGSSPPSVQGALRAGLSAEKM*MAMSRA
Trigger: CGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGA...AAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CATGGGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: HGSSPPSVQGALRAGLEVSAEKM*MAMSRA
Trigger: CGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGA...CACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATTCCCCGGCTCCTGCACGTaGGGCCGGTCGGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: RRPQQTLVVRTEVQVPSFPGSCT*GRSAEK
Trigger: CTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGGG...GAATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp GTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATAGAGGCGGCAGCTTCTaGTCCTGGAGCCGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: VGEGAFVALQLGRHQLLDRGGSF*SWSRKA
Trigger: CGCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCT...ATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp GGGACACCCAGTCCCACCTGCTCAATCAGGTTCGGGCACCCAGTGTCACTGAGGGGCCGCGACACCCAGTaGTCGTCTTGTTGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: GTPSPTCSIRFGHPVSLRGRDTQ*SSCCLA
Trigger: TGCAAGGCAACAAGACGACAACTGGGTGTCGCGGCC...CCTCAGTGACACTGGGTGCCCGAACCTGATTGAGCAGGTGGGACTGGGTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 90 bp CATTCTCCCACACCCTGGGTGATGGCCCAGCTGGCTCTACCCCATTaGGACCGTCACACTCAAGGTTGTGGAGGGGGCAGTACCGTGACT +
Preference number: 5 (lower is better)
Translates to: HSPTPWVMAQLALPH*DRHTQGCGGGSTVT
Trigger: AGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCCAGCTGGGCCATCACCCAGGGTGTGGGAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS-3UTR CAA 90 bp GCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGAGTGAACTACTCCTGTaGCCCTGGGTTCCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: ADRSTGSAQGPFHPRKRKSELLL*PWVPLL
Trigger: GAGCAAGGGAACCCAGGGCAACAGGAGTAGTTCACT...CTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CAA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGGGGCCCTTCTTTCGCTaGCGCTCTGGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKGPFFR*RSGSSS
Trigger: CGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCC...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQEKERL*HCSWAA
Trigger: GGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTC...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCAGGAAACCAGGCACTaGCTTAGCGAAGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: EEGVPASICWRVVRQGCGQETRH*LSEVHD
Trigger: ATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGAGTGAACTACTCCTGTaGCCCTGTAGTCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: EEGVPASICWRVVRQGCGSELLL*PCSPSY
Trigger: GTAGCTGGGACTACAGGGCAACAGGAGTAGTTCACT...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp TGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCACGATCTCCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: WGLSQGMRADRSTGSAQGTISVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGGAGATCGT...GCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598168.5
CDS CCA 90 bp CCGGTCCGCTTAGGACCAGCCGAAGCTGCTGCCCCGCACGGAAGTTaGAAACTCACCGGAAGTTTACCGGGTAGATCTACTGGGACTTGG +
Preference number: 5 (lower is better)
Translates to: PVRLGPAEAAAPHGS*KLTGSLPGRSTGTW
Trigger: CCAAGTCCCAGTAGATCTACCCGGTAAACTTCCGGTGAGTTTCCAACTTCCGTGCGGGGCAGCAGCTTCGGCTGGTCCTAAGCGGACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp ATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGTTGCCCTGGGTTCCCTaGCTCTGCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: MRADRSTGSAQGPFHPRKLPWVP*LCFSSS
Trigger: GGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCAA...CTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATCGGCTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CAA 90 bp GGGAGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTTGCCCTGGGTTCCCTaGCTCTGCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: GSLLDLDWGLSQGMRADRLPWVP*LCFSSS
Trigger: GGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCAA...CCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CAA 90 bp TGCACGTTGGGCCGGTCGGCCGAGAAGATGTTGATGGCGATGAGCAGGGCGTACAGTGAACTACTCCTGTaGCCCTGGGTTCCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: CTLGRSAEKMLMAMSRAYSELLL*PWVPLL
Trigger: GAGCAAGGGAACCCAGGGCAACAGGAGTAGTTCACT...GTACGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGACCGGCCCAACGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp GACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTACAGGCTCGGCCCAGTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: DWGLSQGMRADRSTGSAQFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...CTGGGCCGAGCCTGTAGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGTTTGTTGCACTGCAGTaGGGCCGCCACCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: PLFKVHCVLGLRCKLGREFVALQ*GRHQLL
Trigger: CAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGAGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: PLFKVHCVLGLRCKLGRESEKER*LHCSWA
Trigger: GGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGA...CTCCCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGCAGGAAACCAGGCACTaGCTTAGCGAAGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: GRGRGAGVYLLEGGQARLQETRH*LSEVHD
Trigger: ATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTG...CAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSSAEKM*MAMSRA
Trigger: CGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGA...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCAAGGCTGTGGGCCAGTTGTCGTCTTGTaGCCTTGCAGACTACTCGAA +
Preference number: 5 (lower is better)
Translates to: EEGVPASICWRVVRQGCGPVVVL*PCRLLE
Trigger: TTCGAGTAGTCTGCAAGGCAACAAGACGACAACTGG...CCCACAGCCTTGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS GCA 90 bp GTCCCCCTTGCGCGGGAAAGTCCTCCATCTCTAGTTCCCGCCCCATaGAGTCTCATCTGGACCGTTTCTACTTTCTGCGGCCCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: VPLARESPPSLVPAP*SLIWTVSTFCGPVS
Trigger: AGAGACAGGGCCGCAGAAAGTAGAAACGGTCCAGATGAGACTGCATGGGGCGGGAACTAGAGATGGAGGACTTTCCCGCGCAAGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600355.5
CDS GCA 90 bp TGGAGGGTGGTGGAGGAATTGAGGACACTTTCCACGTGTCTACACTaGGACTCTGCGGATGGTGGCCGGGTGGAGGGAGACGATCATGCA +
Preference number: 5 (lower is better)
Translates to: WRVVEELRTLSTCLH*DSADGGRVEGDDHA
Trigger: TGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGACACGTGGAAAGTGTCCTCAATTCCTCCACCACCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp GGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACTCGTTGCCCTGGGTTCCCTaGCTCTGCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: GKGQWSGPATLSPLLEDSLPWVP*LCFSSS
Trigger: GGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCAA...CGAGTCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CAA 90 bp GGTCCTCCCCTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGAGTGAACTACTCCTGTaGCCCTGGGTTCCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GPPLPLFKVHCVLGLRCKSELLL*PWVPLL
Trigger: GAGCAAGGGAACCCAGGGCAACAGGAGTAGTTCACT...CTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAGGGGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000598168.5
ENST00000599105.5
CDS-3UTR CAA 90 bp AGCCTCCTGGACCTGGACTGGGGCTTATCCCAAGGGATGAGAGCCGATAGGTCTTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: SLLDLDWGLSQGMRADRSSEKER*LHCSWA
Trigger: GGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGA...AGACCTATCGGCTCTCATCCCTTGGGATAAGCCCCAGTCCAGGTCCAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS-3UTR CAA 90 bp GGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATGCCCCGCACGGAAGTaGGAAACTCACCGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: GRRRSVCCTAVGPPPTAGCPARK*ETHRKF
Trigger: AAACTTCCGGTGAGTTTCCAACTTCCGTGCGGGGCA...TCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp AGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGTGTCGTCTTGTTGCCTaGCAGACTACTCGAAATGGC +
Preference number: 5 (lower is better)
Translates to: RAAGKGQWSGPATLSPLLCRLVA*QTTRNG
Trigger: GCCATTTCGAGTAGTCTGCAAGGCAACAAGACGACA...CAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp GATAGGTCTACAGGCTCGGCCCAGGGCCCCTTCCACCCTAGGAAGAGGAAGGGGATCATGCAGGTTTGCTaGGGACTGCGTAAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: DRSTGSAQGPFHPRKRKGIMQVC*GLRKSR
Trigger: CCTAGACTTACGCAGTCCCAAGCAAACCTGCATGAT...CCCCTTCCTCTTCCTAGGGTGGAAGGGGCCCTGGGCCGAGCCTGTAGACCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp AGGGAGGGCAGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTAAGGCTGATGGCAGTTaGACAGTGAACATCAAAGGG +
Preference number: 5 (lower is better)
Translates to: REGSREGSVVGTCNPFTPKADGS*TVNIKG
Trigger: CCCTTTGATGTTCACTGTCAAACTGCCATCAGCCTT...AGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCTGCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS TCA 90 bp CCCATTGGGACCGTCACACTCAAGGTTGTGGAGGGGGCAGTACCGTaGCTTTGGGCTGGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTT +
Preference number: 5 (lower is better)
Translates to: PIGTVTLKVVEGAVP*LWAGRRRSVCCTAV
Trigger: AACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS GCA 90 bp GTCTTTGTTCTTCCCGTGTCCTCTTTCAGTCCAGCCTGTCCCCCTTaGGCGGGAAAGTCCTCCATCTCTAGTTCCCGCCCCATGCAGTCT +
Preference number: 5 (lower is better)
Translates to: VFVLPVSSFSPACPP*AGKSSISSSRPMQS
Trigger: AGACTGCATGGGGCGGGAACTAGAGATGGAGGACTTTCCCGCGCAAGGGGGACAGGCTGGACTGAAAGAGGACACGGGAAGAACAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000600355.5
CDS GCA 90 bp GGTGGAGGAATTGAGGACACTTTCCACGTGTCTACACTGCGACTCTaGGGATGGTGGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: GGGIEDTFHVSTLRL*GWWPGGGRRSCRFA
Trigger: AGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGACACGTGGAAAGTGTCCTCAATTCCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 90 bp CACTTTCCACGTGTCTACACTGCGACTCTGCGGATGGTGGCCGGGTaGAGGGAGACGATCATGCAGGTTTGCTTGGGACTGCGTAAGTCT +
Preference number: 5 (lower is better)
Translates to: HFPRVYTATLRMVAG*RETIMQVCLGLRKS
Trigger: AGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGACACGTGGAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 90 bp ATTGAGGACACTTTCCACGTGTCTACACTGCGACTCTGCGGATGGTaGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCTTGGGACTGC +
Preference number: 5 (lower is better)
Translates to: IEDTFHVSTLRLCGW*PGGGRRSCRFAWDC
Trigger: GCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGACACGTGGAAAGTGTCCTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGCAGGAAACCAGGCACTaGCTTAGCGAAGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRQETRH*LSEVHD
Trigger: ATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTG...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR CAA 90 bp AGCCGGGAAGGGTCAGTGGTCGGGACCTGCAACCCTTTCACCCCTTCTGGAAGACAGGAAACCAGGCACTaGCTTAGCGAAGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: SREGSVVGTCNPFTPSGRQETRH*LSEVHD
Trigger: ATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTG...TCTTCCAGAAGGGGTGAAAGGGTTGCAGGTCCCGACCACTGACCCTTCCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000598168.5
ENST00000652203.1
CDS-3UTR CAA 90 bp CTCCCTCTGTTCAAGGTGCACTGCGTGCTGGGCTTGAGGTGTAAGCTGGGGAGGGGCCTCAGCAAACACTaGTTGTTCGGACAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LPLFKVHCVLGLRCKLGRGLSKH*LFGQKS
Trigger: GGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCC...CCTCCCCAGCTTACACCTCAAGCCCAGCACGCAGTGCACCTTGAACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp AGTGTCACTGAGGTCCCTAGAAGCCCGCGCCCTCTCCATCTTGCACTCCAGCTCCACCCAGTTGTCGTCTaGTTGCCTTGCAGACTACTC +
Preference number: 5 (lower is better)
Translates to: SVTEVPRSPRPLHLALQLHPVVV*LPCRLL
Trigger: GAGTAGTCTGCAAGGCAACAAGACGACAACTGGGTG...GAGCTGGAGTGCAAGATGGAGAGGGCGCGGGCTTCTAGGGACCTCAGTGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS-3UTR CAA 90 bp GCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATCGGCACTGCTGGCACTaGCGCCGCATGAAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: APSPSCTPAPGWIVFIFYRHCWH*RRMKAS
Trigger: GGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCG...ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp ACAGGAGGCCTCAGCAAACACTTGTTGTTCGGACAGAAGTCCAGGTCCCCTCATGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TGGLSKHLLFGQKSRSPHEKERL*HCSWAA
Trigger: GGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTC...ATGAGGGGACCTGGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp CCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTTCGGCCGAGAAGATGTaGATGGCGATGAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PRPLHLALQLRAGLYSYFSAEKM*MAMSRA
Trigger: CGCCCTGCTCATCGCCATCAACATCTTCTCGGCCGA...AAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp ACCCTAGGAAGAGGAAGGGGTGCCGGCGTCTATCTGCTGGAGGGTGGTCAGGCATTCGAGTCTAAGTCTTaGTTCTTCCCGTGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: TLGRGRGAGVYLLEGGQAFESKS*FFPCPL
Trigger: AAGAGGACACGGGAAGAACAAAGACTTAGACTCGAA...TGCCTGACCACCCTCCAGCAGATAGACGCCGGCACCCCTTCCTCTTCCTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp AAGGAGCGTTTGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTAGTTTGCCCTGGGTTCCCTaGCTCTGCTTTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: KERLLHCSWAATNCWIISLPWVP*LCFSSS
Trigger: GGACGAAGAAAAGCAGAGCAAGGGAACCCAGGGCAA...ACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp GCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATGGGCCCTTCTTTCGCTaGCGCTCTGGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: APSPSCTPAPGWIVFIFYGPFFR*RSGSSS
Trigger: CGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCC...ATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp GCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATTTGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: ALSILHSSSGLDCIHILFGQGVT*GWSEKE
Trigger: CTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...AAATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS GCA 90 bp ATTGCTGAAGGACACACTGAAGAGGGTAGGAGGACAGTCTTTAGTTaGCAATTCCCGCCATCCTCCATCCCTGGCAGTAGCTGCATGGCA +
Preference number: 5 (lower is better)
Translates to: IAEGHTEEGRRTVFS*QFPPSSIPGSSCMA
Trigger: TGCCATGCAGCTACTGCCAGGGATGGAGGATGGCGGGAATTGGCAACTAAAGACTGTCCTCCTACCCTCTTCAGTGTGTCCTTCAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS CCA 90 bp TTAGTTGCCAATTCCCGCCATCCTCCATCCCTGGCAGTAGCTGCATaGCACAGAGAGAAGGTTTTTCCGCAAGGGTGGGGAAATAGTCTC +
Preference number: 5 (lower is better)
Translates to: LVANSRHPPSLAVAA*HREKVFPQGWGNSL
Trigger: GAGACTATTTCCCCACCCTTGCGGAAAAACCTTCTCTCTGTGCCATGCAGCTACTGCCAGGGATGGAGGATGGCGGGAATTGGCAACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp CCGCGCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTGGCCTCAGCAAACACTaGTTGTTCGGACAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PRPLHLALQLRAGLYSYFGLSKH*LFGQKS
Trigger: GGACTTCTGTCCGAACAACAAGTGTTTGCTGAGGCC...AAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS CCA 90 bp AGTTGGAAACTCACCGGAAGTTTACCGGGTAGATCTACTGGGACTTaGCAGAAGAGTTCCGAACCCATTTCCTCGCTTCTTGGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: SWKLTGSLPGRSTGT*QKSSEPISSLLGSQ
Trigger: TTGGCTCCCAAGAAGCGAGGAAATGGGTTCGGAACTCTTCTGCCAAGTCCCAGTAGATCTACCCGGTAAACTTCCGGTGAGTTTCCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS-3UTR CAA 90 bp AACATTTATTGGGTGAATGTCTCCATCTCTAGAATGGCCAACCCAGTGCCTGGCAGTGAACTACTCCTGTaGCCCTGGGTTCCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: NIYWVNVSISRMANPVPGSELLL*PWVPLL
Trigger: GAGCAAGGGAACCCAGGGCAACAGGAGTAGTTCACT...GCCAGGCACTGGGTTGGCCATTCTAGAGATGGAGACATTCACCCAATAAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253727.10
CDS-3UTR CAA 90 bp GCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATTTCAGGAAACCAGGCACTaGCTTAGCGAAGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: ALSILHSSSGLDCIHILFQETRH*LSEVHD
Trigger: ATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTG...AAATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253727.10
ENST00000652203.1
CDS-3UTR CAA 90 bp GCCCTCTCCATCTTGCACTCCAGCTCCGGGCTGGATTGTATTCATATTTTATTTCCCTGTGATGGCAGTTaGTTGGCGAACATCAAAGAA +
Preference number: 5 (lower is better)
Translates to: ALSILHSSSGLDCIHILFPCDGS*LANIKE
Trigger: TTCTTTGATGTTCGCCAACAAACTGCCATCACAGGG...AAATAAAATATGAATACAATCCAGCCCGGAGCTGGAGTGCAAGATGGAGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 72 bp TCTGGCAGGTTCCGCCACCCCGGCAGGCATAGCGCCTaGCCCCACCACGGACCACACTGCGCCGGAAGAAGC +
Preference number: 6 (lower is better)
Translates to: SGRFRHPGRHSA*PHHGPHCAGRS
Trigger: GCTTCTTCCGGCGCAGTGTGGTCCGTGGTGGGGCCAGGCGCTATGCCTGCCGGGGTGGCGGAACCTGCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS TCA 72 bp TGCGCGCGGGGGTCTCGTGGACGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTGGAAACAGCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: CARGSRGRPLAE*TTPVALETAAG
Trigger: TCCCGCGGCTGTTTCCAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597790.5
CDS TCA 72 bp TGCGCGCGGGGGTCTCGTGGACGGCCTCTCGCGGAGTaGACTACTCCTGTTGCCCTGGGTTCCCTTGCTCTG +
Preference number: 6 (lower is better)
Translates to: CARGSRGRPLAE*TTPVALGSLAL
Trigger: CAGAGCAAGGGAACCCAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCGTCCACGAGACCCCCGCGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000595730.5
ENST00000597130.5
ENST00000598168.5
ENST00000599105.5
CDS CCA 72 bp AGTGTGGCTGGCAGAACCCAGCCTGAACGGACCACGTaGGCCGCGGGACGTAGTTGGCTCTGCGCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: SVAGRTQPERTT*AAGRSWLCAEA
Trigger: AGCCTCTGCGCAGAGCCAACTACGTCCCGCGGCCCACGTGGTCCGTTCAGGCTGGGTTCTGCCAGCCACACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS TCA 72 bp CCTGCCCTCTGGAGCCTCATTCTCCCACACCCTGGGTaGTGGCCCAGCTGGCTCTACCCCATTGGGACCGTC +
Preference number: 6 (lower is better)
Translates to: PALWSLILPHPG*WPSWLYPIGTV
Trigger: GACGGTCCCAATGGGGTAGAGCCAGCTGGGCCATCACCCAGGGTGTGGGAGAATGAGGCTCCAGAGGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS GCA 72 bp AGCCTGCACCCTGGGGGATCCTCTTCCCAAAGCCCCTaGCCTCTGGAGCCTCATTCTCCCACACCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: SLHPGGSSSQSP*PLEPHSPTPWV
Trigger: CACCCAGGGTGTGGGAGAATGAGGCTCCAGAGGGCAGGGGCTTTGGGAAGAGGATCCCCCAGGGTGCAGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 72 bp GGGTCTGCGCCCAGGGGCCAGGGCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGG +
Preference number: 6 (lower is better)
Translates to: GSAPRGQGVTLG*SEKERLLHCSW
Trigger: CCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGGGCGCAGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS CCA 72 bp GCCCTGTCTCACCCCAGTCTGTGCTGCAGGCTGAGCTaGCCTCATCAGTGCCTGGGACATCAGGGTCCGGAC +
Preference number: 6 (lower is better)
Translates to: ALSHPSLCCRLS*PHQCLGHQGPD
Trigger: GTCCGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCTCAGCCTGCAGCACAGACTGGGGTGAGACAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595730.5
CDS CCA 72 bp GACGGCCTCTCGCGGAGTGAACTACTCCTGTTGCCCTaGAAACAGCCGCGGGAGGCGCGAATTACCGAGGGG +
Preference number: 6 (lower is better)
Translates to: DGLSRSELLLLP*KQPREARITEG
Trigger: CCCCTCGGTAATTCGCGCCTCCCGCGGCTGTTTCCAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597790.5
CDS GCA 72 bp GCTGAGCTGCTGCTGCCCTGCGGCCCCACAGGTGACTaGGACTGTGACTGTGACTCCTGCTGCTGTTTCCGA +
Preference number: 6 (lower is better)
Translates to: AELLLPCGPTGD*DCDCDSCCCFR
Trigger: TCGGAAACAGCAGCAGGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS GCA 72 bp TCGTGGACGGCCTCTCGCGGAGTGAACTACTCCTGTTaGCCTGGAAACAGCCGCGGGAGGCGCGAATTACCG +
Preference number: 6 (lower is better)
Translates to: SWTASRGVNYSC*PGNSRGRRELP
Trigger: CGGTAATTCGCGCCTCCCGCGGCTGTTTCCAGGGCAACAGGAGTAGTTCACTCCGCGAGAGGCCGTCCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597790.5
CDS CCA 72 bp ATCCCTGCCTCCTTGCACTTGCGCAGCCGGCACTGCTaGCACTTGCGCCGCATGAAAGCGTCCATCTGGCAG +
Preference number: 6 (lower is better)
Translates to: IPASLHLRSRHC*HLRRMKASIWQ
Trigger: CTGCCAGATGGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS CCA 72 bp CAGGCCCTGGATGTCCCTCCGCCTGCAGGGCCCTTCTaGATCCTCGGTGACGTCTTCTTGGGGACGTATGTG +
Preference number: 6 (lower is better)
Translates to: QALDVPPPAGPF*ILGDVFLGTYV
Trigger: CACATACGTCCCCAAGAAGACGTCACCGAGGATCCAGAAGGGCCCTGCAGGCGGAGGGACATCCAGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CAA 72 bp CACACCCTGGGTGATGGCCCAGCTGGCTCTACCCCATaGGGACCGTCACACTCAAGGTTGTGGAGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: HTLGDGPAGSTP*GPSHSRLWRGQ
Trigger: CTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCCAGCTGGGCCATCACCCAGGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CAA 72 bp GTGGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCTaGGGACTGCGTAAGTCTAGGCGGCAGGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: VAGWRETIMQVC*GLRKSRRQGLC
Trigger: GCAGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CAA 90 bp CTGCGGATGGTGGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCTaGGGACTGCGTAAGTCTAGGCGGCAGGGCCTCTGCACACAGGAC +
Preference number: 6 (lower is better)
Translates to: LRMVAGWRETIMQVC*GLRKSRRQGLCTQD
Trigger: GTCCTGTGTGCAGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS TCA 72 bp TGCGTCACGTCCGGAAGAGGGGCGGAGCGTGAAACTTaGCGAACTTCCGGTCCGCTTAGGACCAGCCGAAGC +
Preference number: 6 (lower is better)
Translates to: CVTSGRGAERET*RTSGPLRTSRS
Trigger: GCTTCGGCTGGTCCTAAGCGGACCGGAAGTTCGTCAAGTTTCACGCTCCGCCCCTCTTCCGGACGTGACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS GCA 72 bp CTTCCCGTGTCCTCTTTCAGTCCAGCCTGTCCCCCTTaGGCGGGAAAGTCCTCCATCTCTAGTTCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: LPVSSFSPACPP*AGKSSISSSRP
Trigger: GGGGCGGGAACTAGAGATGGAGGACTTTCCCGCGCAAGGGGGACAGGCTGGACTGAAAGAGGACACGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000600355.5
CDS GCA 72 bp ATGGTGGCCGGGTGGAGGGAGACGATCATGCAGGTTTaGTTGGGACTGCGTAAGTCTAGGCGGCAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: MVAGWRETIMQV*LGLRKSRRQGL
Trigger: GAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS GCA 72 bp CTCTGCGGATGGTGGCCGGGTGGAGGGAGACGATCATaGAGGTTTGCTTGGGACTGCGTAAGTCTAGGCGGC +
Preference number: 6 (lower is better)
Translates to: LCGWWPGGGRRS*RFAWDCVSLGG
Trigger: GCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 72 bp ACACCCTGGGTGATGGCCCAGCTGGCTCTACCCCATTaGGACCGTCACACTCAAGGTTGTGGAGGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: TPWVMAQLALPH*DRHTQGCGGGS
Trigger: ACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCCAGCTGGGCCATCACCCAGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 72 bp TGGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCTTaGGACTGCGTAAGTCTAGGCGGCAGGGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: WPGGGRRSCRFA*DCVSLGGRASA
Trigger: TGCAGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CAA 72 bp CAGGGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: QGVTLGWSEKER*LHCSWAATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS CAA 90 bp CCCAGGGGCCAGGGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTAGT +
Preference number: 6 (lower is better)
Translates to: PRGQGVTLGWSEKER*LHCSWAATNCWIIS
Trigger: ACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS CAA 90 bp GATGGCCCAGCTGGCTCTACCCCATTGGGACCGTCACACTCAAGGTaGTGGAGGGGGCAGTACCGTGACTTTGGGCTGGTCGGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: DGPAGSTPLGPSHSR*WRGQYRDFGLVGEG
Trigger: TCCTTCTCCGACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCCAGCTGGGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CAA 90 bp TCATTCTCCCACACCCTGGGTGATGGCCCAGCTGGCTCTACCCCATaGGGACCGTCACACTCAAGGTTGTGGAGGGGGCAGTACCGTGAC +
Preference number: 6 (lower is better)
Translates to: SFSHTLGDGPAGSTP*GPSHSRLWRGQYRD
Trigger: GTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCCAGCTGGGCCATCACCCAGGGTGTGGGAGAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CAA 90 bp ACGGGCTCCCAGGCAAATGGCCGTCCTTGTGGCCGCGACACCCAGTaGTCGTCTTGTTGCCTTGCAGACTACTCGAAATGGCGTCCGCCT +
Preference number: 6 (lower is better)
Translates to: TGSQANGRPCGRDTQ*SSCCLADYSKWRPP
Trigger: AGGCGGACGCCATTTCGAGTAGTCTGCAAGGCAACAAGACGACAACTGGGTGTCGCGGCCACAAGGACGGCCATTTGCCTGGGAGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS GCA 72 bp CTGTTCTTCAGAAAGGACGCACTGCTCCCTCATCCCTaGCTCCTTGCACTTGCGCAGCCGGCACTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: LFFRKDALLPHP*LLALAQPALLA
Trigger: TGCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAGTGCGTCCTTTCTGAAGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS GCA 72 bp GGTGGAGGGAGACGATCATGCAGGTTTGCTTGGGACTaGGTAAGTCTAGGCGGCAGGGCCTCTGCACACAGG +
Preference number: 6 (lower is better)
Translates to: GGGRRSCRFAWD*VSLGGRASAHR
Trigger: CCTGTGTGCAGAGGCCCTGCCGCCTAGACTTACGCAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 72 bp GGCTCTACCCCATTGGGACCGTCACACTCAAGGTTGTaGAGGGGGCAGTACCGTGACTTTGGGCTGGTCGGA +
Preference number: 6 (lower is better)
Translates to: GSTPLGPSHSRL*RGQYRDFGLVG
Trigger: TCCGACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 72 bp CGTGTCTACACTGCGACTCTGCGGATGGTGGCCGGGTaGAGGGAGACGATCATGCAGGTTTGCTTGGGACTG +
Preference number: 6 (lower is better)
Translates to: RVYTATLRMVAG*RETIMQVCLGL
Trigger: CAGTCCCAAGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CAA 72 bp GGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCCACCAACTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: GVTLGWSEKERL*HCSWAATNCWI
Trigger: GATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS CAA 72 bp GCTGGCTCTACCCCATTGGGACCGTCACACTCAAGGTaGTGGAGGGGGCAGTACCGTGACTTTGGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: AGSTPLGPSHSR*WRGQYRDFGLV
Trigger: GACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGTCCCAATGGGGTAGAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS TCA 72 bp AGTTGGGCCGCCACCAACTGCTGGATCATTAGTTCTTaGGCCGCTGTTAGCTGGACACCCTCGCCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: SWAATNCWIISS*AAVSWTPSPSP
Trigger: CGGGGAAGGCGAGGGTGTCCAGCTAACAGCGGCTCAAGAACTAATGATCCAGCAGTTGGTGGCGGCCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593532.5
ENST00000593926.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS GCA 72 bp GTGGAGGAATTGAGGACACTTTCCACGTGTCTACACTaGGACTCTGCGGATGGTGGCCGGGTGGAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: VEELRTLSTCLH*DSADGGRVEGD
Trigger: GTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGACACGTGGAAAGTGTCCTCAATTCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CCA 72 bp CATCTTCGGGGCTGGGCCCTTCTTTCGCTTGCGCTCTaGTTCCTCTTCGGGATCTGGGATGACCCAGTCTGT +
Preference number: 6 (lower is better)
Translates to: HLRGWALLSLAL*FLFGIWDDPVC
Trigger: ACAGACTGGGTCATCCCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCCAGCCCCGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253727.10
ENST00000593532.5
ENST00000593926.5
ENST00000597130.5
ENST00000597157.1
ENST00000597790.5
ENST00000598168.5
ENST00000599105.5
ENST00000652203.1
CDS CAA 72 bp TCCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCCACCAACTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: SVTLGWSEKERL*HCSWAATNCWI
Trigger: GATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598168.5
CDS CAA 72 bp ATCTCCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: ISVTLGWSEKER*LHCSWAATNCW
Trigger: CCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598168.5
CDS CAA 90 bp AGGGGCCAGGGCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTAGTTCT +
Preference number: 6 (lower is better)
Translates to: RGQGVTLGWSEKERL*HCSWAATNCWIISS
Trigger: AGAACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253727.10
ENST00000411902.6
ENST00000593926.5
ENST00000652203.1
CDS TCA 72 bp ACCGTCACACTCAAGGTTGTGGAGGGGGCAGTACCGTaGCTTTGGGCTGGTCGGAGAAGGAGCGTTTGTTGC +
Preference number: 6 (lower is better)
Translates to: TVTLKVVEGAVP*LWAGRRRSVCC
Trigger: GCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTGACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 72 bp CAAGGTTGTGGAGGGGGCAGTACCGTGACTTTGGGCTaGTCGGAGAAGGAGCGTTTGTTGCACTGCAGTTGG +
Preference number: 6 (lower is better)
Translates to: QGCGGGSTVTLG*SEKERLLHCSW
Trigger: CCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 72 bp ACTTTCCACGTGTCTACACTGCGACTCTGCGGATGGTaGCCGGGTGGAGGGAGACGATCATGCAGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: TFHVSTLRLCGW*PGGGRRSCRFA
Trigger: AGCAAACCTGCATGATCGTCTCCCTCCACCCGGCCACCATCCGCAGAGTCGCAGTGTAGACACGTGGAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CAA 72 bp CACACTCAAGGTTGTGGAGGGGGCAGTACCGTGACTTaGGGCTGGTCGGAGAAGGAGCGTTTGTTGCACTGC +
Preference number: 6 (lower is better)
Translates to: HTQGCGGGSTVT*GWSEKERLLHC
Trigger: GCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGTACTGCCCCCTCCACAACCTTGAGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597085.1
CDS CCA 72 bp AATTCCCGCCATCCTCCATCCCTGGCAGTAGCTGCATaGCACAGAGAGAAGGTTTTTCCGCAAGGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: NSRHPPSLAVAA*HREKVFPQGWG
Trigger: TCCCCACCCTTGCGGAAAAACCTTCTCTCTGTGCCATGCAGCTACTGCCAGGGATGGAGGATGGCGGGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS CCA 72 bp TTGGCAGAAGAGTTCCGAACCCATTTCCTCGCTTCTTaGGAGCCAAACCTCCAGCCCCGCGCTTTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: LAEEFRTHFLAS*EPNLQPRALWL
Trigger: AAGCCACAAAGCGCGGGGCTGGAGGTTTGGCTCCCAAGAAGCGAGGAAATGGGTTCGGAACTCTTCTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS CCA 72 bp CCTCCATCTCTAGTTCCCGCCCCATGCAGTCTCATCTaGACCGTTTCTACTTTCTGCGGCCCTGTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PPSLVPAPCSLI*TVSTFCGPVSS
Trigger: GGAAGAGACAGGGCCGCAGAAAGTAGAAACGGTCCAGATGAGACTGCATGGGGCGGGAACTAGAGATGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600355.5
CDS CAA 72 bp CAGGCAAATGGCCGTCCTTGTGGCCGCGACACCCAGTaGTCGTCTTGTTGCCTTGCAGACTACTCGAAATGG +
Preference number: 6 (lower is better)
Translates to: QANGRPCGRDTQ*SSCCLADYSKW
Trigger: CCATTTCGAGTAGTCTGCAAGGCAACAAGACGACAACTGGGTGTCGCGGCCACAAGGACGGCCATTTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652203.1
CDS CAA 90 bp CTACTGGGACTTGGCAGAAGAGTTCCGAACCCATTTCCTCGCTTCTaGGGAGCCAAACCTCCAGCCCCGCGCTTTGTGGCTTTAGCTCAT +
Preference number: 6 (lower is better)
Translates to: LLGLGRRVPNPFPRF*GAKPPAPRFVALAH
Trigger: ATGAGCTAAAGCCACAAAGCGCGGGGCTGGAGGTTTGGCTCCCAAGAAGCGAGGAAATGGGTTCGGAACTCTTCTGCCAAGTCCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593532.5
CDS CAA 90 bp TCCACGATCTCCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTTGTaGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTAGTTCT +
Preference number: 6 (lower is better)
Translates to: STISVTLGWSEKERL*HCSWAATNCWIISS
Trigger: AGAACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGAGATCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598168.5
CDS CAA 90 bp AAGTCCACGATCTCCGTGACTTTGGGCTGGTCGGAGAAGGAGCGTTaGTTGCACTGCAGTTGGGCCGCCACCAACTGCTGGATCATTAGT +
Preference number: 6 (lower is better)
Translates to: KSTISVTLGWSEKER*LHCSWAATNCWIIS
Trigger: ACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCAAAGTCACGGAGATCGTGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598168.5
CDS CAA 72 bp CAAGGGCCACCATCCGAGGGCTTCGAGTCTAAGTCTTaGTTCTTCCCGTGTCCTCTTTCAGTCCAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: QGPPSEGFESKS*FFPCPLSVQPV
Trigger: GACAGGCTGGACTGAAAGAGGACACGGGAAGAACAAAGACTTAGACTCGAAGCCCTCGGATGGTGGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593532.5
ENST00000600978.1
CDS CAA 72 bp TGCCTGGCATACAGAAGCACTCGGTCACTGGCAGTTTaGTTGTCTGAAGGTAGGTTTTTCCGCAAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: CLAYRSTRSLAV*LSEGRFFRKGG
Trigger: CCCACCCTTGCGGAAAAACCTACCTTCAGACAACAAAACTGCCAGTGACCGAGTGCTTCTGTATGCCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600978.1
CDS CAA 90 bp GAAGCGCAGTGCCTGGCATACAGAAGCACTCGGTCACTGGCAGTTTaGTTGTCTGAAGGTAGGTTTTTCCGCAAGGGTGGGGAAATAGTC +
Preference number: 6 (lower is better)
Translates to: EAQCLAYRSTRSLAV*LSEGRFFRKGGEIV
Trigger: GACTATTTCCCCACCCTTGCGGAAAAACCTACCTTCAGACAACAAAACTGCCAGTGACCGAGTGCTTCTGTATGCCAGGCACTGCGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600978.1
CDS CCA 72 bp CTCACCGGAAGTTTACCGGGTAGATCTACTGGGACTTaGCAGAAGAGTTCCGAACCCATTTCCTCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LTGSLPGRSTGT*QKSSEPISSLL
Trigger: AAGAAGCGAGGAAATGGGTTCGGAACTCTTCTGCCAAGTCCCAGTAGATCTACCCGGTAAACTTCCGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593532.5