RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPRL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000103148

Ensembl transcript IDs: ENST00000399953.7, ENST00000419636.1, ENST00000422814.5, ENST00000456528.5, ENST00000457916.5, ENST00000464069.1, ENST00000468260.5, ENST00000473674.5, ENST00000483663.5, ENST00000610509.1, ENST00000611875.5, ENST00000621703.4, ENST00000622194.4

Found 942 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGAACCACCAGGGGCAAGGACAGCGGGGCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCATCCACCCAATGCCAGGCCTCAGGGC +
Preference number: 1 (lower is better)
Translates to: AEPPGARTAGLCRLH*ATASPHPPNARPQG
Trigger: GCCCTGAGGCCTGGCATTGGGTGGATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAGCCCCGCTGTCCTTGCCCCTGGTGGTTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR TCA 90 bp CGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGA +
Preference number: 1 (lower is better)
Translates to: RTPHPGAPGSAWPPG*GTGSGAPRAAARWR
Trigger: TCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp TCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGG +
Preference number: 1 (lower is better)
Translates to: SSWSARISLASRVRY*QRRSSCCSTVAIRR
Trigger: CCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR TCA 90 bp GAAGGGGACGTCGTCCTCTCGCGGACGGGGCTCCTCCTCGCTGGGTaGGGCCATCAGGCAGACATAGGTGTGCAGCTGGATGAGAAGCCG +
Preference number: 1 (lower is better)
Translates to: EGDVVLSRTGLLLAG*GHQADIGVQLDEKP
Trigger: CGGCTTCTCATCCAGCTGCACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAGAGGACGACGTCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp ACGGGGCTTGCGTCTTGCTGCGAGCACTGGAGCCCCTGGAAGGTCTaGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCG +
Preference number: 1 (lower is better)
Translates to: TGLASCCEHWSPWKV*RPCVSFAAPSGKAP
Trigger: CGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAGGGGCTCCAGTGCTCGCAGCAAGACGCAAGCCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR GCA 90 bp ATCAGCTTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAG +
Preference number: 1 (lower is better)
Translates to: ISLASRVRYWQRRSS*CSTVAIRRDRLCRQ
Trigger: CTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp GCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGGATGGCTaGGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCAT +
Preference number: 1 (lower is better)
Translates to: AEVLRVLGCGYTEDG*AFMLRQAGQQVLRH
Trigger: ATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 90 bp TGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTaGGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGT +
Preference number: 1 (lower is better)
Translates to: WQTCGGPQGSGLRVH*GWLRVHAPTGWPAG
Trigger: ACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 90 bp CTATGTCCGGGGCAGCCCCTGGGTCAGTGTGGTCGACAGAGTGGCTaGGCAGGACACACAGGCCTGAGCAAAGGGCCTGCCCAGACAAGA +
Preference number: 1 (lower is better)
Translates to: LCPGQPLGQCGRQSG*AGHTGLSKGPAQTR
Trigger: TCTTGTCTGGGCAGGCCCTTTGCTCAGGCCTGTGTGTCCTGCTCAGCCACTCTGTCGACCACACTGACCCAGGGGCTGCCCCGGACATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR GCA 90 bp AGCTTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTT +
Preference number: 1 (lower is better)
Translates to: SLASRVRYWQRRSSC*STVAIRRDRLCRQF
Trigger: AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp ATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTaGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTT +
Preference number: 1 (lower is better)
Translates to: ISVGAESPRGWGPAQ*AMPPPARCAQVTGL
Trigger: AAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp ATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGG +
Preference number: 1 (lower is better)
Translates to: INPCLELALPPGHES*GPEYVAPGPVWMLG
Trigger: CCCCAGCATCCACACCGGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp CGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTaGTTCAGTGGCGAGTCCCCGCTGGGAAGTAGCTCTGCGCTGGAG +
Preference number: 1 (lower is better)
Translates to: RSCSDRLASRFSVIL*FSGESPLGSSSALE
Trigger: CTCCAGCGCAGAGCTACTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 90 bp GGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTGTGGACTGTGGTGAGGACTGGGCCA +
Preference number: 1 (lower is better)
Translates to: GPRAPDGQDQVTAWL*ACLRLLWTVVRTGP
Trigger: TGGCCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGAC +
Preference number: 1 (lower is better)
Translates to: ENHQCGSRKPPRVGS*TVGHASTSKMCTGD
Trigger: GTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp TCAGGGTTCTGGGCTGCGGGTACACTGAGGATGGCTGCGCGTTCATaGTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGTTC +
Preference number: 1 (lower is better)
Translates to: SGFWAAGTLRMAARS*SDRLASRFSVILWF
Trigger: GAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp GTGAAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTaGGGGTACACTGAGGATGGCTGCGCGTTCATGCTCCGACAGGCT +
Preference number: 1 (lower is better)
Translates to: VKEPGKHAEVLRVLG*GYTEDGCAFMLRQA
Trigger: AGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp ATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTaGGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCA +
Preference number: 1 (lower is better)
Translates to: MLGRIISVGAESPRG*GPAQWAMPPPARCA
Trigger: TGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR TCA 90 bp ATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTaGGTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCAT +
Preference number: 1 (lower is better)
Translates to: MSGASSSSRTRELGA*VRSARPGVDAGENH
Trigger: ATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp CGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATaGAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGCCCCAGA +
Preference number: 1 (lower is better)
Translates to: RSSCCSTVAIRRDRL*RQFITDGSALACPR
Trigger: TCTGGGGCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
3UTR CCA 90 bp GCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTaGGTGGTCACCACCAGCACGCTGCGGAACTTGTCAAACAGCATG +
Preference number: 1 (lower is better)
Translates to: AQGSRAWKTAMTGSS*VVTTSTLRNLSNSM
Trigger: CATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp TGTGCCAGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTaGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTCCCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: CARPWPSTRALTRGT*HRMKLYGWSVVPWS
Trigger: GCTCCAGGGGACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCTGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR TCA 90 bp AAGGAGACCGGCAAGGAGAACTTGGCAAGAACGGACGGCAGGTCATaGGATGGGAACTGGTGGGAGAACTGCTCGGCCAGCGGGGAGTAC +
Preference number: 1 (lower is better)
Translates to: KETGKENLARTDGRS*DGNWWENCSASGEY
Trigger: GTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 90 bp GAGCTGGGTCTCCTGCACAGCGGGGGCCAGGGGATTCCTAAATTCTaGCAAGGAGACCGGCAAGGAGAACTTGGCAAGAACGGACGGCAG +
Preference number: 1 (lower is better)
Translates to: ELGLLHSGGQGIPKF*QGDRQGELGKNGRQ
Trigger: CTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGTCTCCTTGTCAGAATTTAGGAATCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp CGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATaGAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGCA +
Preference number: 1 (lower is better)
Translates to: RSSCCSTVAIRRDRL*RQFITDGSALALSA
Trigger: TGCACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
3UTR CCA 90 bp GACCGGCAAGGAGAACTTGGCAAGAACGGACGGCAGGTCATGAGATaGGAACTGGTGGGAGAACTGCTCGGCCAGCGGGGAGTACAGACA +
Preference number: 1 (lower is better)
Translates to: DRQGELGKNGRQVMR*ELVGELLGQRGVQT
Trigger: TGTCTGTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp AACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATaGCTGGAGCGTGGTCCCCTGGAGCCCAGTGAGCCGGCTGTAGTG +
Preference number: 1 (lower is better)
Translates to: NKSFDQRDLAQDEAV*LERGPLEPSEPAVV
Trigger: CACTACAGCCGGCTCACTGGGCTCCAGGGGACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR CCA 90 bp CTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATaGGGACTGAGGACCTTCATTTCCATCAGCCATGGCGGACACCTC +
Preference number: 1 (lower is better)
Translates to: LEVPGQLALGQDVME*GLRTFISISHGGHL
Trigger: GAGGTGTCCGCCATGGCTGATGGAAATGAAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 90 bp GTCACCACCAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTaGGAGCGCCGCGTGTTCTCGTTGTACATAATCTCCTCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: VTTSTLRNLSNSMSS*ERRVFSLYIISSRW
Trigger: CCACCTGGAGGAGATTATGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp TGGAAAACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGATGTGGTCTTGATCACCCGCACTAGG +
Preference number: 1 (lower is better)
Translates to: WKTCSKARSASWASC*RFFTADVVLITRTR
Trigger: CCTAGTGCGGGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 90 bp AGCTGGAAAACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCAGATGTGGTCTTGATCACCCGCACT +
Preference number: 1 (lower is better)
Translates to: SWKTCSKARSASWAS*CRFFTADVVLITRT
Trigger: AGTGCGGGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCGCCAGGCCCGGTGTaGATGCTGGGGAGAATCATC +
Preference number: 2 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWAPGPV*MLGRII
Trigger: GATGATTCTCCCCAGCATCCACACCGGGCCTGGCGC...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp AGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCTCCTCCAGCGTGGAGATaGCTACGCGTGCGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: RRERPPAHPSSLPPSAWAPPAWR*LRVRQG
Trigger: TCCTTGCCGCACGCGTAGGCATCTCCACGCTGGAGG...AGCCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGACAGAAGGAGGGTCTaGGAAACGCACAGCCCACAT +
Preference number: 2 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWDRRRV*ETHSPH
Trigger: ATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGTC...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp AGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCTCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 2 (lower is better)
Translates to: RRERPPAHPSSLPPSAWAPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...AGCCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGCCCCAGTACACCAGATaGGCTGCAAGCTGGAAAACC +
Preference number: 2 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWPQYTR*AASWKT
Trigger: GGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGG...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGGCTATGAGCCTGTTTaGGGCTTCTGTGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWGYEPV*GFCGLW
Trigger: CCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCC...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp AGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCTCTGCACAGTGGGCCATaGCTCCACCAGCAAGATGTG +
Preference number: 2 (lower is better)
Translates to: RRERPPAHPSSLPPSAWALHSGP*LHQQDV
Trigger: CACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAG...AGCCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CAA 90 bp CCATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGC +
Preference number: 2 (lower is better)
Translates to: PSAMADTSSWSARIS*ASRVRYWQRRSSCC
Trigger: GCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCCGAGAGCTGGGGGCCTaGGTACGTAGCGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: GRSGDHASASQHPPERHRRELGA*VRSARP
Trigger: GGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCG...GCGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR TCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 2 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 2 (lower is better)
Translates to: EVLAAALLVLQHGGDTTGRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...TCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 2 (lower is better)
Translates to: EVLAAALLVLQHGGDTTGQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...TCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCGGTGGGCGTCGGCCATaGAGGGGAGTGGGCCCGGAA +
Preference number: 2 (lower is better)
Translates to: GRSGDHASASQHPPERHRGGRRP*RGVGPE
Trigger: TTCCGGGCCCACTCCCCTGCATGGCCGACGCCCACC...GCGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCCGTGTCCTCAAGGACCGCGAGCTCTGCAGTGGCCCCTCCAAGCTGTGCCAGGAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: AVSSRTASSAVAPPSCARRVATD*GVQGAG
Trigger: ACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCT...CCTGGCACAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTTGAGGACACGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CCA 90 bp TGGGCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGAAAGCCCCCGAGGGTaGGGTCCTGCACAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: WAQGSRAWKTAMTGSSWVESPRG*GPAQWA
Trigger: GGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTC...CACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCAAGCCCACATGGGCCTTaGAGGATGCGGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPSPHGP*RMRPHP
Trigger: TGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCT...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp AGTGAGCCGGCTGTAGTGGCAGCAGCCCGGGTGGGCGTCGGCCATGCAGGGGAGCAAGATGTGCACAGGTaGCAGGGCTTCTCCAGCCTA +
Preference number: 2 (lower is better)
Translates to: SEPAVVAAARVGVGHAGEQDVHR*QGFSSL
Trigger: TAGGCTGGAGAAGCCCTGTCACCTGTGCACATCTTG...CTCCCCTGCATGGCCGACGCCCACCCGGGCTGCTGCCACTACAGCCGGCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR TCA 90 bp AAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 2 (lower is better)
Translates to: KEPGKHAEVLRVLGCGYTAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...AGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCACCTCCAGCGTGGAGATaGCTACGCGTGCGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPPPAWR*LRVRQG
Trigger: TCCTTGCCGCACGCGTAGGCATCTCCACGCTGGAGG...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CTCGCGGACGGGGCTCCTCCTCGCTGGGTGAGGCCATCAGGCAGACATAGGTGTCCTCCAGCGTGGAGATaGCTACGCGTGCGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: LADGAPPRWVRPSGRHRCPPAWR*LRVRQG
Trigger: TCCTTGCCGCACGCGTAGGCATCTCCACGCTGGAGG...ACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGACAGCCCAGGCCCTCGTaGCCCAGATGGTCAGGACCA +
Preference number: 2 (lower is better)
Translates to: RSARPGVDAGENHQCGSRQPRPS*PRWSGP
Trigger: TGGTCCTGACCATCTGGGGCACGAGGGCCTGGGCTG...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCC +
Preference number: 2 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVPRVGS*TVGHAS
Trigger: GGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGG...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 2 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAATGAGCTGGGTCTCCTaGACAGCGGGGGCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: RSARPGVDAGENHQCGSRMSWVS*TAGARG
Trigger: TCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCAT...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp AGTGAGCCGGCTGTAGTGGCAGCAGCCCGGGTGGGCGTCGGCCATGCAGGGGAGTACACTGAGGATGGCTaGGCGTTCATGCTCCGACAG +
Preference number: 2 (lower is better)
Translates to: SEPAVVAAARVGVGHAGEYTEDG*AFMLRQ
Trigger: CTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTA...CTCCCCTGCATGGCCGACGCCCACCCGGGCTGCTGCCACTACAGCCGGCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR-3UTR CCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAALCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GGCCAGCAGGTTCTCCGTCATCCTCTGGTTCAGTGGCGAGTCCCCGCTGGGAAGGGGGCTCCTCCTCGCTaGGTGAGGCCATCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GQQVLRHPLVQWRVPAGKGAPPR*VRPSGR
Trigger: TCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCC...CTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATGACGGAGAACCTGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGCAGCCCAGGCCCTCGTaGCCCAGATGGTCAGGACCA +
Preference number: 2 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRQPRPS*PRWSGP
Trigger: TGGTCCTGACCATCTGGGGCACGAGGGCCTGGGCTG...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCTCTGCTGCACAGTGGGCCATaGCTCCACCAGCAAGATGTG +
Preference number: 2 (lower is better)
Translates to: QHPPERHRQPCPQGPRALLHSGP*LHQQDV
Trigger: CACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAG...CAGAGCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR GCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCC +
Preference number: 2 (lower is better)
Translates to: PCLELALPPGHESWGPEYPRVGS*TVGHAS
Trigger: GGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGG...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCC +
Preference number: 2 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRPRVGS*TVGHAS
Trigger: GGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGG...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp ACTGAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 2 (lower is better)
Translates to: TEDGCAFMLRQAGQQVLRRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...ACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGAACTGGTGGGAGAACTaGTCGGCCAGCGGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: AARTGGKRRNTEGSSPTANWWEN*SASGEY
Trigger: GTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTT...CGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTAGCGCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: LELALPPGHESWGPEYVALCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGLCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CCGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGGGAGAATCATCAGTGTaGGAGCCGAAAGCCCCCGAG +
Preference number: 2 (lower is better)
Translates to: PHPPNARPQGQEGSASARGESSV*EPKAPE
Trigger: CTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCC...CCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp TTCGCAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCGCCCGGTGTGGATGCTaGGGAGAATCATCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: FAAPSGKAPPAVSSRTASARCGC*GESSVW
Trigger: CCACACTGATGATTCTCCCCAGCATCCACACCGGGC...GCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTGCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CCA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: QPTWALKDAASPRDRSPGRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGTTCAGTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 2 (lower is better)
Translates to: AFMLRQAGQQVLRHPLVQSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...CTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGAGCCCACATGGGCCTTaGAGGATGCGGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGSPHGP*RMRPHP
Trigger: TGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCT...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCACATGGGCCTTaGAGGATGCGGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: VAPGPVWMLGRIISVGAESPHGP*RMRPHP
Trigger: TGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCT...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp CGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: RVRYWQRRSSCCSTVAIRQTVYH*RVCVGP
Trigger: AGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
3UTR-3UTR TCA 90 bp GCCGTGTCCTCAAGGACCGCGAGCTCTGCAGTGGCCCCTCCAAGCTGTGCCAGGCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: AVSSRTASSAVAPPSCARQTVYH*RVCVGP
Trigger: AGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...CCTGGCACAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTTGAGGACACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR-3UTR TCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 2 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRSQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGAGGTGTGCAGCTGGATaGGAAGCCGGCGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: EPGKHAEVLRVLGCGYTERCAAG*EAGAAA
Trigger: TGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCT...CTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAACCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: VAPGPVWMLGRIISVGAEPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGTTCAGCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: AFMLRQAGQQVLRHPLVQLCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...CTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: VRSARPGVDAGENHQCGSRVATD*GVQGAG
Trigger: ACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCT...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAGACTGTGGTGAGGACTaGGCCAGGAAAGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: RSARPGVDAGENHQCGSRDCGED*ARKGSG
Trigger: CCCTGAGCCTTTCCTGGCCCAGTCCTCACCACAGTC...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCCCTCGTGCCCCAGATaGTCAGGACCAGGTCACAGC +
Preference number: 2 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGPSCPR*SGPGHS
Trigger: GCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGG...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGCCCTCGTGCCCCAGATaGTCAGGACCAGGTCACAGC +
Preference number: 2 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRPSCPR*SGPGHS
Trigger: GCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGG...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp ACTGAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCG +
Preference number: 2 (lower is better)
Translates to: TEDGCAFMLRQAGQQVLRPGHES*GPEYVA
Trigger: CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGG...ACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACACCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 2 (lower is better)
Translates to: ALLVLQHGGDTTGQVMQTPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTAGCGCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: LELALPPGHESWGPEYVARAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTCTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 2 (lower is better)
Translates to: ALTRGTWHRMKLYGWSVVSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...GACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR-3UTR CCA 90 bp GGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCCATGCTCCGACAGGCTaGCCAGCAGGTTCTCCGTCA +
Preference number: 2 (lower is better)
Translates to: GRSGDHASASQHPPERHRHAPTG*PAGSPS
Trigger: TGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATG...GCGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR CAA 90 bp CAGCCCAGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCGGCTTCTGTGGACTGTGGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: QPRPSCPRWSGPGHS*AMSLFAASVDCGED
Trigger: GTCCTCACCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGAGCCCACATGGGCCTTaGAGGATGCGGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRSPHGP*RMRPHP
Trigger: TGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCT...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGCAGAGCTCCTCTAGGTaGTCAACCCATGTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRQSSSR*STHVWS
Trigger: GCTCCAGACATGGGTTGATCACCTAGAGGAGCTCTG...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 2 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 2 (lower is better)
Translates to: AARSCSDRLASRFSVILWPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...CCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAACTCCTCCTCGCTGGGTaGGGCCATCAGGCAGACATA +
Preference number: 2 (lower is better)
Translates to: VAPGPVWMLGRIISVGAELLLAG*GHQADI
Trigger: TATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAG...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGCCATGCTGGGGCTGGTaGGGGTCATGTCATCGCTGC +
Preference number: 2 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRPCWGW*GSCHRC
Trigger: GCAGCGATGACATGACCCTCACCAGCCCCAGCATGG...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GCAGACATAGGTGTGCAGCTGGATGAGAAGCCGGCGCTGCAGCATCCACACCACCCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: ADIGVQLDEKPALQHPHHPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...GTGGTGTGGATGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTACGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 2 (lower is better)
Translates to: CLELALPPGHESWGPEYVRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GTGGTCTTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 2 (lower is better)
Translates to: VVLITRTRAGEQSIGSSPQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...GGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 2 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGAGGAAGAAGCGCATaGCAGACAGAGGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVGGRSA*QTEVLG
Trigger: CCCCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCC...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp AGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGGGAGGAAGAAGCGCATaGCAGACAGAGGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RPSCPRWSGPGHSLAMSLGGRSA*QTEVLG
Trigger: CCCCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCC...CAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGAGGCTCAGGGTAGCCTaGGAGGAAGAAGCGCATGGC +
Preference number: 2 (lower is better)
Translates to: VWMLGRIISVGAESPRGWRLRVA*EEEAHG
Trigger: GCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCT...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 2 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 2 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CAA 90 bp TGGTTCAGTGGCGAGTCCCCGCTGGGAAGTAGCTCTGCGCTGGAGTaGTCCATGCTGGGGCTGGTGAGGGTCATGTCATCGCTGCTGGTT +
Preference number: 2 (lower is better)
Translates to: WFSGESPLGSSSALE*SMLGLVRVMSSLLV
Trigger: AACCAGCAGCGATGACATGACCCTCACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTCCCAGCGGGGACTCGCCACTGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CAA 90 bp ATGACAGGGTCCTCGTGGGTGGTCACCACCAGCACGCTGCGGAACTaGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGTTG +
Preference number: 2 (lower is better)
Translates to: MTGSSWVVTTSTLRN*SNSMSSWERRVFSL
Trigger: CAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGACTTGTCAAACAGCATaGGCAGCTGGGAGCGCCGCG +
Preference number: 2 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRTCQTA*AAGSAA
Trigger: CGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGT...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCCCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: LVPQMVRTRSQLGYEPVCPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...GCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGTCCACCAGCAAGATGTaGACAGGTGACAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: AARTGGKRRNTEGSSPTASTSKM*TGDRAS
Trigger: AGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGA...CGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGATCTGCCCCAGAGCATaGTGTAGCAGTGTTGGGTGC +
Preference number: 2 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLICPRA*CSSVGC
Trigger: GCACCCAACACTGCTACAGCATGCTCTGGGGCAGAT...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR GCA 90 bp ACTGAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 2 (lower is better)
Translates to: TEDGCAFMLRQAGQQVLRGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...ACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCGGAGCCTGGCAAACATaGGGAGGTCCTCAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: VGHASTSKMCTGDRASPAGAWQT*GGPQGS
Trigger: AGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCC...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGGAGGAAGAAGCGCATaGCAGACAGAGGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PCLELALPPGHESWGPEYGGRSA*QTEVLG
Trigger: CCCCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCC...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCAGGCTCAGGGTAGCCTaGGAGGAAGAAGCGCATGGC +
Preference number: 2 (lower is better)
Translates to: DQPMSGASSSSRTRELGARLRVA*EEEAHG
Trigger: GCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCT...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTAGGCTCAGGGTAGCCTaGGAGGAAGAAGCGCATGGC +
Preference number: 2 (lower is better)
Translates to: QHAAELVKQHEQLGAPRVRLRVA*EEEAHG
Trigger: GCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCT...AACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCGACTGTGGTGAGGACTaGGCCAGGAAAGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLDCGED*ARKGSG
Trigger: CCCTGAGCCTTTCCTGGCCCAGTCCTCACCACAGTC...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp AAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGACTGTGGTGAGGACTaGGCCAGGAAAGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: KEPGKHAEVLRVLGCGYTDCGED*ARKGSG
Trigger: CCCTGAGCCTTTCCTGGCCCAGTCCTCACCACAGTC...AGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCACCACTGTTTGCGGCTTCTGTaGACTGTGGTGAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: GEQSLEDGNDRVLVGGHHCLRLL*TVVRTG
Trigger: CCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACA...GTGGTGACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCGCCCGGTGTGGATGCTaGGGAGAATCATCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: VGHASTSKMCTGDRASPAARCGC*GESSVW
Trigger: CCACACTGATGATTCTCCCCAGCATCCACACCGGGC...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTGCCCGGTGTGGATGCTaGGGAGAATCATCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: DGCAFMLRQAGQQVLRHPARCGC*GESSVW
Trigger: CCACACTGATGATTCTCCCCAGCATCCACACCGGGC...AGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CTTCTCATCACTGAGCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LLITEQQQGMVGADGFQAPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...AGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGCTCAGTGATGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GTGGTCTTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: VVLITRTRAGEQSIGSSPRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...GGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: QHAAELVKQHEQLGAPRVARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...AACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCAGACATAGGTGTGCAGCTGGATGAGAAGCCGGCGCTGCAGCATCCACACCACGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: ADIGVQLDEKPALQHPHHARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...GTGGTGTGGATGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGCCGGCAAGGAGAACTTaGCAAGAACGGACGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGPARRT*QERTAG
Trigger: ACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGG...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCCAAGATGTGCACAGGTaGCAGGGCTTCTCCAGCCTA +
Preference number: 2 (lower is better)
Translates to: VGHASTSKMCTGDRASPAQDVHR*QGFSSL
Trigger: TAGGCTGGAGAAGCCCTGTCACCTGTGCACATCTTG...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp AGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACAGGGACAGGCCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: RGPQGTSQIEGCQRDRDRPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...CCTGTCCCTGTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 2 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGCAAGCTGGAAAACCTaGAGCAAGGCCAGGTCCGCA +
Preference number: 2 (lower is better)
Translates to: PCLELALPPGHESWGPEYASWKT*SKARSA
Trigger: TGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCTTGC...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTTGTTTGCGGCTTCTGTaGACTGTGGTGAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: DGCAFMLRQAGQQVLRHPCLRLL*TVVRTG
Trigger: CCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACA...AGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CAGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAACCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCG +
Preference number: 2 (lower is better)
Translates to: QALAINKSFDQRDLAQDEPGHES*GPEYVA
Trigger: CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGG...TTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCTGTCATAAGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 2 (lower is better)
Translates to: AVISFLEVPGQLALGQDVPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...CACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 2 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp CCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGGATGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: PGKHAEVLRVLGCGYTEDVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...ATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GGAACTGGTGGGAGAACTGCTCGGCCAGCGGGGAGTACAGACATACGCTGGCATGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: GTGGRTARPAGSTDIRWHVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...ATGCCAGCGTATGTCTGTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCCAGAGCTCCTCTAGGTaGTCAACCCATGTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLQSSSR*STHVWS
Trigger: GCTCCAGACATGGGTTGATCACCTAGAGGAGCTCTG...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp AACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGTTGTACATAATCTCCTCCGGGCTGCGGGTACACTaGGGATGGCTGCGCGTTCAT +
Preference number: 2 (lower is better)
Translates to: NSMSSWERRVFSLYIISSGLRVH*GWLRVH
Trigger: ATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCC...GGAGGAGATTATGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAAGGACAGCGGGGCTCTaGAGGCTTCACTGGGCCACG +
Preference number: 2 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTRTAGL*RLHWAT
Trigger: CGTGGCCCAGTGAAGCCTGCAGAGCCCCGCTGTCCT...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGGCTATGAGCCTGTTTaGGGCTTCTGTGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRGYEPV*GFCGLW
Trigger: CCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCC...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CACCAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGAACTACGCCCGACGTaGACAGGCTGTCATAAGCTT +
Preference number: 2 (lower is better)
Translates to: HQHAAELVKQHEQLGAPRELRPT*TGCHKL
Trigger: AAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTC...ACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCA +
Preference number: 2 (lower is better)
Translates to: VRSARPGVDAGENHQCGSASWAS*CRFFTA
Trigger: TGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp AGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACAGGGACAGGAACGCACAGCCCACATaGGCCTTGAAGGATGCGGCC +
Preference number: 2 (lower is better)
Translates to: RGPQGTSQIEGCQRDRDRNAQPT*ALKDAA
Trigger: GGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT...CCTGTCCCTGTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp ACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 2 (lower is better)
Translates to: TRTRAGEQSIGSSPSKDFHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...GAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 2 (lower is better)
Translates to: LVPQMVRTRSQLGYEPVCHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...GCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CGCGGAAGTAGTGAAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCGGCAGGTCATGAGATaGGAACTGGTGGGAGAACTG +
Preference number: 2 (lower is better)
Translates to: RGSSEGAWQTCGGPQGSGRQVMR*ELVGEL
Trigger: CAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCG...CCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACTTCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTACCGGCAAGGAGAACTTaGCAAGAACGGACGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CLELALPPGHESWGPEYVPARRT*QERTAG
Trigger: ACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGG...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCCCACACAAGTGTTTCTaGACATTCTTCAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VGHASTSKMCTGDRASPAPHKCF*TFFRVA
Trigger: GGCCACCCTGAAGAATGTGCAGAAACACTTGTGTGG...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGTACACCAGATGAGCTaGAAGCTGGAAAACCTGCAG +
Preference number: 2 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRVHQMS*KLENLQ
Trigger: CTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTAC...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTRVATD*GVQGAG
Trigger: ACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCT...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTCTGTTTGCGGCTTCTGTaGACTGTGGTGAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: ALTRGTWHRMKLYGWSVVCLRLL*TVVRTG
Trigger: CCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACA...GACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGAGTAGTGAAGGAGCCTaGCAAACATGCGGAGGTCCT +
Preference number: 2 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRSSEGA*QTCGGP
Trigger: AGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACT...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp AACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGTTGTACATAATCTCCTCCCAGGCCCGGTGTGGATaGTGGGGAGAATCATCAGTG +
Preference number: 2 (lower is better)
Translates to: NSMSSWERRVFSLYIISSQARCG*WGESSV
Trigger: CACTGATGATTCTCCCCAGCATCCACACCGGGCCTG...GGAGGAGATTATGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGATCTGCCCCAGAGCATaGTGTAGCAGTGTTGGGTGC +
Preference number: 2 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWICPRA*CSSVGC
Trigger: GCACCCAACACTGCTACAGCATGCTCTGGGGCAGAT...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR GCA 90 bp AACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGTTGTACATAATCTCCTCCGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 2 (lower is better)
Translates to: NSMSSWERRVFSLYIISSGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...GGAGGAGATTATGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGGATTCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGAT +
Preference number: 2 (lower is better)
Translates to: PGKHAEVLRVLGCGYTEDSWASC*RFFTAD
Trigger: ATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGA...ATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp CTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGAGAATCATCAGTGTaGGAGCCGAAAGCCCCCGAG +
Preference number: 2 (lower is better)
Translates to: LGDQPMSGASSSSRTRELGESSV*EPKAPE
Trigger: CTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCC...CAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp AACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGTTGTACATAATCTCCTCCGCCCGGTGTGGATGCTaGGGAGAATCATCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: NSMSSWERRVFSLYIISSARCGC*GESSVW
Trigger: CCACACTGATGATTCTCCCCAGCATCCACACCGGGC...GGAGGAGATTATGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp AGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGCAAACCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 2 (lower is better)
Translates to: RLCRQFITDGSALALSANPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...GTTTGCACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
3UTR-3UTR CCA 90 bp GATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 2 (lower is better)
Translates to: DGCAFMLRQAGQQVLRHPQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...AGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CAA 90 bp GCATCTTGGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCA +
Preference number: 2 (lower is better)
Translates to: ASWASCCRFFTADVV*ITRTRAGEQSIGSS
Trigger: TGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR TCA 90 bp CTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LGDQPMSGASSSSRTRELVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...CAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCCCACACAAGTGTTTCTaGACATTCTTCAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: LVPQMVRTRSQLGYEPVCPHKCF*TFFRVA
Trigger: GGCCACCCTGAAGAATGTGCAGAAACACTTGTGTGG...GCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp GCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGTTCAGCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 2 (lower is better)
Translates to: AFMLRQAGQQVLRHPLVQRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...CTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR-3UTR CCA 90 bp GCATCTTGGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTTGATCACCCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 2 (lower is better)
Translates to: ASWASCCRFFTADVVLITHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...GGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGAGTACAGACATACGCTaGCATTGGGAGACAGCATGT +
Preference number: 2 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRSTDIR*HWETAC
Trigger: ACATGCTGTCTCCCAATGCCAGCGTATGTCTGTACT...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CAGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAACCACACAAGTGTTTCTaGACATTCTTCAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: QALAINKSFDQRDLAQDEPHKCF*TFFRVA
Trigger: GGCCACCCTGAAGAATGTGCAGAAACACTTGTGTGG...TTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR GCA 90 bp GTGGTCTTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAAGAATCATAGTAGGTaGTTCCCTCTTCGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VVLITRTRAGEQSIGSSPKNHSR*FPLRGR
Trigger: CCTTCCCCGAAGAGGGAAGCACCTACTATGATTCTT...GGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR GCA 90 bp CGCGGAAGTAGTGAAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGATTTCTAGAAAACTGTaGCTTAGCCAGAGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: RGSSEGAWQTCGGPQGSGISRKL*LSQSSS
Trigger: AGAGGAGCTCTGGCTAAGGCACAGTTTTCTAGAAAT...CCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACTTCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR GCA 90 bp CCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGACCTTTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTA +
Preference number: 2 (lower is better)
Translates to: PWPACTWAGCDGMGTEDLCSSVG*PTNRTL
Trigger: TAATGTGCGATTTGTTGGGCACCCAACACTGCTACA...AAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR GCA 90 bp ACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCTGCGTTGGCCCTCAGTaGAAACACCACATTAAAAAG +
Preference number: 2 (lower is better)
Translates to: TRTRAGEQSIGSSPSKDFCVGPQ*KHHIKK
Trigger: CTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCA...GAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
3UTR-3UTR CCA 90 bp TCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCGGGAAGGATCTGTTTTaGAGATCTGCCCCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: SCCSTVAIRRDRLCRQFIGKDLF*RSAPEH
Trigger: ATGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCC...GATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR GCA 90 bp TGCCCCAGTACACCAGATGAGCTGCAAGCTGGAAAACCTGCAGCAAGGCCAGGTTGCGTTGGCCCTCAGTaGAAACACCACATTAAAAAG +
Preference number: 2 (lower is better)
Translates to: CPSTPDELQAGKPAARPGCVGPQ*KHHIKK
Trigger: CTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCA...ACCTGGCCTTGCTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR-3UTR GCA 90 bp TCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 2 (lower is better)
Translates to: SCCSTVAIRRDRLCRQFIRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...GATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
3UTR-3UTR TCA 90 bp TGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGCCAGAATAACATCTaGAAACCTTGGTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: WRYDGTGYADSLSLTGLRCQNNI*KPWWWM
Trigger: CATCCACCACCAAGGTTTTCAGATGTTATTCTGGCA...ACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
3UTR-3UTR GCA 90 bp TGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTA +
Preference number: 2 (lower is better)
Translates to: WRYDGTGYADSLSLTGLRCSSVG*PTNRTL
Trigger: TAATGTGCGATTTGTTGGGCACCCAACACTGCTACA...ACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR CAA 90 bp AGTGAGCCGGCTGTAGTGGCAGCAGCCCGGGTGGGCGTCGGCCATGCAGGGGAGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 3 (lower is better)
Translates to: SEPAVVAAARVGVGHAGESARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...CTCCCCTGCATGGCCGACGCCCACCCGGGCTGCTGCCACTACAGCCGGCTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR GCA 72 bp GCTTCACTGGGCCACGGCCAGCCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGC +
Preference number: 3 (lower is better)
Translates to: ASLGHGQPASTQ*QASGPRGLSLS
Trigger: GCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGGCTGGCCGTGGCCCAGTGAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp ACAGCGGAACCACCAGGGGCAAGGACAGCGGGGCTCTaGAGGCTTCACTGGGCCACGGCCAGCCCGCATCCA +
Preference number: 3 (lower is better)
Translates to: TAEPPGARTAGL*RLHWATASPHP
Trigger: TGGATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAGCCCCGCTGTCCTTGCCCCTGGTGGTTCCGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp CATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: HPGAPGSAWPPG*GTGSGAPRAAA
Trigger: TGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp GCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATACGACGGGACAGGTTA +
Preference number: 3 (lower is better)
Translates to: ASRVRYWQRRSS*CSTVAIRRDRL
Trigger: TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp GCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTaGGTACGTAGCGCCAGGCCCGGTGTGGATGCTGGG +
Preference number: 3 (lower is better)
Translates to: ASSSSRTRELGA*VRSARPGVDAG
Trigger: CCCAGCATCCACACCGGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp CAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCCACCAGCAAGATGTGC +
Preference number: 3 (lower is better)
Translates to: QCGSRKPPRVGS*TVGHASTSKMC
Trigger: GCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp TCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGACGGGACAGGTTATGC +
Preference number: 3 (lower is better)
Translates to: SRVRYWQRRSSC*STVAIRRDRLC
Trigger: GCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp GGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTaGGCCATGCCTCCACCAGCAAGATGTGCACAGGTG +
Preference number: 3 (lower is better)
Translates to: GAESPRGWGPAQ*AMPPPARCAQV
Trigger: CACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp GGACGTCGTCCTCTCGCGGACGGGGCTCCTCCTCGCTaGGTGAGGCCATCAGGCAGACATAGGTGTGCAGCT +
Preference number: 3 (lower is better)
Translates to: GRRPLADGAPPR*VRPSGRHRCAA
Trigger: AGCTGCACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAGAGGACGACGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp GTCGTCCTCTCGCGGACGGGGCTCCTCCTCGCTGGGTaGGGCCATCAGGCAGACATAGGTGTGCAGCTGGAT +
Preference number: 3 (lower is better)
Translates to: VVLSRTGLLLAG*GHQADIGVQLD
Trigger: ATCCAGCTGCACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAGAGGACGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp TGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTaGGGATGGCTGCGCGTTCATGCTCCGACAGGCTGG +
Preference number: 3 (lower is better)
Translates to: CGGPQGSGLRVH*GWLRVHAPTGW
Trigger: CCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCGCCAGGCCCGGTGTGG +
Preference number: 3 (lower is better)
Translates to: CLELALPPGHES*GPEYVAPGPVW
Trigger: CCACACCGGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp ATGAGAAGCCGGCGCTGCAGCATCCACACCACCATCTaGATGAGCTGGGTCTCCTGCACAGCGGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: MRSRRCSIHTTI*MSWVSCTAGAR
Trigger: CCTGGCCCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp ACCAGAGGGACCTGGCACAGGATGAAGCTGTATGGCTaGAGCGTGGTCCCCTGGAGCCCAGTGAGCCGGCTG +
Preference number: 3 (lower is better)
Translates to: TRGTWHRMKLYG*SVVPWSPVSRL
Trigger: CAGCCGGCTCACTGGGCTCCAGGGGACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CAA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAGCTCTGCGCTGGAGTaGTCCATGCTGGGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: RSARPGVDAGENHQCGSRSSALE*SMLGLV
Trigger: CACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCT...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp TGGGCTGCGGGTACACTGAGGATGGCTGCGCGTTCATaGTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATC +
Preference number: 3 (lower is better)
Translates to: WAAGTLRMAARS*SDRLASRFSVI
Trigger: GATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp CTCAGGGTTCTGGGCTGCGGGTACACTGAGGATGGCTaGGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTT +
Preference number: 3 (lower is better)
Translates to: LRVLGCGYTEDG*AFMLRQAGQQV
Trigger: AACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp AGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTaGGGTCCTGCACAGTGGGCCATGCCTCCACCAGCA +
Preference number: 3 (lower is better)
Translates to: RIISVGAESPRG*GPAQWAMPPPA
Trigger: TGCTGGTGGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp AGCTGGGGGCCTGAGTACGTAGCGCCAGGCCCGGTGTaGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAA +
Preference number: 3 (lower is better)
Translates to: SWGPEYVAPGPV*MLGRIISVGAE
Trigger: TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTACTCAGGCCCCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp ACGGGGCTTGCGTCTTGCTGCGAGCACTGGAGCCCCTaGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCA +
Preference number: 3 (lower is better)
Translates to: TGLASCCEHWSP*KVWRPCVSFAA
Trigger: TGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAGGGGCTCCAGTGCTCGCAGCAAGACGCAAGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CAA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 3 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CAA 90 bp AGCTGGAAAACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 3 (lower is better)
Translates to: SWKTCSKARSASWASCCRSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...CCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CAA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGA +
Preference number: 3 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRPKLRA*GVLRLR
Trigger: TCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGG...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp CCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTaGGGGTACACTGAGGATGGCTGCGCGTTCATGCTC +
Preference number: 3 (lower is better)
Translates to: PGKHAEVLRVLG*GYTEDGCAFML
Trigger: GAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp GGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGCCGCATAGTGGATCTT +
Preference number: 3 (lower is better)
Translates to: GADGFQAPFDGL*GDQTGGRIVDL
Trigger: AAGATCCACTATGCGGCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp AGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTaGGCTGCGGGTACACTGAGGATGGCTGCGCGTTCA +
Preference number: 3 (lower is better)
Translates to: RSLANMRRSSGF*AAGTLRMAARS
Trigger: TGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp TTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATaGCTGGAGCGTGGTCCCCTGGAGCCCAGTGAGCCG +
Preference number: 3 (lower is better)
Translates to: FDQRDLAQDEAV*LERGPLEPSEP
Trigger: CGGCTCACTGGGCTCCAGGGGACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CAA 90 bp CTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTAGCGGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCG +
Preference number: 3 (lower is better)
Translates to: LELALPPGHESWGPEYVAGPGHS*AMSLFA
Trigger: CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCC...CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CAA 90 bp CTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCG +
Preference number: 3 (lower is better)
Translates to: LEGLETMRQLRSTLRKGTGPGHS*AMSLFA
Trigger: CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCC...GGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CAA 90 bp CAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCCATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCA +
Preference number: 3 (lower is better)
Translates to: QRRSSCCSTVAIRRDRLCHAVAV*GAQQIA
Trigger: TGCGATTTGTTGGGCACCCAACACTGCTACAGCATG...GCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR CAA 90 bp TCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTACTGACGGGTCTGCGTaGGCCTGCCCCAGAGCATGC +
Preference number: 3 (lower is better)
Translates to: SSCCSTVAIRRDRLCRQFTDGSA*ACPRAC
Trigger: GCATGCTCTGGGGCAGGCCAACGCAGACCCGTCAGT...AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
3UTR CCA 72 bp GGACAGAAGGAGGGTCTGAGAAACGCACAGCCCACATaGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGG +
Preference number: 3 (lower is better)
Translates to: GQKEGLRNAQPT*ALKDAASPRDR
Trigger: CCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp GGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGTTATGCAGACAGTTTA +
Preference number: 3 (lower is better)
Translates to: GTGSGAPRAAAR*RYDGTGYADSL
Trigger: TAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp GGAGAACTTGGCAAGAACGGACGGCAGGTCATGAGATaGGAACTGGTGGGAGAACTGCTCGGCCAGCGGGGA +
Preference number: 3 (lower is better)
Translates to: GELGKNGRQVMR*ELVGELLGQRG
Trigger: TCCCCGCTGGCCGAGCAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGTTCTTGCCAAGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CAA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCG +
Preference number: 3 (lower is better)
Translates to: DQPMSGASSSSRTRELGAGPGHS*AMSLFA
Trigger: CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCC...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp GCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTGTGGACTGTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: APDGQDQVTAWL*ACLRLLWTVVR
Trigger: CCTCACCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp GGCAAGGAGAACTTGGCAAGAACGGACGGCAGGTCATaGGATGGGAACTGGTGGGAGAACTGCTCGGCCAGC +
Preference number: 3 (lower is better)
Translates to: GKENLARTDGRS*DGNWWENCSAS
Trigger: GCTGGCCGAGCAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp GTGAGGCCATCAGGCAGACATAGGTGTGCAGCTGGATaGGAAGCCGGCGCTGCAGCATCCACACCACCATCT +
Preference number: 3 (lower is better)
Translates to: VRPSGRHRCAAG*EAGAAASTPPS
Trigger: AGATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGCCTGATGGCCTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR TCA 72 bp TCACCACCAGCACGCTGCGGAACTTGTCAAACAGCATaGGCAGCTGGGAGCGCCGCGTGTTCTCGTTGTACA +
Preference number: 3 (lower is better)
Translates to: SPPARCGTCQTA*AAGSAACSRCT
Trigger: TGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp TGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATaGAGACAGTTTATCACTGACGGGTCTGCGTTGGCC +
Preference number: 3 (lower is better)
Translates to: CCSTVAIRRDRL*RQFITDGSALA
Trigger: GGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
3UTR CCA 72 bp CCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTaGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTC +
Preference number: 3 (lower is better)
Translates to: PWPSTRALTRGT*HRMKLYGWSVV
Trigger: GACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR-3UTR CAA 90 bp GTGGTCTTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCCATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCA +
Preference number: 3 (lower is better)
Translates to: VVLITRTRAGEQSIGSSPHAVAV*GAQQIA
Trigger: TGCGATTTGTTGGGCACCCAACACTGCTACAGCATG...GGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR CAA 90 bp CCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTAGGGGAAGGATCTGTTTaGGAGATCTGCCCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: PRAAARWRYDGTGYADSLGEGSV*EICPRA
Trigger: TGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCCC...TAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
3UTR GCA 72 bp TGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGATGTGGTCTTGATCACC +
Preference number: 3 (lower is better)
Translates to: CSKARSASWASC*RFFTADVVLIT
Trigger: GGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR GCA 72 bp ACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCAGATGTGGTCTTGATC +
Preference number: 3 (lower is better)
Translates to: TCSKARSASWAS*CRFFTADVVLI
Trigger: GATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp CCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATaGGGACTGAGGACCTTCATTTCCATCAGCCATGGC +
Preference number: 3 (lower is better)
Translates to: PGQLALGQDVME*GLRTFISISHG
Trigger: GCCATGGCTGATGGAAATGAAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp AGCTGGAAAACCTGCAGCAAGGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTG +
Preference number: 3 (lower is better)
Translates to: SWKTCSKARSAS*ASCCRFFTADV
Trigger: CACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CAA 90 bp TCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCGGGGAAGGATCTGTTTaGGAGATCTGCCCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: SCCSTVAIRRDRLCRQFIGEGSV*EICPRA
Trigger: TGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCCC...GATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
3UTR-3UTR CAA 90 bp CTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCA +
Preference number: 3 (lower is better)
Translates to: LGDQPMSGASSSSRTRELTADVV*ITRTRA
Trigger: TGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGT...CAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CAA 90 bp AGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACCTTCAGTTCAAATTTTaGGCCACACATTTCAGACTT +
Preference number: 3 (lower is better)
Translates to: RYWQRRSSCCSTVAIRRDLQFKF*ATHFRL
Trigger: AAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAG...GTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
3UTR CCA 72 bp AAGTGTTTCTGCACATTCTTCAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGTGTAGGGACAGAAGGA +
Preference number: 3 (lower is better)
Translates to: KCFCTFFRVATD*GVQGAGVGTEG
Trigger: TCCTTCTGTCCCTACACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCTGAAGAATGTGCAGAAACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CCA 72 bp AGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTaGGAGCGCCGCGTGTTCTCGTTGTACATAATCTCC +
Preference number: 3 (lower is better)
Translates to: STLRNLSNSMSS*ERRVFSLYIIS
Trigger: GGAGATTATGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR-3UTR CAA 90 bp ATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGACATTTCAGACTTGGTaGCCAAAATTGTTGCCAGAA +
Preference number: 3 (lower is better)
Translates to: ISHGGHLILERQDQLGLPTFQTW*PKLLPE
Trigger: TTCTGGCAACAATTTTGGCAACCAAGTCTGAAATGT...CGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
3UTR TCA 72 bp GATACGACGGGACAGGTTATGCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCCTCAGTGCAAACACCAC +
Preference number: 3 (lower is better)
Translates to: DTTGQVMQTVYH*RVCVGPQCKHH
Trigger: GTGGTGTTTGCACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
3UTR GCA 72 bp TTGGCCTGCCCCAGAGCATGCTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTATCAATCTTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: LACPRACCSSVG*PTNRTLSIFSS
Trigger: TGAACTGAAGATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGTGGCAGCAGCCCGGGTaGGCGTCGGCCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGWQQPG*ASAMQG
Trigger: CCCCTGCATGGCCGACGCCCACCCGGGCTGCTGCCA...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGPRVGS*TVGHAS
Trigger: GGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGG...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGTGGAGCGTGGTCCCCTaGAGCCCAGTGAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWWSVVP*SPVSRL
Trigger: CAGCCGGCTCACTGGGCTCCAGGGGACCACGCTCCA...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp CCGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGGGGCGTTGGGCGTGCTaGGGCTGCGACCGCCGACCC +
Preference number: 4 (lower is better)
Translates to: PHPPNARPQGQEGSASARGRWAC*GCDRRP
Trigger: GGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCC...CCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCTATGAGCTGGGTCTCCTaGACAGCGGGGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRERPPAHPSSLPPSAWAMSWVS*TAGARG
Trigger: TCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCAT...AGCCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGCTCCTCCTCGCTGGGTaGGGCCATCAGGCAGACATA +
Preference number: 4 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWLLLAG*GHQADI
Trigger: TATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAG...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGAACTGGTGGGAGAACTaGTCGGCCAGCGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWNWWEN*SASGEY
Trigger: GTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTT...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGGTGGGCGTCGGCCATaGAGGGGAGTGGGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LASRVRYWQRRSSCCSTVGGRRP*RGVGPE
Trigger: TTCCGGGCCCACTCCCCTGCATGGCCGACGCCCACC...CACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR TCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGTCACCAGAATCACGCTaGTGGGGCTGGTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGSPESR*WGWCCP
Trigger: GGGACAACACCAGCCCCATCAGCGTGATTCTGGTGA...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGGCGTTGGGCGTGCTaGGGCTGCGACCGCCGACCC +
Preference number: 4 (lower is better)
Translates to: QQGMVGADGFQAPFDGLWGRWAC*GCDRRP
Trigger: GGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCC...CCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTTGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCAGTGAAGGGGACGTCGTCCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: VGRAEAATADPGSEGDVVQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...GACGACGTCCCCTTCACTGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ASRVRYWQRRSSCCSTVARAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...CGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCAGGATGAAGCTGTATaGCTGGAGCGTGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGQDEAV*LERGPL
Trigger: CAGGGGACCACGCTCCAGCCATACAGCTTCATCCTG...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCCGCCGACCCGGGCAGTaGAGGGGACGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPRRPGQ*RGRRPL
Trigger: GAGAGGACGACGTCCCCTTCACTGCCCGGGTCGGCG...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCGGGCGTTGGGCGTGCTaGGGCTGCGACCGCCGACCC +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSGRWAC*GCDRRP
Trigger: GGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCC...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGCGAGAGCTGGGGGCCTaGGTACGTAGCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRRELGA*VRSARP
Trigger: GGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCG...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGATCCCCTGGAGCCCAGTaGGCCGGCTGTAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVRYWQRRSSCCSTVAIRSPGAQ*AGCSGS
Trigger: GCTGCCACTACAGCCGGCTCACTGGGCTCCAGGGGA...TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp GTTGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCAGTGAAGGGGACGTCGTCCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: VGRAEAATADPGSEGDVVRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...GACGACGTCCCCTTCACTGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGCGGCAGGTCATGAGATaGGAACTGGTGGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGRQVMR*ELVGEL
Trigger: CAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCG...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGTGTTTGCGGCTTCTGTaGACTGTGGTGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGCLRLL*TVVRTG
Trigger: CCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACA...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTTGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCAGTGAAGGGGACGTCGTCGCGCCAGGCCCGGTGTaGATGCTGGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: VGRAEAATADPGSEGDVVAPGPV*MLGRII
Trigger: GATGATTCTCCCCAGCATCCACACCGGGCCTGGCGC...GACGACGTCCCCTTCACTGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
3UTR CAA 72 bp TCATCGCTGCTGGTTGGGGAGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLLVGEPKLRA*GVLRLRPPTRA
Trigger: TGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGGCTCCCCAACCAGCAGCGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: AQGSRAWKTAMTGSSWVVAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...GACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 4 (lower is better)
Translates to: ASRVRYWQRRSSCCSTVASQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...CGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCGGGCGTTGGGCGTGCTaGGGCTGCGACCGCCGACCC +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLGRWAC*GCDRRP
Trigger: GGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCC...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCACCACCGAGAGCTGGGGGCCTaGGTACGTAGCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GEQSLEDGNDRVLVGGHHRELGA*VRSARP
Trigger: GGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCG...GTGGTGACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTTGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCAGTGAAGGGGACGTCGTCAACTGGTGGGAGAACTaGTCGGCCAGCGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: VGRAEAATADPGSEGDVVNWWEN*SASGEY
Trigger: GTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTT...GACGACGTCCCCTTCACTGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACCAGCCCAGGCCCTCGTaGCCCAGATGGTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RYWQRRSSCCSTVAIRRDQPRPS*PRWSGP
Trigger: TGGTCCTGACCATCTGGGGCACGAGGGCCTGGGCTG...GTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 4 (lower is better)
Translates to: ASRVRYWQRRSSCCSTVAHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...CGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGAGTAGTGAAGGAGCCTaGCAAACATGCGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGSSEGA*QTCGGP
Trigger: AGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACT...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CAA 72 bp ATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: MADTSSWSARIS*ASRVRYWQRRS
Trigger: GGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: LEGLETMRQLRSTLRKGTAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...GGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGAAGGTGTGCAGCTGGATaGGAAGCCGGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EVLAAALLVLQHGGDTTGRCAAG*EAGAAA
Trigger: TGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCT...TCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAACGCCGACCCGGGCAGTaGAGGGGACGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VAPGPVWMLGRIISVGAERRPGQ*RGRRPL
Trigger: GAGAGGACGACGTCCCCTTCACTGCCCGGGTCGGCG...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGCCGACCCGGGCAGTaGAGGGGACGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSRRPGQ*RGRRPL
Trigger: GAGAGGACGACGTCCCCTTCACTGCCCGGGTCGGCG...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGAGCCAAAGCTGAGGGCGTTGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCGACAGAAGGAGGGTCTaGGAAACGCACAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: GAKAEGVGRAEAATADPGDRRRV*ETHSPH
Trigger: ATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGTC...GCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAGAGCTGGGGGCCTaGGTACGTAGCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSRELGA*VRSARP
Trigger: GGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCG...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGGCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: QGMVGADGFQAPFDGLWGQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...CCCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TTCGCAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCCCTCCAGCGTGGAGATaGCTACGCGTGCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: FAAPSGKAPPAVSSRTASPPAWR*LRVRQG
Trigger: TCCTTGCCGCACGCGTAGGCATCTCCACGCTGGAGG...GCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTGCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGCCACACAAGTGTTTCTaGACATTCTTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWPHKCF*TFFRVA
Trigger: GGCCACCCTGAAGAATGTGCAGAAACACTTGTGTGG...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCACAGCCCAGGCCCTCGTaGCCCAGATGGTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPQPRPS*PRWSGP
Trigger: TGGTCCTGACCATCTGGGGCACGAGGGCCTGGGCTG...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAPRVGS*TVGHAS
Trigger: GGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAGHGRGGWLSGSVRWPPRVGS*TVGHAS
Trigger: GGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGG...AGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTGGGCGTCGGCCATaGAGGGGAGTGGGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: VWMLGRIISVGAESPRGWGGRRP*RGVGPE
Trigger: TTCCGGGCCCACTCCCCTGCATGGCCGACGCCCACC...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCACGCGGCTTACTTGTCTaGGACGCCGGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPRGLLV*DAGCSW
Trigger: CCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCG...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACTGACGGGTCTGCGTTaGCCTGCCCCAGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: EVLAAALLVLQHGGDTTGLTGLR*PAPEHA
Trigger: AGCATGCTCTGGGGCAGGCCAACGCAGACCCGTCAG...TCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CCA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: QPTWALKDAASPRDRSPGSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: AAAGHGRGGWLSGSVRWPSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...AGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PHPPNARPQGQEGSASARPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...CCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGACATACGCTGGCATTaGGAGACAGCATGTAGACGT +
Preference number: 4 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWDIRWH*ETACRR
Trigger: ACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTC...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CTTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTACCATCTGGATGAGCTaGGTCTCCTGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGLPGEVLAAALLVLQHGTIWMS*VSCTAG
Trigger: CCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGT...ACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCAGGGGCTCCTCCTCGCTaGGTGAGGCCATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPGAPPR*VRPSGR
Trigger: TCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCC...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGGGGGCTCCTCCTCGCTaGGTGAGGCCATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRGAPPR*VRPSGR
Trigger: TCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCC...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGAACAGCATGAGCAGCTaGGAGCGCCGCGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LASRVRYWQRRSSCCSTVNSMSS*ERRVFS
Trigger: CGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT...CACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGCTTCCGCCCTCCGCCTaGGCTCAGGGGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVLPPSA*AQGSRA
Trigger: GGCTCTGCTCCCCTGAGCCCAGGCGGAGGGCGGAAG...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCCGCCCTCCGCCTaGGCTCAGGGGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGLPPSA*AQGSRA
Trigger: GGCTCTGCTCCCCTGAGCCCAGGCGGAGGGCGGAAG...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCGAAAGCCCCCGAGGGTaGGGTCCTGCACAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AQGSRAWKTAMTGSSWVVESPRG*GPAQWA
Trigger: GGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTC...GACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGAACCACGAAAGCCCCCGAGGGTaGGGTCCTGCACAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLEGSVGTQRAAAPQRNHESPRG*GPAQWA
Trigger: GGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTC...GTGGTTCCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCTCTGGCCCCTGGGTCAGTGTaGTCGACAGAGTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QHPPERHRQPCPQGPRALAPGSV*STEWLS
Trigger: GCTCAGCCACTCTGTCGACCACACTGACCCAGGGGC...CAGAGCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp CACCAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGGCCATGCAGGGGAGTaGGCCCGGAAACCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: HQHAAELVKQHEQLGAPRGHAGE*ARKPLR
Trigger: GCGGAGGGGTTTCCGGGCCCACTCCCCTGCATGGCC...ACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp GCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGGCAGCAGCCCGGGTaGGCGTCGGCCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALVPQMVRTRSQLGYEPVWQQPG*ASAMQG
Trigger: CCCCTGCATGGCCGACGCCCACCCGGGCTGCTGCCA...AACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGTTGACCAGAGGGACCTaGCACAGGATGAAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGLTRGT*HRMKLY
Trigger: ATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAA...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GGGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGTGCCAGAATAACATCTaGAAACCTGGAATCGCCGTC +
Preference number: 4 (lower is better)
Translates to: GRRERPPAHPSSLPPSAWCQNNI*KPGIAV
Trigger: GACGGCGATTCCAGGTTTTCAGATGTTATTCTGGCA...CCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR TCA 90 bp CGCGGAAGTAGTGAAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: RGSSEGAWQTCGGPQGSGAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...CCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACTTCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TTCGCAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCACGGACGGCAGGTCATaGGATGGGAACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FAAPSGKAPPAVSSRTASTDGRS*DGNWWE
Trigger: CTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGT...GCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTGCGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GCCGTGTCCTCAAGGACCGCGAGCTCTGCAGTGGCCCCTCCAAGCTGTGCCAGGACGGACGGCAGGTCATaGGATGGGAACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AVSSRTASSAVAPPSCARTDGRS*DGNWWE
Trigger: CTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGT...CCTGGCACAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTTGAGGACACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCCGCCGACCCGGGCAGTaGAGGGGACGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLRRPGQ*RGRRPL
Trigger: GAGAGGACGACGTCCCCTTCACTGCCCGGGTCGGCG...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTCGCGGACGGGGCTCCTCCTCGCTGGGTGAGGCCATCAGGCAGACATAGGTGTGGGCTGCGGGTACACTaGGGATGGCTGCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: LADGAPPRWVRPSGRHRCGLRVH*GWLRVH
Trigger: ATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCC...ACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCAGCCCACATGGGCCTTaGAGGATGCGGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPSPHGP*RMRPHP
Trigger: TGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCT...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACCGAGAGCTGGGGGCCTaGGTACGTAGCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYRELGA*VRSARP
Trigger: GGGCCTGGCGCTACGTACTCAGGCCCCCAGCTCTCG...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCTCCCCTGGAGCCCAGTaGGCCGGCTGTAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPSPGAQ*AGCSGS
Trigger: GCTGCCACTACAGCCGGCTCACTGGGCTCCAGGGGA...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 4 (lower is better)
Translates to: QPTWALKDAASPRDRSPGRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 4 (lower is better)
Translates to: AAAGHGRGGWLSGSVRWPRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...AGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCCCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGCCTCCAGCGTGGAGATaGCTACGCGTGCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AARTGGKRRNTEGSSPTAPPAWR*LRVRQG
Trigger: TCCTTGCCGCACGCGTAGGCATCTCCACGCTGGAGG...CGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCCCTCCAGCGTGGAGATaGCTACGCGTGCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPPPAWR*LRVRQG
Trigger: TCCTTGCCGCACGCGTAGGCATCTCCACGCTGGAGG...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAGGGCTTGCGTCTTGCTaGGAGCACTGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSARPGVDAGENHQCGSRGLASC*EHWSPW
Trigger: CCAGGGGCTCCAGTGCTCGCAGCAAGACGCAAGCCC...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp AGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: RPSCPRWSGPGHSLAMSLSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...CAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: AQPTWALKDAASPRDRSPSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 4 (lower is better)
Translates to: LASRVRYWQRRSSCCSTVHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...CACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGAGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: EVLAAALLVLQHGGDTTGARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...TCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCTCTGGTCATCGCTGCTGGTTaGGGAGCCAAAGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: QHPPERHRQPCPQGPRALVIAAG*GAKAEG
Trigger: GCCCTCAGCTTTGGCTCCCCAACCAGCAGCGATGAC...CAGAGCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp AGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACGTCATCGCTGCTGGTTaGGGAGCCAAAGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RYWQRRSSCCSTVAIRRDVIAAG*GAKAEG
Trigger: GCCCTCAGCTTTGGCTCCCCAACCAGCAGCGATGAC...GTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGAAACAGCATGAGCAGCTaGGAGCGCCGCGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: RVRYWQRRSSCCSTVAIRNSMSS*ERRVFS
Trigger: CGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT...TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCCAGGGTCCTCGTGGGTaGTCACCACCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GRSGDHASASQHPPERHRQGPRG*SPPARC
Trigger: GCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTG...GCGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp TTCGCAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCCAGGGGAGCAGAGCCTaGAAGACGGCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: FAAPSGKAPPAVSSRTASQGSRA*KTAMTG
Trigger: CCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTG...GCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GCCGTGTCCTCAAGGACCGCGAGCTCTGCAGTGGCCCCTCCAAGCTGTGCCAGGCAGGGGAGCAGAGCCTaGAAGACGGCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: AVSSRTASSAVAPPSCARQGSRA*KTAMTG
Trigger: CCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTG...CCTGGCACAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTTGAGGACACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp ACTGGGCCAGGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACACTTCCGCCCTCCGCCTaGGCTCAGGGGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TGPGKAQGSLGGRSAWQTLPPSA*AQGSRA
Trigger: GGCTCTGCTCCCCTGAGCCCAGGCGGAGGGCGGAAG...TGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCCTGGCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGAAAGCCCCCGAGGGTaGGGTCCTGCACAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGESPRG*GPAQWA
Trigger: GGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTC...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGGCCATGCAGGGGAGTaGGCCCGGAAACCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYGHAGE*ARKPLR
Trigger: GCGGAGGGGTTTCCGGGCCCACTCCCCTGCATGGCC...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp CCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGACCTTGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: PWPACTWAGCDGMGTEDLAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...AAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp AGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 4 (lower is better)
Translates to: RYWQRRSSCCSTVAIRRDPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...GTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTCGCGGACGGGGCTCCTCCTCGCTGGGTGAGGCCATCAGGCAGACATAGGTGTACGGACGGCAGGTCATaGGATGGGAACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LADGAPPRWVRPSGRHRCTDGRS*DGNWWE
Trigger: CTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGT...ACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCATGCTGGGGCTGGTaGGGGTCATGTCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAPCWGW*GSCHRC
Trigger: GCAGCGATGACATGACCCTCACCAGCCCCAGCATGG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGCCATGCTGGGGCTGGTaGGGGTCATGTCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: AARSCSDRLASRFSVILWPCWGW*GSCHRC
Trigger: GCAGCGATGACATGACCCTCACCAGCCCCAGCATGG...CCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCTGGAAGACGGCAATaGCAGGGTCCTCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAPGRRQ*QGPRGW
Trigger: CCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCTCTGGCAGCTTATTGCCCCTaGTCCCCGAGCTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: QHPPERHRQPCPQGPRALAAYCP*SPSSPE
Trigger: TTCTGGTGAGCTCGGGGAGCAGGGGCAATAAGCTGC...CAGAGCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACATGGTCGCCCGTGTTaGTGGCAGCGTATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RVRYWQRRSSCCSTVAIRHGRPC*WQRICY
Trigger: GTAGCAGATACGCTGCCAGCAACACGGGCGACCATG...TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGCTGGAATCGCCGTCCTaGTCATCAGCATGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: AARTGGKRRNTEGSSPTALESPS*SSAWSP
Trigger: GGGCGACCATGCTGATGAGCAGGACGGCGATTCCAG...CGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTACTGGAATCGCCGTCCTaGTCATCAGCATGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: WQRRSSCCSTVAIRRDRLLESPS*SSAWSP
Trigger: GGGCGACCATGCTGATGAGCAGGACGGCGATTCCAG...TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTA +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGCSSVG*PTNRTL
Trigger: TAATGTGCGATTTGTTGGGCACCCAACACTGCTACA...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR GCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGATGAGCTGGGTCTCCTaGACAGCGGGGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVMSWVS*TAGARG
Trigger: TCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCAT...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTATGAGCTGGGTCTCCTaGACAGCGGGGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGMSWVS*TAGARG
Trigger: TCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCAT...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGATGAGCTGGGTCTCCTaGACAGCGGGGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVMSWVS*TAGARG
Trigger: TCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCAT...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGCTCAGGGTTCTGGGCTaGGGGTACACTGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: AARTGGKRRNTEGSSPTALRVLG*GYTEDG
Trigger: GCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAG...CGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCTCTGGGAGCCTGGCAAACATaGGGAGGTCCTCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QHPPERHRQPCPQGPRALGAWQT*GGPQGS
Trigger: AGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCC...CAGAGCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGCCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: AARSCSDRLASRFSVILWPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...CCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGGACAGCGGGGCTCTaGAGGCTTCACTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPRTAGL*RLHWAT
Trigger: CGTGGCCCAGTGAAGCCTGCAGAGCCCCGCTGTCCT...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGAGGACAGCGGGGCTCTaGAGGCTTCACTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGRTAGL*RLHWAT
Trigger: CGTGGCCCAGTGAAGCCTGCAGAGCCCCGCTGTCCT...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGCCGAGGGTGGGGTCCTaGACAGTGGGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: VEMPTRAARTGGKRRNTEPRVGS*TVGHAS
Trigger: GGAGGCATGGCCCACTGTGCAGGACCCCACCCTCGG...CTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TTCGCAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCCAGGCCCGGTGTGGATaGTGGGGAGAATCATCAGTG +
Preference number: 4 (lower is better)
Translates to: FAAPSGKAPPAVSSRTASQARCG*WGESSV
Trigger: CACTGATGATTCTCCCCAGCATCCACACCGGGCCTG...GCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp AGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACCAGGCCCGGTGTGGATaGTGGGGAGAATCATCAGTG +
Preference number: 4 (lower is better)
Translates to: RYWQRRSSCCSTVAIRRDQARCG*WGESSV
Trigger: CACTGATGATTCTCCCCAGCATCCACACCGGGCCTG...GTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCGGGCTTGCGTCTTGCTaGGAGCACTGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSGLASC*EHWSPW
Trigger: CCAGGGGCTCCAGTGCTCGCAGCAAGACGCAAGCCC...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp AGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGACGGGGCTTGCGTCTTaGTGCGAGCACTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RPSCPRWSGPGHSLAMSLTGLAS*CEHWSP
Trigger: GGGGCTCCAGTGCTCGCAGCAAGACGCAAGCCCCGT...CAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp TTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGTGCTCCTGGCTTCTCTaGAAGGGGTACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: LASRVRYWQRRSSCCSTVCSWLL*KGYLNS
Trigger: GCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCA...CACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGCGCGGCTTACTTGTCTaGGACGCCGGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VWMLGRIISVGAESPRGWRGLLV*DAGCSW
Trigger: CCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCG...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGATCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RVRYWQRRSSCCSTVAIRSCSSA*SPVLLA
Trigger: TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGA...TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QQGMVGADGFQAPFDGLWPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...CCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCGGGGCTCCTCCTCGCTaGGTGAGGCCATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSGAPPR*VRPSGR
Trigger: TCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCC...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGCTCCTCCTCGCTaGGTGAGGCCATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGGAPPR*VRPSGR
Trigger: TCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCC...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGCATCCTCTGGTTCAGTaGCGAGTCCCCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRHPLVQ*RVPAGK
Trigger: CTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATG...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGCAGGGTCCTCGTGGGTaGTCACCACCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGQGPRG*SPPARC
Trigger: GCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTG...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCAGGGTCCTCGTGGGTaGTCACCACCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSQGPRG*SPPARC
Trigger: GCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTG...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTCCTTCCGCCCTCCGCCTaGGCTCAGGGGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ALTRGTWHRMKLYGWSVVLPPSA*AQGSRA
Trigger: GGCTCTGCTCCCCTGAGCCCAGGCGGAGGGCGGAAG...GACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVLCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCGACTGTGGTGAGGACTaGGCCAGGAAAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPDCGED*ARKGSG
Trigger: CCCTGAGCCTTTCCTGGCCCAGTCCTCACCACAGTC...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCACCACCCCTCGTGCCCCAGATaGTCAGGACCAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: GEQSLEDGNDRVLVGGHHPSCPR*SGPGHS
Trigger: GCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGG...GTGGTGACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGGGTGTGGTCGACAGAGTaGCTGAGCAGGACACACAGG +
Preference number: 4 (lower is better)
Translates to: RIHPMPGLRAKRAQPQHGVWSTE*LSRTHR
Trigger: CCTGTGTGTCCTGCTCAGCCACTCTGTCGACCACAC...CCCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCGCCCCTGGGTCAGTGTaGTCGACAGAGTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AQGSRAWKTAMTGSSWVVAPGSV*STEWLS
Trigger: GCTCAGCCACTCTGTCGACCACACTGACCCAGGGGC...GACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp TTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGAGCTGTGCCAGGCCCTaGCCATCAACAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LASRVRYWQRRSSCCSTVSCARP*PSTRAL
Trigger: CAAAGCTCTTGTTGATGGCCAGGGCCTGGCACAGCT...CACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCAGAGCACTGGAGCCCCTaGAAGGTCTGGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPEHWSP*KVWRPC
Trigger: GCATGGTCTCCAGACCTTCCAGGGGCTCCAGTGCTC...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
3UTR CAA 72 bp TCCTCGTGGGTGGTCACCACCAGCACGCTGCGGAACTaGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: SSWVVTTSTLRN*SNSMSSWERRV
Trigger: CACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTGGTGACCACCCACGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATCACCAGAATCACGCTaGTGGGGCTGGTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WQRRSSCCSTVAIRRDRLSPESR*WGWCCP
Trigger: GGGACAACACCAGCCCCATCAGCGTGATTCTGGTGA...TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSCCSTVAIRRDRLCRQFAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGGCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 4 (lower is better)
Translates to: QGMVGADGFQAPFDGLWGPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...CCCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 4 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAAGGTGTGCAGCTGGATaGGAAGCCGGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALLVLQHGGDTTGQVMQTRCAAG*EAGAAA
Trigger: TGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCT...TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCACTTGTCAAACAGCATaGGCAGCTGGGAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLTCQTA*AAGSAA
Trigger: CGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGT...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCCCTGGAAGACGGCAATaGCAGGGTCCTCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LEGLETMRQLRSTLRKGTPGRRQ*QGPRGW
Trigger: CCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGG...GGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCTCTGCAAGATGTGCACAGGTaGCAGGGCTTCTCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: QHPPERHRQPCPQGPRALQDVHR*QGFSSL
Trigger: TAGGCTGGAGAAGCCCTGTCACCTGTGCACATCTTG...CAGAGCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGCCAGAATCACGCTaGTGGGGCTGGTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLWPESR*WGWCCP
Trigger: GGGACAACACCAGCCCCATCAGCGTGATTCTGGCCA...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS-3UTR TCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCGGACCTGGCACAGGATaGAGCTGTATGGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAGPGTG*SCMAGA
Trigger: CGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCC...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp TGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTAGCAGCTTATTGCCCCTaGTCCCCGAGCTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: WQRRSSCCSTVAIRRDRLAAYCP*SPSSPE
Trigger: TTCTGGTGAGCTCGGGGAGCAGGGGCAATAAGCTGC...TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGGGCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGCTGGAATCGCCGTCCTaGTCATCAGCATGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: WAQGSRAWKTAMTGSSWVLESPS*SSAWSP
Trigger: GGGCGACCATGCTGATGAGCAGGACGGCGATTCCAG...CACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGCTGGAATCGCCGTCCTaGTCATCAGCATGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: ISHGGHLILERQDQLGLPLESPS*SSAWSP
Trigger: GGGCGACCATGCTGATGAGCAGGACGGCGATTCCAG...CGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAGCCTGCCCCAGAGCATaGTGTAGCAGTGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSARPGVDAGENHQCGSRACPRA*CSSVGC
Trigger: GCACCCAACACTGCTACAGCATGCTCTGGGGCAGGC...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399953.7
CDS-3UTR GCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGACATAGGTGTGCAGCTGGATGAGAAGCCGGCGCTGCAGCATCCACACCACCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 4 (lower is better)
Translates to: ADIGVQLDEKPALQHPHHRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...GTGGTGTGGATGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGAACCACAACTGGTGGGAGAACTaGTCGGCCAGCGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GLEGSVGTQRAAAPQRNHNWWEN*SASGEY
Trigger: GTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTT...GTGGTTCCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGATGGCTGCGCGTTCATaGTCCGACAGGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRMAARS*SDRLAS
Trigger: GCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCAT...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTATGGCTGCGCGTTCATaGTCCGACAGGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGMAARS*SDRLAS
Trigger: GCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCAT...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGATGGCTGCGCGTTCATaGTCCGACAGGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGMAARS*SDRLAS
Trigger: GCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCAT...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGGGAGCCTGGCAAACATaGGGAGGTCCTCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGGAWQT*GGPQGS
Trigger: AGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCC...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTCCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCAGGACAGCGGGGCTCTaGAGGCTTCACTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: DQPMSGASSSSRTRELGARTAGL*RLHWAT
Trigger: CGTGGCCCAGTGAAGCCTGCAGAGCCCCGCTGTCCT...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCCCTCCAGCGTGGAGATaGCTACGCGTGCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VGHASTSKMCTGDRASPAPPAWR*LRVRQG
Trigger: TCCTTGCCGCACGCGTAGGCATCTCCACGCTGGAGG...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGCTGCACAGTGGGCCATaGCTCCACCAGCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRLHSGP*LHQQDV
Trigger: CACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAG...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGAGACGCGAGCGCCCACCTGCGCACCCCAGCAGCCTTCCGCCCTCCGCCTGGGATTTCTAGAAAACTGTaGCTTAGCCAGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GDASAHLRTPAAFRPPPGISRKL*LSQSSS
Trigger: AGAGGAGCTCTGGCTAAGGCACAGTTTTCTAGAAAT...CCCAGGCGGAGGGCGGAAGGCTGCTGGGGTGCGCAGGTGGGCGCTCGCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGAACTACGCCCGACGTaGACAGGCATCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: QQGMVGADGFQAPFDGLWELRPT*TGISHG
Trigger: GCCATGGCTGATGCCTGTGCACGTCGGGCGTAGTTC...CCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS-3UTR GCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCAAGGACCGCGAGCTCTaGAGTGGCCCCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: VGHASTSKMCTGDRASPAKDREL*SGPSKL
Trigger: CAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTT...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACACGGGGCTTGCGTCTTaGTGCGAGCACTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYTGLAS*CEHWSP
Trigger: GGGGCTCCAGTGCTCGCAGCAAGACGCAAGCCCCGT...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGACAGGGGACGGGGCTTaGGTCTTGCTGCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: VWMLGRIISVGAESPRGWTGDGA*VLLRAL
Trigger: CAGTGCTCGCAGCAAGACGCAAGCCCCGTCCCCTGT...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSDAGCS*LLWKGY
Trigger: GTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTC...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGGATCGCGGCTTACTTGTCTaGGACGCCGGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGKHAEVLRVLGCGYTEDRGLLV*DAGCSW
Trigger: CCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCG...ATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCATCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPSCSSA*SPVLLA
Trigger: TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGA...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACACGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ALLVLQHGGDTTGQVMQTRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: AQPTWALKDAASPRDRSPRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGACCTTTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PWPACTWAGCDGMGTEDLSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...AAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGGCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WAQGSRAWKTAMTGSSWVARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...CACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGCGGCAGGTCATGAGATaGGAACTGGTGGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: PHPPNARPQGQEGSASARRQVMR*ELVGEL
Trigger: CAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCG...CCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCCCGGCAAGGAGAACTTaGCAAGAACGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPPARRT*QERTAG
Trigger: ACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGG...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGAACCACACCATCTGGATGAGCTaGGTCTCCTGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLEGSVGTQRAAAPQRNHTIWMS*VSCTAG
Trigger: CCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGT...GTGGTTCCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TCCCCGCTGGGAAGTAGCTCTGCGCTGGAGTTGTCCATGCTGGGGCTGGTGAGGACCATCTGGATGAGCTaGGTCTCCTGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SPLGSSSALELSMLGLVRTIWMS*VSCTAG
Trigger: CCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGT...CCTCACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTCCCAGCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGGAAGTAGCTCTGCGCTaGAGTTGTCCATGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQREVALR*SCPCWG
Trigger: GCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTC...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLLCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: TLRNLSNSMSSWERRVFSLCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...CGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGHASTSKMCTGDRASPARVATD*GVQGAG
Trigger: ACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCT...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGRVATD*GVQGAG
Trigger: ACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCT...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGGCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGAGGCTCAGGGTAGCCTaGGAGGAAGAAGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: WAQGSRAWKTAMTGSSWVRLRVA*EEEAHG
Trigger: GCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCT...CACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGGCGCCAGGCCCGGTGTaGATGCTGGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGAPGPV*MLGRII
Trigger: GATGATTCTCCCCAGCATCCACACCGGGCCTGGCGC...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCG +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSPGHES*GPEYVA
Trigger: CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGG...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGCCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCG +
Preference number: 4 (lower is better)
Translates to: EPGKHAEVLRVLGCGYTEPGHES*GPEYVA
Trigger: CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGG...CTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTCTGACGGGTCTGCGTTaGCCTGGAATCGCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: AQPTWALKDAASPRDRSPLTGLR*PGIAVL
Trigger: CAGGACGGCGATTCCAGGCCAACGCAGACCCGTCAG...AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS-3UTR TCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGATCACCAGAATCACGCTaGTGGGGCTGGTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RSARPGVDAGENHQCGSRSPESR*WGWCCP
Trigger: GGGACAACACCAGCCCCATCAGCGTGATTCTGGTGA...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTACAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WQRRSSCCSTVAIRRDRLQTVYH*RVCVGL
Trigger: CAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456528.5
ENST00000621703.4
CDS-3UTR TCA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGQTVYH*RVCVGL
Trigger: CAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS-3UTR TCA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 4 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLSQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAASQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp ATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 4 (lower is better)
Translates to: ISHGGHLILERQDQLGLPSQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...CGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCACCACCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 4 (lower is better)
Translates to: GEQSLEDGNDRVLVGGHHPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...GTGGTGACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCCAGCAGATGTGGTCTTaGTCACCCGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRSGDHASASQHPPERHRQQMWS*SPALGQ
Trigger: CTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTG...GCGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTAGGTGTGCAGCTGGATaGGAAGCCGGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALVPQMVRTRSQLGYEPVRCAAG*EAGAAA
Trigger: TGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCT...AACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCAGGTGTGCAGCTGGATaGGAAGCCGGCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLRCAAG*EAGAAA
Trigger: TGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCT...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGCCATGCTGGGGCTGGTaGGGGTCATGTCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLPCWGW*GSCHRC
Trigger: GCAGCGATGACATGACCCTCACCAGCCCCAGCATGG...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGGGCTGCGGGTACACTaGGGATGGCTGCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRGLRVH*GWLRVH
Trigger: ATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCC...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGGGCTGCGGGTACACTaGGGATGGCTGCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYGLRVH*GWLRVH
Trigger: ATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCC...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGAGCCCACATGGGCCTTaGAGGATGCGGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: VEMPTRAARTGGKRRNTESPHGP*RMRPHP
Trigger: TGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCT...CTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTACAAGATGTGCACAGGTaGCAGGGCTTCTCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: WQRRSSCCSTVAIRRDRLQDVHR*QGFSSL
Trigger: TAGGCTGGAGAAGCCCTGTCACCTGTGCACATCTTG...TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGGACCTGGCACAGGATaGAGCTGTATGGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: LEGLETMRQLRSTLRKGTGPGTG*SCMAGA
Trigger: CGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCC...GGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp TTCGCAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCCATCAACAAGAGCTTTaGCCAGAGGGACCTGGCACA +
Preference number: 4 (lower is better)
Translates to: FAAPSGKAPPAVSSRTASHQQEL*PEGPGT
Trigger: TGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATG...GCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGCAGCTTATTGCCCCTaGTCCCCGAGCTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLAAYCP*SPSSPE
Trigger: TTCTGGTGAGCTCGGGGAGCAGGGGCAATAAGCTGC...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGTGCTGGCAGCGTATCTaGTACGCGGCTTACTTGTCT +
Preference number: 4 (lower is better)
Translates to: PHPPNARPQGQEGSASARCWQRI*YAAYLS
Trigger: AGACAAGTAAGCCGCGTAGCAGATACGCTGCCAGCA...CCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCATGGTCGCCCGTGTTaGTGGCAGCGTATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAHGRPC*WQRICY
Trigger: GTAGCAGATACGCTGCCAGCAACACGGGCGACCATG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TCCCCGCTGGGAAGTAGCTCTGCGCTGGAGTTGTCCATGCTGGGGCTGGTGAGGCATGGTCGCCCGTGTTaGTGGCAGCGTATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: SPLGSSSALELSMLGLVRHGRPC*WQRICY
Trigger: GTAGCAGATACGCTGCCAGCAACACGGGCGACCATG...CCTCACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTCCCAGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGGTCTTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 4 (lower is better)
Translates to: VVLITRTRAGEQSIGSSPRRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...GGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: INPCLELALPPGHESWGPQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...AGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: RYWQRRSSCCSTVAIRRDASWAS*CRFFTA
Trigger: TGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC...GTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCATGAGAAGCCGGCGCTaGAGCATCCACACCACCATC +
Preference number: 4 (lower is better)
Translates to: QPTWALKDAASPRDRSPGMRSRR*SIHTTI
Trigger: GATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCAT...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTATGGCTGCGCGTTCATaGTCCGACAGGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KEPGKHAEVLRVLGCGYTMAARS*SDRLAS
Trigger: GCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCAT...AGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCTACACTGAGGATGGCTaGGCGTTCATGCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPYTEDG*AFMLRQ
Trigger: CTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTA...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTAGCGCTCAGGGTTCTGGGCTaGGGGTACACTGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LELALPPGHESWGPEYVALRVLG*GYTEDG
Trigger: GCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAG...CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCTCAGGGTTCTGGGCTaGGGGTACACTGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: EDGCAFMLRQAGQQVLRHLRVLG*GYTEDG
Trigger: GCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAG...ATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGCAGCCCAGGCCCTCGTaGCCCAGATGGTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SCPRWSGPGHSLAMSLFAQPRPS*PRWSGP
Trigger: TGGTCCTGACCATCTGGGGCACGAGGGCCTGGGCTG...CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCCGTGTCCTCAAGGACCGCGAGCTCTGCAGTGGCCCCTCCAAGCTGTGCCAGGTCCACCAGCAAGATGTaGACAGGTGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVSSRTASSAVAPPSCARSTSKM*TGDRAS
Trigger: AGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGA...CCTGGCACAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTTGAGGACACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp ATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGCTGCACAGTGGGCCATaGCTCCACCAGCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: ISHGGHLILERQDQLGLPLHSGP*LHQQDV
Trigger: CACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAG...CGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGAACCACCAGGCCCGGTGTGGATaGTGGGGAGAATCATCAGTG +
Preference number: 4 (lower is better)
Translates to: GLEGSVGTQRAAAPQRNHQARCG*WGESSV
Trigger: CACTGATGATTCTCCCCAGCATCCACACCGGGCCTG...GTGGTTCCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGATCTGCCCCAGAGCATaGTGTAGCAGTGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGICPRA*CSSVGC
Trigger: GCACCCAACACTGCTACAGCATGCTCTGGGGCAGAT...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR GCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACACAGGGGACGGGGCTTaGGTCTTGCTGCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYTGDGA*VLLRAL
Trigger: CAGTGCTCGCAGCAAGACGCAAGCCCCGTCCCCTGT...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGACATAGGTGTGCAGCTGGATGAGAAGCCGGCGCTGCAGCATCCACACCACAGTTACCAACCCACGTaGCACGCTCCGGGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: ADIGVQLDEKPALQHPHHSYQPT*HAPGSR
Trigger: TCGCGAGCCCGGAGCGTGGCACGTGGGTTGGTAACT...GTGGTGTGGATGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS-3UTR CCA 90 bp ACTGGGCCAGGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TGPGKAQGSLGGRSAWQTDAGCS*LLWKGY
Trigger: GTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTC...TGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCCTGGCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRDAGCS*LLWKGY
Trigger: GTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTC...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRGRPCC*QRICYA
Trigger: CGCGTAGCAGATACGCTGCCAGCAACACGGGCGACC...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLGRPCC*QRICYA
Trigger: CGCGTAGCAGATACGCTGCCAGCAACACGGGCGACC...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGGCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ERLRVAWEEEAHGRQRCWRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...CCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SSCCSTVAIRRDRLCRQFSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KEPGKHAEVLRVLGCGYTPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...AGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 4 (lower is better)
Translates to: AAAGHGRGGWLSGSVRWPHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...AGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TCCCCGCTGGGAAGTAGCTCTGCGCTGGAGTTGTCCATGCTGGGGCTGGTGAGGCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 4 (lower is better)
Translates to: SPLGSSSALELSMLGLVRHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...CCTCACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTCCCAGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CTCGCGGACGGGGCTCCTCCTCGCTGGGTGAGGCCATCAGGCAGACATAGGTGTCGGCAGGTCATGAGATaGGAACTGGTGGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: LADGAPPRWVRPSGRHRCRQVMR*ELVGEL
Trigger: CAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCG...ACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCGGCAAGGAGAACTTaGCAAGAACGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AAAGHGRGGWLSGSVRWPPARRT*QERTAG
Trigger: ACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGG...AGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCACCATCTGGATGAGCTaGGTCTCCTGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSTIWMS*VSCTAG
Trigger: CCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGT...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGGTCATCGCTGCTGGTTaGGGAGCCAAAGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RPSCPRWSGPGHSLAMSLVIAAG*GAKAEG
Trigger: GCCCTCAGCTTTGGCTCCCCAACCAGCAGCGATGAC...CAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGGCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGAAGTAGCTCTGCGCTaGAGTTGTCCATGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WAQGSRAWKTAMTGSSWVEVALR*SCPCWG
Trigger: GCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTC...CACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGCATCCTCTGGTTCAGTaGCGAGTCCCCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVHPLVQ*RVPAGK
Trigger: CTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATG...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACACATCCTCTGGTTCAGTaGCGAGTCCCCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ALLVLQHGGDTTGQVMQTHPLVQ*RVPAGK
Trigger: CTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATG...TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGAGGTCCTCAGGGTTCTaGGCTGCGGGTACACTGAGG +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVRSSGF*AAGTLR
Trigger: CCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCT...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCAGGTCCTCAGGGTTCTaGGCTGCGGGTACACTGAGG +
Preference number: 4 (lower is better)
Translates to: LEGLETMRQLRSTLRKGTRSSGF*AAGTLR
Trigger: CCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCT...GGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATAGGTCCTCAGGGTTCTaGGCTGCGGGTACACTGAGG +
Preference number: 4 (lower is better)
Translates to: EDGCAFMLRQAGQQVLRHRSSGF*AAGTLR
Trigger: CCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCT...ATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CTTCTCATCACTGAGCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCAGGGTCCTCGTGGGTaGTCACCACCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LLITEQQQGMVGADGFQAQGPRG*SPPARC
Trigger: GCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTG...AGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGCTCAGTGATGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTCAGGGGAGCAGAGCCTaGAAGACGGCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: AQPTWALKDAASPRDRSPQGSRA*KTAMTG
Trigger: CCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTG...AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAACGCACAGCCCACATaGGCCTTGAAGGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPNAQPT*ALKDAA
Trigger: GGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCAGACATAGGTGTGCAGCTGGATGAGAAGCCGGCGCTGCAGCATCCACACCACAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ADIGVQLDEKPALQHPHHRVATD*GVQGAG
Trigger: ACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCT...GTGGTGTGGATGCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGAGGCTCAGGGTAGCCTaGGAGGAAGAAGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVRLRVA*EEEAHG
Trigger: GCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCT...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTGACTGTGGTGAGGACTaGGCCAGGAAAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: DGCAFMLRQAGQQVLRHPDCGED*ARKGSG
Trigger: CCCTGAGCCTTTCCTGGCCCAGTCCTCACCACAGTC...AGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCCCTCGTGCCCCAGATaGTCAGGACCAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QHAAELVKQHEQLGAPRVPSCPR*SGPGHS
Trigger: GCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGG...AACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCGGAGAATCATCAGTGTaGGAGCCGAAAGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: QPTWALKDAASPRDRSPGGESSV*EPKAPE
Trigger: CTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCC...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGAACCACGCCCGGTGTGGATGCTaGGGAGAATCATCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLEGSVGTQRAAAPQRNHARCGC*GESSVW
Trigger: CCACACTGATGATTCTCCCCAGCATCCACACCGGGC...GTGGTTCCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACTGGGCCAGGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGCGCCAGGCCCGGTGTaGATGCTGGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: TGPGKAQGSLGGRSAWQTAPGPV*MLGRII
Trigger: GATGATTCTCCCCAGCATCCACACCGGGCCTGGCGC...TGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCCTGGCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGTTCAGGCGCCAGGCCCGGTGTaGATGCTGGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: AFMLRQAGQQVLRHPLVQAPGPV*MLGRII
Trigger: GATGATTCTCCCCAGCATCCACACCGGGCCTGGCGC...CTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCG +
Preference number: 4 (lower is better)
Translates to: NAQPTWALKDAASPRDRSPGHES*GPEYVA
Trigger: CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGG...ACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGCCAGGACACGAGAGCTaGGGGCCTGAGTACGTAGCG +
Preference number: 4 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRPGHES*GPEYVA
Trigger: CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGG...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCACAGGCATCAGCCATaGCGGACACCTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLHRHQP*RTPHPG
Trigger: TCCAGGATGAGGTGTCCGCCATGGCTGATGCCTGTG...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS-3UTR CCA 90 bp AAACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGTTCTTCAGGACAGGGGTGGTGGTaGACGCGGAGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: KPAARPGPHLGLAAAGSSGQGWW*TRSSAT
Trigger: TGTGGCGCTGCTCCGCGTCCACCACCACCCCTGTCC...TGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS-3UTR TCA 90 bp GCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACATCACCAGAATCACGCTaGTGGGGCTGGTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ALLVLQHGGDTTGQVMQTSPESR*WGWCCP
Trigger: GGGACAACACCAGCCCCATCAGCGTGATTCTGGTGA...TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCTCAGGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCTCTGGAAGGGGTACCTaGACAGCAGCTTATTGCCCC +
Preference number: 4 (lower is better)
Translates to: AQGSRAWKTAMTGSSWVVSGRGT*TAAYCP
Trigger: GGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGA...GACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp ATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGTCTGGAAGGGGTACCTaGACAGCAGCTTATTGCCCC +
Preference number: 4 (lower is better)
Translates to: ISHGGHLILERQDQLGLPSGRGT*TAAYCP
Trigger: GGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGA...CGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp ACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCTCATCAGCTTGGCCTCCCGGGTaGGGTACTGGCAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: TRAGEQSIGSSPSKDFSSAWPPG*GTGSGA
Trigger: AGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGC...TGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 4 (lower is better)
Translates to: VGHASTSKMCTGDRASPASQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVSQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCCAGCAGATGTGGTCTTaGTCACCCGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPQQMWS*SPALGQ
Trigger: CTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTG...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCCCAGTACACCAGATaGGCTGCAAGCTGGAAAACC +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAPQYTR*AASWKT
Trigger: GGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGACACCACCATCTGGATaGGCTGGGTCTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGTPPSG*AGSPAQ
Trigger: CTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGT...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp ACAGAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCCATGCTGGGGCTGGTaGGGGTCATGTCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: TEGGSEKRTAHMGLEGCGPCWGW*GSCHRC
Trigger: GCAGCGATGACATGACCCTCACCAGCCCCAGCATGG...GCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCACTTGTCAAACAGCATaGGCAGCTGGGAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: DQPMSGASSSSRTRELGATCQTA*AAGSAA
Trigger: CGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGT...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTACTTGTCAAACAGCATaGGCAGCTGGGAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: QHAAELVKQHEQLGAPRVTCQTA*AAGSAA
Trigger: CGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGT...AACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCCAGAGCTCCTCTAGGTaGTCAACCCATGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QPTWALKDAASPRDRSPGQSSSR*STHVWS
Trigger: GCTCCAGACATGGGTTGATCACCTAGAGGAGCTCTG...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRSGDHASASQHPPERHRQTVYH*RVCVGP
Trigger: AGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...GCGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLQTVYH*RVCVGQ
Trigger: CTGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS-3UTR GCA 90 bp GACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGCCCGGCGCTCCTCGTGCTaGAGCACGGTGGCGATACGA +
Preference number: 4 (lower is better)
Translates to: DGTGYADSLSLTGLRWPARRSSC*STVAIR
Trigger: TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCG...GGCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAACAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: QALAINKSFDQRDLAQDEQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...TTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: ALLVLQHGGDTTGQVMQTGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCGAACTACGCCCGACGTaGACAGGCTGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: QRRSSCCSTVAIRRDRLCELRPT*TGCHKL
Trigger: AAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTC...GCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRASWAS*CRFFTA
Trigger: TGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: QRRSSCCSTVAIRRDRLCASWAS*CRFFTA
Trigger: TGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC...GCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: AARTGGKRRNTEGSSPTAASWAS*CRFFTA
Trigger: TGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC...CGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAGCAAGCTGGAAAACCTaGAGCAAGGCCAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: VAPGPVWMLGRIISVGAEASWKT*SKARSA
Trigger: TGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCTTGC...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCGCAAGCTGGAAAACCTaGAGCAAGGCCAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPASWKT*SKARSA
Trigger: TGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCTTGC...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGGCAAGCTGGAAAACCTaGAGCAAGGCCAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: RPSCPRWSGPGHSLAMSLASWKT*SKARSA
Trigger: TGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCTTGC...CAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCATGAGAAGCCGGCGCTaGAGCATCCACACCACCATC +
Preference number: 4 (lower is better)
Translates to: LEGLETMRQLRSTLRKGTMRSRR*SIHTTI
Trigger: GATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCAT...GGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp AGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGATGAGAAGCCGGCGCTaGAGCATCCACACCACCATC +
Preference number: 4 (lower is better)
Translates to: RPSCPRWSGPGHSLAMSLMRSRR*SIHTTI
Trigger: GATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCAT...CAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGTCATGTCATCGCTaGTGGTTGGGGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGGSCHR*WLGSQS
Trigger: GCTTTGGCTCCCCAACCAGCAGCGATGACATGACCC...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGATACACTGAGGATGGCTaGGCGTTCATGCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: RSARPGVDAGENHQCGSRYTEDG*AFMLRQ
Trigger: CTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTA...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTAGGACAGCGGGGCTCTaGAGGCTTCACTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: PGPHLGLAAAGSSQQMWSRTAGL*RLHWAT
Trigger: CGTGGCCCAGTGAAGCCTGCAGAGCCCCGCTGTCCT...AGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCGGCTATGAGCCTGTTTaGGGCTTCTGTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAGYEPV*GFCGLW
Trigger: CCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCC...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGGGAGCAGAGCCTGGAAGACGGCAATGACAGGGTCCTCGTGGGTGGTCACCACGGCTATGAGCCTGTTTaGGGCTTCTGTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GEQSLEDGNDRVLVGGHHGYEPV*GFCGLW
Trigger: CCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCC...GTGGTGACCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGCCGAGATCACACCACTaGACTCCAGCCTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRPRSHH*TPALGD
Trigger: GTCGCCCAAGGCTGGAGTGCAGTGGTGTGATCTCGG...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp ACTGAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTAAGGTCTGGAGACCATaGGTCAGCTTCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: TEDGCAFMLRQAGQQVLRKVWRP*VSFAAP
Trigger: GGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTT...ACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp GACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGCCCGCGGCTTACTTGTCTaGGACGCCGGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DGTGYADSLSLTGLRWPARGLLV*DAGCSW
Trigger: CCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCG...GGCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CCA 90 bp TCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: SCPRWSGPGHSLAMSLFAGRPCC*QRICYA
Trigger: CGCGTAGCAGATACGCTGCCAGCAACACGGGCGACC...CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDGRPCC*QRICYA
Trigger: CGCGTAGCAGATACGCTGCCAGCAACACGGGCGACC...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGSCSSA*SPVLLA
Trigger: TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGA...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTACTGACGGGTCTGCGTTaGCCTGCCCCAGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: CLELALPPGHESWGPEYVLTGLR*PAPEHA
Trigger: AGCATGCTCTGGGGCAGGCCAACGCAGACCCGTCAG...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399953.7
CDS-3UTR CCA 90 bp CCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGCTTCCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PQMVRTRSQLGYEPVCGFPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...GAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGACGGCAGGTCATGAGATaGGAACTGGTGGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: RSARPGVDAGENHQCGSRRQVMR*ELVGEL
Trigger: CAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCG...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCCGGCAAGGAGAACTTaGCAAGAACGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSPARRT*QERTAG
Trigger: ACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGG...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGGCATGCTCCGACAGGCTaGCCAGCAGGTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: ERLRVAWEEEAHGRQRCWHAPTG*PAGSPS
Trigger: TGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATG...CCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTCATGCTCCGACAGGCTaGCCAGCAGGTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: KEPGKHAEVLRVLGCGYTHAPTG*PAGSPS
Trigger: TGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATG...AGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGAGGTCCTCAGGGTTCTaGGCTGCGGGTACACTGAGG +
Preference number: 4 (lower is better)
Translates to: TLRNLSNSMSSWERRVFSRSSGF*AAGTLR
Trigger: CCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCT...CGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCAGTAGTGAAGGAGCCTaGCAAACATGCGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPSSEGA*QTCGGP
Trigger: AGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACT...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCAACAGCATGAGCAGCTaGGAGCGCCGCGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLNSMSS*ERRVFS
Trigger: CGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACTGGGCCAGGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAAACAGCATGAGCAGCTaGGAGCGCCGCGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TGPGKAQGSLGGRSAWQTNSMSS*ERRVFS
Trigger: CGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT...TGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCCTGGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGCTGGAAAACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGCAGGGGAGCAGAGCCTaGAAGACGGCAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: SWKTCSKARSASWASCCRQGSRA*KTAMTG
Trigger: CCCTGTCATTGCCGTCTTCCAGGCTCTGCTCCCCTG...CCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGCTCTGCAGGCTTCACTaGGCCACGGCCAGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: LITRTRAGEQSIGSSPSKLCRLH*ATASPH
Trigger: ATGCGGGCTGGCCGTGGCCCAGTGAAGCCTGCAGAG...CTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCAGGGTGGCCACAGACTaGGGGGTCCAAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TRTRAGEQSIGSSPSKDFRVATD*GVQGAG
Trigger: ACCTGCTCCTTGGACCCCCCAGTCTGTGGCCACCCT...GAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTGGAGGAAGAAGCGCATaGCAGACAGAGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NAQPTWALKDAASPRDRSGGRSA*QTEVLG
Trigger: CCCCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCC...ACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGGGGAGGAAGAAGCGCATaGCAGACAGAGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ERLRVAWEEEAHGRQRCWGGRSA*QTEVLG
Trigger: CCCCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCC...CCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGACTGTGGTGAGGACTaGGCCAGGAAAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VEMPTRAARTGGKRRNTEDCGED*ARKGSG
Trigger: CCCTGAGCCTTTCCTGGCCCAGTCCTCACCACAGTC...CTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGCGGAAGTAGTGAAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGGACTGTGGTGAGGACTaGGCCAGGAAAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RGSSEGAWQTCGGPQGSGDCGED*ARKGSG
Trigger: CCCTGAGCCTTTCCTGGCCCAGTCCTCACCACAGTC...CCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACTTCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTCCCTCGTGCCCCAGATaGTCAGGACCAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: INPCLELALPPGHESWGPPSCPR*SGPGHS
Trigger: GCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGG...AGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGCTTCCCCTCGTGCCCCAGATaGTCAGGACCAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PQMVRTRSQLGYEPVCGFPSCPR*SGPGHS
Trigger: GCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGG...GAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGGGAGAATCATCAGTGTaGGAGCCGAAAGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGGESSV*EPKAPE
Trigger: CTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCC...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCGGAGAATCATCAGTGTaGGAGCCGAAAGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSGESSV*EPKAPE
Trigger: CTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCC...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGTGGAGCGTGGTCCCCTaGAGCCCAGTGAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GTGYADSLSLTGLRWPSVWSVVP*SPVSRL
Trigger: CAGCCGGCTCACTGGGCTCCAGGGGACCACGCTCCA...CACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGATGAAGCTGTATGGCTaGAGCGTGGTCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVMKLYG*SVVPWS
Trigger: GCTCCAGGGGACCACGCTCCAGCCATACAGCTTCAT...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp ACTGAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCAGGATGAAGCTGTATaGCTGGAGCGTGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TEDGCAFMLRQAGQQVLRQDEAV*LERGPL
Trigger: CAGGGGACCACGCTCCAGCCATACAGCTTCATCCTG...ACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp CGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGGTTGACCAGAGGGACCTaGCACAGGATGAAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: RIHPMPGLRAKRAQPQHGLTRGT*HRMKLY
Trigger: ATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAA...CCCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCCCTCCAGCCAGCTGTTaGTGTGAAGCCGAACTACGC +
Preference number: 4 (lower is better)
Translates to: DQPMSGASSSSRTRELGAPPASC*CEAELR
Trigger: GCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGG...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCCAGCAGATGTGGTCTTaGTCACCCGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLQQMWS*SPALGQ
Trigger: CTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTG...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGCTTCACGGACGGCAGGTCATaGGATGGGAACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PQMVRTRSQLGYEPVCGFTDGRS*DGNWWE
Trigger: CTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGT...GAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGACACCACCATCTGGATaGGCTGGGTCTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLTPPSG*AGSPAQ
Trigger: CTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGT...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGAACTGGTGGGAGAACTGCTCGGCCAGCGGGGAGTACAGACATACGCTGGCATACACCACCATCTGGATaGGCTGGGTCTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GTGGRTARPAGSTDIRWHTPPSG*AGSPAQ
Trigger: CTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGT...ATGCCAGCGTATGTCTGTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTACTCCTCCTCGCTGGGTaGGGCCATCAGGCAGACATA +
Preference number: 4 (lower is better)
Translates to: CLELALPPGHESWGPEYVLLLAG*GHQADI
Trigger: TATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAG...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACACTTGTCAAACAGCATaGGCAGCTGGGAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDTCQTA*AAGSAA
Trigger: CGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGT...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCTGTCATAAGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGCCTGGAAGACGGCAATaGCAGGGTCCTCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: AVISFLEVPGQLALGQDVPGRRQ*QGPRGW
Trigger: CCACCCACGAGGACCCTGTCATTGCCGTCTTCCAGG...CACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGCCCCAGTACACCAGATGAGCTGCAAGCTGGAAAACCTGCAGCAAGGCCAGGTAGCCCACATGGGCCTTaGAGGATGCGGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: CPSTPDELQAGKPAARPGSPHGP*RMRPHP
Trigger: TGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCT...ACCTGGCCTTGCTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCGACAGAAGGAGGGTCTaGGAAACGCACAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: VRSARPGVDAGENHQCGSDRRRV*ETHSPH
Trigger: ATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGTC...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp AGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGGCAGAGCTCCTCTAGGTaGTCAACCCATGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLANMRRSSGFWAAGTLRQSSSR*STHVWS
Trigger: GCTCCAGACATGGGTTGATCACCTAGAGGAGCTCTG...CCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGCAGCTTATTGCCCCTaGTCCCCGAGCTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYAAYCP*SPSSPE
Trigger: TTCTGGTGAGCTCGGGGAGCAGGGGCAATAAGCTGC...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGCATGGTCGCCCGTGTTaGTGGCAGCGTATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLHGRPC*WQRICY
Trigger: GTAGCAGATACGCTGCCAGCAACACGGGCGACCATG...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCCTGGAATCGCCGTCCTaGTCATCAGCATGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LVPQMVRTRSQLGYEPVCLESPS*SSAWSP
Trigger: GGGCGACCATGCTGATGAGCAGGACGGCGATTCCAG...GCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: PHPPNARPQGQEGSASARRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...CCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TCCCCGCTGGGAAGTAGCTCTGCGCTGGAGTTGTCCATGCTGGGGCTGGTGAGGGAACTACGCCCGACGTaGACAGGCTGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: SPLGSSSALELSMLGLVRELRPT*TGCHKL
Trigger: AAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTC...CCTCACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTCCCAGCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGGTACACCAGATGAGCTaGAAGCTGGAAAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRVHQMS*KLENLQ
Trigger: CTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTAC...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCGTACACCAGATGAGCTaGAAGCTGGAAAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRRSSCCSTVAIRRDRLCVHQMS*KLENLQ
Trigger: CTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTAC...GCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCAACTGGTGGGAGAACTaGTCGGCCAGCGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LVPQMVRTRSQLGYEPVCNWWEN*SASGEY
Trigger: GTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTT...GCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGATGAGAAGCCGGCGCTaGAGCATCCACACCACCATC +
Preference number: 4 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRMRSRR*SIHTTI
Trigger: GATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCAT...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGTACACTGAGGATGGCTaGGCGTTCATGCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGYTEDG*AFMLRQ
Trigger: CTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTA...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGGAGCCTGGCAAACATaGGGAGGTCCTCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRGAWQT*GGPQGS
Trigger: AGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCC...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGCAGCCCAGGCCCTCGTaGCCCAGATGGTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LGDQPMSGASSSSRTRELQPRPS*PRWSGP
Trigger: TGGTCCTGACCATCTGGGGCACGAGGGCCTGGGCTG...CAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGTCCACCAGCAAGATGTaGACAGGTGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLSTSKM*TGDRAS
Trigger: AGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGA...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCTGCACAGTGGGCCATaGCTCCACCAGCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: NAQPTWALKDAASPRDRSLHSGP*LHQQDV
Trigger: CACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAG...ACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGCTGCACAGTGGGCCATaGCTCCACCAGCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: VEMPTRAARTGGKRRNTELHSGP*LHQQDV
Trigger: CACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAG...CTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCTGTCATAAGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGAAGGACCGCGAGCTCTaGAGTGGCCCCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: AVISFLEVPGQLALGQDVKDREL*SGPSKL
Trigger: CAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTT...CACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp AAACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGTTCTTCAGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: KPAARPGPHLGLAAAGSSDAGCS*LLWKGY
Trigger: GTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTC...TGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCTCATCATCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: TRAGEQSIGSSPSKDFSSSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...TGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTCCCGGGTGAGGTACTaGCAGCGGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: WRYDGTGYADSLSLTGLRSRVRY*QRRSSC
Trigger: GCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGA...ACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR CCA 90 bp TTCGCAGCACCCTCCGGAAAGGCACCGCCAGCCGTGTCCTCAAGGACCGCGAGCCAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: FAAPSGKAPPAVSSRTASQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...GCTCGCGGTCCTTGAGGACACGGCTGGCGGTGCCTTTCCGGAGGGTGCTGCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGCCGTTCGATGGCCTCTaGGGGGATCAGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWPFDGL*GDQTGG
Trigger: GCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGG...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCCATGGTAGGGGCGGATaGCTTTCAGGCTCCGTTCGA +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLHGRGG*LSGSVR
Trigger: TCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATG...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LVPQMVRTRSQLGYEPVCARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...GCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAATCCACACCACCATCTaGATGAGCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAPGPVWMLGRIISVGAEIHTTI*MSWVSC
Trigger: GCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGAT...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACAGAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCGTCATCGCTGCTGGTTaGGGAGCCAAAGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TEGGSEKRTAHMGLEGCGVIAAG*GAKAEG
Trigger: GCCCTCAGCTTTGGCTCCCCAACCAGCAGCGATGAC...GCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGAAGTAGCTCTGCGCTaGAGTTGTCCATGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VEMPTRAARTGGKRRNTEEVALR*SCPCWG
Trigger: GCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTC...CTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACCATCTGGATGAGCTGGGTCTCCTGCACAGCGGGGGCCAGGGGATTCCTAAATCATCCTCTGGTTCAGTaGCGAGTCCCCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TIWMSWVSCTAGARGFLNHPLVQ*RVPAGK
Trigger: CTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATG...ATTTAGGAATCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTCAACGCACAGCCCACATaGGCCTTGAAGGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: ALTRGTWHRMKLYGWSVVNAQPT*ALKDAA
Trigger: GGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT...GACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp CTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCAGGCTCAGGGTAGCCTaGGAGGAAGAAGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: LVPQMVRTRSQLGYEPVCRLRVA*EEEAHG
Trigger: GCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCT...GCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAGAAAGCCCCCGAGGGTaGGGTCCTGCACAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTESPRG*GPAQWA
Trigger: GGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTC...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGGATGTGTGGTCGACAGAGTaGCTGAGCAGGACACACAGG +
Preference number: 4 (lower is better)
Translates to: PGKHAEVLRVLGCGYTEDVWSTE*LSRTHR
Trigger: CCTGTGTGTCCTGCTCAGCCACTCTGTCGACCACAC...ATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCTGTGCCAGGCCCTaGCCATCAACAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VAPGPVWMLGRIISVGAESCARP*PSTRAL
Trigger: CAAAGCTCTTGTTGATGGCCAGGGCCTGGCACAGCT...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACGAGCACTGGAGCCCCTaGAAGGTCTGGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDEHWSP*KVWRPC
Trigger: GCATGGTCTCCAGACCTTCCAGGGGCTCCAGTGCTC...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTAGGGAAGGATCTGTTTTaGAGATCTGGAATCGCCGTC +
Preference number: 4 (lower is better)
Translates to: WQRRSSCCSTVAIRRDRLGKDLF*RSGIAV
Trigger: GACGGCGATTCCAGATCTCCAAAACAGATCCTTCCC...TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
3UTR CAA 72 bp AAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTaGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KEGLRNAQPTWA*KDAASPRDRSP
Trigger: AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CAA 72 bp CCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCGGCTTCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PSCPRWSGPGHS*AMSLFAASVDC
Trigger: ACAGTCCACAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGTGCCAGAATAACATCTaGAAACCTGGAATCGCCGTC +
Preference number: 4 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGCQNNI*KPGIAV
Trigger: GACGGCGATTCCAGGTTTTCAGATGTTATTCTGGCA...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457916.5
CDS-3UTR TCA 90 bp GCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ALVPQMVRTRSQLGYEPVQTVYH*RVCVGL
Trigger: CAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...AACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000621703.4
CDS-3UTR TCA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGCCCCAGTACACCAGATaGGCTGCAAGCTGGAAAACC +
Preference number: 4 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLPQYTR*AASWKT
Trigger: GGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGG...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCCCCCAGTACACCAGATaGGCTGCAAGCTGGAAAACC +
Preference number: 4 (lower is better)
Translates to: DQPMSGASSSSRTRELGAPQYTR*AASWKT
Trigger: GGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGG...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGCTTCACACCACCATCTGGATaGGCTGGGTCTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PQMVRTRSQLGYEPVCGFTPPSG*AGSPAQ
Trigger: CTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGT...GAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp AGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACAGGGACAGGCTCCTCCTCGCTGGGTaGGGCCATCAGGCAGACATA +
Preference number: 4 (lower is better)
Translates to: RGPQGTSQIEGCQRDRDRLLLAG*GHQADI
Trigger: TATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAG...CCTGTCCCTGTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGCTCCTCCTCGCTGGGTaGGGCCATCAGGCAGACATA +
Preference number: 4 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWLLLAG*GHQADI
Trigger: TATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAG...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGGCTGCGGGTACACTaGGGATGGCTGCGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: AARWRYDGTGYADSLSLTGLRVH*GWLRVH
Trigger: ATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCC...CGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR TCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGACAGAAGGAGGGTCTaGGAAACGCACAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRDRRRV*ETHSPH
Trigger: ATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGTC...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCGACAGAAGGAGGGTCTaGGAAACGCACAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: EGGSEKRTAHMGLEGCGLDRRRV*ETHSPH
Trigger: ATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGTC...GAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTCAAGATGTGCACAGGTaGCAGGGCTTCTCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: ALVPQMVRTRSQLGYEPVQDVHR*QGFSSL
Trigger: TAGGCTGGAGAAGCCCTGTCACCTGTGCACATCTTG...AACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp AAGGAGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTCAAGATGTGCACAGGTaGCAGGGCTTCTCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: KEPGKHAEVLRVLGCGYTQDVHR*QGFSSL
Trigger: TAGGCTGGAGAAGCCCTGTCACCTGTGCACATCTTG...AGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACACCTTGGGCGACAGAGTaGAACTTTGTCTGGAATCGC +
Preference number: 4 (lower is better)
Translates to: ALLVLQHGGDTTGQVMQTPWATE*NFVWNR
Trigger: GCGATTCCAGACAAAGTTTCACTCTGTCGCCCAAGG...TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR TCA 90 bp ACTGAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCAACAAGAGCTTTaGCCAGAGGGACCTGGCACA +
Preference number: 4 (lower is better)
Translates to: TEDGCAFMLRQAGQQVLRHQQEL*PEGPGT
Trigger: TGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATG...ACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGTGCTGGCAGCGTATCTaGTACGCGGCTTACTTGTCT +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVCWQRI*YAAYLS
Trigger: AGACAAGTAAGCCGCGTAGCAGATACGCTGCCAGCA...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTCCATGGTCGCCCGTGTTaGTGGCAGCGTATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: ALTRGTWHRMKLYGWSVVHGRPC*WQRICY
Trigger: GTAGCAGATACGCTGCCAGCAACACGGGCGACCATG...GACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp TTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGCTGGAATCGCCGTCCTaGTCATCAGCATGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LITRTRAGEQSIGSSPSKLESPS*SSAWSP
Trigger: GGGCGACCATGCTGATGAGCAGGACGGCGATTCCAG...CTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TCTGCGTTGGCCTGCCCCAGAGCATGCTGTAGCAGTGTTGGGTGCCCAACAAATGCCTGCCCCAGAGCATaGTGTAGCAGTGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SALACPRACCSSVGCPTNACPRA*CSSVGC
Trigger: GCACCCAACACTGCTACAGCATGCTCTGGGGCAGGC...ATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGGCCAACGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp GCATCTTGGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTTGATCACCCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: ASWASCCRFFTADVVLITQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...GGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGAACTACGCCCGACGTaGACAGGCTGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: AQPTWALKDAASPRDRSPELRPT*TGCHKL
Trigger: AAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTC...AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACGGGTCATGTCATCGCTaGTGGTTGGGGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDGSCHR*WLGSQS
Trigger: GCTTTGGCTCCCCAACCAGCAGCGATGACATGACCC...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGGGTCATGTCATCGCTaGTGGTTGGGGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: INPCLELALPPGHESWGPGSCHR*WLGSQS
Trigger: GCTTTGGCTCCCCAACCAGCAGCGATGACATGACCC...AGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGGTCTTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCGGGTCATGTCATCGCTaGTGGTTGGGGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VVLITRTRAGEQSIGSSPGSCHR*WLGSQS
Trigger: GCTTTGGCTCCCCAACCAGCAGCGATGACATGACCC...GGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCACACAAGTGTTTCTaGACATTCTTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AAAGHGRGGWLSGSVRWPPHKCF*TFFRVA
Trigger: GGCCACCCTGAAGAATGTGCAGAAACACTTGTGTGG...AGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGGCTATGAGCCTGTTTaGGGCTTCTGTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PCLELALPPGHESWGPEYGYEPV*GFCGLW
Trigger: CCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCC...GTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTATCTGCCCCAGAGCATaGTGTAGCAGTGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NAQPTWALKDAASPRDRSICPRA*CSSVGC
Trigger: GCACCCAACACTGCTACAGCATGCTCTGGGGCAGAT...ACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611875.5
CDS-3UTR CCA 90 bp GCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCTCCTGGCTTCTCTaGAAGGGGTACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: ALVPQMVRTRSQLGYEPVCSWLL*KGYLNS
Trigger: GCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCA...AACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: STVAIRRDRLCRQFITDGDAGCS*LLWKGY
Trigger: GTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTC...CCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR CCA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCGACATACGCTGGCATTaGGAGACAGCATGTAGACGT +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAADIRWH*ETACRR
Trigger: ACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTC...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGATCCACACCACCATCTaGATGAGCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WRCLRVRQGLEGSVGTQRIHTTI*MSWVSC
Trigger: GCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGAT...CCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCGGAGAATCATCAGTGTaGGAGCCGAAAGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: TRTRAGEQSIGSSPSKDFGESSV*EPKAPE
Trigger: CTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCC...GAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGTCTGGAAGGGGTACCTaGACAGCAGCTTATTGCCCC +
Preference number: 4 (lower is better)
Translates to: SCPRWSGPGHSLAMSLFASGRGT*TAAYCP
Trigger: GGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGA...CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGCTTCCCCCAGTACACCAGATaGGCTGCAAGCTGGAAAACC +
Preference number: 4 (lower is better)
Translates to: PQMVRTRSQLGYEPVCGFPQYTR*AASWKT
Trigger: GGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGG...GAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTAGTCACAGCTTGGCTATaGGCCTGTTTGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CLELALPPGHESWGPEYVVTAWL*ACLRLL
Trigger: CAGAAGCCGCAAACAGGCTCATAGCCAAGCTGTGAC...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp ATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTCAGAGCTCCTCTAGGTaGTCAACCCATGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: INPCLELALPPGHESWGPQSSSR*STHVWS
Trigger: GCTCCAGACATGGGTTGATCACCTAGAGGAGCTCTG...AGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp CCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGACCTTCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PWPACTWAGCDGMGTEDLQTVYH*RVCVGP
Trigger: AGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...AAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR TCA 90 bp TCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SCPRWSGPGHSLAMSLFAQTVYH*RVCVGP
Trigger: AGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCCAGCTGTTGATGTGAAGCCGAACTACGCCCGACGTGCACAGGCTGTCATAGCAGCTTATTGCCCCTaGTCCCCGAGCTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: QPAVDVKPNYARRAQAVIAAYCP*SPSSPE
Trigger: TTCTGGTGAGCTCGGGGAGCAGGGGCAATAAGCTGC...TATGACAGCCTGTGCACGTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: QQGMVGADGFQAPFDGLWRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...CCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: SSCCSTVAIRRDRLCRQFGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTGAACTACGCCCGACGTaGACAGGCTGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: ALVPQMVRTRSQLGYEPVELRPT*TGCHKL
Trigger: AAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTC...AACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGTCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGSWASC*RFFTAD
Trigger: ATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGA...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGTCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRSWASC*RFFTAD
Trigger: ATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGA...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGAACTGGTGGGAGAACTGCTCGGCCAGCGGGGAGTACAGACATACGCTGGCATGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: GTGGRTARPAGSTDIRWHASWAS*CRFFTA
Trigger: TGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC...ATGCCAGCGTATGTCTGTACTCCCCGCTGGCCGAGCAGTTCTCCCACCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCGTACACCAGATGAGCTaGAAGCTGGAAAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: EGLRNAQPTWALKDAASPVHQMS*KLENLQ
Trigger: CTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTAC...GGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGCTCAGGGTTCTGGGCTaGGGGTACACTGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LGDQPMSGASSSSRTRELLRVLG*GYTEDG
Trigger: GCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAG...CAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACCCGCATCCACCCAATaGCAGGCCTCAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTPASTQ*QASGPR
Trigger: TCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCGGG...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGTCCACCAGCAAGATGTaGACAGGTGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLSTSKM*TGDRAS
Trigger: AGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGA...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCCAGCTGTTGATGTGAAGCCGAACTACGCCCGACGTGCACAGGCTGTCATACAGGCCCGGTGTGGATaGTGGGGAGAATCATCAGTG +
Preference number: 4 (lower is better)
Translates to: QPAVDVKPNYARRAQAVIQARCG*WGESSV
Trigger: CACTGATGATTCTCCCCAGCATCCACACCGGGCCTG...TATGACAGCCTGTGCACGTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGAAGAATCATAGTAGGTaGTTCCCTCTTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QQGMVGADGFQAPFDGLWKNHSR*FPLRGR
Trigger: CCTTCCCCGAAGAGGGAAGCACCTACTATGATTCTT...CCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAAAAGGTCTGGAGACCATaGGTCAGCTTCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: QALAINKSFDQRDLAQDEKVWRP*VSFAAP
Trigger: GGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTT...TTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp ACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCTCATCAGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: TRAGEQSIGSSPSKDFSSGRPCC*QRICYA
Trigger: CGCGTAGCAGATACGCTGCCAGCAACACGGGCGACC...TGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PRAAARWRYDGTGYADSLSCSSA*SPVLLA
Trigger: TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGA...TAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LITRTRAGEQSIGSSPSKSCSSA*SPVLLA
Trigger: TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGA...CTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTCGTGCTGCAGCACGGTaGCGATACGACGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: WRYDGTGYADSLSLTGLRRAAAR*RYDGTG
Trigger: ACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACG...ACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR CCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGACATACGCTGGCATTaGGAGACAGCATGTAGACGT +
Preference number: 4 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGDIRWH*ETACRR
Trigger: ACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTC...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGGATGGCTGCGCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATGACATACGCTGGCATTaGGAGACAGCATGTAGACGT +
Preference number: 4 (lower is better)
Translates to: EDGCAFMLRQAGQQVLRHDIRWH*ETACRR
Trigger: ACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTC...ATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGCGCAGCCATCCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCGCAGTACAGACATACGCTaGCATTGGGAGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: GRSGDHASASQHPPERHRSTDIR*HWETAC
Trigger: ACATGCTGTCTCCCAATGCCAGCGTATGTCTGTACT...GCGGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp CGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAGTACAGACATACGCTaGCATTGGGAGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: RSARPGVDAGENHQCGSRSTDIR*HWETAC
Trigger: ACATGCTGTCTCCCAATGCCAGCGTATGTCTGTACT...TCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTCCGGCAAGGAGAACTTaGCAAGAACGGACGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSCCSTVAIRRDRLCRQFPARRT*QERTAG
Trigger: ACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGG...AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACATCCACACCACCATCTaGATGAGCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDIHTTI*MSWVSC
Trigger: GCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGAT...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TGCCCCAGTACACCAGATGAGCTGCAAGCTGGAAAACCTGCAGCAAGGCCAGGTGAAGTAGCTCTGCGCTaGAGTTGTCCATGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CPSTPDELQAGKPAARPGEVALR*SCPCWG
Trigger: GCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTC...ACCTGGCCTTGCTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGCATGCTCCGACAGGCTaGCCAGCAGGTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LGDQPMSGASSSSRTRELHAPTG*PAGSPS
Trigger: TGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATG...CAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGTTGTACATAATCTCCTCCCATGCTCCGACAGGCTaGCCAGCAGGTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: NSMSSWERRVFSLYIISSHAPTG*PAGSPS
Trigger: TGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATG...GGAGGAGATTATGTACAACGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGTTCAGAGTAGTGAAGGAGCCTaGCAAACATGCGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AFMLRQAGQQVLRHPLVQSSEGA*QTCGGP
Trigger: AGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACT...CTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGAACGCACAGCCCACATaGGCCTTGAAGGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: GTGYADSLSLTGLRWPSVNAQPT*ALKDAA
Trigger: GGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT...CACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGGGAGGAAGAAGCGCATaGCAGACAGAGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTGYADSLSLTGLRWPSVGGRSA*QTEVLG
Trigger: CCCCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCC...CACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp GCTGTTGATGTGAAGCCGAACTACGCCCGACGTGCACAGGCTGTCATAAGCTTCAGGCTCAGGGTAGCCTaGGAGGAAGAAGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: AVDVKPNYARRAQAVISFRLRVA*EEEAHG
Trigger: GCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCT...GAAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTCGGCTTCACATCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp ACAGAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCTGTTTGCGGCTTCTGTaGACTGTGGTGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: TEGGSEKRTAHMGLEGCGCLRLL*TVVRTG
Trigger: CCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACA...GCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCTGTCATAAGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGGCCCGGTGTGGATGCTaGGGAGAATCATCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: AVISFLEVPGQLALGQDVARCGC*GESSVW
Trigger: CCACACTGATGATTCTCCCCAGCATCCACACCGGGC...CACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGGGGAAGGATCTGTTTTaGAGATCTGCCCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RSSCCSTVAIRRDRLCRQGKDLF*RSAPEH
Trigger: ATGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCC...CTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CCA 90 bp CAGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAAATGAAGCTGTATGGCTaGAGCGTGGTCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QALAINKSFDQRDLAQDEMKLYG*SVVPWS
Trigger: GCTCCAGGGGACCACGCTCCAGCCATACAGCTTCAT...TTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGTGCCAGAATAACATCTaGAAACCTGGAATCGCCGTC +
Preference number: 4 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVCQNNI*KPGIAV
Trigger: GACGGCGATTCCAGGTTTTCAGATGTTATTCTGGCA...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR TCA 90 bp GTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACAGCCAGCTGTTGATGTaGAGCCGAACTACGCCCGAC +
Preference number: 4 (lower is better)
Translates to: VLQHGGDTTGQVMQTVYHSQLLM*SRTTPD
Trigger: GTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCT...GTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGCAGCAGATGTGGTCTTaGTCACCCGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VAIRRDRLCRQFITDGSAQQMWS*SPALGQ
Trigger: CTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTG...CGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR TCA 90 bp TCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTTTACCAGAATCACGCTaGTGGGGCTGGTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSCCSTVAIRRDRLCRQFLPESR*WGWCCP
Trigger: GGGACAACACCAGCCCCATCAGCGTGATTCTGGTAA...AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457916.5
CDS-3UTR GCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTATGCTGGCAGCGTATCTaGTACGCGGCTTACTTGTCT +
Preference number: 4 (lower is better)
Translates to: CLELALPPGHESWGPEYVCWQRI*YAAYLS
Trigger: AGACAAGTAAGCCGCGTAGCAGATACGCTGCCAGCA...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGCATGGTCGCCCGTGTTaGTGGCAGCGTATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: STVAIRRDRLCRQFITDGHGRPC*WQRICY
Trigger: GTAGCAGATACGCTGCCAGCAACACGGGCGACCATG...CCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: VWMLGRIISVGAESPRGWRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCGAACTACGCCCGACGTaGACAGGCTGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: TRTRAGEQSIGSSPSKDFELRPT*TGCHKL
Trigger: AAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTC...GAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGGCAAGCTGGAAAACCTaGAGCAAGGCCAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: GTGYADSLSLTGLRWPSVASWKT*SKARSA
Trigger: TGCGGACCTGGCCTTGCTGCAGGTTTTCCAGCTTGC...CACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR GCA 90 bp GCTGTCATAAGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGTACACTGAGGATGGCTaGGCGTTCATGCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: AVISFLEVPGQLALGQDVYTEDG*AFMLRQ
Trigger: CTGTCGGAGCATGAACGCGCAGCCATCCTCAGTGTA...CACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCCCACACAAGTGTTTCTaGACATTCTTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DQPMSGASSSSRTRELGAPHKCF*TFFRVA
Trigger: GGCCACCCTGAAGAATGTGCAGAAACACTTGTGTGG...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GCTGTCATAAGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGGGCTATGAGCCTGTTTaGGGCTTCTGTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: AVISFLEVPGQLALGQDVGYEPV*GFCGLW
Trigger: CCACAGTCCACAGAAGCCGCAAACAGGCTCATAGCC...CACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTATCCACCAGCAAGATGTaGACAGGTGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLELALPPGHESWGPEYVSTSKM*TGDRAS
Trigger: AGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGA...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCATTTCTAGAAAACTGTaGCTTAGCCAGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QRRSSCCSTVAIRRDRLCISRKL*LSQSSS
Trigger: AGAGGAGCTCTGGCTAAGGCACAGTTTTCTAGAAAT...GCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTATCTGCCCCAGAGCATaGTGTAGCAGTGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGPHLGLAAAGSSQQMWSICPRA*CSSVGC
Trigger: GCACCCAACACTGCTACAGCATGCTCTGGGGCAGAT...AGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR GCA 90 bp CTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTAGCGAAGAATCATAGTAGGTaGTTCCCTCTTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LELALPPGHESWGPEYVAKNHSR*FPLRGR
Trigger: CCTTCCCCGAAGAGGGAAGCACCTACTATGATTCTT...CGCTACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTAAGAATCATAGTAGGTaGTTCCCTCTTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AQPTWALKDAASPRDRSPKNHSR*FPLRGR
Trigger: CCTTCCCCGAAGAGGGAAGCACCTACTATGATTCTT...AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp AGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAAGTGCTCCTGGCTTCTCTaGAAGGGGTACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: RPWPSTRALTRGTWHRMKCSWLL*KGYLNS
Trigger: GCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCA...CTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp AAACCTGCAGCAAGGCCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGTTCTTCATGCTCCTGGCTTCTCTaGAAGGGGTACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: KPAARPGPHLGLAAAGSSCSWLL*KGYLNS
Trigger: GCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCA...TGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCCTTGCTGCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGAGTACAGACATACGCTaGCATTGGGAGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVSTDIR*HWETAC
Trigger: ACATGCTGTCTCCCAATGCCAGCGTATGTCTGTACT...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAAACGCACAGCCCACATaGGCCTTGAAGGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTNAQPT*ALKDAA
Trigger: GGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAGGAGGAAGAAGCGCATaGCAGACAGAGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTGGRSA*QTEVLG
Trigger: CCCCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCC...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGGGGAAGGATCTGTTTTaGAGATCTGCCCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRGKDLF*RSAPEH
Trigger: ATGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCC...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CCA 90 bp GTGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGGAAGGATCTGTTTTaGAGATCTGCCCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: VEMPTRAARTGGKRRNTEGKDLF*RSAPEH
Trigger: ATGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCC...CTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611875.5
CDS-3UTR CCA 90 bp ACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCTCATCAGGGTCTGCGTTGGCCTaGAATCGCCGTCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TRAGEQSIGSSPSKDFSSGSALA*NRRPAH
Trigger: ATGAGCAGGACGGCGATTCCAGGCCAACGCAGACCC...TGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621703.4
3UTR CAA 72 bp CCAAGCTGTGCCAGGCCCTGGCCATCAACAAGAGCTTaGACCAGAGGGACCTGGCACAGGATGAAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: PSCARPWPSTRA*TRGTWHRMKLY
Trigger: ATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCTGGCACAGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR TCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACATCACCAGAATCACGCTaGTGGGGCTGGTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTSPESR*WGWCCP
Trigger: GGGACAACACCAGCCCCATCAGCGTGATTCTGGTGA...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp GCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGTCTGGAAGGGGTACCTaGACAGCAGCTTATTGCCCC +
Preference number: 4 (lower is better)
Translates to: AARWRYDGTGYADSLSLTSGRGT*TAAYCP
Trigger: GGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGA...CGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR TCA 90 bp GTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTCTGGAAGGGGTACCTaGACAGCAGCTTATTGCCCC +
Preference number: 4 (lower is better)
Translates to: VAIRRDRLCRQFITDGSASGRGT*TAAYCP
Trigger: GGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGA...CGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGCCTGCTGGCAGCGTATCTaGTACGCGGCTTACTTGTCT +
Preference number: 4 (lower is better)
Translates to: DGTGYADSLSLTGLRWPACWQRI*YAAYLS
Trigger: AGACAAGTAAGCCGCGTAGCAGATACGCTGCCAGCA...GGCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp CCAGGTCCGCATCTTGGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTTGCTGGCAGCGTATCTaGTACGCGGCTTACTTGTCT +
Preference number: 4 (lower is better)
Translates to: PGPHLGLAAAGSSQQMWSCWQRI*YAAYLS
Trigger: AGACAAGTAAGCCGCGTAGCAGATACGCTGCCAGCA...AGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: EVPGQLALGQDVMEWGLRRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...CCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGGTCTTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCTCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: VVLITRTRAGEQSIGSSPSWASC*RFFTAD
Trigger: ATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGA...GGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTATCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CLELALPPGHESWGPEYVSWASC*RFFTAD
Trigger: ATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGA...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGCTTCTCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: PQMVRTRSQLGYEPVCGFSWASC*RFFTAD
Trigger: ATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGA...GAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACAGGGACAGGGCATCTTGGGCTAGCTaGTGCAGGTTCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: RGPQGTSQIEGCQRDRDRASWAS*CRFFTA
Trigger: TGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC...CCTGTCCCTGTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp TCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGTACACCAGATGAGCTaGAAGCTGGAAAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SCPRWSGPGHSLAMSLFAVHQMS*KLENLQ
Trigger: CTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTAC...CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp ACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCTCATCAGGAGCCTGGCAAACATaGGGAGGTCCTCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TRAGEQSIGSSPSKDFSSGAWQT*GGPQGS
Trigger: AGAACCCTGAGGACCTCCGCATGTTTGCCAGGCTCC...TGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCATTTCTAGAAAACTGTaGCTTAGCCAGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAISRKL*LSQSSS
Trigger: AGAGGAGCTCTGGCTAAGGCACAGTTTTCTAGAAAT...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTTGCGTTGGCCCTCAGTaGAAACACCACATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGCVGPQ*KHHIKK
Trigger: CTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCA...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGTGCGTTGGCCCTCAGTaGAAACACCACATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGCVGPQ*KHHIKK
Trigger: CTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCA...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CCA 90 bp CCCAGAGCATGCTGTAGCAGTGTTGGGTGCCCAACAAATCGCACATTATCAATCGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: PRACCSSVGCPTNRTLSIDAGCS*LLWKGY
Trigger: GTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTC...GATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456528.5
ENST00000483663.5
CDS-3UTR CCA 90 bp TGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WRYDGTGYADSLSLTGLRSCSSA*SPVLLA
Trigger: TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGA...ACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000622194.4
CDS-3UTR CCA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCACACACATTTCAGACTTaGTTGCCAAAATTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPHTFQT*LPKLLP
Trigger: TGGCAACAATTTTGGCAACCAAGTCTGAAATGTGTG...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CCA 90 bp CAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGGCACACATTTCAGACTTaGTTGCCAAAATTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QGMVGADGFQAPFDGLWGHTFQT*LPKLLP
Trigger: TGGCAACAATTTTGGCAACCAAGTCTGAAATGTGTG...CCCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CCA 90 bp ACTGGGCCAGGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAAGTACAGACATACGCTaGCATTGGGAGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: TGPGKAQGSLGGRSAWQTSTDIR*HWETAC
Trigger: ACATGCTGTCTCCCAATGCCAGCGTATGTCTGTACT...TGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCCTGGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGATCCACACCACCATCTaGATGAGCTGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTGYADSLSLTGLRWPSVIHTTI*MSWVSC
Trigger: GCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGAT...CACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CCA 90 bp AGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACAGGGACAGGAGTAGTGAAGGAGCCTaGCAAACATGCGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGPQGTSQIEGCQRDRDRSSEGA*QTCGGP
Trigger: AGGACCTCCGCATGTTTGCCAGGCTCCTTCACTACT...CCTGTCCCTGTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
3UTR CAA 72 bp GCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCAGGGGAGCAGTCAATA +
Preference number: 4 (lower is better)
Translates to: ASCCRFFTADVV*ITRTRAGEQSI
Trigger: TATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACAGAGCTCCTCTAGGTaGTCAACCCATGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTQSSSR*STHVWS
Trigger: GCTCCAGACATGGGTTGATCACCTAGAGGAGCTCTG...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR TCA 90 bp TGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: WRYDGTGYADSLSLTGLRQTVYH*RVCVGP
Trigger: AGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTG...ACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTA +
Preference number: 4 (lower is better)
Translates to: DQPMSGASSSSRTRELGACSSVG*PTNRTL
Trigger: TAATGTGCGATTTGTTGGGCACCCAACACTGCTACA...GGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR GCA 90 bp TCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTTCTTGGGCTAGCTGCTaGAGGTTCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SSCCSTVAIRRDRLCRQFSWASC*RFFTAD
Trigger: ATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGA...AAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGCCACACAAGTGTTTCTaGACATTCTTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWPHKCF*TFFRVA
Trigger: GGCCACCCTGAAGAATGTGCAGAAACACTTGTGTGG...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACCAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp TCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGCAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: SCPRWSGPGHSLAMSLFAQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACATGTTTGCGGCTTCTGTaGACTGTGGTGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTCLRLL*TVVRTG
Trigger: CCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACA...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp GCATCTTGGGCTAGCTGCTGCAGGTTCTTCACAGCAGATGTGGTCTTGATCACCTGTTTGCGGCTTCTGTaGACTGTGGTGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: ASWASCCRFFTADVVLITCLRLL*TVVRTG
Trigger: CCCAGTCCTCACCACAGTCCACAGAAGCCGCAAACA...GGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp AGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGCAAACGCCCGGTGTGGATGCTaGGGAGAATCATCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLCRQFITDGSALALSANARCGC*GESSVW
Trigger: CCACACTGATGATTCTCCCCAGCATCCACACCGGGC...GTTTGCACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR TCA 90 bp CCCAGAGCATGCTGTAGCAGTGTTGGGTGCCCAACAAATCGCACATTATCAATCCAGCAGATGTGGTCTTaGTCACCCGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRACCSSVGCPTNRTLSIQQMWS*SPALGQ
Trigger: CTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTG...GATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR GCA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAGAACTACGCCCGACGTaGACAGGCTGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTELRPT*TGCHKL
Trigger: AAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTC...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CAGCACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTATTTCTAGAAAACTGTaGCTTAGCCAGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QHAAELVKQHEQLGAPRVISRKL*LSQSSS
Trigger: AGAGGAGCTCTGGCTAAGGCACAGTTTTCTAGAAAT...AACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR GCA 90 bp CCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGACCTTTGCGTTGGCCCTCAGTaGAAACACCACATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: PWPACTWAGCDGMGTEDLCVGPQ*KHHIKK
Trigger: CTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCA...AAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR GCA 90 bp CTTCTCATCACTGAGCAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTTGCGTTGGCCCTCAGTaGAAACACCACATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLITEQQQGMVGADGFQACVGPQ*KHHIKK
Trigger: CTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCA...AGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTGCTCAGTGATGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GATCTGTTTTGGAGATCTGCCCCAGAGCATGCTGTAGCAGTGTTGGGTGCCCAATGCTGGCAGCGTATCTaGTACGCGGCTTACCAGAAT +
Preference number: 4 (lower is better)
Translates to: DLFWRSAPEHAVAVLGAQCWQRI*YAAYQN
Trigger: ATTCTGGTAAGCCGCGTAGCAGATACGCTGCCAGCA...TTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGATCTCCAAAACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457916.5
CDS-3UTR CCA 90 bp AGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGCAAACTGCTCCTGGCTTCTCTaGAAGGGGTACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: RLCRQFITDGSALALSANCSWLL*KGYLNS
Trigger: GCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCA...GTTTGCACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483663.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGCACACATTTCAGACTTaGTTGCCAAAATTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VWMLGRIISVGAESPRGWHTFQT*LPKLLP
Trigger: TGGCAACAATTTTGGCAACCAAGTCTGAAATGTGTG...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CCA 90 bp CGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGCCAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: RRDRLCRQFITDGSALACQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...GCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CCA 90 bp CAGCCAGCTGTTGATGTGAAGCCGAACTACGCCCGACGTGCACAGGCTGTCATACAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: QPAVDVKPNYARRAQAVIQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...TATGACAGCCTGTGCACGTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CCA 90 bp CCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTACAGGATGTGATGGAATaGGGACTGAGGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: PRAAARWRYDGTGYADSLQDVME*GLRTFI
Trigger: AATGAAGGTCCTCAGTCCCCATTCCATCACATCCTG...TAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
3UTR CAA 72 bp CTGCGTTGGCCTGCCCCAGAGCATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCACATTATCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: LRWPAPEHAVAV*GAQQIAHYQSS
Trigger: TGAAGATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGGCCAACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp GACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGCCTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTA +
Preference number: 4 (lower is better)
Translates to: DGTGYADSLSLTGLRWPACSSVG*PTNRTL
Trigger: TAATGTGCGATTTGTTGGGCACCCAACACTGCTACA...GGCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp CGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: RWRYDGTGYADSLSLTGLRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...CAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACCGACGGGACAGGTTATaGAGACAGTTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: VLQHGGDTTGQVMQTVYHRRDRL*RQFITD
Trigger: GTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG...GTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR GCA 90 bp AGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGAAGAATCATAGTAGGTaGTTCCCTCTTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: STVAIRRDRLCRQFITDGKNHSR*FPLRGR
Trigger: CCTTCCCCGAAGAGGGAAGCACCTACTATGATTCTT...CCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000622194.4
CDS-3UTR CCA 90 bp GTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTCTGTTTTGGAGATCTaGAATCGCCGTCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VAIRRDRLCRQFITDGSASVLEI*NRRPAH
Trigger: ATGAGCAGGACGGCGATTCCAGATCTCCAAAACAGA...CGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR GCA 90 bp GTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTA +
Preference number: 4 (lower is better)
Translates to: VAIRRDRLCRQFITDGSACSSVG*PTNRTL
Trigger: TAATGTGCGATTTGTTGGGCACCCAACACTGCTACA...CGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CCA 90 bp CCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGGGACTGAGGACCTTCACACATTTCAGACTTaGTTGCCAAAATTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PWPACTWAGCDGMGTEDLHTFQT*LPKLLP
Trigger: TGGCAACAATTTTGGCAACCAAGTCTGAAATGTGTG...AAGGTCCTCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CCA 90 bp TCTGCGTTGGCCCTCAGTGCAAACACCACATTAAAAAGAATCATAGTAGGTGCTGCCAGGTCCGCATCTTaGGCTAGCTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SALALSANTTLKRIIVGAARSAS*ASCCRF
Trigger: GAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGC...AGCACCTACTATGATTCTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR TCA 90 bp CCTCAGTGCAAACACCACATTAAAAAGAATCATAGTAGGTGCTTCCCTCTTCGGCAGCAGATGTGGTCTTaGTCACCCGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PQCKHHIKKNHSRCFPLRQQMWS*SPALGQ
Trigger: CTGCCCTAGTGCGGGTGATCAAGACCACATCTGCTG...CCGAAGAGGGAAGCACCTACTATGATTCTTTTTAATGTGGTGTTTGCACTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CCA 90 bp GCTGTTGATGTGAAGCCGAACTACGCCCGACGTGCACAGGCTGTCATAAGCTTCCACACATTTCAGACTTaGTTGCCAAAATTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: AVDVKPNYARRAQAVISFHTFQT*LPKLLP
Trigger: TGGCAACAATTTTGGCAACCAAGTCTGAAATGTGTG...GAAGCTTATGACAGCCTGTGCACGTCGGGCGTAGTTCGGCTTCACATCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR GCA 90 bp CAAATCGCACATTATCAATCTTCAGTTCAAATTTTTGGCCACACATTTCAGACTCAGCGGCGCTCCTCGTaGTGCAGCACGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: QIAHYQSSVQIFGHTFQTQRRSS*CSTVAI
Trigger: TATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTG...AGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAGATTGATAATGTGCGATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CCA 90 bp CAAATCGCACATTATCAATCTTCAGTTCAAATTTTTGGCCACACATTTCAGACTGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: QIAHYQSSVQIFGHTFQTGRPCC*QRICYA
Trigger: CGCGTAGCAGATACGCTGCCAGCAACACGGGCGACC...AGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAGATTGATAATGTGCGATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR TCA 90 bp GCATGCTGTAGCAGTGTTGGGTGCCCAACAAATCGCACATTATCAATCTTCAGTTGCCAGAATAACATCTaGAAACCTTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ACCSSVGCPTNRTLSIFSCQNNI*KPWWWM
Trigger: CATCCACCACCAAGGTTTTCAGATGTTATTCTGGCA...ACTGAAGATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp ATCGCACATTATCAATCTTCAGTTCAAATTTTTGGCCACACATTTCAGACTTGGGGTCCCTGGCCAGCTTaGACTTGGGCAGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: IAHYQSSVQIFGHTFQTWGPWPA*TWAGCD
Trigger: ATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACC...CCAAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAGATTGATAATGTGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR GCA 90 bp CCTCAGTGCAAACACCACATTAAAAAGAATCATAGTAGGTGCTTCCCTCTTCGGTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTA +
Preference number: 4 (lower is better)
Translates to: PQCKHHIKKNHSRCFPLRCSSVG*PTNRTL
Trigger: TAATGTGCGATTTGTTGGGCACCCAACACTGCTACA...CCGAAGAGGGAAGCACCTACTATGATTCTTTTTAATGTGGTGTTTGCACTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp CTTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTCTGATGGGGCTGGTGTaGTCCCGCATCCCGCCGTGG +
Preference number: 5 (lower is better)
Translates to: LGLPGEVLAAALLVLQHGLMGLV*SRIPPW
Trigger: CCACGGCGGGATGCGGGACAACACCAGCCCCATCAG...ACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp AGTGAGCCGGCTGTAGTGGCAGCAGCCCGGGTGGGCGTCGGCCATGCAGGGGAGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: SEPAVVAAARVGVGHAGEPKLRA*GVLRLR
Trigger: TCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGG...CTCCCCTGCATGGCCGACGCCCACCCGGGCTGCTGCCACTACAGCCGGCTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CAA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGCTGATGGGGCTGGTGTaGTCCCGCATCCCGCCGTGG +
Preference number: 5 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGLMGLV*SRIPPW
Trigger: CCACGGCGGGATGCGGGACAACACCAGCCCCATCAG...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CTTGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTTGCTACGCGGCTTACTaGTCTGGGACGCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: LGLPGEVLAAALLVLQHGCYAAY*SGTPGA
Trigger: AGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCA...ACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CGCATCCACCCAATGCCAGGCCTCAGGGCCAAGAGGGCTCAGCCTCAGCACGGGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: RIHPMPGLRAKRAQPQHGPKLRA*GVLRLR
Trigger: TCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGG...CCCGTGCTGAGGCTGAGCCCTCTTGGCCCTGAGGCCTGGCATTGGGTGGATGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS GCA 90 bp TCCAGGCTAAGCTTCGGACTCCCAGGTGGCTGGGAGGGCCAGGGGTaGACAGGTGCATCAGAGCAGGTGCTGCCTTGCTGGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SRLSFGLPGGWEGQG*TGASEQVLPCWRAR
Trigger: CCTGGCCCTCCAGCAAGGCAGCACCTGCTCTGATGCACCTGTGCACCCCTGGCCCTCCCAGCCACCTGGGAGTCCGAAGCTTAGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS TCA 90 bp CGCCGCATTTGCTGGCTTTGTCCACTAGTGCTCGCCCCTGGCTGCTaGTGCGGAGCCTCACGTGGCCGCAGCCCAAGAGTAGGGACTGGC +
Preference number: 5 (lower is better)
Translates to: RRICWLCPLVLAPGC*CGASRGRSPRVGTG
Trigger: GCCAGTCCCTACTCTTGGGCTGCGGCCACGTGAGGCTCCGCATCAGCAGCCAGGGGCGAGCACTAGTGGACAAAGCCAGCAAATGCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp AGGGCCCTGCCAGCCTCACCCCTTCCCACTCGGGGCTCCAGGCTCTaGCAGCCAGCAGCACTCACAGACATACGCTGGCATTGGGAGACA +
Preference number: 5 (lower is better)
Translates to: RALPASPLPTRGSRL*QPAALTDIRWHWET
Trigger: TGTCTCCCAATGCCAGCGTATGTCTGTGAGTGCTGCTGGCTGCCAGAGCCTGGAGCCCCGAGTGGGAAGGGGTGAGGCTGGCAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464069.1
CDS CCA 90 bp GGCTTCCACAGCCTTTGGTGCCTGGCCAACACAGAGAACAGCATCTaGAGGGCCCTGCCAGCCTCACCCCTTCCCACTCGGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GFHSLWCLANTENSI*RALPASPLPTRGSR
Trigger: CCTGGAGCCCCGAGTGGGAAGGGGTGAGGCTGGCAGGGCCCTCCAGATGCTGTTCTCTGTGTTGGCCAGGCACCAAAGGCTGTGGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464069.1
CDS CCA 90 bp TGCAGCTGGATGAGAAGCCGGCGCTGCAGCATCCACACCACCATCTaGATGAGCTGGGTCTGCGGGTGGCAGCAGGTGAGGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: CSWMRSRRCSIHTTI*MSWVCGWQQVRLVP
Trigger: GGGGACCAGCCTCACCTGCTGCCACCCGCAGACCCAGCTCATCCAGATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCATCCAGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp AGGGACTGGCTTGGCCACCTCCAGGCTAAGCTTCGGACTCCCAGGTaGCTGGGAGGGCCAGGGGTGCACAGGTGCATCAGAGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: RDWLGHLQAKLRTPR*LGGPGVHRCIRAGA
Trigger: AGCACCTGCTCTGATGCACCTGTGCACCCCTGGCCCTCCCAGCCACCTGGGAGTCCGAAGCTTAGCCTGGAGGTGGCCAAGCCAGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp CTGCTGATGCGGAGCCTCACGTGGCCGCAGCCCAAGAGTAGGGACTaGCTTGGCCACCTCCAGGCTAAGCTTCGGACTCCCAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLMRSLTWPQPKSRD*LGHLQAKLRTPRWL
Trigger: CAGCCACCTGGGAGTCCGAAGCTTAGCCTGGAGGTGGCCAAGCCAGTCCCTACTCTTGGGCTGCGGCCACGTGAGGCTCCGCATCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: QPTWALKDAASPRDRSPGSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGAACCACCACAGGGGACGGGGCTaGCGTCTTGCTGCGAGCACT +
Preference number: 5 (lower is better)
Translates to: GLEGSVGTQRAAAPQRNHHRGRG*RLAAST
Trigger: AGTGCTCGCAGCAAGACGCAAGCCCCGTCCCCTGTG...GTGGTTCCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS TCA 90 bp CCTGGGACCTGGCAACAGGCTGCTGCCCTCAAGCCACACTGGCCATaGCGGCTCTTCTGGGGCGCAGAGGTGTCAGCTGTCCTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: PGTWQQAAALKPHWP*RLFWGAEVSAVLVV
Trigger: CACTACCAGGACAGCTGACACCTCTGCGCCCCAGAAGAGCCGTCATGGCCAGTGTGGCTTGAGGGCAGCAGCCTGTTGCCAGGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 90 bp GGAGAGGTGTCTCCACGGGGGACACGAGGCACGTGCATGTGCGTGTaGAGCTGTGTGGAGGCCCCTCATCACTCACAGCACCACCCACGT +
Preference number: 5 (lower is better)
Translates to: GEVSPRGTRGTCMCV*SCVEAPHHSQHHPR
Trigger: ACGTGGGTGGTGCTGTGAGTGATGAGGGGCCTCCACACAGCTGCACACGCACATGCACGTGCCTCGTGTCCCCCGTGGAGACACCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp CTCCACGGGGGACACGAGGCACGTGCATGTGCGTGTGCAGCTGTGTaGAGGCCCCTCATCACTCACAGCACCACCCACGTTGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LHGGHEARACACAAV*RPLITHSTTHVEPP
Trigger: AGGAGGCTCAACGTGGGTGGTGCTGTGAGTGATGAGGGGCCTCCACACAGCTGCACACGCACATGCACGTGCCTCGTGTCCCCCGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp AGCATCCACACCACCATCTGGATGAGCTGGGTCTCCTGCACAGCGGGGGCCAGGTGCTACGCGGCTTACTaGTCTGGGACGCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: SIHTTIWMSWVSCTAGARCYAAY*SGTPGA
Trigger: AGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCA...CCTGGCCCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: GVDAGENHQCGSRKPPRVSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...CACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RSSCCSTVAIRRDRLCRQSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...CTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGGACCGGCAAGGAGAACTaGGCAAGAACGGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: RQGLEGSVGTQRAAAPQRTGKEN*ARTDGR
Trigger: CCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGT...CCGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp ATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCGAGCTCTGCGCTGGAGTaGTCCATGCTGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ISHGGHLILERQDQLGLPSSALE*SMLGLV
Trigger: CACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCT...CGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp AGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCG +
Preference number: 5 (lower is better)
Translates to: RYWQRRSSCCSTVAIRRDGPGHS*AMSLFA
Trigger: CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCC...GTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTCACAGGGGACGGGGCTaGCGTCTTGCTGCGAGCACT +
Preference number: 5 (lower is better)
Translates to: AQPTWALKDAASPRDRSPHRGRG*RLAAST
Trigger: AGTGCTCGCAGCAAGACGCAAGCCCCGTCCCCTGTG...AGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CAA 90 bp CAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTCCTGGCACTGACGGGTCTGCGTaGGCCTGGAATCGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: QPTWALKDAASPRDRSPGTDGSA*AWNRRP
Trigger: AGGACGGCGATTCCAGGCCAACGCAGACCCGTCAGT...GCCAGGACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS TCA 90 bp CAGGGAGCCATGGCCCTAGACATGGCCACAGCACGCTCCCTGTGCTaGCGCACAGGCAGAAAGGCCCTCTTCTCAGAAAGGGAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: QGAMALDMATARSLC*RTGRKALFSEREPP
Trigger: TGGGGGCTCCCTTTCTGAGAAGAGGGCCTTTCTGCCTGTGCGTCAGCACAGGGAGCGTGCTGTGGCCATGTCTAGGGCCATGGCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 90 bp GAGACAGGAGAGGTGTCTCCACGGGGGACACGAGGCACGTGCATGTaGGTGTGCAGCTGTGTGGAGGCCCCTCATCACTCACAGCACCAC +
Preference number: 5 (lower is better)
Translates to: ETGEVSPRGTRGTCM*VCSCVEAPHHSQHH
Trigger: GTGGTGCTGTGAGTGATGAGGGGCCTCCACACAGCTGCACACGCACATGCACGTGCCTCGTGTCCCCCGTGGAGACACCTCTCCTGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp ACAGGAACGCCGCATTTGCTGGCTTTGTCCACTAGTGCTCGCCCCTaGCTGCTGATGCGGAGCCTCACGTGGCCGCAGCCCAAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: TGTPHLLALSTSARP*LLMRSLTWPQPKSR
Trigger: CCTACTCTTGGGCTGCGGCCACGTGAGGCTCCGCATCAGCAGCCAGGGGCGAGCACTAGTGGACAAAGCCAGCAAATGCGGCGTTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGCTGAACAGCAGCTTATaGCCCCTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLLNSSL*PLLPEL
Trigger: GAGCTCGGGGAGCAGGGGCAATAAGCTGCTGTTCAG...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CCATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTTGGCCTCCCTGAACAGCAGCTTATaGCCCCTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PSAMADTSSWSARISLASLNSSL*PLLPEL
Trigger: GAGCTCGGGGAGCAGGGGCAATAAGCTGCTGTTCAG...GGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456528.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAATGCTACGCGGCTTACTaGTCTGGGACGCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: VAPGPVWMLGRIISVGAECYAAY*SGTPGA
Trigger: AGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCA...TTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCGCATGGTCGCCCGTGTaGCTGGCAGCGTATCTGCTA +
Preference number: 5 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAAAWSPV*LAAYLL
Trigger: TAGCAGATACGCTGCCAGCAACACGGGCGACCATGC...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp ACGCTGCGGAACTTGTCAAACAGCATGAGCAGCTGGGAGCGCCGCGTGTTCTCGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: TLRNLSNSMSSWERRVFSPKLRA*GVLRLR
Trigger: TCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGG...CGAGAACACGCGGCGCTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GCGTTCATGCTCCGACAGGCTGGCCAGCAGGTTCTCCGTCATCCTCTGGTTCAGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: AFMLRQAGQQVLRHPLVQPKLRA*GVLRLR
Trigger: TCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGG...CTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGAGCATGAACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCTTCTCCAGCCAGCTCTGCGCTGGAGTaGTCCATGCTGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VGHASTSKMCTGDRASPASSALE*SMLGLV
Trigger: CACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCT...GGCTGGAGAAGCCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GCCGTGTCCTCAAGGACCGCGAGCTCTGCAGTGGCCCCTCCAAGCTGTGCCAGGGGGGAAGGATCTGTTTaGGAGATCTGCCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: AVSSRTASSAVAPPSCARGEGSV*EICPRA
Trigger: TGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCCC...CCTGGCACAGCTTGGAGGGGCCACTGCAGAGCTCGCGGTCCTTGAGGACACGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611875.5
CDS TCA 90 bp GAGGGTCATGTCATCGCTGCTGGCTGTGGGGGACATGGGTCAGGGTaGCCAAGTGGAATTCCAGGACACCCAGGGGAACAGCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: EGHVIAAGCGGHGSG*PSGIPGHPGEQRGQ
Trigger: CTGCCCTCGCTGTTCCCCTGGGTGTCCTGGAATTCCACTTGGTCACCCTGACCCATGTCCCCCACAGCCAGCAGCGATGACATGACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp CAAACACCCCAAGGTGGGCCTGGGCATCCTGTCCCTCACCCAGGATaGAGGACAAAGCACCCTGGGCAGGTGGGGTCCTCACATGAAGCA +
Preference number: 5 (lower is better)
Translates to: QTPQGGPGHPVPHPG*RTKHPGQVGSSHEA
Trigger: TGCTTCATGTGAGGACCCCACCTGCCCAGGGTGCTTTGTCCTCCATCCTGGGTGAGGGACAGGATGCCCAGGCCCACCTTGGGGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp GAACAGAGGTGCGATGTGTGCCCCACAAACACCCCAAGGTGGGCCTaGGCATCCTGTCCCTCACCCAGGATGGAGGACAAAGCACCCTGG +
Preference number: 5 (lower is better)
Translates to: EQRCDVCPTNTPRWA*ASCPSPRMEDKAPW
Trigger: CCAGGGTGCTTTGTCCTCCATCCTGGGTGAGGGACAGGATGCCCAGGCCCACCTTGGGGTGTTTGTGGGGCACACATCGCACCTCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp AGCTTCCTTGAGGTCCCTGGCCAGCTTGCACTTGGGCAGGATGTGATGGAATGGCTGATGGGGCTGGTGTaGTCCCGCATCCCGCCGTGG +
Preference number: 5 (lower is better)
Translates to: SFLEVPGQLALGQDVMEWLMGLV*SRIPPW
Trigger: CCACGGCGGGATGCGGGACAACACCAGCCCCATCAG...CCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGCTGAACAGCAGCTTATaGCCCCTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: ENHQCGSRKPPRVGSCTVLNSSL*PLLPEL
Trigger: GAGCTCGGGGAGCAGGGGCAATAAGCTGCTGTTCAG...CACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTCTGAACAGCAGCTTATaGCCCCTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGLNSSL*PLLPEL
Trigger: GAGCTCGGGGAGCAGGGGCAATAAGCTGCTGTTCAG...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGGTGCTACGCGGCTTACTaGTCTGGGACGCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: ERLRVAWEEEAHGRQRCWCYAAY*SGTPGA
Trigger: AGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCA...CCAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GGGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCATGGTCGCCCGTGTaGCTGGCAGCGTATCTGCTA +
Preference number: 5 (lower is better)
Translates to: GSCTVGHASTSKMCTGDRAWSPV*LAAYLL
Trigger: TAGCAGATACGCTGCCAGCAACACGGGCGACCATGC...CCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp AGGCCCTCGTGCCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGGCATGGTCGCCCGTGTaGCTGGCAGCGTATCTGCTA +
Preference number: 5 (lower is better)
Translates to: RPSCPRWSGPGHSLAMSLAWSPV*LAAYLL
Trigger: TAGCAGATACGCTGCCAGCAACACGGGCGACCATGC...CAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGGCACGAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGCCACACATTTCAGACTaGGTTGCCAAAATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: ASRVRYWQRRSSCCSTVAPHISD*VAKIVA
Trigger: GGCAACAATTTTGGCAACCAAGTCTGAAATGTGTGG...CGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp CGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCA +
Preference number: 5 (lower is better)
Translates to: RVRYWQRRSSCCSTVAIRHAVAV*GAQQIA
Trigger: TGCGATTTGTTGGGCACCCAACACTGCTACAGCATG...TCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp CCCCAGATGGTCAGGACCAGGTCACAGCTTGGCTATGAGCCTGTTTGCGGCTTCAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: PQMVRTRSQLGYEPVCGFSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...GAAGCCGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCCTGACCATCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCA +
Preference number: 5 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGTADVV*ITRTRA
Trigger: TGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGT...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGACCGGCAAGGAGAACTaGGCAAGAACGGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: VWMLGRIISVGAESPRGWTGKEN*ARTDGR
Trigger: CCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGT...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp AGCCTGGCAAACATGCGGAGGTCCTCAGGGTTCTGGGCTGCGGGTACACTGAGGACCGGCAAGGAGAACTaGGCAAGAACGGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: SLANMRRSSGFWAAGTLRTGKEN*ARTDGR
Trigger: CCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGT...CCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GGAAAGGCTCAGGGTAGCCTGGGAGGAAGAAGCGCATGGCAGACAGAGGTGCTGAGCTCTGCGCTGGAGTaGTCCATGCTGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GKAQGSLGGRSAWQTEVLSSALE*SMLGLV
Trigger: CACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCT...CAGCACCTCTGTCTGCCATGCGCTTCTTCCTCCCAGGCTACCCTGAGCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCACAGCGCGCCGCGTGTTCTCGTaGTACATAATCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AARTGGKRRNTEGSSPTARRVFS*YIISSR
Trigger: CCTGGAGGAGATTATGTACAACGAGAACACGCGGCG...CGCTGTGGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp TCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGTCCTGCACAGTGGGCCACGCCGCGTGTTCTCGTaGTACATAATCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSVWEPKAPEGGVLHSGPRRVFS*YIISSR
Trigger: CCTGGAGGAGATTATGTACAACGAGAACACGCGGCG...TGGCCCACTGTGCAGGACCCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGGGGGGGGAAGGATCTGTTTaGGAGATCTGCCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: AGHGRGGWLSGSVRWPLGGEGSV*EICPRA
Trigger: TGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCCC...CCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS TCA 90 bp CGGCTCTTCTGGGGCGCAGAGGTGTCAGCTGTCCTGGTAGTGGTATaGGATCCTGCTCTGCTCCCAGGCTGGGGCAGAGATTCCAGCACT +
Preference number: 5 (lower is better)
Translates to: RLFWGAEVSAVLVVV*DPALLPGWGRDSST
Trigger: AGTGCTGGAATCTCTGCCCCAGCCTGGGAGCAGAGCAGGATCTCATACCACTACCAGGACAGCTGACACCTCTGCGCCCCAGAAGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp CTGCTCCCAGGCTGGGGCAGAGATTCCAGCACTGATTTGCTGGGCTaGGAGCTGCCCCTAATTCTAGCAAGCCTGCTGAAGAGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: LLPGWGRDSSTDLLG*ELPLILASLLKSPE
Trigger: CTCCGGGCTCTTCAGCAGGCTTGCTAGAATTAGGGGCAGCTCCCAGCCCAGCAAATCAGTGCTGGAATCTCTGCCCCAGCCTGGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp GGACCTGAACAGAGGTGCGATGTGTGCCCCACAAACACCCCAAGGTaGGCCTGGGCATCCTGTCCCTCACCCAGGATGGAGGACAAAGCA +
Preference number: 5 (lower is better)
Translates to: GPEQRCDVCPTNTPR*AWASCPSPRMEDKA
Trigger: TGCTTTGTCCTCCATCCTGGGTGAGGGACAGGATGCCCAGGCCCACCTTGGGGTGTTTGTGGGGCACACATCGCACCTCTGTTCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp GCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTGTATGGCTGGAGCGTGGTCTGCTACGCGGCTTACTaGTCTGGGACGCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: ALTRGTWHRMKLYGWSVVCYAAY*SGTPGA
Trigger: AGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCA...GACCACGCTCCAGCCATACAGCTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CAA 90 bp TGGCAGCGGCGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTACATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCA +
Preference number: 5 (lower is better)
Translates to: WQRRSSCCSTVAIRRDRLHAVAV*GAQQIA
Trigger: TGCGATTTGTTGGGCACCCAACACTGCTACAGCATG...TAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp TCTGCGTTGGCCTGCCCCAGAGCATGCTGTAGCAGTGTTGGGTGCCCAACAAATAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SALACPRACCSSVGCPTNSARIS*ASRVRY
Trigger: GTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCT...ATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGGCCAACGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CAA 90 bp GCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCTGACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCA +
Preference number: 5 (lower is better)
Translates to: AAGHGRGGWLSGSVRWPLTADVV*ITRTRA
Trigger: TGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGT...CAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp ATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTAGCTCTGCGCTGGAGTaGTCCATGCTGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: INPCLELALPPGHESWGPSSALE*SMLGLV
Trigger: CACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCT...AGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCG +
Preference number: 5 (lower is better)
Translates to: VWMLGRIISVGAESPRGWGPGHS*AMSLFA
Trigger: CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCC...CCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp TGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTGGGGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCG +
Preference number: 5 (lower is better)
Translates to: CGCWGESSVWEPKAPEGGGPGHS*AMSLFA
Trigger: CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCC...CCCACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS GCA 90 bp CGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATaGAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGGAATCGC +
Preference number: 5 (lower is better)
Translates to: RSSCCSTVAIRRDRL*RQFITDGSALAWNR
Trigger: GCGATTCCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS CCA 90 bp GCGTATCTGCTACGCGGCTTACTTGTCTGGGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTACCTGAACAGCAGCTTATTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: AYLLRGLLVWDAGCS*LLWKGYLNSSLLPL
Trigger: CAGGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCAGATACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399953.7
ENST00000419636.1
ENST00000456528.5
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS CCA 90 bp GTTGGAGGACATGGCTCGCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGCGGCTTACTT +
Preference number: 5 (lower is better)
Translates to: VGGHGSLESPSCSSA*SPVLLAAYLLRGLL
Trigger: AAGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGCGAGCCATGTCCTCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419636.1
CDS CCA 90 bp CGGGGCTCCAGGCTCTGGCAGCCAGCAGCACTCACAGACATACGCTaGCATTGGGAGACAGCATGTAGACGTTGTTCTCACACAGCGGGT +
Preference number: 5 (lower is better)
Translates to: RGSRLWQPAALTDIR*HWETACRRCSHTAG
Trigger: ACCCGCTGTGTGAGAACAACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTCTGTGAGTGCTGCTGGCTGCCAGAGCCTGGAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464069.1
CDS CCA 90 bp ATCCTGTCCCTCACCCAGGATGGAGGACAAAGCACCCTGGGCAGGTaGGGTCCTCACATGAAGCATGAAGCCTACAGCCAGACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ILSLTQDGGQSTLGR*GPHMKHEAYSQTSA
Trigger: GGCTGAGGTCTGGCTGTAGGCTTCATGCTTCATGTGAGGACCCCACCTGCCCAGGGTGCTTTGTCCTCCATCCTGGGTGAGGGACAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACTGATGGGGCTGGTGTaGTCCCGCATCCCGCCGTGG +
Preference number: 5 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTLMGLV*SRIPPW
Trigger: CCACGGCGGGATGCGGGACAACACCAGCCCCATCAG...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp ACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGGACTTCTCATCACTGATGGGGCTGGTGTaGTCCCGCATCCCGCCGTGG +
Preference number: 5 (lower is better)
Translates to: TRAGEQSIGSSPSKDFSSLMGLV*SRIPPW
Trigger: CCACGGCGGGATGCGGGACAACACCAGCCCCATCAG...TGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422814.5
ENST00000457916.5
ENST00000483663.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CAGCAGCAGGGCATGGTAGGGGCGGATGGCTTTCAGGCTCCGTTCGATGGCCTCCATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCA +
Preference number: 5 (lower is better)
Translates to: QQQGMVGADGFQAPFDGLHAVAV*GAQQIA
Trigger: TGCGATTTGTTGGGCACCCAACACTGCTACAGCATG...GAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACCATGCCCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp GCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGACTGACGGGTCTGCGTaGGCCTGCCCCAGAGCATGC +
Preference number: 5 (lower is better)
Translates to: AARWRYDGTGYADSLSLTTDGSA*ACPRAC
Trigger: GCATGCTCTGGGGCAGGCCAACGCAGACCCGTCAGT...CGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CAA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCA +
Preference number: 5 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGTADVV*ITRTRA
Trigger: TGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGT...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp GGTCCTGCACAGTGGGCCATGCCTCCACCAGCAAGATGTGCACAGGTGACAGGGCGCCGCGTGTTCTCGTaGTACATAATCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GPAQWAMPPPARCAQVTGRRVFS*YIISSR
Trigger: CCTGGAGGAGATTATGTACAACGAGAACACGCGGCG...CCCTGTCACCTGTGCACATCTTGCTGGTGGAGGCATGGCCCACTGTGCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp AACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCTCACCCAGAGACAGGAGTGGACCAGGTCACAGCTaGGCTATGAGCCTGTTTGCG +
Preference number: 5 (lower is better)
Translates to: NAQPTWALKDAASPRDRSGPGHS*AMSLFA
Trigger: CGCAAACAGGCTCATAGCCAAGCTGTGACCTGGTCC...ACTCCTGTCTCTGGGTGAGGCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp CTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGCACCCTCCGGAAAGGCACCCCATCAACAAGAGCTTaGACCAGAGGGACCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LEGLETMRQLRSTLRKGTPSTRA*TRGTWH
Trigger: GTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGG...GGTGCCTTTCCGGAGGGTGCTGCGAAGCTGACGCATGGTCTCCAGACCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS GCA 90 bp CGCTCCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATaGAGACAGTTTATCACTGACGGGTCTGCGTTGGCCAGAATCACG +
Preference number: 5 (lower is better)
Translates to: RSSCCSTVAIRRDRL*RQFITDGSALARIT
Trigger: CGTGATTCTGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS-3UTR CAA 90 bp GTACGTAGCGCCAGGCCCGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCA +
Preference number: 5 (lower is better)
Translates to: VRSARPGVDAGENHQCGSHAVAV*GAQQIA
Trigger: TGCGATTTGTTGGGCACCCAACACTGCTACAGCATG...GCTCCCACACTGATGATTCTCCCCAGCATCCACACCGGGCCTGGCGCTACGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACAACTGACGGGTCTGCGTaGGCCTGCCCCAGAGCATGC +
Preference number: 5 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTTDGSA*ACPRAC
Trigger: GCATGCTCTGGGGCAGGCCAACGCAGACCCGTCAGT...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399953.7
CDS TCA 90 bp ATGAGATCCTGCTCTGCTCCCAGGCTGGGGCAGAGATTCCAGCACTaGTTTGCTGGGCTGGGAGCTGCCCCTAATTCTAGCAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: MRSCSAPRLGQRFQH*FAGLGAAPNSSKPA
Trigger: AGCAGGCTTGCTAGAATTAGGGGCAGCTCCCAGCCCAGCAAATCAGTGCTGGAATCTCTGCCCCAGCCTGGGAGCAGAGCAGGATCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 90 bp GACAGAGTGAAACTTTGTCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGCGGCTTACCC +
Preference number: 5 (lower is better)
Translates to: DRVKLCLESPSCSSA*SPVLLAAYLLRGLP
Trigger: GGGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGACAAAGTTTCACTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468260.5
CDS-3UTR CAA 90 bp TCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCGCATGGTCGCCCGTGTaGCTGGCAGCGTATCTGCTA +
Preference number: 5 (lower is better)
Translates to: SCCSTVAIRRDRLCRQFIAWSPV*LAAYLL
Trigger: TAGCAGATACGCTGCCAGCAACACGGGCGACCATGC...GATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000622194.4
CDS-3UTR CAA 90 bp ACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCCCCACACATTTCAGACTaGGTTGCCAAAATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: TRAARTGGKRRNTEGSSPPHISD*VAKIVA
Trigger: GGCAACAATTTTGGCAACCAAGTCTGAAATGTGTGG...GGGGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp ACAGAAGGAGGGTCTGAGAAACGCACAGCCCACATGGGCCTTGAAGGATGCGGCCCATCAACAAGAGCTTaGACCAGAGGGACCTGGCAC +
Preference number: 5 (lower is better)
Translates to: TEGGSEKRTAHMGLEGCGPSTRA*TRGTWH
Trigger: GTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGG...GCCGCATCCTTCAAGGCCCATGTGGGCTGTGCGTTTCTCAGACCCTCCTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CAA 90 bp AGAGCTCCTCTAGGTGATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACTGAACAGCAGCTTATaGCCCCTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RAPLGDQPMSGASSSSRTLNSSL*PLLPEL
Trigger: GAGCTCGGGGAGCAGGGGCAATAAGCTGCTGTTCAG...TGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399953.7
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS-3UTR CAA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTACATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCA +
Preference number: 5 (lower is better)
Translates to: CLELALPPGHESWGPEYVHAVAV*GAQQIA
Trigger: TGCGATTTGTTGGGCACCCAACACTGCTACAGCATG...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp AGGCCCTGGCCATCAACAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAAGACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCA +
Preference number: 5 (lower is better)
Translates to: RPWPSTRALTRGTWHRMKTADVV*ITRTRA
Trigger: TGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGT...CTTCATCCTGTGCCAGGTCCCTCTGGTCAAAGCTCTTGTTGATGGCCAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611875.5
ENST00000622194.4
CDS-3UTR CAA 90 bp TGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTACCGGCAAGGAGAACTaGGCAAGAACGGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: WRYDGTGYADSLSLTGLRTGKEN*ARTDGR
Trigger: CCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGT...ACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CAA 90 bp CAGCCAGCTGTTGATGTGAAGCCGAACTACGCCCGACGTGCACAGGCTGTCATAGGGGAAGGATCTGTTTaGGAGATCTGCCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: QPAVDVKPNYARRAQAVIGEGSV*EICPRA
Trigger: TGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCCC...TATGACAGCCTGTGCACGTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp ATCAACCCATGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGGGGAAGGATCTGTTTaGGAGATCTGGAATCGCCGT +
Preference number: 5 (lower is better)
Translates to: INPCLELALPPGHESWGPGEGSV*EIWNRR
Trigger: ACGGCGATTCCAGATCTCCAAAACAGATCCTTCCCC...AGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACATGGGTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS CCA 90 bp GACAGAGTGAAACTTTGTCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGCGGCTTACTT +
Preference number: 5 (lower is better)
Translates to: DRVKLCLESPSCSSA*SPVLLAAYLLRGLL
Trigger: AAGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGACAAAGTTTCACTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS CCA 90 bp AGGATCTGTTTTGGAGATCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGCGGCTTACTT +
Preference number: 5 (lower is better)
Translates to: RICFGDLESPSCSSA*SPVLLAAYLLRGLL
Trigger: AAGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGATCTCCAAAACAGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS-3UTR CAA 90 bp TCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACCCTAGAGGTGAGGTaGCAGCAAGCCGAGATCACA +
Preference number: 5 (lower is better)
Translates to: SCCSTVAIRRDRLCRQFITLEVR*QQAEIT
Trigger: TGTGATCTCGGCTTGCTGCAACCTCACCTCTAGGGT...GATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS CCA 90 bp AGAATAACATCTGAAAACCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGCGGCTTACCA +
Preference number: 5 (lower is better)
Translates to: RITSENLESPSCSSA*SPVLLAAYLLRGLP
Trigger: TGGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGGTTTTCAGATGTTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457916.5
CDS-3UTR CAA 90 bp CCTCGTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTAATAACATCTGAAAACTaGTCTGGGACGCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: PRAAARWRYDGTGYADSLITSEN*SGTPGA
Trigger: AGCACCCGGCGTCCCAGACAAGTTTTCAGATGTTAT...TAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483663.5
CDS CCA 90 bp AGAATAACATCTGAAAACCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGCGGCTTACTT +
Preference number: 5 (lower is better)
Translates to: RITSENLESPSCSSA*SPVLLAAYLLRGLL
Trigger: AAGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGGTTTTCAGATGTTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp TGTCTGGAGCTAGCTCTTCCTCCAGGACACGAGAGCTGGGGGCCTGAGTACGTACCACACATTTCAGACTaGGTTGCCAAAATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: CLELALPPGHESWGPEYVPHISD*VAKIVA
Trigger: GGCAACAATTTTGGCAACCAAGTCTGAAATGTGTGG...TACGTACTCAGGCCCCCAGCTCTCGTGTCCTGGAGGAAGAGCTAGCTCCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp CTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGGGCAGCAGCCCTTCAGTTCAAATTTTaGGCCACACATTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: LRVRQGLEGSVGTQRAAALQFKF*ATHFRL
Trigger: AAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAG...GGCTGCTGCCCTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS TCA 90 bp CACAAGCCCAGACACTGTTTAAAAAGAGGCTGTGGGCAGGTACCCTaGGAGCAGAAAGTCCTCTCCTTGGATCTACCTGAAAGTCCACCC +
Preference number: 5 (lower is better)
Translates to: HKPRHCLKRGCGQVP*EQKVLSLDLPESPP
Trigger: GGGTGGACTTTCAGGTAGATCCAAGGAGAGGACTTTCTGCTCTCAGGGTACCTGCCCACAGCCTCTTTTTAAACAGTGTCTGGGCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp GCATGCTGTAGCAGTGTTGGGTGCCCAACAAATCGCACATTATCAATCTTCAGTCTGAACAGCAGCTTATaGCCCCTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: ACCSSVGCPTNRTLSIFSLNSSL*PLLPEL
Trigger: GAGCTCGGGGAGCAGGGGCAATAAGCTGCTGTTCAG...ACTGAAGATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CAA 90 bp GTGGAGATGCCTACGCGTGCGGCAAGGACTGGAGGGAAGCGTAGGAACACAGAGACATTTCAGACTTGGTaGCCAAAATTGTTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VEMPTRAARTGGKRRNTETFQTW*PKLLPE
Trigger: TTCTGGCAACAATTTTGGCAACCAAGTCTGAAATGT...CTCTGTGTTCCTACGCTTCCCTCCAGTCCTTGCCGCACGCGTAGGCATCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp CGGTGTGGATGCTGGGGAGAATCATCAGTGTGGGAGCCGAAAGCCCCCGAGGGTCTTCAGTTCAAATTTTaGGCCACACATTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: RCGCWGESSVWEPKAPEGLQFKF*ATHFRL
Trigger: AAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAG...ACCCTCGGGGGCTTTCGGCTCCCACACTGATGATTCTCCCCAGCATCCACACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp TCTGCGTTGGCCCTCAGTGCAAACACCACATTAAAAAGAATCATAGTAGGTGCTGCATGGTCGCCCGTGTaGCTGGCAGCGTATCTGCTA +
Preference number: 5 (lower is better)
Translates to: SALALSANTTLKRIIVGAAWSPV*LAAYLL
Trigger: TAGCAGATACGCTGCCAGCAACACGGGCGACCATGC...AGCACCTACTATGATTCTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457916.5
CDS-3UTR CAA 90 bp GTGCTGGGGAGGGGGCCACAGGGCACTTCACAAATAGAAGGCTGTCAGAGAGACACATTTCAGACTTGGTaGCCAAAATTGTTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VLGRGPQGTSQIEGCQRDTFQTW*PKLLPE
Trigger: TTCTGGCAACAATTTTGGCAACCAAGTCTGAAATGT...GTCTCTCTGACAGCCTTCTATTTGTGAAGTGCCCTGTGGCCCCCTCCCCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399953.7
ENST00000611875.5
CDS-3UTR CAA 90 bp GTGCTGCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACCCACACATTTCAGACTaGGTTGCCAAAATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: VLQHGGDTTGQVMQTVYHPHISD*VAKIVA
Trigger: GGCAACAATTTTGGCAACCAAGTCTGAAATGTGTGG...GTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS TCA 90 bp GTAGAGTCCAGTCCCCATGAGAAAGTACTGCCCAGACTCAGGCGTTaGACAGTAAGGAGTGTGAGACACATCAGTGTCCTCAGATACACA +
Preference number: 5 (lower is better)
Translates to: VESSPHEKVLPRLRR*TVRSVRHISVLRYT
Trigger: TGTGTATCTGAGGACACTGATGTGTCTCACACTCCTTACTGTTCAACGCCTGAGTCTGGGCAGTACTTTCTCATGGGGACTGGACTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS-3UTR CAA 90 bp CGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCTGCACATTTCAGACTTGGTaGCCAAAATTGTTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: RRDRLCRQFITDGSALACTFQTW*PKLLPE
Trigger: TTCTGGCAACAATTTTGGCAACCAAGTCTGAAATGT...GCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456528.5
CDS-3UTR CAA 90 bp TTGATCACCCGCACTAGGGCAGGGGAGCAGTCAATAGGAAGCTCACCCAGCAAGACATTTCAGACTTGGTaGCCAAAATTGTTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: LITRTRAGEQSIGSSPSKTFQTW*PKLLPE
Trigger: TTCTGGCAACAATTTTGGCAACCAAGTCTGAAATGT...CTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCTAGTGCGGGTGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp AGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGACATTTCAGACTTGGTaGCCAAAATTGTTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: STVAIRRDRLCRQFITDGTFQTW*PKLLPE
Trigger: TTCTGGCAACAATTTTGGCAACCAAGTCTGAAATGT...CCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp CCTCAGTGCAAACACCACATTAAAAAGAATCATAGTAGGTGCTTCCCTCTTCGGACAGCAGATGTGGTCTaGATCACCCGCACTAGGGCA +
Preference number: 5 (lower is better)
Translates to: PQCKHHIKKNHSRCFPLRTADVV*ITRTRA
Trigger: TGCCCTAGTGCGGGTGATCAAGACCACATCTGCTGT...CCGAAGAGGGAAGCACCTACTATGATTCTTTTTAATGTGGTGTTTGCACTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp CCCAGAGCATGCTGTAGCAGTGTTGGGTGCCCAACAAATCGCACATTATCAATCCCACACATTTCAGACTaGGTTGCCAAAATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: PRACCSSVGCPTNRTLSIPHISD*VAKIVA
Trigger: GGCAACAATTTTGGCAACCAAGTCTGAAATGTGTGG...GATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp AGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGGGCTTCAGTTCAAATTTTaGGCCACACATTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: STVAIRRDRLCRQFITDGLQFKF*ATHFRL
Trigger: AAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAG...CCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp GGGACAGGTTATGCAGACAGTTTATCACTGACGGGTCTGCGTTGGCCCTCAGTGCTTCAGTTCAAATTTTaGGCCACACATTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: GTGYADSLSLTGLRWPSVLQFKF*ATHFRL
Trigger: AAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAG...CACTGAGGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457916.5
ENST00000483663.5
CDS-3UTR CAA 90 bp GCAGCACGGTGGCGATACGACGGGACAGGTTATGCAGACAGTTTATCACTGACGCTTCAGTTCAAATTTTaGGCCACACATTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: AARWRYDGTGYADSLSLTLQFKF*ATHFRL
Trigger: AAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAG...CGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456528.5
ENST00000457916.5
ENST00000483663.5
CDS CCA 90 bp TTTGCTTGGCCTGGATTTTATCTTGAAATACTTTTGACAGCTGGCTaGTTGAGGGTATCTGCTCACAGGAACGCCGCATTTGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: FAWPGFYLEILLTAG*LRVSAHRNAAFAGF
Trigger: AAAGCCAGCAAATGCGGCGTTCCTGTGAGCAGATACCCTCAACCAGCCAGCTGTCAAAAGTATTTCAAGATAAAATCCAGGCCAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 90 bp AGCGGTGCCCTGGGGGTCCTACTTGGGGAGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCAGTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SGALGVLLGEPKLRA*GVLRLRPPTRAVKG
Trigger: CCCCTTCACTGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGGCTCCCCAAGTAGGACCCCCAGGGCACCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 72 bp CTGGGGGTCCTACTTGGGGAGCCAAAGCTGAGGGCGTaGGGCGTGCTGAGGCTGCGACCGCCGACCCGGGCA +
Preference number: 6 (lower is better)
Translates to: LGVLLGEPKLRA*GVLRLRPPTRA
Trigger: TGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCCTCAGCTTTGGCTCCCCAAGTAGGACCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 90 bp GCATCAGCCATGGCGGACACCTCATCCTGGAGCGCCAGGATCAGCTaGGCCTCCCGGGTGAGGTACTGGCAGCGGCGCTCCTCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: ASAMADTSSWSARIS*ASRVRYWQRRSSCC
Trigger: GCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS CCA 72 bp CGGCGCTGCAGCATCCACACCACCATCTGGATGAGCTaGGTCTGCGGGTGGCAGCAGGTGAGGCTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: RRCSIHTTIWMS*VCGWQQVRLVP
Trigger: GGGGACCAGCCTCACCTGCTGCCACCCGCAGACCCAGCTCATCCAGATGGTGGTGTGGATGCTGCAGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp CGTGCACAGGCATCAGCCATGGCGGACACCTCATCCTaGAGCGCCAGGATCAGCTTGGCCTCCCGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RAQASAMADTSS*SARISLASRVR
Trigger: CCTCACCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGATGCCTGTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS CCA 72 bp CGGAGCCTCACGTGGCCGCAGCCCAAGAGTAGGGACTaGCTTGGCCACCTCCAGGCTAAGCTTCGGACTCCC +
Preference number: 6 (lower is better)
Translates to: RSLTWPQPKSRD*LGHLQAKLRTP
Trigger: GGGAGTCCGAAGCTTAGCCTGGAGGTGGCCAAGCCAGTCCCTACTCTTGGGCTGCGGCCACGTGAGGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp CCGCATTTGCTGGCTTTGTCCACTAGTGCTCGCCCCTaGCTGCTGATGCGGAGCCTCACGTGGCCGCAGCCC +
Preference number: 6 (lower is better)
Translates to: PHLLALSTSARP*LLMRSLTWPQP
Trigger: GGGCTGCGGCCACGTGAGGCTCCGCATCAGCAGCCAGGGGCGAGCACTAGTGGACAAAGCCAGCAAATGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 72 bp CATCAGCATGGTCGCCCGTGTTGCTGGCAGCGTATCTaGTACGCGGCTTACCCACGTGCCACGCTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: HQHGRPCCWQRI*YAAYPRATLRA
Trigger: AGCCCGGAGCGTGGCACGTGGGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468260.5
CDS CCA 72 bp CGCCGTCCTGCTCATCAGCATGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCGGCTTACCCACGTGCC +
Preference number: 6 (lower is better)
Translates to: RRPAHQHGRPCC*QRICYAAYPRA
Trigger: GGCACGTGGGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468260.5
CDS CCA 72 bp ACCCTCCTGGGAAGGGAGAGGGGCCAGGGGAACATCTaGATCACACCTGCACAGGCTCCCACCACACACCGG +
Preference number: 6 (lower is better)
Translates to: TLLGRERGQGNI*ITPAQAPTTHR
Trigger: CCGGTGTGTGGTGGGAGCCTGTGCAGGTGTGATCCAGATGTTCCCCTGGCCCCTCTCCCTTCCCAGGAGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 72 bp GCCTCACGTGGCCGCAGCCCAAGAGTAGGGACTGGCTaGGCCACCTCCAGGCTAAGCTTCGGACTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: ASRGRSPRVGTG*ATSRLSFGLPG
Trigger: ACCTGGGAGTCCGAAGCTTAGCCTGGAGGTGGCCAAGCCAGTCCCTACTCTTGGGCTGCGGCCACGTGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS TCA 72 bp TGCTGGCTTTGTCCACTAGTGCTCGCCCCTGGCTGCTaGTGCGGAGCCTCACGTGGCCGCAGCCCAAGAGTA +
Preference number: 6 (lower is better)
Translates to: CWLCPLVLAPGC*CGASRGRSPRV
Trigger: TACTCTTGGGCTGCGGCCACGTGAGGCTCCGCATCAGCAGCCAGGGGCGAGCACTAGTGGACAAAGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 72 bp TCTCCACGGGGGACACGAGGCACGTGCATGTGCGTGTaGAGCTGTGTGGAGGCCCCTCATCACTCACAGCAC +
Preference number: 6 (lower is better)
Translates to: SPRGTRGTCMCV*SCVEAPHHSQH
Trigger: GTGCTGTGAGTGATGAGGGGCCTCCACACAGCTGCACACGCACATGCACGTGCCTCGTGTCCCCCGTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 72 bp ACAGGAGAGGTGTCTCCACGGGGGACACGAGGCACGTaGATGTGCGTGTGCAGCTGTGTGGAGGCCCCTCAT +
Preference number: 6 (lower is better)
Translates to: TGEVSPRGTRGT*MCVCSCVEAPH
Trigger: ATGAGGGGCCTCCACACAGCTGCACACGCACATGCACGTGCCTCGTGTCCCCCGTGGAGACACCTCTCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp ATGAGAAGCCGGCGCTGCAGCATCCACACCACCATCTaGATGAGCTGGGTCTGCGGGTGGCAGCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: MRSRRCSIHTTI*MSWVCGWQQVR
Trigger: CCTCACCTGCTGCCACCCGCAGACCCAGCTCATCCAGATGGTGGTGTGGATGCTGCAGCGCCGGCTTCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 90 bp TGGTTCAGTGGCGAGTCCCCGCTGGGAAGTAGCTCTGCGCTGGAGTaGTCCATGCTGGGGCTGGTGAGGGTCATGTCATCGCTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: WFSGESPLGSSSALE*SMLGLVRVMSSLLA
Trigger: AGCCAGCAGCGATGACATGACCCTCACCAGCCCCAGCATGGACAACTCCAGCGCAGAGCTACTTCCCAGCGGGGACTCGCCACTGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 72 bp GTGAGAGCCTGGCCTTGGGGCTTCCACAGCCTTTGGTaGCTGGCCAACACAGAGAACAGCATCTGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: VRAWPWGFHSLW*LANTENSIWRA
Trigger: GGCCCTCCAGATGCTGTTCTCTGTGTTGGCCAGGCACCAAAGGCTGTGGAAGCCCCAAGGCCAGGCTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464069.1
CDS GCA 72 bp ATCACTCACAGCACCACCCACGTTGAGCCTCCTGGATaGCACCCCCAAGCGTCTCCCCTGACTACCACAGCG +
Preference number: 6 (lower is better)
Translates to: ITHSTTHVEPPG*HPQASPLTTTA
Trigger: CGCTGTGGTAGTCAGGGGAGACGCTTGGGGGTGGCATCCAGGAGGCTCAACGTGGGTGGTGCTGTGAGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp CGCCGTCCTGCTCATCAGCATGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCGGCTTACTTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: RRPAHQHGRPCC*QRICYAAYLSG
Trigger: CCCAGACAAGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399953.7
ENST00000419636.1
ENST00000456528.5
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS CCA 72 bp CATGGCTCGCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGC +
Preference number: 6 (lower is better)
Translates to: HGSLESPSCSSA*SPVLLAAYLLR
Trigger: GCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGCGAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419636.1
CDS CCA 72 bp TGCGTTGGCCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGC +
Preference number: 6 (lower is better)
Translates to: CVGLESPSCSSA*SPVLLAAYLLR
Trigger: GCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGGCCAACGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS CCA 72 bp CGCCGTCCTGCTCATCAGCATGGTCGCCCGTGTTGCTaGCAGCGTATCTGCTACGCGGCTTACCAGAATCAC +
Preference number: 6 (lower is better)
Translates to: RRPAHQHGRPCC*QRICYAAYQNH
Trigger: GTGATTCTGGTAAGCCGCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457916.5
CDS TCA 72 bp TTGGGACCTGGGTATGCTAGTGGCCAGGAGTTAGGCTaGAGTGAGAGCCTGGCCTTGGGGCTTCCACAGCCT +
Preference number: 6 (lower is better)
Translates to: LGPGYASGQELG*SESLALGLPQP
Trigger: AGGCTGTGGAAGCCCCAAGGCCAGGCTCTCACTTCAGCCTAACTCCTGGCCACTAGCATACCCAGGTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464069.1
CDS TCA 72 bp ATGGCCCTAGACATGGCCACAGCACGCTCCCTGTGCTaGCGCACAGGCAGAAAGGCCCTCTTCTCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: MALDMATARSLC*RTGRKALFSER
Trigger: CCTTTCTGAGAAGAGGGCCTTTCTGCCTGTGCGTCAGCACAGGGAGCGTGCTGTGGCCATGTCTAGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 72 bp GGCGACAGAGTGAAACTTTGTCTGGAATCGCCGTCCTaGTCATCAGCATGGTCGCCCGTGTTGCTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: GDRVKLCLESPS*SSAWSPVLLAA
Trigger: CGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGACAAAGTTTCACTCTGTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456528.5
ENST00000468260.5
CDS CCA 72 bp CTACGCGGCTTACTTGTCTGGGACGCCGGGTGCTCCTaGCTTCTCTGGAAGGGGTACCTGAACAGCAGCTTA +
Preference number: 6 (lower is better)
Translates to: LRGLLVWDAGCS*LLWKGYLNSSL
Trigger: TAAGCTGCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399953.7
ENST00000419636.1
ENST00000456528.5
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS CCA 72 bp CTCACCCAGGATGGAGGACAAAGCACCCTGGGCAGGTaGGGTCCTCACATGAAGCATGAAGCCTACAGCCAG +
Preference number: 6 (lower is better)
Translates to: LTQDGGQSTLGR*GPHMKHEAYSQ
Trigger: CTGGCTGTAGGCTTCATGCTTCATGTGAGGACCCCACCTGCCCAGGGTGCTTTGTCCTCCATCCTGGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp TTACTTGTCTGGGACGCCGGGTGCTCCTGGCTTCTCTaGAAGGGGTACCTGAACAGCAGCTTATTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LLVWDAGCSWLL*KGYLNSSLLPL
Trigger: CAGGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTCCCAGACAAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399953.7
ENST00000419636.1
ENST00000456528.5
ENST00000611875.5
ENST00000621703.4
ENST00000622194.4
CDS CCA 72 bp TCTGAAAACCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGC +
Preference number: 6 (lower is better)
Translates to: SENLESPSCSSA*SPVLLAAYLLR
Trigger: GCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGGTTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399953.7
ENST00000457916.5
ENST00000611875.5
CDS CCA 72 bp CAGTTCATCCTGCATCTCACCTCTGATCCCTCAAGGTaGATTAGAAGAGCCAGCCTGGAGGAGGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: QFILHLTSDPSR*IRRASLEEGAR
Trigger: CCTGGCCCCCTCCTCCAGGCTGGCTCTTCTAATCCACCTTGAGGGATCAGAGGTGAGATGCAGGATGAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464069.1
CDS CCA 72 bp AAACTTGTCTGGGACGCCGGGTGCTCCTGGCTTCTCTaGAAGGGGTACCTGAACAGCAGCTTATTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: KLVWDAGCSWLL*KGYLNSSLLPL
Trigger: CAGGGGCAATAAGCTGCTGTTCAGGTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTCCCAGACAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483663.5
CDS CCA 72 bp GGCTGGGGCAGAGATTCCAGCACTGATTTGCTGGGCTaGGAGCTGCCCCTAATTCTAGCAAGCCTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: GWGRDSSTDLLG*ELPLILASLLK
Trigger: CTTCAGCAGGCTTGCTAGAATTAGGGGCAGCTCCCAGCCCAGCAAATCAGTGCTGGAATCTCTGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp TTTGGAGATCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGC +
Preference number: 6 (lower is better)
Translates to: FGDLESPSCSSA*SPVLLAAYLLR
Trigger: GCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGATCTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622194.4
CDS TCA 72 bp GATACGACGGGACAGGTTATGCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCTGGAATCGCCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: DTTGQVMQTVYH*RVCVGLESPSC
Trigger: GCAGGACGGCGATTCCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621703.4
CDS CCA 72 bp AAACTTTGTCTGGAATCGCCGTCCTGCTCATCAGCATaGTCGCCCGTGTTGCTGGCAGCGTATCTGCTACGC +
Preference number: 6 (lower is better)
Translates to: KLCLESPSCSSA*SPVLLAAYLLR
Trigger: GCGTAGCAGATACGCTGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGACAAAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456528.5
ENST00000468260.5
CDS TCA 72 bp GTGAGGAGCCTTGTGCCAGGTAGAGTCCAGTCCCCATaGGAAAGTACTGCCCAGACTCAGGCGTTGAACAGT +
Preference number: 6 (lower is better)
Translates to: VRSLVPGRVQSP*ESTAQTQALNS
Trigger: ACTGTTCAACGCCTGAGTCTGGGCAGTACTTTCTCATGGGGACTGGACTCTACCTGGCACAAGGCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp AGGCTCTGGCAGCCAGCAGCACTCACAGACATACGCTaGCATTGGGAGACAGCATGTAGACGTTGTTCTCAC +
Preference number: 6 (lower is better)
Translates to: RLWQPAALTDIR*HWETACRRCSH
Trigger: GTGAGAACAACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTCTGTGAGTGCTGCTGGCTGCCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464069.1
CDS TCA 72 bp GATACGACGGGACAGGTTATGCAGACAGTTTATCACTaGCGGGTCTGCGTTGGCCAGAATCACGCTGATGGG +
Preference number: 6 (lower is better)
Translates to: DTTGQVMQTVYH*RVCVGQNHADG
Trigger: CCCATCAGCGTGATTCTGGCCAACGCAGACCCGTCAGTGATAAACTGTCTGCATAACCTGTCCCGTCGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422814.5
CDS CCA 72 bp TCAGTGTCCTCAGATACACATCTGTCTACTCATCTCTaGGAGGGTCAACAAGGAGCTGCTGGCCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: SVSSDTHLSTHL*EGQQGAAGQGH
Trigger: GTGACCCTGGCCAGCAGCTCCTTGTTGACCCTCCCAGAGATGAGTAGACAGATGTGTATCTGAGGACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CCA 72 bp GTGGGCAGGTACCCTGAGAGCAGAAAGTCCTCTCCTTaGATCTACCTGAAAGTCCACCCTGAGCACAAGAGT +
Preference number: 6 (lower is better)
Translates to: VGRYPESRKSSP*IYLKVHPEHKS
Trigger: ACTCTTGTGCTCAGGGTGGACTTTCAGGTAGATCCAAGGAGAGGACTTTCTGCTCTCAGGGTACCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS TCA 72 bp AGTCCCCATGAGAAAGTACTGCCCAGACTCAGGCGTTaGACAGTAAGGAGTGTGAGACACATCAGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: SPHEKVLPRLRR*TVRSVRHISVL
Trigger: GAGGACACTGATGTGTCTCACACTCCTTACTGTTCAACGCCTGAGTCTGGGCAGTACTTTCTCATGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS TCA 72 bp AAAGTCCTCTCCTTGGATCTACCTGAAAGTCCACCCTaGGCACAAGAGTGGATCCACAAGAAAGCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: KVLSLDLPESPP*AQEWIHKKAEA
Trigger: GGCCTCAGCTTTCTTGTGGATCCACTCTTGTGCTCAGGGTGGACTTTCAGGTAGATCCAAGGAGAGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS TCA 72 bp ACCCTGAGAGCAGAAAGTCCTCTCCTTGGATCTACCTaGAAGTCCACCCTGAGCACAAGAGTGGATCCACAA +
Preference number: 6 (lower is better)
Translates to: TLRAESPLLGST*KSTLSTRVDPQ
Trigger: TTGTGGATCCACTCTTGTGCTCAGGGTGGACTTTCAGGTAGATCCAAGGAGAGGACTTTCTGCTCTCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 90 bp GCTTGGCCTGGATTTTATCTTGAAATACTTTTGACAGCTGGCTGGTaGAGGGTATCTGCTCACAGGAACGCCGCATTTGCTGGCTTTGTC +
Preference number: 6 (lower is better)
Translates to: AWPGFYLEILLTAGW*RVSAHRNAAFAGFV
Trigger: GACAAAGCCAGCAAATGCGGCGTTCCTGTGAGCAGATACCCTCAACCAGCCAGCTGTCAAAAGTATTTCAAGATAAAATCCAGGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS TCA 72 bp AGACACTGTTTAAAAAGAGGCTGTGGGCAGGTACCCTaGGAGCAGAAAGTCCTCTCCTTGGATCTACCTGAA +
Preference number: 6 (lower is better)
Translates to: RHCLKRGCGQVP*EQKVLSLDLPE
Trigger: TTCAGGTAGATCCAAGGAGAGGACTTTCTGCTCTCAGGGTACCTGCCCACAGCCTCTTTTTAAACAGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS GCA 72 bp GAGATCTGCCCCAGAGCATGCTGTAGCAGTGTTGGGTaGCCAACAAATCGCACATTATCAATCTTCAGTTCA +
Preference number: 6 (lower is better)
Translates to: EICPRACCSSVG*PTNRTLSIFSS
Trigger: TGAACTGAAGATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419636.1
ENST00000457916.5
ENST00000468260.5
ENST00000473674.5
ENST00000483663.5
ENST00000611875.5
CDS CAA 72 bp TTTTGGAGATCTGCCCCAGAGCATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCACATTATCAATCTTCA +
Preference number: 6 (lower is better)
Translates to: FWRSAPEHAVAV*GAQQIAHYQSS
Trigger: TGAAGATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGATCTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000419636.1
ENST00000457916.5
ENST00000468260.5
ENST00000473674.5
ENST00000483663.5
ENST00000611875.5
CDS CCA 72 bp CCTGGATTTTATCTTGAAATACTTTTGACAGCTGGCTaGTTGAGGGTATCTGCTCACAGGAACGCCGCATTT +
Preference number: 6 (lower is better)
Translates to: PGFYLEILLTAG*LRVSAHRNAAF
Trigger: AAATGCGGCGTTCCTGTGAGCAGATACCCTCAACCAGCCAGCTGTCAAAAGTATTTCAAGATAAAATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 72 bp GGATTTTATCTTGAAATACTTTTGACAGCTGGCTGGTaGAGGGTATCTGCTCACAGGAACGCCGCATTTGCT +
Preference number: 6 (lower is better)
Translates to: GFYLEILLTAGW*RVSAHRNAAFA
Trigger: AGCAAATGCGGCGTTCCTGTGAGCAGATACCCTCAACCAGCCAGCTGTCAAAAGTATTTCAAGATAAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610509.1
CDS CAA 90 bp AAGGATCTGTTTTGGAGATCTGCCCCAGAGCATGCTGTAGCAGTGTaGGGTGCCCAACAAATCGCACATTATCAATCTTCAGTTCAAATT +
Preference number: 6 (lower is better)
Translates to: KDLFWRSAPEHAVAV*GAQQIAHYQSSVQI
Trigger: AATTTGAACTGAAGATTGATAATGTGCGATTTGTTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGATCTCCAAAACAGATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000419636.1
ENST00000457916.5
ENST00000468260.5
ENST00000473674.5
ENST00000483663.5
ENST00000611875.5
CDS GCA 72 bp TATCCCAGGCAAGTAAGAAGACTTGGTCAAAAGGACTaGAAGATATCCAGACTTCACATGAATTTAAGAAAT +
Preference number: 6 (lower is better)
Translates to: YPRQVRRLGQKD*KISRLHMNLRN
Trigger: ATTTCTTAAATTCATGTGAAGTCTGGATATCTTGCAGTCCTTTTGACCAAGTCTTCTTACTTGCCTGGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610509.1