Pregenerated sensors for NOXRED1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165555Ensembl transcript IDs: ENST00000380835.6, ENST00000555603.1, ENST00000555901.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGGGATGGGGCCAAGCTaGAGCAGTGTGCCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CGKHNTATRLPQSIVIIRGMGPS*SSVPAS Trigger: GCTGGCTGGCACACTGCTGCAGCTTGGCCCCATCCC...CCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAAAGTGTGCCAGCCAGCTaGTTCCCAAGGTGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: KHNTATRLPQSIVIIRAQSVPAS*FPRWPP Trigger: AGGTGGCCACCTTGGGAAGCAGCTGGCTGGCACACT...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAACAAGCTGCAGCAGTGTaGCAGCCAGCTGCTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KHNTATRLPQSIVIIRAQQAAAV*QPAASQ Trigger: TTGGGAAGCAGCTGGCTGGCACACTGCTGCAGCTTG...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAAGCTGCTTCCCAAGGTaGCCACCTCCAATGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSCGKHNTATRLPQSIVISCFPR*PPPMMP Trigger: GGGCATCATTGGAGGTGGCCACCTTGGGAAGCAGCT...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | ATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCTCACCCAGAGTCTCTaGCCTCCGAGTGGAGATCCG | + |
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Preference number: 4 (lower is better) Translates to: IMWQTQYSHKTPTVNCDNLTQSL*PPSGDP Trigger: CGGATCTCCACTCGGAGGCCAGAGACTCTGGGTGAG...ATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAAGTTCACTCAGAAGCTaGAGCACTTGGGAGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSCGKHNTATRLPQSIVISSLRS*STWEWA Trigger: GGCCCACTCCCAAGTGCTGCAGCTTCTGAGTGAACT...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | ATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATTCTCTGGCCTCCGAGTaGAGATCCGCAGGCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: IMWQTQYSHKTPTVNCDNSLASE*RSAGFQ Trigger: CTGAAAGCCTGCGGATCTCCACTCGGAGGCCAGAGA...ATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | ATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCCCCGAGAACGGCCCTaGAAATACAGCCAGATACGA | + |
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Preference number: 4 (lower is better) Translates to: IMWQTQYSHKTPTVNCDNPRERP*KYSQIR Trigger: TCGTATCTGGCTGTATTTGCAGGGCCGTTCTCGGGG...ATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | CTGATGTCTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATAGGGACTCAAGGTCCTaGAGCATGTCCATTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LMSIMWQTQYSHKTPTVNRDSRS*SMSISK Trigger: CTTGGAAATGGACATGCTCCAGGACCTTGAGTCCCT...ATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | CTGATGTCTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTTGATTCCCAGCTTCTaGAGCTCACCCAGAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LMSIMWQTQYSHKTPTVNLIPSF*SSPRVS Trigger: AGAGACTCTGGGTGAGCTCCAGAAGCTGGGAATCAA...ATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAAGCCTGGGTAGTGGGATaGCAGCTACAAAGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: KHNTATRLPQSIVIIRAQAWVVG*QLQSCT Trigger: TGTACAGCTTTGTAGCTGCCATCCCACTACCCAGGC...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAATGCAGCACTTGGGAGTaGGCCATGTTTCTTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KHNTATRLPQSIVIIRAQCSTWE*AMFLAV Trigger: CACAGCAAGAAACATGGCCCACTCCCAAGTGCTGCA...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | TGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGAGAAGCTGCAGCACTTaGGAGTGGGCCATGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: CGKHNTATRLPQSIVIIRRSCST*EWAMFL Trigger: AAGAAACATGGCCCACTCCCAAGTGCTGCAGCTTCT...CCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR TCA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAGAGAACAGGACTACTTaGGAGATGCTGGCTAAACGG | + |
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Preference number: 4 (lower is better) Translates to: LSCGKHNTATRLPQSIVIENRTT*EMLAKR Trigger: CCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTC...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | ATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATACCCCATACTCAAACTaGAGGGACTCAAGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IMWQTQYSHKTPTVNCDNTPYSN*RDSRSW Trigger: CCAGGACCTTGAGTCCCTGCAGTTTGAGTATGGGGT...ATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATACAAAGCTGTACACAATaGTGGCCTTCTCAAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSCGKHNTATRLPQSIVIQSCTQ*WPSQGW Trigger: CCAGCCTTGAGAAGGCCAGCATTGTGTACAGCTTTG...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAACAGAAGAAGGTTGCATaGGCACAAGCCTCGATCATC | + |
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Preference number: 4 (lower is better) Translates to: KHNTATRLPQSIVIIRAQQKKVA*AQASII Trigger: GATGATCGAGGCTTGTGCCCATGCAACCTTCTTCTG...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | TGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGAGAATCGTAGGATCTTaGAGAGCAGCTATGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: CGKHNTATRLPQSIVIIRRIVGS*RAAMTP Trigger: GGGAGTCATAGCTGCTCTCCAAGATCCTACGATTCT...CCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR TCA 90 bp | CTGATGTCTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATGAAAGCCTGTGGAAATaGCTGGCTGTTCTTTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LMSIMWQTQYSHKTPTVNESLWK*LAVLWL Trigger: TAACCAAAGAACAGCCAGTCATTTCCACAGGCTTTC...ATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAATTTGCAGAAGAAGGTTaGATGGGCACAAGCCTCGAT | + |
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Preference number: 4 (lower is better) Translates to: KHNTATRLPQSIVIIRAQFAEEG*MGTSLD Trigger: ATCGAGGCTTGTGCCCATGCAACCTTCTTCTGCAAA...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | TGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGGAGTTTCCTTGAGTTaGACAGCAGTCAGATCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CGKHNTATRLPQSIVIIRGVSLS*TAVRSN Trigger: GTTTGATCTGACTGCTGTGCAACTCAAGGAAACTCC...CCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAGGACTACTTGAGAGATaGTGGCTAAACGGAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSCGKHNTATRLPQSIVIGLLER*WLNGVS Trigger: GGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCC...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | ATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATACAGTAGTTTCAGCCTaGGTAGTGGGATGGCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: IMWQTQYSHKTPTVNCDNTVVSA*VVGWQL Trigger: TAGCTGCCATCCCACTACCCAGGCTGAAACTACTGT...ATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR TCA 90 bp | CTGATGTCTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATATTAAGGGAGCCAATTaGGAGATGTCTGGAACTTTG | + |
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Preference number: 4 (lower is better) Translates to: LMSIMWQTQYSHKTPTVNIKGAN*EMSGTL Trigger: CAAAGTTCCAGACATCTCTCAATTGGCTCCCTTAAT...ATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR TCA 90 bp | TACAGTTTTATAATTCCTGATGTCTATCATGTGGCAAACACAATACAGCCACAACAGATATTAGGCAGCTaGGACGGCAAGCAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: YSFIIPDVYHVANTIQPQQILGS*DGKQQR Trigger: CCTCTGCTGCTTGCCGTCTCAGCTGCCTAATATCTG...TTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAGGAATTATAAAACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAGAGGCCGCAAGATATTaGTGTGGTTCAACAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: LSCGKHNTATRLPQSIVIEAARY*CGSTVV Trigger: AACTACTGTTGAACCACACCAATATCTTGCGGCCTC...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | TGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGTTCTCTTATTGGGATaGAAAGCCTGTGGAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: CGKHNTATRLPQSIVIIRVLLLG*KACGND Trigger: GTCATTTCCACAGGCTTTCCATCCCAATAAGAGAAC...CCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | ATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATGATACGATCTTCCTCTaGAACCCCATACTCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: IMWQTQYSHKTPTVNCDNDTIFL*NPILKL Trigger: CAGTTTGAGTATGGGGTTCCAGAGGAAGATCGTATC...ATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAATATAGATGGGTAAGGTaGTCTTGGAGAACAGGACTA | + |
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Preference number: 4 (lower is better) Translates to: KHNTATRLPQSIVIIRAQYRWVR*SWRTGL Trigger: TAGTCCTGTTCTCCAAGACCACCTTACCCATCTATA...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | TTACTTAAGTTAGGTTGTGTAGTTTCACTAGTTGCTTCTGAGAGCCAGATACATCAACTTTGGGCAAGATaGTGTGTCTTTCCCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: LLKLGCVVSLVASESQIHQLWAR*CVFPTV Trigger: GACTGTGGGAAAGACACAGCATCTTGCCCAAAGTTG...ATGTATCTGGCTCTCAGAAGCAACTAGTGAAACTACACAACCTAACTTAAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | TTACTTAAGTTAGGTTGTGTAGTTTCACTAGTTGCTTCTGAGAGCCAGATACATCCATGTTTCTTGCTGTaGATATGTTTAGGGCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: LLKLGCVVSLVASESQIHPCFLL*ICLGPH Trigger: ATGCGGCCCTAAACATATGCACAGCAAGAAACATGG...ATGTATCTGGCTCTCAGAAGCAACTAGTGAAACTACACAACCTAACTTAAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | TTACTTAAGTTAGGTTGTGTAGTTTCACTAGTTGCTTCTGAGAGCCAGATACATTGGCCTTCTCAAGGCTaGTGTAAATTTCTACGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLKLGCVVSLVASESQIHWPSQG*CKFLRR Trigger: TCTGCGTAGAAATTTACACCAGCCTTGAGAAGGCCA...ATGTATCTGGCTCTCAGAAGCAACTAGTGAAACTACACAACCTAACTTAAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | TTGCTTCTGAGAGCCAGATACATATTGATGGATAGGACCACTTGTTTTATTCTACTACTTGAGAGATGCTaGCTAAACGGAGTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LLLRARYILMDRTTCFILLLERC*LNGVSL Trigger: CAAGGAAACTCCGTTTAGCCAGCATCTCTCAAGTAG...TAGAATAAAACAAGTGGTCCTATCCATCAATATGTATCTGGCTCTCAGAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | GATACAAGCCATAATTCAATTAAGATGGTTTACCATACCTTCACTTCTCTGTCCGAAGCACAGTATAGATaGGTAAGGTGGTCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DTSHNSIKMVYHTFTSLSEAQYR*VRWSWR Trigger: TCTCCAAGACCACCTTACCCATCTATACTGTGCTTC...GGACAGAGAAGTGAAGGTATGGTAAACCATCTTAATTGAATTATGGCTTGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR TCA 90 bp | TTACTTAAGTTAGGTTGTGTAGTTTCACTAGTTGCTTCTGAGAGCCAGATACATTATGGTAAAAGCATTTaGTTCCCAGCTTCTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLKLGCVVSLVASESQIHYGKSI*FPASGA Trigger: AGCTCCAGAAGCTGGGAATCAAATGCTTTTACCATA...ATGTATCTGGCTCTCAGAAGCAACTAGTGAAACTACACAACCTAACTTAAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | TACAGTTTTATAATTCCTGATGTCTATCATGTGGCAAACACAATACAGCCACAACCACAGTCTTCAAAGTaGACGGAGAGAAAGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YSFIIPDVYHVANTIQPQPQSSK*TERKSS Trigger: TGAACTCTTTCTCTCCGTGCACTTTGAAGACTGTGG...TTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAGGAATTATAAAACTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | GATACAAGCCATAATTCAATTAAGATGGTTTACCATACCTTCACTTCTCTGTCCCGCAAGATATTGGTGTaGTTCAACAGTAGTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: DTSHNSIKMVYHTFTSLSRKILV*FNSSFS Trigger: GCTGAAACTACTGTTGAACCACACCAATATCTTGCG...GGACAGAGAAGTGAAGGTATGGTAAACCATCTTAATTGAATTATGGCTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CCA 90 bp | GATACAAGCCATAATTCAATTAAGATGGTTTACCATACCTTCACTTCTCTGTCCCTGATGTCTATCATGTaGCAAACACAATACAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DTSHNSIKMVYHTFTSLSLMSIM*QTQYSH Trigger: GTGGCTGTATTGTGTTTGCCACATGATAGACATCAG...GGACAGAGAAGTGAAGGTATGGTAAACCATCTTAATTGAATTATGGCTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR TCA 90 bp | TTGCTTCTGAGAGCCAGATACATATTGATGGATAGGACCACTTGTTTTATTCTATGCCATAGGCTTTGCTaGCAAAATCTGTTAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: LLLRARYILMDRTTCFILCHRLC*QNLLIA Trigger: TGCAATTAACAGATTTTGTCAGCAAAGCCTATGGCA...TAGAATAAAACAAGTGGTCCTATCCATCAATATGTATCTGGCTCTCAGAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR TCA 90 bp | TACAGTTTTATAATTCCTGATGTCTATCATGTGGCAAACACAATACAGCCACAAGAGCCAGATACATATTaGTGGATAGGACCACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: YSFIIPDVYHVANTIQPQEPDTY*WIGPLV Trigger: AACAAGTGGTCCTATCCATCAATATGTATCTGGCTC...TTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAGGAATTATAAAACTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | GATACAAGCCATAATTCAATTAAGATGGTTTACCATACCTTCACTTCTCTGTCCCTTTGGTTAGGGAGATaGCAAATGAAGCACAGTATA | + |
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Preference number: 4 (lower is better) Translates to: DTSHNSIKMVYHTFTSLSLWLGR*QMKHSI Trigger: TATACTGTGCTTCATTTGGCATCTCCCTAACCAAAG...GGACAGAGAAGTGAAGGTATGGTAAACCATCTTAATTGAATTATGGCTTGTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR GCA 90 bp | TTACTTAAGTTAGGTTGTGTAGTTTCACTAGTTGCTTCTGAGAGCCAGATACATACAAAATCTGTTAATTaGAACTTTGGGCAAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: LLKLGCVVSLVASESQIHTKSVN*NFGQDA Trigger: AGCATCTTGCCCAAAGTTGCAATTAACAGATTTTGT...ATGTATCTGGCTCTCAGAAGCAACTAGTGAAACTACACAACCTAACTTAAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS GCA 90 bp | CTTTCAGCAGGGATGGGGCCAAGCTGCAGCAGTGTGCCAGCCAGCTaGTTCCCAAGGTGGCCACCTCCAATGATGCCCACCTTAAACTCT | + |
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Preference number: 5 (lower is better) Translates to: LSAGMGPSCSSVPAS*FPRWPPPMMPTLNS Trigger: AGAGTTTAAGGTGGGCATCATTGGAGGTGGCCACCTTGGGAAGCAGCTGGCTGGCACACTGCTGCAGCTTGGCCCCATCCCTGCTGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS CCA 90 bp | ATGGGGCCAAGCTGCAGCAGTGTGCCAGCCAGCTGCTTCCCAAGGTaGCCACCTCCAATGATGCCCACCTTAAACTCTTCAGGAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: MGPSCSSVPASCFPR*PPPMMPTLNSSGVA Trigger: AGCCACTCCTGAAGAGTTTAAGGTGGGCATCATTGGAGGTGGCCACCTTGGGAAGCAGCTGGCTGGCACACTGCTGCAGCTTGGCCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS GCA 90 bp | GTTGCATGGGCACAAGCCTCGATCATCAGTCCCCGAGAACGGCCCTaGAAATACAGCCAGATACGATCTTCCTCTGGAACCCCATACTCA | + |
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Preference number: 5 (lower is better) Translates to: VAWAQASIISPRERP*KYSQIRSSSGTPYS Trigger: TGAGTATGGGGTTCCAGAGGAAGATCGTATCTGGCTGTATTTGCAGGGCCGTTCTCGGGGACTGATGATCGAGGCTTGTGCCCATGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS CCA 90 bp | TCCCCGAGAACGGCCCTGCAAATACAGCCAGATACGATCTTCCTCTaGAACCCCATACTCAAACTGCAGGGACTCAAGGTCCTGGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SPRTALQIQPDTIFL*NPILKLQGLKVLEH Trigger: ATGCTCCAGGACCTTGAGTCCCTGCAGTTTGAGTATGGGGTTCCAGAGGAAGATCGTATCTGGCTGTATTTGCAGGGCCGTTCTCGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS GCA 90 bp | TGCAACTTTGGGCAAGATGCTGTGTCTTTCCCACAGTCTTCAAAGTaGACGGAGAGAAAGAGTTCACTCAGAAGCTGCAGCACTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CNFGQDAVSFPQSSK*TERKSSLRSCSTWE Trigger: CTCCCAAGTGCTGCAGCTTCTGAGTGAACTCTTTCTCTCCGTGCACTTTGAAGACTGTGGGAAAGACACAGCATCTTGCCCAAAGTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 90 bp | TCTTCCTCTGGAACCCCATACTCAAACTGCAGGGACTCAAGGTCCTaGAGCATGTCCATTTCCAAGCCACTATTTCCTGCAGTGATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSGTPYSNCRDSRS*SMSISKPLFPAVID Trigger: GTCTATCACTGCAGGAAATAGTGGCTTGGAAATGGACATGCTCCAGGACCTTGAGTCCCTGCAGTTTGAGTATGGGGTTCCAGAGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS GCA 90 bp | AAATACAGCCAGATACGATCTTCCTCTGGAACCCCATACTCAAACTaGAGGGACTCAAGGTCCTGGAGCATGTCCATTTCCAAGCCACTA | + |
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Preference number: 5 (lower is better) Translates to: KYSQIRSSSGTPYSN*RDSRSWSMSISKPL Trigger: TAGTGGCTTGGAAATGGACATGCTCCAGGACCTTGAGTCCCTGCAGTTTGAGTATGGGGTTCCAGAGGAAGATCGTATCTGGCTGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS GCA 90 bp | CCACAGTCTTCAAAGTGCACGGAGAGAAAGAGTTCACTCAGAAGCTaGAGCACTTGGGAGTGGGCCATGTTTCTTGCTGTGCATATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQSSKCTERKSSLRS*STWEWAMFLAVHMF Trigger: AAACATATGCACAGCAAGAAACATGGCCCACTCCCAAGTGCTGCAGCTTCTGAGTGAACTCTTTCTCTCCGTGCACTTTGAAGACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS-3UTR CAA 90 bp | CTGATGTCTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATCAGAAGCTGCAGCACTaGGGAGTGGGCCATGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LMSIMWQTQYSHKTPTVNQKLQH*GVGHVS Trigger: AGAAACATGGCCCACTCCCAAGTGCTGCAGCTTCTG...ATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS CCA 90 bp | AGATGGGTAAGGTGGTCTTGGAGAACAGGACTACTTGAGAGATGCTaGCTAAACGGAGTTTCCTTGAGTTGCACAGCAGTCAGATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RWVRWSWRTGLLERC*LNGVSLSCTAVRSN Trigger: GTTTGATCTGACTGCTGTGCAACTCAAGGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 90 bp | AGGGAGATGCCAAATGAAGCACAGTATAGATGGGTAAGGTGGTCTTaGAGAACAGGACTACTTGAGAGATGCTGGCTAAACGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: REMPNEAQYRWVRWS*RTGLLERCWLNGVS Trigger: GGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCTATACTGTGCTTCATTTGGCATCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 90 bp | GGCTGTTCTTTGGTTAGGGAGATGCCAAATGAAGCACAGTATAGATaGGTAAGGTGGTCTTGGAGAACAGGACTACTTGAGAGATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCSLVREMPNEAQYR*VRWSWRTGLLERCW Trigger: CCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCTATACTGTGCTTCATTTGGCATCTCCCTAACCAAAGAACAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 90 bp | TCTTCCTCTGGAACCCCATACTCAAACTGCAGGGACTCAAGGTCCTaGAGCATGTCCATTTCCAAGCCACTATTTCCAAACAGAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSGTPYSNCRDSRS*SMSISKPLFPNRED Trigger: ATCTTCTCTGTTTGGAAATAGTGGCTTGGAAATGGACATGCTCCAGGACCTTGAGTCCCTGCAGTTTGAGTATGGGGTTCCAGAGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555603.1 |
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| CDS GCA 90 bp | TATAGATGGGTAAGGTGGTCTTGGAGAACAGGACTACTTGAGAGATaGTGGCTAAACGGAGTTTCCTTGAGTTGCACAGCAGTCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: YRWVRWSWRTGLLER*WLNGVSLSCTAVRS Trigger: TGATCTGACTGCTGTGCAACTCAAGGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 90 bp | TTGGTTAGGGAGATGCCAAATGAAGCACAGTATAGATGGGTAAGGTaGTCTTGGAGAACAGGACTACTTGAGAGATGCTGGCTAAACGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVREMPNEAQYRWVR*SWRTGLLERCWLNG Trigger: TCCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCTATACTGTGCTTCATTTGGCATCTCCCTAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS-3UTR CAA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAGTTTGCAGAAGAAGGTaGCATGGGCACAAGCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSCGKHNTATRLPQSIVIVCRRR*HGHKPR Trigger: TCGAGGCTTGTGCCCATGCAACCTTCTTCTGCAAAC...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS CCA 90 bp | AATGATGCTCTCAAATTATATAATAGTTTGCAGAAGAAGGTTGCATaGGCACAAGCCTCGATCATCAGTCCCCGAGAACGGCCCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NDALKLYNSLQKKVA*AQASIISPRERPCK Trigger: TTTGCAGGGCCGTTCTCGGGGACTGATGATCGAGGCTTGTGCCCATGCAACCTTCTTCTGCAAACTATTATATAATTTGAGAGCATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS-3UTR CAA 90 bp | CTGATGTCTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATCGGAGTTTCCTTGAGTaGCACAGCAGTCAGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LMSIMWQTQYSHKTPTVNRSFLE*HSSQIK Trigger: TTTGATCTGACTGCTGTGCAACTCAAGGAAACTCCG...ATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS TCA 90 bp | TGGGCCAACAGGAAAGTAATTTTCAAAAGAATGCCAGAAATATGTTaGGCCGTGACCAGCAGGACTGTAGGGACAGGTAGCTTGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WANRKVIFKRMPEIC*AVTSRTVGTGSLKN Trigger: ATTCTTCAAGCTACCTGTCCCTACAGTCCTGCTGGTCACGGCTCAACATATTTCTGGCATTCTTTTGAAAATTACTTTCCTGTTGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555901.1 |
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| CDS-3UTR CAA 90 bp | AAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATCAGGGCACAAAGTGGGCCATGTTTCTaGCTGTGCATATGTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KHNTATRLPQSIVIIRAQSGPCF*LCICLG Trigger: CCCTAAACATATGCACAGCAAGAAACATGGCCCACT...TTGTGCCCTGATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CAA 90 bp | CTATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATACTAAACGGAGTTTCCTaGAGTTGCACAGCAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSCGKHNTATRLPQSIVILNGVS*SCTAVR Trigger: TCTGACTGCTGTGCAACTCAAGGAAACTCCGTTTAG...TATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CAA 90 bp | ATCATGTGGCAAACACAATACAGCCACAAGACTCCCACAGTCAATTGTGATAATGTAGGGACAGGTAGCTaGAAGAATCGTAGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IMWQTQYSHKTPTVNCDNVGTGS*KNRRIL Trigger: CAAGATCCTACGATTCTTCAAGCTACCTGTCCCTAC...ATTATCACAATTGACTGTGGGAGTCTTGTGGCTGTATTGTGTTTGCCACATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS TCA 90 bp | CCCTCCAACCACTTGATATTGAGGATTATTCCCCCTACACATCAATaGGAAGGTAAATACCAGTTAGCACCACCAAAAATGAGTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSNHLILRIIPPTHQ*EGKYQLAPPKMSCR Trigger: TCTGCAACTCATTTTTGGTGGTGCTAACTGGTATTTACCTTCTCATTGATGTGTAGGGGGAATAATCCTCAATATCAAGTGGTTGGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000555901.1 |
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| CDS TCA 90 bp | CACACACACACACACACACACACACACACACAGAGAGAGAGAGATTaGTTTAATAAGATAGCAATGGGCCAACAGGAAAGTAATTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTQRERD*FNKIAMGQQESNFQ Trigger: TTGAAAATTACTTTCCTGTTGGCCCATTGCTATCTTATTAAATCAATCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555901.1 |
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| CDS-3UTR CAA 90 bp | TACAGTTTTATAATTCCTGATGTCTATCATGTGGCAAACACAATACAGCCACAAAAGAATCGTAGGATCTaGGAGAGCAGCTATGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSFIIPDVYHVANTIQPQKNRRI*ESSYDS Trigger: GGAGTCATAGCTGCTCTCCAAGATCCTACGATTCTT...TTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAGGAATTATAAAACTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CAA 90 bp | TTACTTAAGTTAGGTTGTGTAGTTTCACTAGTTGCTTCTGAGAGCCAGATACATTCCAACCACTTGATATaGAGGATTATTCCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLKLGCVVSLVASESQIHSNHLI*RIIPPA Trigger: TGCTGGGGGAATAATCCTCAATATCAAGTGGTTGGA...ATGTATCTGGCTCTCAGAAGCAACTAGTGAAACTACACAACCTAACTTAAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CAA 90 bp | TTGCTTCTGAGAGCCAGATACATATTGATGGATAGGACCACTTGTTTTATTCTAACTCCCTCCAACCACTaGATATTGAGGATTATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRARYILMDRTTCFILTPSNH*ILRIIP Trigger: GGGAATAATCCTCAATATCAAGTGGTTGGAGGGAGT...TAGAATAAAACAAGTGGTCCTATCCATCAATATGTATCTGGCTCTCAGAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CAA 90 bp | TACAGTTTTATAATTCCTGATGTCTATCATGTGGCAAACACAATACAGCCACAAATGACTGGCTGTTCTTaGGTTAGGGAGATGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSFIIPDVYHVANTIQPQMTGCS*VREMPN Trigger: ATTTGGCATCTCCCTAACCAAAGAACAGCCAGTCAT...TTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAGGAATTATAAAACTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CAA 90 bp | TTACTTAAGTTAGGTTGTGTAGTTTCACTAGTTGCTTCTGAGAGCCAGATACATAGAGCCAGATACATATaGATGGATAGGACCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLKLGCVVSLVASESQIHRARYI*MDRTTC Trigger: ACAAGTGGTCCTATCCATCAATATGTATCTGGCTCT...ATGTATCTGGCTCTCAGAAGCAACTAGTGAAACTACACAACCTAACTTAAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS-3UTR CAA 90 bp | TACAGTTTTATAATTCCTGATGTCTATCATGTGGCAAACACAATACAGCCACAACTGTTAATTGCAACTTaGGGCAAGATGCTGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YSFIIPDVYHVANTIQPQLLIAT*GKMLCL Trigger: AAGACACAGCATCTTGCCCAAAGTTGCAATTAACAG...TTGTGGCTGTATTGTGTTTGCCACATGATAGACATCAGGAATTATAAAACTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380835.6 |
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| CDS GCA 72 bp | GGGATGGGGCCAAGCTGCAGCAGTGTGCCAGCCAGCTaGTTCCCAAGGTGGCCACCTCCAATGATGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GMGPSCSSVPAS*FPRWPPPMMPT Trigger: GGTGGGCATCATTGGAGGTGGCCACCTTGGGAAGCAGCTGGCTGGCACACTGCTGCAGCTTGGCCCCATCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS GCA 72 bp | GCACAAGCCTCGATCATCAGTCCCCGAGAACGGCCCTaGAAATACAGCCAGATACGATCTTCCTCTGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: AQASIISPRERP*KYSQIRSSSGT Trigger: GGTTCCAGAGGAAGATCGTATCTGGCTGTATTTGCAGGGCCGTTCTCGGGGACTGATGATCGAGGCTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS GCA 72 bp | TCAAAGTGCACGGAGAGAAAGAGTTCACTCAGAAGCTaGAGCACTTGGGAGTGGGCCATGTTTCTTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SKCTERKSSLRS*STWEWAMFLAV Trigger: CACAGCAAGAAACATGGCCCACTCCCAAGTGCTGCAGCTTCTGAGTGAACTCTTTCTCTCCGTGCACTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CAA 90 bp | TGGAGAACAGGACTACTTGAGAGATGCTGGCTAAACGGAGTTTCCTaGAGTTGCACAGCAGTCAGATCAAACCAGGGGAAAGGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WRTGLLERCWLNGVS*SCTAVRSNQGKGLS Trigger: GGAAAGGCCTTTCCCCTGGTTTGATCTGACTGCTGTGCAACTCAAGGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS TCA 72 bp | CCCAACTCACCAGATCAGCGTTATGGTAAAAGCATTTaGTTCCCAGCTTCTGGAGCTCACCCAGAGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PNSPDQRYGKSI*FPASGAHPESL Trigger: CAGAGACTCTGGGTGAGCTCCAGAAGCTGGGAATCAAATGCTTTTACCATAACGCTGATCTGGTGAGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS GCA 72 bp | CTTGAGAGATGCTGGCTAAACGGAGTTTCCTTGAGTTaGACAGCAGTCAGATCAAACCAGGGGAAAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LERCWLNGVSLS*TAVRSNQGKGL Trigger: AAGGCCTTTCCCCTGGTTTGATCTGACTGCTGTGCAACTCAAGGAAACTCCGTTTAGCCAGCATCTCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 72 bp | AGAAAGAGTTCACTCAGAAGCTGCAGCACTTGGGAGTaGGCCATGTTTCTTGCTGTGCATATGTTTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKSSLRSCSTWE*AMFLAVHMFRA Trigger: GGCCCTAAACATATGCACAGCAAGAAACATGGCCCACTCCCAAGTGCTGCAGCTTCTGAGTGAACTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 72 bp | AGGTGGTCTTGGAGAACAGGACTACTTGAGAGATGCTaGCTAAACGGAGTTTCCTTGAGTTGCACAGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RWSWRTGLLERC*LNGVSLSCTAV Trigger: GACTGCTGTGCAACTCAAGGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS GCA 72 bp | GTAAGGTGGTCTTGGAGAACAGGACTACTTGAGAGATaGTGGCTAAACGGAGTTTCCTTGAGTTGCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VRWSWRTGLLER*WLNGVSLSCTA Trigger: TGCTGTGCAACTCAAGGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CAA 72 bp | GGACTACTTGAGAGATGCTGGCTAAACGGAGTTTCCTaGAGTTGCACAGCAGTCAGATCAAACCAGGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLLERCWLNGVS*SCTAVRSNQGK Trigger: TTTCCCCTGGTTTGATCTGACTGCTGTGCAACTCAAGGAAACTCCGTTTAGCCAGCATCTCTCAAGTAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 72 bp | GAGATGCCAAATGAAGCACAGTATAGATGGGTAAGGTaGTCTTGGAGAACAGGACTACTTGAGAGATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EMPNEAQYRWVR*SWRTGLLERCW Trigger: CCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCTATACTGTGCTTCATTTGGCATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS TCA 72 bp | CTGAGTTCTCTTATTGGGATGGAAAGCCTGTGGAAATaGCTGGCTGTTCTTTGGTTAGGGAGATGCCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: LSSLIGMESLWK*LAVLWLGRCQM Trigger: CATTTGGCATCTCCCTAACCAAAGAACAGCCAGTCATTTCCACAGGCTTTCCATCCCAATAAGAGAACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 72 bp | CCAAATGAAGCACAGTATAGATGGGTAAGGTGGTCTTaGAGAACAGGACTACTTGAGAGATGCTGGCTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PNEAQYRWVRWS*RTGLLERCWLN Trigger: GTTTAGCCAGCATCTCTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCTATACTGTGCTTCATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 72 bp | TTGGTTAGGGAGATGCCAAATGAAGCACAGTATAGATaGGTAAGGTGGTCTTGGAGAACAGGACTACTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVREMPNEAQYR*VRWSWRTGLLE Trigger: CTCAAGTAGTCCTGTTCTCCAAGACCACCTTACCCATCTATACTGTGCTTCATTTGGCATCTCCCTAACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CAA 72 bp | TGGGATGGAAAGCCTGTGGAAATGACTGGCTGTTCTTaGGTTAGGGAGATGCCAAATGAAGCACAGTATAGA | + |
|
Preference number: 6 (lower is better) Translates to: WDGKPVEMTGCS*VREMPNEAQYR Trigger: TCTATACTGTGCTTCATTTGGCATCTCCCTAACCAAAGAACAGCCAGTCATTTCCACAGGCTTTCCATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CAA 90 bp | TTCTCTTATTGGGATGGAAAGCCTGTGGAAATGACTGGCTGTTCTTaGGTTAGGGAGATGCCAAATGAAGCACAGTATAGATGGGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSYWDGKPVEMTGCS*VREMPNEAQYRWVR Trigger: CCTTACCCATCTATACTGTGCTTCATTTGGCATCTCCCTAACCAAAGAACAGCCAGTCATTTCCACAGGCTTTCCATCCCAATAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380835.6 ENST00000555901.1 |
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| CDS CCA 72 bp | AATCTTCATCATACTGATACTGAGGCCGCAAGATATTaGTGTGGTTCAACAGTAGTTTCAGCCTGGGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NLHHTDTEAARY*CGSTVVSAWVV Trigger: CACTACCCAGGCTGAAACTACTGTTGAACCACACCAATATCTTGCGGCCTCAGTATCAGTATGATGAAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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| CDS TCA 72 bp | CACTTGATATTGAGGATTATTCCCCCTACACATCAATaGGAAGGTAAATACCAGTTAGCACCACCAAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: HLILRIIPPTHQ*EGKYQLAPPKM Trigger: CATTTTTGGTGGTGCTAACTGGTATTTACCTTCTCATTGATGTGTAGGGGGAATAATCCTCAATATCAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000555901.1 |
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| CDS GCA 72 bp | TCTTATTTAATGATGCTCTCAAATTATATAATAGTTTaGAGAAGAAGGTTGCATGGGCACAAGCCTCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SYLMMLSNYIIV*RRRLHGHKPRS Trigger: TGATCGAGGCTTGTGCCCATGCAACCTTCTTCTGCAAACTATTATATAATTTGAGAGCATCATTAAATAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380835.6 ENST00000555603.1 ENST00000555901.1 |
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