RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169418

Ensembl transcript IDs: ENST00000368677.2, ENST00000368680.4, ENST00000413826.1

Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCCCGGCCTGAGTCCAGGTGGAGAGCAGGTGCGTGTGCCTGTGTaGGTGTCCCTGTGCATGGCCGTGGGCTTGGCTCAGCCTGTAAGC +
Preference number: 1 (lower is better)
Translates to: QPGLSPGGEQVRVPV*VSLCMAVGLAQPVS
Trigger: GCTTACAGGCTGAGCCAAGCCCACGGCCATGCACAGGGACACTCACACAGGCACACGCACCTGCTCTCCACCTGGACTCAGGCCGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR TCA 90 bp CCTCTCAGAGGTCCTATCTGGTGTCTTCACTGGGGTCAGCACACCTaGGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: PLRGPIWCLHWGQHT*AIQITSILWRWGCC
Trigger: ACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGGTGTGCTGACCCCAGTGAAGACACCAGATAGGACCTCTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR-3UTR TCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCCAGCCCAGCCCGGCCTaGGTCCAGGTGGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPQPSPA*VQVESR
Trigger: CCTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTG...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR-3UTR CCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCCGGCCTGAGTCCAGGTaGAGAGCAGGTGCGTGTGCC +
Preference number: 2 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVRPESR*RAGACA
Trigger: GGCACACGCACCTGCTCTCCACCTGGACTCAGGCCG...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR-3UTR GCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCGCCTGGCACCTCTGTTaGTTCTGGCACAGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVAWHLC*FWHRVG
Trigger: CCCTACCCTGTGCCAGAAGCAACAGAGGTGCCAGGC...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR-3UTR CCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTGAGTGTCCCTGTGCATaGCCGTGGGCTTGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFECPCA*PWAWLS
Trigger: GCTGAGCCAAGCCCACGGCCATGCACAGGGACACTC...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR-3UTR TCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGTGGGGTCAGCACACCTaGGCTATTCAAATTACTTCC +
Preference number: 2 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQWGQHT*AIQITS
Trigger: GGAAGTAATTTGAATAGCTCAGGTGTGCTGACCCCA...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR-3UTR CCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCACCTCTGTTGCTTCTaGCACAGGGTAGGGAGGTGT +
Preference number: 2 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEHLCCF*HRVGRC
Trigger: ACACCTCCCTACCCTGTGCCAGAAGCAACAGAGGTG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
3UTR-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTATTACTTCCATCCTTTaGCGATGGGGCTGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGITSIL*RWGCCG
Trigger: CCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAAT...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCGGTTGCCCGCGTGGCTaGCCCGGAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPGCPRG*PGAAAA
Trigger: TGCTGCTGCTGCTCCGGGGCAGCCACGCGGGCAACC...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCAGCGGGACCCGCCAGTaGGCGGTGAAGCGCCCCACT +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPSGTRQ*AVKRPT
Trigger: AGTGGGGCGCTTCACCGCGCACTGGCGGGTCCCGCT...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCGCGCCGCGGAGCAGGTaGGTGCCAGGAGAACGTCGG +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPAPRSR*VPGERR
Trigger: CCGACGTTCTCCTGGCACCCACCTGCTCCGCGGCGC...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGTGCTCCTGGGGCCGGTaGCGGATTCGGAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQCSWGR*RIRKER
Trigger: GCGCTCCTTCCGAATCCGCCACCGGCCCCAGGAGCA...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCTGGGCCCCGCGCGGGTaGTCAGCGCATACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPWAPRG*SAHTRP
Trigger: AGGACGAGTATGCGCTGACCACCCGCGCGGGGCCCA...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGCTCTCTCCCAGGGCCTaGGGGGAGCAGGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWLSPRA*GEQGPV
Trigger: GACAGGGCCCTGCTCCCCGCAGGCCCTGGGAGAGAG...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCCGAGCGCTCCTACCATaGCCTCCTCGGTCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPRALLP*PPRSPW
Trigger: CCAAGGGGACCGAGGAGGCCATGGTAGGAGCGCTCG...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCCCAGCTTGGCGTAGCTaGGCCCCGCGCGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVPAWRS*APRGWS
Trigger: TGACCACCCGCGCGGGGCCCAGCTACGCCAAGCTGG...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGGTTGTGCTCCCACTTaGGGTCCACCGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWGCAPT*GPPRPG
Trigger: CCCTGGCCGCGGTGGACCTCAAGTGGGAGCACAACC...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCGCCTGGTGTAGTGGCTaGGGTCGTCCTCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPAWCSG*GRPRRT
Trigger: AGTTCGCCGAGGACGACCTCAGCCACTACACCAGGC...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCGCCCCGCACAGGGGGTaGAGCCATTCGCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVAPHRG*SHSQEL
Trigger: GAGCTCCTGCGAATGGCTTCACCCCCTGTGCGGGGC...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCAGCAGGGTCACCACCTaGATGGGTGTGCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPSRVTT*MGVLSA
Trigger: GGCGGAGAGCACACCCATGCAGGTGGTGACCCTGCT...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGGCCCCCAACCCTTCTaGGCCACCCCTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWGPQPF*ATPLLP
Trigger: GGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGGGGCC...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCCGGCTACCGTCAGGTTaGCCGCGTGGCTGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLRLPSG*PRGCPG
Trigger: TCCGGGGCAGCCACGCGGGCAACCTGACGGTAGCCG...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGTCAGGGTCAGCCGGCTaGCTGCACTCCGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWSGSAG*LHSAGA
Trigger: GGCACCTGCGGAGTGCAGGCAGCCGGCTGACCCTGA...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCAAGCGCAGCTGCTCCTaGGGCCGGTGGCGGATTCGG +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVKRSCS*GRWRIR
Trigger: CCGAATCCGCCACCGGCCCCAGGAGCAGCTGCGCTT...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCCGAAGTCCCCCAGCTTaGCGTAGCTGGGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLRSPPA*RSWAPR
Trigger: GCGCGGGGCCCAGCTACGCCAAGCTGGGGGACTTCG...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCGCGCATACTCGTCCTTaGCACCGAAGCCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVAHTRP*HRSPAP
Trigger: CGGCGCTGGGCTTCGGTGTCAAGGACGAGTATGCGC...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGGGTAGGCGTAGAGCATaGGCGCTTGGCGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWGRRRA*ALGAPS
Trigger: GCTGGGAGCGCCAAGCGCTCATGCTCTACGCCTACC...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTAGGCCTGGCGGGCACTaGCATCCTGCCCATCCCCTC +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFRPGGH*HPAHPL
Trigger: GAGGGGATGGGCAGGATGTCAGTGCCCGCCAGGCCT...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGGCAGGGCCTCAGCCTTaGGCTTCTCCTCCAGGTATG +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQAGPQP*ASPPGM
Trigger: CATACCTGGAGGAGAAGCGCAAGGCTGAGGCCCTGC...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCGCGCGTTTTCGCTGCTaGCCAGCACCGTGCGGACCG +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLARFRC*PAPCGP
Trigger: CGGTCCGCACGGTGCTGGGCAGCAGCGAAAACGCGC...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTGGTCAGCCGGCTGCCTaGACTCCGCAGGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFGQPAA*TPQVPL
Trigger: GAGAGGCACCTGCGGAGTGCAGGCAGCCGGCTGACC...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCGCGGATCTGCTGGAATaGTGGCCTCTCCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPADLLE*WPLLWV
Trigger: GACCCACAGGAGAGGCCACCATTCCAGCAGATCCGC...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGCCGCACAGGGAGCCCTaGCACCACCATGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWPHREP*HHHVGI
Trigger: GATGCCTACATGGTGGTGTCAGGGCTCCCTGTGCGG...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTCCAGCGCGTTTTCGCTaGTGCCCAGCACCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFPARFR*CPAPCG
Trigger: TCCGCACGGTGCTGGGCAGCAGCGAAAACGCGCTGG...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCCCTGCACTCCGCAGGTaGCTCTCAAGGCTACTGGGC +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVPALRR*LSRLLG
Trigger: GCCCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGG...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCGGGTCACCACCTGCATaGGTGTGCTCTCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVGSPPA*VCSPPT
Trigger: TGTCGGCGGAGAGCACACCCATGCAGGTGGTGACCC...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTCGGCCTGAGTCCAGGTaGAGAGCAGGTGCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFRPESR*RAGACA
Trigger: GGCACACGCACCTGCTCTCCACCTGGACTCAGGCCG...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCGTGTCTACTGCTGGGTaGAGGGGGTCGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLVSTAG*RGSGEQ
Trigger: CTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACAC...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGCACTGTGTCTACTGCTaGGTGGAGGGGGTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWHCVYC*VEGVGG
Trigger: TCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTG...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGGTCGTGGAAGGATGCTaGGATGGTGTTCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQVVEGC*DGVHQA
Trigger: GGCCTGGTGAACACCATCCCAGCATCCTTCCACGAC...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCAGGGAGCCGTAATTaGAGCCTCTCCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWAGSRN*SLSRSG
Trigger: CCCTGAGCGGGAGAGGCTCCAATTACGGCTCCCTGC...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGGATCTGCTGGAATGGTaGCCTCTCCTGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQDLLEW*PLLWVL
Trigger: GAGGACCCACAGGAGAGGCCACCATTCCAGCAGATC...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTCAGGTCAGCCTCGGGTaGTACTCCCCCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFQVSLG*YSPSPQ
Trigger: TTGGGGAGAGGGGGAGTAGCACCCGAGGCTGACCTG...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCGGGCCCTGTCCACCTTaGAGGCTTTGCCCAAAGATA +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPGPCPP*RLCPKI
Trigger: TATCTTTGGGCAAAGCCTGCAAGGTGGACAGGGCCC...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCGGGGAGCAGGTATTGTaGGCCAGCCCCAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLGEQVL*ASPRCG
Trigger: CCCACATCTGGGGCTGGCCCACAATACCTGCTCCCC...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTCAGGCGCGTCCCTATaGGAAGGAGCAGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLSGASL*EGAGAG
Trigger: TCCCGCTCCTGCTCCTTCCCATAGGGACGCGCCTGA...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTATACGTCACCAGCCTaGGAGCCCCGCACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLYTSPA*EPRTGG
Trigger: ACCCCCTGTGCGGGGCTCCCAGGCTGGTGACGTATA...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTCAAAGGCTTCGGCCTaGACCGTCTCCCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLSKASA*TVSPRF
Trigger: GAAGCGTGGGGAGACGGTGCAGGCCGAAGCCTTTGA...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCCAGGTCCTGTGTGGATaGCAATGCGCAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVQVLCG*QCASAA
Trigger: AGCTGCGCTTGCGCATTGGCATCCACACAGGACCTG...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGCCACCTTGCAGGCTTTaGCCAAAGATATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQPPCRL*PKISRW
Trigger: CCACCTGGATATCTTTGGGCAAAGCCTGCAAGGTGG...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCCAGAGTCTCCGTCACTaGCTGGATATAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPQSLRH*LDIEQE
Trigger: CTCCTGCTCTATATCCAGGCAGTGACGGAGACTCTG...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGAGGAGACAATCAGAATaGCGAGCAAGGAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQRRQSE*RARRGC
Trigger: GCAGCCTCTCCTTGCTCGGCATTCTGATTGTCTCCT...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCCACACAGGTCCTGTGTaGATGCCAATGCGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVHTGPV*MPMRKR
Trigger: GCGCTTGCGCATTGGCATCCACACAGGACCTGTGTG...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCATTACTTCCATCCTTTaGCGATGGGGCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPITSIL*RWGCCG
Trigger: CCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAAT...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGTCAGGCGGATCTGCTaGAATGGTGGCCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWVRRIC*NGGLSC
Trigger: ACAGGAGAGGCCACCATTCCAGCAGATCCGCCTGAC...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCAGCCCAGCCCGGCCTaGGTCCAGGTGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEQPSPA*VQVESR
Trigger: CCTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCAGATTGTTCGCGTACTaGTCCATGCGGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVRLFAY*SMRDSR
Trigger: CCTGCTGTCCCGCATGGAGCAGTACGCGAACAATCT...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGGAACAACTGGGAGTGTaGGTGCGTGTTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQEQLGV*VRVRER
Trigger: TCTCTCTCTAACACGCACGCACACTCCCAGTTGTTC...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCAACACAGCGGGGTTGTaGTCCCACTTGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLNTAGL*SHLRST
Trigger: GGTGGACCTCAAGTGGGAGCACAACCCCGCTGTGTT...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCAGCCCAGCCGTCGGTaGAGCGCCGCCACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEQPSRR*SAATKS
Trigger: GGACTTCGTGGCGGCGCTGCACCGACGGCTGGGCTG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGCACCTCTGTTGCTTCTaGCACAGGGTAGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWHLCCF*HRVGRC
Trigger: ACACCTCCCTACCCTGTGCCAGAAGCAACAGAGGTG...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGGTCAGGTTGCCCGCGTaGCTGCCCCGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEVRLPA*LPRSSS
Trigger: GCTGCTGCTCCGGGGCAGCCACGCGGGCAACCTGAC...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGGGTGAAGCGCCCCACTaGGGCGGCGGCGTACACGCA +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEGEAPH*GGGVHA
Trigger: TGCGTGTACGCCGCCGCCCCAGTGGGGCGCTTCACC...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGCCAGCACCTCCAGGGTaGAAAGGTGATCTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWPAPPG*KGDLGC
Trigger: GCAACCAAGATCACCTTTCCACCCTGGAGGTGCTGG...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGAAGTGTACAGGTCATTaGGCAGGGTCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWKCTGH*AGSPPA
Trigger: TGCAGGTGGTGACCCTGCTCAATGACCTGTACACTT...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGGGTCGCGGACCCGCATaGACAGCCCCTCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEGRGPA*TAPPRG
Trigger: TCCTCGTGGAGGGGCTGTTCATGCGGGTCCGCGACC...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCTATCCTGTCACACCTTaGAAGCTTCGGTTCCACATC +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPYPVTP*KLRFHI
Trigger: GATGTGGAACCGAAGCTTTCAAGGTGTGACAGGATA...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTGGGGACAGTACTCTGTaGGGATGCAGATATTGGGGG +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFGDSTL*GCRYWG
Trigger: CCCCCAATATCTGCATCCTCACAGAGTACTGTCCCC...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGCGCAGTTGGATGACTTaGGGTTCCCATGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWRSWMT*GSHGNR
Trigger: TCTGTTCCCATGGGAACCTCAAGTCATCCAACTGCG...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGTACCACGCAGTTGGATaGCTTGAGGTTCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWYHAVG*LEVPMG
Trigger: TCCCATGGGAACCTCAAGTCATCCAACTGCGTGGTA...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCGCGGAGCAGGTGGGTaGCAGGAGAACGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGERGAGG*QENVGL
Trigger: CAGCCCGACGTTCTCCTGGCACCCACCTGCTCCGCG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGGAGGCCCCCTGTAGCTaGGACGGTCTGGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEEAPCS*DGLGRE
Trigger: CTCTCGGCCCAGACCGTCGCAGCTACAGGGGGCCTC...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGGTCAGGTGTTCATTCTaGACATCCCGCATATGCTTC +
Preference number: 4 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQVRCSF*TSRICF
Trigger: GAAGCATATGCGGGATGTGCAGAATGAACACCTGAC...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCCCTCCAGGACAGCCTTaGTCTCAGAAGACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVPPGQP*SQKTSG
Trigger: TCCACTTGTCTTCTGAGACCAAGGCTGTCCTGGAGG...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGCCGAGTGTGAACAACTaGGAGTGTGCGTGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWPSVNN*ECACVL
Trigger: TAACACGCACGCACACTCCCAGTTGTTCACACTCGG...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTGGGCGCGCCTTCACCTaGGCCAGGGCCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGGRAFT*ARASST
Trigger: CGTGGAGCTGGCCCTGGCCCAGGTGAAGGCGCGCCC...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGGCAAAGACTTGGAACTaGCCCTCTGTGGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWAKTWN*PSVVSR
Trigger: CCTGCTAACCACAGAGGGCCAGTTCCAAGTCTTTGC...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTCCAAACCTTCCACGTaGAAGACCCCACTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLSKPST*KTPLLR
Trigger: CCTGAGGAGTGGGGTCTTCCACGTGGAAGGTTTGGA...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGATGTTCCCCTTCAGGTaGCTCTTTCTCCTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWMFPFR*LFLLPV
Trigger: TACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACAT...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCAGTTCAGTACAACCCTaGAGGCACCATTCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVSSVQP*RHHSRD
Trigger: ATCCCGAGAATGGTGCCTTCAGGGTTGTACTGAACT...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGACATCCAGTCCAGGGTaGTGCTCTCATTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWTSSPG*CSHSPE
Trigger: TTCTGGAGAATGAGAGCATCACCCTGGACTGGATGT...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTCCTCCTCGGTCCCCTTaGGCTCAGCGGCCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGPPRSP*AQRPVP
Trigger: TGGGACCGGCCGCTGAGCCCAAGGGGACCGAGGAGG...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTTCGGCGAACTCCAGGTaGTCCACCGTAATATTGAGG +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFSANSR*STVILR
Trigger: CCTCAATATTACGGTGGACCACCTGGAGTTCGCCGA...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGTGTCAAAGCCACATTTaGGGATGTCAGGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWCQSHI*GCQEEG
Trigger: ACCCTCCTCCTGACATCCCCAAATGTGGCTTTGACA...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGTCTTGGCAAAGACTTaGAACTGGCCCTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWVLAKT*NWPSVV
Trigger: AACCACAGAGGGCCAGTTCCAAGTCTTTGCCAAGAC...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGTGGTGGCCTCTCCTGTaGGTCCTCAGCCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEWWPLL*VLSPAP
Trigger: CGGTGCTGGGCTGAGGACCCACAGGAGAGGCCACCA...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGTGGGGTCAGCACACCTaGGCTATTCAAATTACTTCC +
Preference number: 4 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWWGQHT*AIQITS
Trigger: GGAAGTAATTTGAATAGCTCAGGTGTGCTGACCCCA...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTGATGTCATTGGTGAGTaGGTACCGGAACATCCAGTC +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFDVIGE*VPEHPV
Trigger: GACTGGATGTTCCGGTACTCACTCACCAATGACATC...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTGCAGTGCCAGGGCCATaGGGGCTACCTCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGAVPGP*GLPRRR
Trigger: ACGCCTGCGAGGTAGCCCGCATGGCCCTGGCACTGC...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGGTGCACTGTGTCTACTaGTGGGTGGAGGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEVHCVY*WVEGVG
Trigger: CCCGACCCCCTCCACCCAGCAGTAGACACAGTGCAC...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGTCAGCCCAGCACCGCTaGATGAGCAGCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGESAQHR*MSSPNS
Trigger: GGAGTTGGGGCTGCTCATGCAGCGGTGCTGGGCTGA...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCATCTTGGTTGCATGCTaGGTCTTCGTTGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVILVAC*VFVVKA
Trigger: GGCTTTGACAACGAAGACCCAGCATGCAACCAAGAT...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCGACTTGAGGTTCCCATaGGAACAGATAGCCCCATTG +
Preference number: 4 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLDLRFP*EQIAPL
Trigger: CAATGGGGCTATCTGTTCCCATGGGAACCTCAAGTC...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGGCCTGGCACCTCTGTTaGTTCTGGCACAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEAWHLC*FWHRVG
Trigger: CCCTACCCTGTGCCAGAAGCAACAGAGGTGCCAGGC...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGTGTGTGTTTGTAGCGTaGGTGAGCGCCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGECVFVA*VSACPR
Trigger: CCTGGGGCAGGCGCTCACGCACGCTACAAACACACA...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGGTGATCTTGGTTGCATaGTGGGTCTTCGTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWVILVA*WVFVVK
Trigger: TTTGACAACGAAGACCCAGCATGCAACCAAGATCAC...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCAGCTGCTCAGCCACTaGGTGAGGCAGGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEQLLSH*VRQDLV
Trigger: TACCAGATCCTGCCTCACTCAGTGGCTGAGCAGCTG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACCACCTGCATGGGTGTaGTCTCCGCCGACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSPPAWV*SPPTAL
Trigger: CAGCGCTGTCGGCGGAGAGCACACCCATGCAGGTGG...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTCACAGCATCCAGCAGTaGCAGGGCCATGCGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGHSIQQ*QGHAGY
Trigger: GTAGCCCGCATGGCCCTGGCACTGCTGGATGCTGTG...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCAGGTGGAGAGCAGGTaGGTGTGCCTGTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEQVESR*VCLCEC
Trigger: ACACTCACACAGGCACACGCACCTGCTCTCCACCTG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCCCGTCGTGGAAGGATaGTGGGATGGTGTTCACCAG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEPVVEG*WDGVHQ
Trigger: CTGGTGAACACCATCCCAGCATCCTTCCACGACGGG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTTTCGTGTCAGCTCAATaGGTTTACGGTTCACACGTT +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFFVSAQ*VYGSHV
Trigger: AACGTGTGAACCGTAAACGCATTGAGCTGACACGAA...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGTTCTCCAGAATGTCCTaGAGGCTCCCACGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEFSRMS*RLPRGQ
Trigger: CTGTCCCCGTGGGAGCCTGCAGGACATTCTGGAGAA...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGAGGAGAACGTCGGGCTaGAGAGGACCCGAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGERRTSG*RGPECE
Trigger: TTCACACTCGGGTCCTCTCCAGCCCGACGTTCTCCT...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCAGGCCTTTGCGCGGCATaGTCCGCAGCAGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSGLCAA*SAAAWC
Trigger: ACACCAGGCTGCTGCGGACCATGCCGCGCAAAGGCC...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTATTAGACTCCATTCTTaGGGCTGTGTTGACTGTATC +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFIRLHS*GCVDCI
Trigger: GATACAGTCAACACAGCCTCAAGAATGGAGTCTAAT...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTCTGGGTCCAGGTCCCTaGAGCTCTCCAGCCCATAGT +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGLGPGP*SSPAHS
Trigger: ACTATGGGCTGGAGAGCTTCAGGGACCTGGACCCAG...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTACGAGGAAGAAGCAGTaGTCTTCGTCACCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGTRKKQ*SSSPGR
Trigger: CCGGCCGGGTGACGAAGAGCACTGCTTCTTCCTCGT...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCAGGGGCCAGTTCAGTTTaGGCCCCGACACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSGASSV*APTQPP
Trigger: TGGTGGCTGTGTCGGGGCGCAAACTGAACTGGCCCC...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTAGTTCCTTCTCCAGCTaGATCTTCCTGTATATGAAG +
Preference number: 4 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFSSFSS*IFLYMK
Trigger: CTTCATATACAGGAAGATGCAGCTGGAGAAGGAACT...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGGTTGCCCTTATAATATaGTGTCTTGGCAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWVALII*CLGKDL
Trigger: CAAGTCTTTGCCAAGACAGCATATTATAAGGGCAAC...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTAGGGGTACGAGGTATTaGCCAGCGGCAGTACCACGG +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGRGTRY*PAAVPR
Trigger: CCGTGGTACTGCCGCTGGCCAATACCTCGTACCCCT...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCGTACTCGGGATTATCTaGGTCTTTATATGTAATGAT +
Preference number: 4 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPVLGII*VFICND
Trigger: ATCATTACATATAAAGACCCAGATAATCCCGAGTAC...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTAGCAGGAGCCCGTCGTaGAAGGATGCTGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGSRSPS*KDAGMV
Trigger: CACCATCCCAGCATCCTTCCACGACGGGCTCCTGCT...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTGCCTCTCAAGGCTACTaGGCTCAACGTCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGASQGY*AQRPPS
Trigger: GCTGGGAGGACGTTGAGCCCAGTAGCCTTGAGAGGC...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTGAGAGGACCCGAGTGTaGACAACTGGGAGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGERTRV*TTGSVR
Trigger: ACGCACACTCCCAGTTGTTCACACTCGGGTCCTCTC...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTTCGCGTACTGCTCCATaGGGGACAGCAGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGSRTAP*GTAGCP
Trigger: TGGACAACCTGCTGTCCCGCATGGAGCAGTACGCGA...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACTTCTCCTCCAGGTATaGCTGGGTCCGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSLLLQV*LGPLLH
Trigger: GTGGAGGAGCGGACCCAGGCATACCTGGAGGAGAAG...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTCGGTTCCACATCCGCTaGGTGATGTTCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGRFHIR*VMFSPS
Trigger: TGATGGGGAGAACATCACTCAGCGGATGTGGAACCG...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACTGTGTGGATGCCAATaGGCAAGCGCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSLCGCQ*ASAAAP
Trigger: AGGAGCAGCTGCGCTTGCGCATTGGCATCCACACAG...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCAAACGTCAGGCGGATCTaGTGGAATGGTGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSNVRRI*WNGGLS
Trigger: GGAGAGGCCACCATTCCAGCAGATCCGCCTGACGTT...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGTCCGAACCTTGCCTTTaGCCTTCATTTCTACATCCC +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGESEPCL*PSFLHP
Trigger: GGGATGTAGAAATGAAGGGCAAAGGCAAGGTTCGGA...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCAATCTCCTGAAGGATaGTCCCAAAGCTGTATACGT +
Preference number: 4 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEQSPEG*SQSCIR
Trigger: ACGTATACAGCTTTGGGATCATCCTTCAGGAGATTG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCAGTCTCAGAAGACAAGTaGATCTTCAGGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSVSEDK*IFRASP
Trigger: TGGGGAAGCCCTGAAGATCCACTTGTCTTCTGAGAC...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTCCGTCCACAGCTTTTTaGCATAAACGGTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGPSTAF*HKRCVL
Trigger: AAGGACACACCGTTTATGCCAAAAAGCTGTGGACGG...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTAAAGGTGATCTTGGTTaGATGCTGGGTCTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGKGDLG*MLGLRC
Trigger: ACAACGAAGACCCAGCATGCAACCAAGATCACCTTT...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTGCCAGGTGTTTTAACTaGTTCAGGAATTCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGARCFN*FRNSKY
Trigger: GTACTTGGAATTCCTGAAGCAGTTAAAACACCTGGC...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR GCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCATTTCCCGATCGCCACTaGTATCAATTTTCAGGTATC +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSFPDRH*YQFSGI
Trigger: GATACCTGAAAATTGATAGCAGTGGCGATCGGGAAA...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CCA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTTATAATATGCTGTCTTaGCAAAGACTTGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGYNMLS*QRLGTG
Trigger: GCCAGTTCCAAGTCTTTGCCAAGACAGCATATTATA...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR TCA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCAGCATCTTCCTGTATATaGAGAAGGAGACAATCAGAA +
Preference number: 4 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSASSCI*RRRQSE
Trigger: TTCTGATTGTCTCCTTCTTCATATACAGGAAGATGC...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 90 bp TGGCGTAGCTGGGCCCCGCGCGGGTGGTCAGCGCATACTCGTCCTTaGCACCGAAGCCCAGCGCCGGGGCGCCGGCGGTCAGCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: WRSWAPRGWSAHTRP*HRSPAPGRRRSAAG
Trigger: TCCCGCTGCTGACCGCCGGCGCCCCGGCGCTGGGCTTCGGTGTCAAGGACGAGTATGCGCTGACCACCCGCGCGGGGCCCAGCTACGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp CCAGGGGCGCTGCGGTGTCGGAGCAGACGCCCAGCGCGTTTTCGCTaGTGCCCAGCACCGTGCGGACCGTCCAGCCCGGCAGCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: PGALRCRSRRPARFR*CPAPCGPSSPAASR
Trigger: CCGACTTGCTGCCGGGCTGGACGGTCCGCACGGTGCTGGGCAGCAGCGAAAACGCGCTGGGCGTCTGCTCCGACACCGCAGCGCCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp TGGCCAGCGGCAGTACCACGGCTACCGTCAGGTTGCCCGCGTGGCTaGCCCGGAGCAGCAGCAGCAGCGGCGGCAGCAGCAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: WPAAVPRLPSGCPRG*PGAAAAAAAAAGAG
Trigger: TCCTGCTCCTGCTGCTGCCGCCGCTGCTGCTGCTGCTCCGGGGCAGCCACGCGGGCAACCTGACGGTAGCCGTGGTACTGCCGCTGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp TGTCGGAGCAGACGCCCAGCGCGTTTTCGCTGCTGCCCAGCACCGTaGGGACCGTCCAGCCCGGCAGCAAGTCGGGGCGCGCCTTCACCT +
Preference number: 5 (lower is better)
Translates to: CRSRRPARFRCCPAP*GPSSPAASRGAPSP
Trigger: AGGTGAAGGCGCGCCCCGACTTGCTGCCGGGCTGGACGGTCCGCACGGTGCTGGGCAGCAGCGAAAACGCGCTGGGCGTCTGCTCCGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp GAGCCTCTCCCGCTCAGGGTCAGCCGGCTGCCTGCACTCCGCAGGTaGCTCTCAAGGCTACTGGGCTCAACGTCCTCCCAGCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: EPLPLRVSRLPALRR*LSRLLGSTSSQRTR
Trigger: GCGGGTGCGCTGGGAGGACGTTGAGCCCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGGCAGCCGGCTGACCCTGAGCGGGAGAGGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 90 bp GGGTCAGCCGGCTGCCTGCACTCCGCAGGTGCCTCTCAAGGCTACTaGGCTCAACGTCCTCCCAGCGCACCCGCCACAGCTCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GSAGCLHSAGASQGY*AQRPPSAPATAPRP
Trigger: TGGCCTCGGAGCTGTGGCGGGTGCGCTGGGAGGACGTTGAGCCCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGGCAGCCGGCTGACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 90 bp GGAAGAAGCAGTGCTCTTCGTCACCCGGCCGGTAGGCGTAGAGCATaGGCGCTTGGCGCTCCCAGCCCAGCCGTCGGTGCAGCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GRSSALRHPAGRRRA*ALGAPSPAVGAAPP
Trigger: TGGCGGCGCTGCACCGACGGCTGGGCTGGGAGCGCCAAGCGCTCATGCTCTACGCCTACCGGCCGGGTGACGAAGAGCACTGCTTCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCTCCTCGGTCCCCTaGGGCTCAGCGGCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWASSVP*GSAAGP
Trigger: GGGACCGGCCGCTGAGCCCAAGGGGACCGAGGAGGC...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTACGGCTACCGTCAGGTaGCCCGCGTGGCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFTATVR*PAWLPR
Trigger: CCGGGGCAGCCACGCGGGCAACCTGACGGTAGCCGT...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp GGAGCCGTAATTGGAGCCTCTCCCGCTCAGGGTCAGCCGGCTGCCTaGACTCCGCAGGTGCCTCTCAAGGCTACTGGGCTCAACGTCCTC +
Preference number: 5 (lower is better)
Translates to: GAVIGASPAQGQPAA*TPQVPLKATGLNVL
Trigger: GAGGACGTTGAGCCCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGGCAGCCGGCTGACCCTGAGCGGGAGAGGCTCCAATTACGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCAGCGCATACTCGTCCTaGACACCGAAGCCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPSAYSS*TPKPSA
Trigger: GGCGCTGGGCTTCGGTGTCAAGGACGAGTATGCGCT...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGGTAGAGCATGAGCGCTaGGCGCTCCCAGCCCAGCCG +
Preference number: 5 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWVEHER*ALPAQP
Trigger: CGGCTGGGCTGGGAGCGCCAAGCGCTCATGCTCTAC...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGATGCGGGACAGCAGGTaGTCCAGGATGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQMRDSR*SRMLLL
Trigger: CAGCAGCAACATCCTGGACAACCTGCTGTCCCGCAT...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCCAGGGGTACGAGGTATaGGCCAGCGGCAGTACCACG +
Preference number: 5 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVQGYEV*ASGSTT
Trigger: CGTGGTACTGCCGCTGGCCAATACCTCGTACCCCTG...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGTGGTCCACCGTAATATaGAGGCGGTCGCGGACCCGC +
Preference number: 5 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWWSTVI*RRSRTR
Trigger: GCGGGTCCGCGACCGCCTCAATATTACGGTGGACCA...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCCGCTCGATGATCTCTTaGGGGCTCAGGTCCAAACCT +
Preference number: 5 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPRSMIS*GLRSKP
Trigger: AGGTTTGGACCTGAGCCCCAAAGAGATCATCGAGCG...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCAGGAACACAGCGGGGTaGTGCTCCCACTTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLRNTAG*CSHLRS
Trigger: GGACCTCAAGTGGGAGCACAACCCCGCTGTGTTCCT...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGGCCAGCCCTGTCTTGGCAAAGACTaGGAACTGGCCCTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: CVYCWVEGVGGAGIVGQPCLGKD*ELALCG
Trigger: ACCACAGAGGGCCAGTTCCAAGTCTTTGCCAAGACA...GGGCTGGCCCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GGAGGGGATCAGGAATCCACAGCCCAGCCCGGCCTGAGTCCAGGTGGAGAGCAGCCCTTGACGATGTCATaGGTGAGTGAGTACCGGAAC +
Preference number: 5 (lower is better)
Translates to: GGDQESTAQPGLSPGGEQPLTMS*VSEYRN
Trigger: GTTCCGGTACTCACTCACCAATGACATCGTCAAGGG...CTGCTCTCCACCTGGACTCAGGCCGGGCTGGGCTGTGGATTCCTGATCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 90 bp CTTCCACGTGGAAGACCCCACTCCTCAGGGCAATCTCCTGAAGGATaGTCCCAAAGCTGTATACGTCACCAGCCTGGGAGCCCCGCACAG +
Preference number: 5 (lower is better)
Translates to: LPRGRPHSSGQSPEG*SQSCIRHQPGSPAQ
Trigger: CTGTGCGGGGCTCCCAGGCTGGTGACGTATACAGCTTTGGGATCATCCTTCAGGAGATTGCCCTGAGGAGTGGGGTCTTCCACGTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp TTGCTGCTGTTCTCCCTGTTAAATTTGCGCAACGTCAGGCGGATCTaGTGGAATGGTGGCCTCTCCTGTGGGTCCTCAGCCCAGCACCGC +
Preference number: 5 (lower is better)
Translates to: LLLFSLLNLRNVRRI*WNGGLSCGSSAQHR
Trigger: GCGGTGCTGGGCTGAGGACCCACAGGAGAGGCCACCATTCCAGCAGATCCGCCTGACGTTGCGCAAATTTAACAGGGAGAACAGCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCCACCTTGCAGGCTTaGCCCAAAGATATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVSTLQA*PKDIQV
Trigger: CACCTGGATATCTTTGGGCAAAGCCTGCAAGGTGGA...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCGGTGGAAAGGTGATCTaGGTTGCATGCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVGGKVI*VACWVF
Trigger: GAAGACCCAGCATGCAACCAAGATCACCTTTCCACC...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGCCATCTACCACGCAGTaGGATGACTTGAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWPSTTQ*DDLRFP
Trigger: TGGGAACCTCAAGTCATCCAACTGCGTGGTAGATGG...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCATAAACGGTGTGTCCTaGCTCTGGGTCCAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLINGVS*LWVQVP
Trigger: AGGGACCTGGACCCAGAGCAAGGACACACCGTTTAT...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp CTCCCCATCAGTAACAGTTCCCCCATGTGCCAGAGTCTCCGTCACTaGCTGGATATAGAGCAGGAGCCCGTCGTGGAAGGATGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LPISNSSPMCQSLRH*LDIEQEPVVEGCWD
Trigger: ATCCCAGCATCCTTCCACGACGGGCTCCTGCTCTATATCCAGGCAGTGACGGAGACTCTGGCACATGGGGGAACTGTTACTGATGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTACCAGTTCCTCCAGATaGTTCGCGTACTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFTSSSR*FAYCSM
Trigger: CATGGAGCAGTACGCGAACAATCTGGAGGAACTGGT...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTGTCAAAGCCACATTaGGGGATGTCAGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLLSKPH*GMSGGG
Trigger: CCCTCCTCCTGACATCCCCAAATGTGGCTTTGACAA...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CTGTGCACTGTGTCTACTGCTGGGTGGAGGGGGTCGGGGGAGCAGGTATTGTGGTTCTCCCTGTTAAATTaGCGCAACGTCAGGCGGATC +
Preference number: 5 (lower is better)
Translates to: LCTVSTAGWRGSGEQVLWFSLLN*RNVRRI
Trigger: GATCCGCCTGACGTTGCGCAAATTTAACAGGGAGAA...CCACAATACCTGCTCCCCCGACCCCCTCCACCCAGCAGTAGACACAGTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp AGAACGTCGGGCTGGAGAGGACCCGAGTGTGAACAACTGGGAGTGTaGGTGCGTGTTAGAGAGAGAGAGAGAGAGAGAGAAAGGGTGCGA +
Preference number: 5 (lower is better)
Translates to: RTSGWRGPECEQLGV*VRVRERERERERVR
Trigger: TCGCACCCTTTCTCTCTCTCTCTCTCTCTCTCTAACACGCACGCACACTCCCAGTTGTTCACACTCGGGTCCTCTCCAGCCCGACGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp CATCCGCTGAGTGATGTTCTCCCCATCAGTAACAGTTCCCCCATGTaGCAGAGTCTCCGTCACTGCCTGGATATAGAGCAGGAGCCCGTC +
Preference number: 5 (lower is better)
Translates to: HPLSDVLPISNSSPM*QSLRHCLDIEQEPV
Trigger: GACGGGCTCCTGCTCTATATCCAGGCAGTGACGGAGACTCTGGCACATGGGGGAACTGTTACTGATGGGGAGAACATCACTCAGCGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTGGGTTGTGCTCCCACTaGAGGTCCACCGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGGLCSH*RSTAAR
Trigger: CCTGGCCGCGGTGGACCTCAAGTGGGAGCACAACCC...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CCCAACCCTTCTGCGCCACCCCTCTTCTCCCCTGTGCACTGTGTCTACTGCTGGAGAAACAGCATGCCCTaGACGATGTCATTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: PNPSAPPLFSPVHCVYCWRNSMP*TMSLVS
Trigger: ACTCACCAATGACATCGTCAAGGGCATGCTGTTTCT...CCAGCAGTAGACACAGTGCACAGGGGAGAAGAGGGGTGGCGCAGAAGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTGAACAGATAGCCCCATaGTGTAGAAACAGCATGCCC +
Preference number: 5 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFEQIAP*CRNSMP
Trigger: GGGCATGCTGTTTCTACACAATGGGGCTATCTGTTC...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCAGGTTGTCCAGGATGTaGCTGCTGTTCTCCCTGTTA +
Preference number: 5 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLRLSRM*LLFSLL
Trigger: TAACAGGGAGAACAGCAGCAACATCCTGGACAACCT...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCTTTTGTCCGAACCTTGCCTTaGCCCTTCATTTCTACATCC +
Preference number: 5 (lower is better)
Translates to: VGQPQMWAPLPSLHLVSFVRTLP*PFISTS
Trigger: GGATGTAGAAATGAAGGGCAAAGGCAAGGTTCGGAC...AAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTCATTCTTGAGGCTGTGTaGACTGTATCCCCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: YCGPAPDVGSPALSSPSLILEAV*TVSPKR
Trigger: TCTCTTTGGGGATACAGTCAACACAGCCTCAAGAAT...GAGACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCAAGGGGCCAGTTCAGTTaGCGCCCCGACACAGCCACC +
Preference number: 5 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSRGQFS*RPDTAT
Trigger: GGTGGCTGTGTCGGGGCGCAAACTGAACTGGCCCCT...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCAAGTGTACAGGTCATaGAGCAGGGTCACCACCTGC +
Preference number: 5 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEQVYRS*SRVTTC
Trigger: GCAGGTGGTGACCCTGCTCAATGACCTGTACACTTG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp GGTATTGTGGGCCAGCCCCAGATGTGGGCTCCCCTGCCCTCTCTTCACCTAGTCTTGTACACATCAAAGTaGTCTATGACAGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: GIVGQPQMWAPLPSLHLVLYTSK*SMTASK
Trigger: CTTTGATGCTGTCATAGACAACTTTGATGTGTACAA...GACTAGGTGAAGAGAGGGCAGGGGAGCCCACATCTGGGGCTGGCCCACAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTTCCTCCAGGACAGCCTaGGTCTCAGAAGACAAGTGG +
Preference number: 5 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGSSRTA*VSEDKW
Trigger: CCACTTGTCTTCTGAGACCAAGGCTGTCCTGGAGGA...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp CGGGATCCATATCCCAGAGGGAGAAGTCTGTTTCCCGATCGCCACTaGTATCAATTTTCAGGTATCCTGTCACACCTTGAAAGCTTCGGT +
Preference number: 5 (lower is better)
Translates to: RDPYPRGRSLFPDRH*YQFSGILSHLESFG
Trigger: ACCGAAGCTTTCAAGGTGTGACAGGATACCTGAAAATTGATAGCAGTGGCGATCGGGAAACAGACTTCTCCCTCTGGGATATGGATCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 90 bp TACTATTTAAACGATGCCCATTCCAAAGCAGGGGATCCAATGGGATaGCTTCTCCAAGTCCTGTCCAGGCTGTGGGACTTTATCCTCCTC +
Preference number: 5 (lower is better)
Translates to: YYLNDAHSKAGDPMG*LLQVLSRLWDFILL
Trigger: GAGGAGGATAAAGTCCCACAGCCTGGACAGGACTTGGAGAAGGCATCCCATTGGATCCCCTGCTTTGGAATGGGCATCGTTTAAATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413826.1
CDS-3UTR CAA 90 bp TCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACAGGGTCACAGCCACCAGCTCTaGGGAAGTCCCATTGTAGTT +
Preference number: 5 (lower is better)
Translates to: SFHVPLQVTLSPPSKSQGHSHQL*GSPIVV
Trigger: AACTACAATGGGACTTCCCAAGAGCTGGTGGCTGTG...ACCCTGTGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCACATGCTGGGTCTTCGTaGTCAAAGCCACATTTGGGG +
Preference number: 5 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSHAGSS*SKPHLG
Trigger: CCCCAAATGTGGCTTTGACAACGAAGACCCAGCATG...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CCTGAGCTATTCAAATTACTTCCATCCTTTGGCGATGGGGCTGCTGTGGGTGAGCCAATTGTCTCCACCTaGTACACATCAAAGTTGTCT +
Preference number: 5 (lower is better)
Translates to: PELFKLLPSFGDGAAVGEPIVST*YTSKLS
Trigger: AGACAACTTTGATGTGTACAAGGTGGAGACAATTGG...CTCACCCACAGCAGCCCCATCGCCAAAGGATGGAAGTAATTTGAATAGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCATGTAGGCATCGCCAATaGTCTCCACCTTGTACACAT +
Preference number: 5 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSCRHRQ*SPPCTH
Trigger: ATGTGTACAAGGTGGAGACAATTGGCGATGCCTACA...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS-3UTR CAA 90 bp CTAGTCTCTTTTCATGTTCCCCTTCAGGTGACTCTTTCTCCTCCCAGTAAGTCAGTATCCTGTCACACCTaGAAAGCTTCGGTTCCACAT +
Preference number: 5 (lower is better)
Translates to: LVSFHVPLQVTLSPPSKSVSCHT*KASVPH
Trigger: ATGTGGAACCGAAGCTTTCAAGGTGTGACAGGATAC...TGACTTACTGGGAGGAGAAAGAGTCACCTGAAGGGGAACATGAAAAGAGACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 72 bp CGCCGGCGGTCAGCAGCGGGACCCGCCAGTGCGCGGTaGAGCGCCCCACTGGGGCGGCGGCGTACACGCAGC +
Preference number: 6 (lower is better)
Translates to: RRRSAAGPASAR*SAPLGRRRTRS
Trigger: GCTGCGTGTACGCCGCCGCCCCAGTGGGGCGCTTCACCGCGCACTGGCGGGTCCCGCTGCTGACCGCCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp CAGCGGGACCCGCCAGTGCGCGGTGAAGCGCCCCACTaGGGCGGCGGCGTACACGCAGCCGGGGCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: QRDPPVRGEAPH*GGGVHAAGAQE
Trigger: TTCCTGGGCCCCGGCTGCGTGTACGCCGCCGCCCCAGTGGGGCGCTTCACCGCGCACTGGCGGGTCCCGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 72 bp CTGGGCCCCGCGCGGGTGGTCAGCGCATACTCGTCCTaGACACCGAAGCCCAGCGCCGGGGCGCCGGCGGTC +
Preference number: 6 (lower is better)
Translates to: LGPARVVSAYSS*TPKPSAGAPAV
Trigger: GACCGCCGGCGCCCCGGCGCTGGGCTTCGGTGTCAAGGACGAGTATGCGCTGACCACCCGCGCGGGGCCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 72 bp TGGGCCCCGCGCGGGTGGTCAGCGCATACTCGTCCTTaGCACCGAAGCCCAGCGCCGGGGCGCCGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: WAPRGWSAHTRP*HRSPAPGRRRS
Trigger: TGACCGCCGGCGCCCCGGCGCTGGGCTTCGGTGTCAAGGACGAGTATGCGCTGACCACCCGCGCGGGGCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp GCCGTCGGTGCAGCGCCGCCACGAAGTCCCCCAGCTTaGCGTAGCTGGGCCCCGCGCGGGTGGTCAGCGCAT +
Preference number: 6 (lower is better)
Translates to: AVGAAPPRSPPA*RSWAPRGWSAH
Trigger: ATGCGCTGACCACCCGCGCGGGGCCCAGCTACGCCAAGCTGGGGGACTTCGTGGCGGCGCTGCACCGACGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp AGACGCCCAGCGCGTTTTCGCTGCTGCCCAGCACCGTaGGGACCGTCCAGCCCGGCAGCAAGTCGGGGCGCG +
Preference number: 6 (lower is better)
Translates to: RRPARFRCCPAP*GPSSPAASRGA
Trigger: CGCGCCCCGACTTGCTGCCGGGCTGGACGGTCCGCACGGTGCTGGGCAGCAGCGAAAACGCGCTGGGCGTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp CTCAGCGGGCACCGCAGCAGGCGAGCGCTCCTACCATaGCCTCCTCGGTCCCCTTGGGCTCAGCGGCCGGTC +
Preference number: 6 (lower is better)
Translates to: LSGHRSRRALLP*PPRSPWAQRPV
Trigger: GACCGGCCGCTGAGCCCAAGGGGACCGAGGAGGCCATGGTAGGAGCGCTCGCCTGCTGCGGTGCCCGCTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp GCAGTACCACGGCTACCGTCAGGTTGCCCGCGTGGCTaGCCCGGAGCAGCAGCAGCAGCGGCGGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: AVPRLPSGCPRG*PGAAAAAAAAA
Trigger: TGCTGCTGCCGCCGCTGCTGCTGCTGCTCCGGGGCAGCCACGCGGGCAACCTGACGGTAGCCGTGGTACTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp CGGTGTCGGAGCAGACGCCCAGCGCGTTTTCGCTGCTaGCCAGCACCGTGCGGACCGTCCAGCCCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: RCRSRRPARFRC*PAPCGPSSPAA
Trigger: TGCTGCCGGGCTGGACGGTCCGCACGGTGCTGGGCAGCAGCGAAAACGCGCTGGGCGTCTGCTCCGACACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp CTGCGGTGTCGGAGCAGACGCCCAGCGCGTTTTCGCTaGTGCCCAGCACCGTGCGGACCGTCCAGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: LRCRSRRPARFR*CPAPCGPSSPA
Trigger: TGCCGGGCTGGACGGTCCGCACGGTGCTGGGCAGCAGCGAAAACGCGCTGGGCGTCTGCTCCGACACCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp GCAGCGCCGCCACGAAGTCCCCCAGCTTGGCGTAGCTaGGCCCCGCGCGGGTGGTCAGCGCATACTCGTCCT +
Preference number: 6 (lower is better)
Translates to: AAPPRSPPAWRS*APRGWSAHTRP
Trigger: AGGACGAGTATGCGCTGACCACCCGCGCGGGGCCCAGCTACGCCAAGCTGGGGGACTTCGTGGCGGCGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 72 bp TTCGTCACCCGGCCGGTAGGCGTAGAGCATGAGCGCTaGGCGCTCCCAGCCCAGCCGTCGGTGCAGCGCCGC +
Preference number: 6 (lower is better)
Translates to: FVTRPVGVEHER*ALPAQPSVQRR
Trigger: GCGGCGCTGCACCGACGGCTGGGCTGGGAGCGCCAAGCGCTCATGCTCTACGCCTACCGGCCGGGTGACGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 90 bp TCCACGGCGGGTCCCACGCGCGCCCACGACCAGGGGTACGAGGTATaGGCCAGCGGCAGTACCACGGCTACCGTCAGGTTGCCCGCGTGG +
Preference number: 6 (lower is better)
Translates to: STAGPTRAHDQGYEV*ASGSTTATVRLPAW
Trigger: CCACGCGGGCAACCTGACGGTAGCCGTGGTACTGCCGCTGGCCAATACCTCGTACCCCTGGTCGTGGGCGCGCGTGGGACCCGCCGTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 90 bp GCAGTGCTCTTCGTCACCCGGCCGGTAGGCGTAGAGCATGAGCGCTaGGCGCTCCCAGCCCAGCCGTCGGTGCAGCGCCGCCACGAAGTC +
Preference number: 6 (lower is better)
Translates to: AVLFVTRPVGVEHER*ALPAQPSVQRRHEV
Trigger: GACTTCGTGGCGGCGCTGCACCGACGGCTGGGCTGGGAGCGCCAAGCGCTCATGCTCTACGCCTACCGGCCGGGTGACGAAGAGCACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp TATTGGCCAGCGGCAGTACCACGGCTACCGTCAGGTTaGCCGCGTGGCTGCCCCGGAGCAGCAGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: YWPAAVPRLPSG*PRGCPGAAAAA
Trigger: CGCTGCTGCTGCTGCTCCGGGGCAGCCACGCGGGCAACCTGACGGTAGCCGTGGTACTGCCGCTGGCCAATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 72 bp AGTGCTCTTCGTCACCCGGCCGGTAGGCGTAGAGCATaGGCGCTTGGCGCTCCCAGCCCAGCCGTCGGTGCA +
Preference number: 6 (lower is better)
Translates to: SALRHPAGRRRA*ALGAPSPAVGA
Trigger: TGCACCGACGGCTGGGCTGGGAGCGCCAAGCGCTCATGCTCTACGCCTACCGGCCGGGTGACGAAGAGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 72 bp TGCGCGGCATGGTCCGCAGCAGCCTGGTGTAGTGGCTaGGGTCGTCCTCGGCGAACTCCAGGTGGTCCACCG +
Preference number: 6 (lower is better)
Translates to: CAAWSAAAWCSG*GRPRRTPGGPP
Trigger: CGGTGGACCACCTGGAGTTCGCCGAGGACGACCTCAGCCACTACACCAGGCTGCTGCGGACCATGCCGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp CCGCTCAGGGTCAGCCGGCTGCCTGCACTCCGCAGGTaGCTCTCAAGGCTACTGGGCTCAACGTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: PLRVSRLPALRR*LSRLLGSTSSQ
Trigger: CTGGGAGGACGTTGAGCCCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGGCAGCCGGCTGACCCTGAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp GTCCCACGCGCGCCCACGACCAGGGGTACGAGGTATTaGCCAGCGGCAGTACCACGGCTACCGTCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: VPRAPTTRGTRY*PAAVPRLPSGC
Trigger: GCAACCTGACGGTAGCCGTGGTACTGCCGCTGGCCAATACCTCGTACCCCTGGTCGTGGGCGCGCGTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp GGCTGCCTGCACTCCGCAGGTGCCTCTCAAGGCTACTaGGCTCAACGTCCTCCCAGCGCACCCGCCACAGCT +
Preference number: 6 (lower is better)
Translates to: GCLHSAGASQGY*AQRPPSAPATA
Trigger: AGCTGTGGCGGGTGCGCTGGGAGGACGTTGAGCCCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 72 bp GGTCCCACGCGCGCCCACGACCAGGGGTACGAGGTATaGGCCAGCGGCAGTACCACGGCTACCGTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: GPTRAHDQGYEV*ASGSTTATVRL
Trigger: CAACCTGACGGTAGCCGTGGTACTGCCGCTGGCCAATACCTCGTACCCCTGGTCGTGGGCGCGCGTGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp ATTGGAGCCTCTCCCGCTCAGGGTCAGCCGGCTGCCTaGACTCCGCAGGTGCCTCTCAAGGCTACTGGGCTC +
Preference number: 6 (lower is better)
Translates to: IGASPAQGQPAA*TPQVPLKATGL
Trigger: GAGCCCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGGCAGCCGGCTGACCCTGAGCGGGAGAGGCTCCAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp GCCGCGGAGCAGGTGGGTGCCAGGAGAACGTCGGGCTaGAGAGGACCCGAGTGTGAACAACTGGGAGTGTGC +
Preference number: 6 (lower is better)
Translates to: AAEQVGARRTSG*RGPECEQLGVC
Trigger: GCACACTCCCAGTTGTTCACACTCGGGTCCTCTCCAGCCCGACGTTCTCCTGGCACCCACCTGCTCCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp CGTCAGGCGGATCTGCTGGAATGGTGGCCTCTCCTGTaGGTCCTCAGCCCAGCACCGCTGCATGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: RQADLLEWWPLL*VLSPAPLHEQP
Trigger: GGGCTGCTCATGCAGCGGTGCTGGGCTGAGGACCCACAGGAGAGGCCACCATTCCAGCAGATCCGCCTGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp CGTAATTGGAGCCTCTCCCGCTCAGGGTCAGCCGGCTaGCTGCACTCCGCAGGTGCCTCTCAAGGCTACTGG +
Preference number: 6 (lower is better)
Translates to: RNWSLSRSGSAG*LHSAGASQGYW
Trigger: CCAGTAGCCTTGAGAGGCACCTGCGGAGTGCAGGCAGCCGGCTGACCCTGAGCGGGAGAGGCTCCAATTACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp ATGCCAATGCGCAAGCGCAGCTGCTCCTGGGGCCGGTaGCGGATTCGGAAGGAGCGCACAGCATCCAGCAGT +
Preference number: 6 (lower is better)
Translates to: MPMRKRSCSWGR*RIRKERTASSS
Trigger: ACTGCTGGATGCTGTGCGCTCCTTCCGAATCCGCCACCGGCCCCAGGAGCAGCTGCGCTTGCGCATTGGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368677.2
ENST00000368680.4
CDS CAA 72 bp TCGTCCTCGGCGAACTCCAGGTGGTCCACCGTAATATaGAGGCGGTCGCGGACCCGCATGAACAGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSANSRWSTVI*RRSRTRMNSPS
Trigger: GGAGGGGCTGTTCATGCGGGTCCGCGACCGCCTCAATATTACGGTGGACCACCTGGAGTTCGCCGAGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 90 bp TGGCTGAGGTCGTCCTCGGCGAACTCCAGGTGGTCCACCGTAATATaGAGGCGGTCGCGGACCCGCATGAACAGCCCCTCCACGAGGAAG +
Preference number: 6 (lower is better)
Translates to: WLRSSSANSRWSTVI*RRSRTRMNSPSTRK
Trigger: CTTCCTCGTGGAGGGGCTGTTCATGCGGGTCCGCGACCGCCTCAATATTACGGTGGACCACCTGGAGTTCGCCGAGGACGACCTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp TCCCAGGGCCTGCGGGGAGCAGGGCCCTGTCCACCTTaGAGGCTTTGCCCAAAGATATCCAGGTGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: SQGLRGAGPCPP*RLCPKISRWKK
Trigger: TTTCTTCCACCTGGATATCTTTGGGCAAAGCCTGCAAGGTGGACAGGGCCCTGCTCCCCGCAGGCCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 72 bp GGCCGTCCACAGCTTTTTGGCATAAACGGTGTGTCCTaGCTCTGGGTCCAGGTCCCTGAAGCTCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GRPQLFGINGVS*LWVQVPEALQP
Trigger: GGGCTGGAGAGCTTCAGGGACCTGGACCCAGAGCAAGGACACACCGTTTATGCCAAAAAGCTGTGGACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 72 bp GAGAGAGAGAGAGAAAGGGTGCGAGTGAGCGCTTCGTaGAGAAGGATGAGAGAGGGCGCGCGAGGGAGGAAA +
Preference number: 6 (lower is better)
Translates to: ERERERVRVSAS*RRMREGARGRK
Trigger: TTTCCTCCCTCGCGCGCCCTCTCTCATCCTTCTTCACGAAGCGCTCACTCGCACCCTTTCTCTCTCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp TGCCTGGATATAGAGCAGGAGCCCGTCGTGGAAGGATaGTGGGATGGTGTTCACCAGGCCATCCTCCATGGT +
Preference number: 6 (lower is better)
Translates to: CLDIEQEPVVEG*WDGVHQAILHG
Trigger: ACCATGGAGGATGGCCTGGTGAACACCATCCCAGCATCCTTCCACGACGGGCTCCTGCTCTATATCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp TCCCTGTTAAATTTGCGCAACGTCAGGCGGATCTGCTaGAATGGTGGCCTCTCCTGTGGGTCCTCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: SLLNLRNVRRIC*NGGLSCGSSAQ
Trigger: CTGGGCTGAGGACCCACAGGAGAGGCCACCATTCCAGCAGATCCGCCTGACGTTGCGCAAATTTAACAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp TATAGAGCAGGAGCCCGTCGTGGAAGGATGCTGGGATaGTGTTCACCTGTAGGGGCAAACAGAGGTCGGCTG +
Preference number: 6 (lower is better)
Translates to: YRAGARRGRMLG*CSPVGANRGRL
Trigger: CAGCCGACCTCTGTTTGCCCCTACAGGTGAACACCATCCCAGCATCCTTCCACGACGGGCTCCTGCTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413826.1
CDS CAA 72 bp CCTGCGGGGAGCAGGGCCCTGTCCACCTTGCAGGCTTaGCCCAAAGATATCCAGGTGGAAGAAAACGTAGTC +
Preference number: 6 (lower is better)
Translates to: PAGSRALSTLQA*PKDIQVEENVV
Trigger: GACTACGTTTTCTTCCACCTGGATATCTTTGGGCAAAGCCTGCAAGGTGGACAGGGCCCTGCTCCCCGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS TCA 72 bp GGAAGACCCCACTCCTCAGGGCAATCTCCTGAAGGATaGTCCCAAAGCTGTATACGTCACCAGCCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: GRPHSSGQSPEG*SQSCIRHQPGS
Trigger: GCTCCCAGGCTGGTGACGTATACAGCTTTGGGATCATCCTTCAGGAGATTGCCCTGAGGAGTGGGGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp AGTAACAGTTCCCCCATGTGCCAGAGTCTCCGTCACTaGCTGGATATAGAGCAGGAGCCCGTCGTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: SNSSPMCQSLRH*LDIEQEPVVEG
Trigger: TCCTTCCACGACGGGCTCCTGCTCTATATCCAGGCAGTGACGGAGACTCTGGCACATGGGGGAACTGTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp TTCTCCCTGTTAAATTTGCGCAACGTCAGGCGGATCTaGTGGAATGGTGGCCTCTCCTGTGGGTCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: FSLLNLRNVRRI*WNGGLSCGSSA
Trigger: GGCTGAGGACCCACAGGAGAGGCCACCATTCCAGCAGATCCGCCTGACGTTGCGCAAATTTAACAGGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp CTGGATATAGAGCAGGAGCCCGTCGTGGAAGGATGCTaGGATGGTGTTCACCAGGCCATCCTCCATGGTGAA +
Preference number: 6 (lower is better)
Translates to: LDIEQEPVVEGC*DGVHQAILHGE
Trigger: TTCACCATGGAGGATGGCCTGGTGAACACCATCCCAGCATCCTTCCACGACGGGCTCCTGCTCTATATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp ATGCTGTCTTGGCAAAGACTTGGAACTGGCCCTCTGTaGTTAGCAGGGAGCCGTAATTGGAGCCTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: MLSWQRLGTGPL*LAGSRNWSLSR
Trigger: GCGGGAGAGGCTCCAATTACGGCTCCCTGCTAACCACAGAGGGCCAGTTCCAAGTCTTTGCCAAGACAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp GGAGAGGACCCGAGTGTGAACAACTGGGAGTGTGCGTaGGTGTTAGAGAGAGAGAGAGAGAGAGAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: GEDPSVNNWECA*VLEREREREKG
Trigger: CCCTTTCTCTCTCTCTCTCTCTCTCTCTAACACGCACGCACACTCCCAGTTGTTCACACTCGGGTCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp GGCTGGAGAGGACCCGAGTGTGAACAACTGGGAGTGTaGGTGCGTGTTAGAGAGAGAGAGAGAGAGAGAGAA +
Preference number: 6 (lower is better)
Translates to: GWRGPECEQLGV*VRVRERERERE
Trigger: TTCTCTCTCTCTCTCTCTCTCTCTAACACGCACGCACACTCCCAGTTGTTCACACTCGGGTCCTCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp CCAGCTCGAAACCACCAAACTCCTCCAGGACAGCCTTaGTCTCAGAAGACAAGTGGATCTTCAGGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: PARNHQTPPGQP*SQKTSGSSGLP
Trigger: GGGAAGCCCTGAAGATCCACTTGTCTTCTGAGACCAAGGCTGTCCTGGAGGAGTTTGGTGGTTTCGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368677.2
ENST00000368680.4
CDS CCA 72 bp CCAATGGGATGCCTTCTCCAAGTCCTGTCCAGGCTGTaGGACTTTATCCTCCTCCCGCCTCAAGCCCATTTT +
Preference number: 6 (lower is better)
Translates to: PMGCLLQVLSRL*DFILLPPQAHF
Trigger: AAAATGGGCTTGAGGCGGGAGGAGGATAAAGTCCCACAGCCTGGACAGGACTTGGAGAAGGCATCCCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413826.1
CDS GCA 72 bp AACGATGCCCATTCCAAAGCAGGGGATCCAATGGGATaGCTTCTCCAAGTCCTGTCCAGGCTGTGGGACTTT +
Preference number: 6 (lower is better)
Translates to: NDAHSKAGDPMG*LLQVLSRLWDF
Trigger: AAAGTCCCACAGCCTGGACAGGACTTGGAGAAGGCATCCCATTGGATCCCCTGCTTTGGAATGGGCATCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413826.1
CDS CAA 72 bp TCCAGCTCGAAACCACCAAACTCCTCCAGGACAGCCTaGGTCTCAGAAGACAAGTGGATCTTCAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: SSSKPPNSSRTA*VSEDKWIFRAS
Trigger: GGAAGCCCTGAAGATCCACTTGTCTTCTGAGACCAAGGCTGTCCTGGAGGAGTTTGGTGGTTTCGAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368677.2
ENST00000368680.4
CDS CAA 72 bp GATGAGAGCCTTAGGGATGGGAGTGGCATTGGCTGCTaGAGAAGGGTAACTCCCTCTAGGACCCCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: DESLRDGSGIGC*RRVTPSRTPKG
Trigger: ACCTTTTGGGGTCCTAGAGGGAGTTACCCTTCTCAAGCAGCCAATGCCACTCCCATCCCTAAGGCTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368677.2
CDS CAA 72 bp CCAGTTCAGTTTGCGCCCCGACACAGCCACCAGCTCTaGGGAAGTCCCATTGTAGTTCAGTACAACCCTGAA +
Preference number: 6 (lower is better)
Translates to: PVQFAPRHSHQL*GSPIVVQYNPE
Trigger: TTCAGGGTTGTACTGAACTACAATGGGACTTCCCAAGAGCTGGTGGCTGTGTCGGGGCGCAAACTGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp TCAGATGAGAGCCTTAGGGATGGGAGTGGCATTGGCTaGTTGAGAAGGGTAACTCCCTCTAGGACCCCAAAA +
Preference number: 6 (lower is better)
Translates to: SDESLRDGSGIG*LRRVTPSRTPK
Trigger: TTTTGGGGTCCTAGAGGGAGTTACCCTTCTCAAGCAGCCAATGCCACTCCCATCCCTAAGGCTCTCATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368677.2
CDS CAA 90 bp AGTTCCTCCAGATTGTTCGCGTACTGCTCCATGCGGGACAGCAGGTaGTCCAGGATGTTGCTGCTGTTCTCCCTGTTAAATTTGCGCAAC +
Preference number: 6 (lower is better)
Translates to: SSSRLFAYCSMRDSR*SRMLLLFSLLNLRN
Trigger: GTTGCGCAAATTTAACAGGGAGAACAGCAGCAACATCCTGGACAACCTGCTGTCCCGCATGGAGCAGTACGCGAACAATCTGGAGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp GTGCAGGCTCCCACAAACCTGGTCAGGTGTTCATTCTaGACATCCCGCATATGCTTCAGTTCAAACAGGACT +
Preference number: 6 (lower is better)
Translates to: VQAPTNLVRCSF*TSRICFSSNRT
Trigger: AGTCCTGTTTGAACTGAAGCATATGCGGGATGTGCAGAATGAACACCTGACCAGGTTTGTGGGAGCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CAA 72 bp AGATTGTTCGCGTACTGCTCCATGCGGGACAGCAGGTaGTCCAGGATGTTGCTGCTGTTCTCCCTGTTAAAT +
Preference number: 6 (lower is better)
Translates to: RLFAYCSMRDSR*SRMLLLFSLLN
Trigger: ATTTAACAGGGAGAACAGCAGCAACATCCTGGACAACCTGCTGTCCCGCATGGAGCAGTACGCGAACAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp AACTCCTCCAGGACAGCCTTGGTCTCAGAAGACAAGTaGATCTTCAGGGCTTCCCCATTAGACTCCATTCTT +
Preference number: 6 (lower is better)
Translates to: NSSRTALVSEDK*IFRASPLDSIL
Trigger: AAGAATGGAGTCTAATGGGGAAGCCCTGAAGATCCACTTGTCTTCTGAGACCAAGGCTGTCCTGGAGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368677.2
ENST00000368680.4
CDS CCA 72 bp TCACAGCCACGAGGTTGCCCTTATAATATGCTGTCTTaGCAAAGACTTGGAACTGGCCCTCTGTGGTTAGCA +
Preference number: 6 (lower is better)
Translates to: SQPRGCPYNMLS*QRLGTGPLWLA
Trigger: TGCTAACCACAGAGGGCCAGTTCCAAGTCTTTGCCAAGACAGCATATTATAAGGGCAACCTCGTGGCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS CCA 72 bp CCATCTACCACGCAGTTGGATGACTTGAGGTTCCCATaGGAACAGATAGCCCCATTGTGTAGAAACAGCATG +
Preference number: 6 (lower is better)
Translates to: PSTTQLDDLRFP*EQIAPLCRNSM
Trigger: CATGCTGTTTCTACACAATGGGGCTATCTGTTCCCATGGGAACCTCAAGTCATCCAACTGCGTGGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4
CDS GCA 72 bp TATCCCAGAGGGAGAAGTCTGTTTCCCGATCGCCACTaGTATCAATTTTCAGGTATCCTGTCACACCTTGAA +
Preference number: 6 (lower is better)
Translates to: YPRGRSLFPDRH*YQFSGILSHLE
Trigger: TTCAAGGTGTGACAGGATACCTGAAAATTGATAGCAGTGGCGATCGGGAAACAGACTTCTCCCTCTGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368680.4