RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOXO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196408

Ensembl transcript IDs: ENST00000354249.8, ENST00000356120.9, ENST00000397280.8, ENST00000563181.1, ENST00000566005.5, ENST00000567471.1, ENST00000569739.1

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTTCCCCAGCCCTGGGATaGCGCGGTCCATCCCCTCAT +
Preference number: 2 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPSPALG*RGPSPH
Trigger: ATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGA...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRPGRGS*APRVPT
Trigger: TGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGG...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAPGRGS*APRVPT
Trigger: TGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGG...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCTGCCTCCCCGTGCTTaGGAGGGCTCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILLPPRA*EGSGGP
Trigger: GGGTCCCCCAGAGCCCTCTCAAGCACGGGGAGGCAG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCCAGGGCCCTGCGTGTaGCGGTGCAGCAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSPGPCV*RCSSGS
Trigger: AGAGCCGCTGCTGCACCGTCACACGCAGGGCCCTGG...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCCGTGCCACGCGCTCTaGAGTCGCCAGCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSPCHAL*SRQQPP
Trigger: CGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGG...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGGGAGGGGCGGTGGCCTaGGAGGGTTCAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAGGAVA*EGSGKP
Trigger: GGGCTTCCCTGAACCCTCCCAGGCCACCGCCCCTCC...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGAGCAGCGGCTCTGGATaGCGCCCGGCGAAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSSSGSG*RPAKVG
Trigger: CCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCT...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCAGCAGCGGCTCTGGATaGCGCCCGGCGAAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRSSGSG*RPAKVG
Trigger: CCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCT...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGGCTCCTCCCCAGCCCTaGGATGGCGCGGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSAPPQP*DGAVHP
Trigger: GGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGATCGTCGGGCTCCGTaGCACGCGCTCTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILDRRAP*HALCSR
Trigger: GCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATC...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCACCAGCCTGAGGGGTaGCGCAGCAGCACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILHQPEG*RSSTSR
Trigger: CCTGGACGTGCTGCTGCGGCACCCCTCAGGCTGGTG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCCCGGTCGCCGTACCTaGATAGCCACCAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRPGRRT*IATSRG
Trigger: ACCGCGGCTGGTGGCTATGCAGGTACGGCGACCGGG...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCCCGGTCGCCGTACCTaGATAGCCACCAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILPGRRT*IATSRG
Trigger: ACCGCGGCTGGTGGCTATGCAGGTACGGCGACCGGG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGGATCCTCGCGCTCACTaGTCCGTCGTGGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSDPRAH*SVVGCG
Trigger: GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATC...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCGATCCTCGCGCTCACTaGTCCGTCGTGGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRDPRAH*SVVGCG
Trigger: GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATC...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCCTCCAGACTGTGGATaGAGAGGCGGCCCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRPPDCG*RGGPQR
Trigger: GCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGAGG...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGGTGCAGCAGCGGCTCTaGATGGCGCCCGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAVQQRL*MAPGEG
Trigger: ACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTGCAC...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCGTGCAGCAGCGGCTCTaGATGGCGCCCGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRVQQRL*MAPGEG
Trigger: ACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTGCAC...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGGGTGTCGCTGCCGTCTaGCCAGCGCACAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAGVAAV*PAHREG
Trigger: GCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACC...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCTCCTGGGCCTGCGCCTaGAAAGGCCTATCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILSWACA*KGLSRV
Trigger: CACGCGGGATAGGCCTTTTCAGGCGCAGGCCCAGGA...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCCACCAGCCGCGGTCTaGCGTTTCCAACACGCGCAC +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSPPAAV*RFQHAH
Trigger: GTGCGCGTGTTGGAAACGTCAGACCGCGGCTGGTGG...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCCACCAGCCGCGGTCTaGCGTTTCCAACACGCGCAC +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRPPAAV*RFQHAH
Trigger: GTGCGCGTGTTGGAAACGTCAGACCGCGGCTGGTGG...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGGCGCGAGAAAGAGGCTaGTCCTCTGGGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSARERG*SSGVGR
Trigger: CCTGCCCACCCCAGAGGAGCAGCCTCTTTCTCGCGC...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGAGAACTGGGGACCGCTaGTCCCTAGGGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSRTGDR*SLGTGL
Trigger: GAGGCCCGTCCCTAGGGAGCAGCGGTCCCCAGTTCT...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCAGAACTGGGGACCGCTaGTCCCTAGGGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILRTGDR*SLGTGL
Trigger: GAGGCCCGTCCCTAGGGAGCAGCGGTCCCCAGTTCT...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGGCTCATCTGCGCGGCTaGTCTCGTAGGCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSAHLRG*SRRRGK
Trigger: CTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGC...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGTGCTCCGTCGTGGGGTaGGGCACAGAGTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILACSVVG*GTESTH
Trigger: GTGCGTGGACTCTGTGCCGCACCCCACGACGGAGCA...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCTCCAGGTAGGGCGCTaGAAACCAGGCGGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSLQVGR*KPGGLP
Trigger: CGGCAGACCGCCTGGTTTCCAGCGCCCTACCTGGAG...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGTCCCCAGCCCTGGGATaGCGCGGTCCATCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSSPALG*RGPSPH
Trigger: ATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGA...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCTCCCCAGCCCTGGGATaGCGCGGTCCATCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILSPALG*RGPSPH
Trigger: ATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGA...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGGTGCGAAGAAGCCAGTaGTCGTCGGGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSVRRSQ*SSGSVP
Trigger: TGGCACGGAGCCCGACGATCACTGGCTTCTTCGCAC...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGTGCGAAGAAGCCAGTaGTCGTCGGGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILVRRSQ*SSGSVP
Trigger: TGGCACGGAGCCCGACGATCACTGGCTTCTTCGCAC...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCAGGCAGCGCAGGCTCTaGGCCTCCAGACTGTGGATG +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILRQRRL*ASRLWM
Trigger: CATCCACAGTCTGGAGGCTCAGAGCCTGCGCTGCCT...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGAGGCAGCGCAGGCTCTaGGCCTCCAGACTGTGGATG +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSRQRRL*ASRLWM
Trigger: CATCCACAGTCTGGAGGCTCAGAGCCTGCGCTGCCT...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCTGGGTATCGGGGGCCTaGCATGGCTGTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILWVSGA*HGCGFQ
Trigger: CTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCA...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCACGGACAGCTCATCTaGGCGGCTGCTCTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAHGQLI*AAALVG
Trigger: GCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTG...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCACGGACAGCTCATCTaGGCGGCTGCTCTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRHGQLI*AAALVG
Trigger: GCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTG...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCCAGCCCTGGAGGCGTaGAAGACTGAAGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRPALEA*KTEEGA
Trigger: CGCCCCTTCTTCAGTCTTGCACGCCTCCAGGGCTGG...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354249.8
CDS-3UTR CCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCAAGAGGCTGCTCCTCTaGGGTGGGCAGGATCACCCG +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRKRLLL*GGQDHP
Trigger: CGGGTGATCCTGCCCACCCCAGAGGAGCAGCCTCTT...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCGGGAAGCACAGAACTaGGGACCGCTGCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAREAQN*GPLLPR
Trigger: CCTAGGGAGCAGCGGTCCCCAGTTCTGTGCTTCCCG...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCTCACTGCTCCGTCGTaGGGTGCGGCACAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSLTAPS*GAAQSP
Trigger: TGGACTCTGTGCCGCACCCCACGACGGAGCAGTGAG...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGACGTTTGGAGCCTCTTaGTCTGCACCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILATFGAS*SAPGLP
Trigger: GGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGT...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCTGGAGCCTCTTGATCTaGACCAGGGCTGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRWSLLI*TRAAPC
Trigger: GCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCA...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCAGGAGCACAGGGATTaGGGGACTTCCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILQEHRD*GTSRQS
Trigger: GCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCAACACCTCAAGCCTGTaGGGTCCTTGTGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILNTSSL*GPCGAA
Trigger: GGCGGCTCCACAAGGACCCCACAGGCTTGAGGTGTT...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGAACACCTCAAGCCTGTaGGGTCCTTGTGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSNTSSL*GPCGAA
Trigger: GGCGGCTCCACAAGGACCCCACAGGCTTGAGGTGTT...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGGCCTGCCATGGCTGTaGCTTCCAGGCTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILGLPWL*LPGCRF
Trigger: GAATCTGCAGCCTGGAAGCCACAGCCATGGCAGGCC...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGGGCCTGCCATGGCTGTaGCTTCCAGGCTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAGLPWL*LPGCRF
Trigger: GAATCTGCAGCCTGGAAGCCACAGCCATGGCAGGCC...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCTGGAGCCGCCCCAGCTaGGTCCTTTGCAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILWSRPS*VLCSFL
Trigger: AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCA...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCTGGAGCCGCCCCAGCTaGGTCCTTTGCAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRWSRPS*VLCSFL
Trigger: AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCA...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCAGGCTGCAGATTCCTaGAATGGGCGAGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILQAADS*NGRGPF
Trigger: GAAGGGTCCTCGCCCATTTCAGGAATCTGCAGCCTG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCACCAGGGCTGCCCCTTaGACTGAAACTGGGTATCGG +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILTRAAP*TETGYR
Trigger: CCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGT...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCATTCGTCCCAACTCCTaGGCACGAAGGTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRIRPNS*ARRCRC
Trigger: GCAGCGACACCTTCGTGCGCAGGAGTTGGGACGAAT...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGGTCCAGGGGTTGCGGTaGGAAGAAGCCAGTGATCGT +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSVQGLR*EEASDR
Trigger: ACGATCACTGGCTTCTTCGCACCGCAACCCCTGGAC...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCTTTGCAGCTTTCTTaGTGTCCCCCAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAPLQLS*CPPSPR
Trigger: TCGTGGGCTTGGGGGACAGCAAGAAAGCTGCAAAGG...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCCTGTGGCTTCCAGGCTaGAGATTCCTGAAATGGGCG +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRLWLPG*RFLKWA
Trigger: CGCCCATTTCAGGAATCTGCAGCCTGGAAGCCACAG...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCACGCGTCCCAACAGTaGTGCATCGAGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILHASQQ*CIEKLW
Trigger: CCAAAGCTTCTCGATGCACCACTGTTGGGACGCGTG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCACGCGTCCCAACAGTaGTGCATCGAGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILAHASQQ*CIEKLW
Trigger: CCAAAGCTTCTCGATGCACCACTGTTGGGACGCGTG...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCCTGGGATAGAATCCTaGCAACACCTCAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILPGIES*QHLKPV
Trigger: CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGTGCAGATTCCTGAAATaGGCGAGGACCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILACRFLK*ARTLLP
Trigger: AGGCAGAAGGGTCCTCGCCCATTTCAGGAATCTGCA...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCTGCAGATTCCTGAAATaGGCGAGGACCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILCRFLK*ARTLLP
Trigger: AGGCAGAAGGGTCCTCGCCCATTTCAGGAATCTGCA...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCACTTCCAGGCAGAGCTaGTGGGAGGAAGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILTSRQS*WEEEEE
Trigger: TTCTTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGT...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCAGGGTCTTCTTGAGCTaGCTGAATTCGTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILRVFLS*LNSSQL
Trigger: GAGTTGGGACGAATTCAGGCAGCTCAAGAAGACCCT...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356120.9
CDS-3UTR GCA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGTTGAGGGTCTTGAGCTaGCTGAATTCGTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSLRVLS*LNSSQL
Trigger: GAGTTGGGACGAATTCAGGCAGCTCAAGACCCTCAA...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354249.8
CDS-3UTR CCA 90 bp GCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGACCCAGAAAACCCCCTaGGATAGAATCCTGGCAACA +
Preference number: 4 (lower is better)
Translates to: APPQPWDGAVHPLIGILATQKTP*DRILAT
Trigger: TGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGT...CGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCGAGAAGGCAAACGTTTaGAGCCTCTTGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSREKANV*SLLICT
Trigger: GGTGCAGATCAAGAGGCTCCAAACGTTTGCCTTCTC...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCTGCATCGAGAAGCTTTaGGAGAACGCGGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRCIEKL*ENAVRS
Trigger: AGATCTGACCGCGTTCTCCCAAAGCTTCTCGATGCA...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCTGCCTCCCCGTGCTTaGGAGGGCTCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLLPPRA*EGSGGP
Trigger: GGGTCCCCCAGAGCCCTCTCAAGCACGGGGAGGCAG...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCCAGGGCCCTGCGTGTaGCGGTGCAGCAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLPGPCV*RCSSGS
Trigger: AGAGCCGCTGCTGCACCGTCACACGCAGGGCCCTGG...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTCCGTGCCACGCGCTCTaGAGTCGCCAGCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPPCHAL*SRQQPP
Trigger: CGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGG...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGATCGTCGGGCTCCGTaGCACGCGCTCTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLDRRAP*HALCSR
Trigger: GCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATC...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCACCAGCCTGAGGGGTaGCGCAGCAGCACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLHQPEG*RSSTSR
Trigger: CCTGGACGTGCTGCTGCGGCACCCCTCAGGCTGGTG...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGAAGGGTAGGCGGGACTaGTGCCTGGGGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLKGRRD*CLGPSC
Trigger: GCAGGAGGGCCCCAGGCAGCAGTCCCGCCTACCCTT...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354249.8
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGAGGGGCGGTGGCCTaGGAGGGTTCAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPGGAVA*EGSGKP
Trigger: GGGCTTCCCTGAACCCTCCCAGGCCACCGCCCCTCC...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCTCCTCCCCAGCCCTaGGATGGCGCGGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPAPPQP*DGAVHP
Trigger: GGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGC...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGGCTGCCCCTTGCACTaGAACTGGGTATCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLGCPLH*NWVSGA
Trigger: GGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCC...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGTCCTGGGCCTGCGCCTaGAAAGGCCTATCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLSWACA*KGLSRV
Trigger: CACGCGGGATAGGCCTTTTCAGGCGCAGGCCCAGGA...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGGGCGAGGACCCTTCTaGCTCCCCGTGCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLGRGPF*LPVLER
Trigger: CCTCTCAAGCACGGGGAGGCAGAAGGGTCCTCGCCC...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGCGCGAGAAAGAGGCTaGTCCTCTGGGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLARERG*SSGVGR
Trigger: CCTGCCCACCCCAGAGGAGCAGCCTCTTTCTCGCGC...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCCTCCTGCCTGCCTCTaGCCACAGGAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLPPACL*PQEEGG
Trigger: TCCTCCCTCCTCCTGTGGCCAGAGGCAGGCAGGAGG...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354249.8
CDS-3UTR GCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGGCGAGGACCCTTCTaGCTCCCCGTGCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPGRGPF*LPVLER
Trigger: CCTCTCAAGCACGGGGAGGCAGAAGGGTCCTCGCCC...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGTGGGTATCGGGGGCCTaGCATGGCTGTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLWVSGA*HGCGFQ
Trigger: CTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCA...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCTCATCTGCGCGGCTaGTCTCGTAGGCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPAHLRG*SRRRGK
Trigger: CTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGC...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTTGCTCCGTCGTGGGGTaGGGCACAGAGTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPCSVVG*GTESTH
Trigger: GTGCGTGGACTCTGTGCCGCACCCCACGACGGAGCA...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGAAGAGGCTGCTCCTCTaGGGTGGGCAGGATCACCCG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLKRLLL*GGQDHP
Trigger: CGGGTGATCCTGCCCACCCCAGAGGAGCAGCCTCTT...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTCTCCAGGTAGGGCGCTaGAAACCAGGCGGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPLQVGR*KPGGLP
Trigger: CGGCAGACCGCCTGGTTTCCAGCGCCCTACCTGGAG...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCACGAAGGTGTCGCTaGCGTCTGACCAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPARRCR*RLTSAQ
Trigger: CTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGC...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCTATCCCGCGTGTCCTaGGTACAGAAGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLLSRVS*VQKGCR
Trigger: CCTGCAGCCCTTCTGTACCCAGGACACGCGGGATAG...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTCGGGAAGCACAGAACTaGGGACCGCTGCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPREAQN*GPLLPR
Trigger: CCTAGGGAGCAGCGGTCCCCAGTTCTGTGCTTCCCG...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTCTCACTGCTCCGTCGTaGGGTGCGGCACAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPLTAPS*GAAQSP
Trigger: TGGACTCTGTGCCGCACCCCACGACGGAGCAGTGAG...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR TCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTACGTTTGGAGCCTCTTaGTCTGCACCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPTFGAS*SAPGLP
Trigger: GGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGT...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGACCAGGGCTGCCCCTTaGACTGAAACTGGGTATCGG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLTRAAP*TETGYR
Trigger: CCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGT...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTTGGAGCCTCTTGATCTaGACCAGGGCTGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPWSLLI*TRAAPC
Trigger: GCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCA...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTCAGGAGCACAGGGATTaGGGGACTTCCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPQEHRD*GTSRQS
Trigger: GCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTG...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTCTATCCCGCGTGTCCTaGGTACAGAAGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPLSRVS*VQKGCR
Trigger: CCTGCAGCCCTTCTGTACCCAGGACACGCGGGATAG...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCCTTTGCAGCTTTCTTaGTGTCCCCCAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLPLQLS*CPPSPR
Trigger: TCGTGGGCTTGGGGGACAGCAAGAAAGCTGCAAAGG...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGCTGTGGCTTCCAGGCTaGAGATTCCTGAAATGGGCG +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLLWLPG*RFLKWA
Trigger: CGCCCATTTCAGGAATCTGCAGCCTGGAAGCCACAG...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR GCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGTCCAGGGGTTGCGGTaGGAAGAAGCCAGTGATCGT +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPVQGLR*EEASDR
Trigger: ACGATCACTGGCTTCTTCGCACCGCAACCCCTGGAC...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGAGAAGGCAAACGTTTaGAGCCTCTTGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: HAEQALLRGTANGPLPSLEKANV*SLLICT
Trigger: GGTGCAGATCAAGAGGCTCCAAACGTTTGCCTTCTC...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CCA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTACCCAGAAAACCCCCTaGGATAGAATCCTGGCAACA +
Preference number: 4 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPTQKTP*DRILAT
Trigger: TGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGT...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS TCA 90 bp GAGGGCGGCCCTGGCGCCGTGGGCGCCGCTCCAGGGCCCTGCGTGTaGCGGTGCAGCAGCGGCTCTGGATGGCGCCCGGCGAAGGTCGGG +
Preference number: 5 (lower is better)
Translates to: EGGPGAVGAAPGPCV*RCSSGSGWRPAKVG
Trigger: CCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTGCACCGTCACACGCAGGGCCCTGGAGCGGCGCCCACGGCGCCAGGGCCGCCCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
ENST00000569739.1
CDS CCA 90 bp GTCGTGGGGTGCGGCACAGAGTCCACGCACCCTCGAGGGCGGCCCTaGCGCCGTGGGCGCCGCTCCAGGGCCCTGCGTGTGACGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VVGCGTESTHPRGRP*RRGRRSRALRVTVQ
Trigger: CTGCACCGTCACACGCAGGGCCCTGGAGCGGCGCCCACGGCGCCAGGGCCGCCCTCGAGGGTGCGTGGACTCTGTGCCGCACCCCACGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
ENST00000569739.1
CDS GCA 90 bp CGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGCGGCTaGTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACCGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RARAPPRARTAHLRG*SRRRGKHRTGDRCS
Trigger: GGAGCAGCGGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
CDS GCA 90 bp CGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGCGGCTaGTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACCTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RARAPPRARTAHLRG*SRRRGKHRTGDLVG
Trigger: TCCCACCAGGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS CCA 90 bp GTGGATGGAGAGGCGGCCCGCAGCGCGAGAAAGAGGCTGCTCCTCTaGGGTGGGCAGGATCACCCGGCTGCCGGGTGGCAGCGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VDGEAARSARKRLLL*GGQDHPAAGWQRGL
Trigger: GAGCCCGCGCTGCCACCCGGCAGCCGGGTGATCCTGCCCACCCCAGAGGAGCAGCCTCTTTCTCGCGCTGCGGGCCGCCTCTCCATCCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 90 bp CCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTaGGGCACAGAGTCCACGCACCCTCGAGGGCGGCCCTGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: PSPHRDPRAHCSVVG*GTESTHPRGRPWRR
Trigger: ACGGCGCCAGGGCCGCCCTCGAGGGTGCGTGGACTCTGTGCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000569739.1
CDS CCA 90 bp GCGGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTaGGGTGCGGCACAGAGTCCACGCACCCTCGAGGGCGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: AVHPLIGILALTAPS*GAAQSPRTLEGGPG
Trigger: GCCAGGGCCGCCCTCGAGGGTGCGTGGACTCTGTGCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000569739.1
CDS GCA 90 bp TTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTaGGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC +
Preference number: 5 (lower is better)
Translates to: FQHAHARPRGHGQLI*AAALVGAGSTELGT
Trigger: GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCGTGTTGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
ENST00000569739.1
CDS GCA 90 bp TCCAGACTGTGGATGGAGAGGCGGCCCGCAGCGCGAGAAAGAGGCTaGTCCTCTGGGGTGGGCAGGATCACCCGGCTGCCGGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRLWMERRPAARERG*SSGVGRITRLPGGS
Trigger: GCTGCCACCCGGCAGCCGGGTGATCCTGCCCACCCCAGAGGAGCAGCCTCTTTCTCGCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 90 bp CTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCTCACTaGTCCGTCGTGGGGTGCGGCACAGAGTCCACGCACCCTCGAGGG +
Preference number: 5 (lower is better)
Translates to: LGWRGPSPHRDPRAH*SVVGCGTESTHPRG
Trigger: CCCTCGAGGGTGCGTGGACTCTGTGCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000569739.1
CDS CCA 90 bp CGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGAGAAGCTTTaGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCGG +
Preference number: 5 (lower is better)
Translates to: RLPRSRTQAGLTEKL*ENAVRSPQQARLHR
Trigger: CCGGTGGAGGCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 90 bp AGGCGCGGGAAGCACAGAACTGGGGACCTGGTGGGAGTGGGTGTTTaGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCACCCT +
Preference number: 5 (lower is better)
Translates to: RRGKHRTGDLVGVGV*SHRGATEDEARPHP
Trigger: AGGGTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTCCCGCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS TCA 90 bp GGCTGGGAGCTTCAGCAGGGACGAAGGGCCTCCAGTGGGAGTCACTaGTGGGAGGCAGTCCAGTGGGAGGCAGCCGCGTGGGGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: GWELQQGRRASSGSH*WEAVQWEAAAWGSR
Trigger: GCGGCTTCCCCACGCGGCTGCCTCCCACTGGACTGCCTCCCATCAGTGACTCCCACTGGAGGCCCTTCGTCCCTGCTGAAGCTCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 90 bp GCGCCCCCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTaGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCA +
Preference number: 5 (lower is better)
Translates to: APPGKPPPSPLPYPG*PDREALGERGQISA
Trigger: TGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGGTGGCTTGCCTGGGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 90 bp GCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACCTGGTGGGAGTaGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: ALVGAGSTELGTWWE*VFGVTAGPQRTRPA
Trigger: GGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS-3UTR CAA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCCTCCAGGTCCAGGGGTaGCGGTGCGAAGAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILLQVQG*RCEEAS
Trigger: ACTGGCTTCTTCGCACCGCAACCCCTGGACCTGGAG...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS TCA 90 bp TCCCGCGTGTCCTGGGTACAGAAGGGCTGCAGGCAGCGCAGGCTCTaGGCCTCCAGACTGTGGATGGAGAGGCGGCCCGCAGCGCGAGAA +
Preference number: 5 (lower is better)
Translates to: SRVSWVQKGCRQRRL*ASRLWMERRPAARE
Trigger: TTCTCGCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGAGGCTCAGAGCCTGCGCTGCCTGCAGCCCTTCTGTACCCAGGACACGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
CDS TCA 90 bp GAGGGGTGCCGCAGCAGCACGTCCAGGCTCTCCTGGGCCTGCGCCTaGAAAGGCCTATCCCGCGTGTCCTGGGTACAGAAGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EGCRSSTSRLSWACA*KGLSRVSWVQKGCR
Trigger: CCTGCAGCCCTTCTGTACCCAGGACACGCGGGATAGGCCTTTTCAGGCGCAGGCCCAGGAGAGCCTGGACGTGCTGCTGCGGCACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
CDS TCA 90 bp CCCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTaGCCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRQATAFPAPVPRLA*PRSFGRTRSDLRSR
Trigger: CCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGGTGGCTTGCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS GCA 90 bp GAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACAGTGGTGCATCCAGGCTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: ENRFPTAAGAPGRGS*APRVPTVVHPGWPD
Trigger: GTCAGGCCAGCCTGGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTGGAAACCTATTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397280.8
ENST00000566005.5
CDS CCA 90 bp AGAAGGGCTGCAGGCAGCGCAGGCTCTGAGCCTCCAGACTGTGGATaGAGAGGCGGCCCGCAGCGCGAGAAAGAGGCTGCTCCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRAAGSAGSEPPDCG*RGGPQREKEAAPLG
Trigger: CCCCAGAGGAGCAGCCTCTTTCTCGCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGAGGCTCAGAGCCTGCGCTGCCTGCAGCCCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS CCA 90 bp GCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACCTGGTaGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGG +
Preference number: 5 (lower is better)
Translates to: AAALVGAGSTELGTW*EWVFGVTAGPQRTR
Trigger: CCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS CCA 90 bp TGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACCTaGTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACG +
Preference number: 5 (lower is better)
Translates to: CAAALVGAGSTELGT*WEWVFGVTAGPQRT
Trigger: CGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS GCA 90 bp CCGCCACCGCGGCATCAGGGTGGCCCAGGGTCACTCACCTTGAGCTaGCTGAATTCGTCCCAACTCCTGCGCACGAAGGTGTCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PPPRHQGGPGSLTLS*LNSSQLLRTKVSLP
Trigger: CGGCAGCGACACCTTCGTGCGCAGGAGTTGGGACGAATTCAGGCAGCTCAAGGTGAGTGACCCTGGGCCACCCTGATGCCGCGGTGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS GCA 90 bp CTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAGCCCACTGTaGACCCTTGAGAGGGCGGGGTCCCTCACCCGGATGGCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LLRAGTRALVFQSPL*TLERAGSLTRMAGA
Trigger: AGCCCCTGCCATCCGGGTGAGGGACCCCGCCCTCTCAAGGGTGCACAGTGGGCTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 90 bp GCGTCCCAACAGTGGTGCATCCAGGCTGGCCTGACCGAGAAGCTTTaGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCGG +
Preference number: 5 (lower is better)
Translates to: ASQQWCIQAGLTEKL*ENAVRSPQQARLHR
Trigger: CCGGTGGAGGCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGATGCACCACTGTTGGGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397280.8
ENST00000566005.5
CDS CCA 90 bp AGTGGGAGGCAGCCGCGTGGGGAAGCCGCCACCGCGGCATCAGGGTaGCCCAGGGTCACTCACCTTGAGCTGCCTGAATTCGTCCCAACT +
Preference number: 5 (lower is better)
Translates to: SGRQPRGEAATAASG*PRVTHLELPEFVPT
Trigger: AGTTGGGACGAATTCAGGCAGCTCAAGGTGAGTGACCCTGGGCCACCCTGATGCCGCGGTGGCGGCTTCCCCACGCGGCTGCCTCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS-3UTR CAA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGTCCTTTGCAGCTTTCTaGCTGTCCCCCAAGCCCACG +
Preference number: 5 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSSFAAF*LSPKPT
Trigger: CGTGGGCTTGGGGGACAGCAAGAAAGCTGCAAAGGA...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CAA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCTCCTTTGCAGCTTTCTaGCTGTCCCCCAAGCCCACG +
Preference number: 5 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILSFAAF*LSPKPT
Trigger: CGTGGGCTTGGGGGACAGCAAGAAAGCTGCAAAGGA...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CAA 90 bp CCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGAACGTTTGGAGCCTCTaGATCTGCACCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLLPSPGMARSIPSSGSSNVWSL*ICTRAA
Trigger: GGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGTT...CGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CAA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCGTGCATCGAGAAGCTTaGGGAGAACGCGGTCAGATC +
Preference number: 5 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRVHREA*GERGQI
Trigger: GATCTGACCGCGTTCTCCCAAAGCTTCTCGATGCAC...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CAA 90 bp CTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCGTCTCCTTGAGGGTCTaGAGCTGCCTGAATTCGTCC +
Preference number: 5 (lower is better)
Translates to: LLPSPGMARSIPSSGSSRVSLRV*SCLNSS
Trigger: GGACGAATTCAGGCAGCTCAAGACCCTCAAGGAGAC...GCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354249.8
CDS GCA 90 bp GAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACAGTGGTGCATCGAGAAGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: ENRFPTAAGAPGRGS*APRVPTVVHREALG
Trigger: TCCCAAAGCTTCTCGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTGGAAACCTATTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS GCA 90 bp GTCCAGGGGTTGCGGTGCGAAGAAGCCAGTGATCGTCGGGCTCCGTaGCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTC +
Preference number: 5 (lower is better)
Translates to: VQGLRCEEASDRRAP*HALCSRQQPPRIGF
Trigger: GAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCTTCTTCGCACCGCAACCCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 90 bp CGGTGCGAAGAAGCCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTaGAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RCEEASDRRAPCHAL*SRQQPPRIGFQQLQ
Trigger: CTGCAGCTGTTGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCTTCTTCGCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 90 bp GAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAA +
Preference number: 5 (lower is better)
Translates to: ENRFPTAAGAPGRGS*APRVPTVVHLKAPQ
Trigger: TTGTGGTGCCTTAAGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTGGAAACCTATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 90 bp CCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCTGCCATaGCTGTGGCTTCCAGGCTGCAGATTCCTGAAATGGGCGAGGACC +
Preference number: 5 (lower is better)
Translates to: PGLPLALKLGIGGLP*LWLPGCRFLKWART
Trigger: GGTCCTCGCCCATTTCAGGAATCTGCAGCCTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000563181.1
ENST00000567471.1
CDS-3UTR CAA 90 bp CCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCAGAGAAGGCAAACGTTaGGAGCCTCTTGATCTGCAC +
Preference number: 5 (lower is better)
Translates to: PAPPQPWDGAVHPLIGILREGKR*EPLDLH
Trigger: GTGCAGATCAAGAGGCTCCAAACGTTTGCCTTCTCT...GAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS GCA 90 bp CTGAAACTGGGTATCGGGGGCCTGCCATGGCTGTGGCTTCCAGGCTaGAGATTCCTGAAATGGGCGAGGACCCTTCTGCCTCCCCGTGCT +
Preference number: 5 (lower is better)
Translates to: LKLGIGGLPWLWLPG*RFLKWARTLLPPRA
Trigger: AGCACGGGGAGGCAGAAGGGTCCTCGCCCATTTCAGGAATCTGCAGCCTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCAGTTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000563181.1
ENST00000567471.1
CDS CCA 90 bp CTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCTGCCATGGCTGTaGCTTCCAGGCTGCAGATTCCTGAAATGGGCGAGGACCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LPLALKLGIGGLPWL*LPGCRFLKWARTLL
Trigger: CAGAAGGGTCCTCGCCCATTTCAGGAATCTGCAGCCTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000563181.1
ENST00000567471.1
CDS TCA 90 bp AAACGTTTGGAGCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTaGAACTGGGTATCGGGGGCCTGCCATGGCTGTGGCTTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: KRLEPLDLHQGCPLH*NWVSGACHGCGFQA
Trigger: AGCCTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000563181.1
ENST00000567471.1
CDS GCA 90 bp AAGGCAAACGTTTGGAGCCTCTTGATCTGCACCAGGGCTGCCCCTTaGACTGAAACTGGGTATCGGGGGCCTGCCATGGCTGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KANVWSLLICTRAAP*TETGYRGPAMAVAS
Trigger: GGAAGCCACAGCCATGGCAGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGTTTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000563181.1
ENST00000567471.1
CDS TCA 90 bp GCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTaGTACGCCGCTTTGGGCTTCACTGGTCCCTGGCGCCCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ASQQWCILRHHKNVL*YAALGFTGPWRPQA
Trigger: TGCCTGGGGGCGCCAGGGACCAGTGAAGCCCAAAGCGGCGTATCACAGTACGTTTTTGTGGTGCCTTAAGATGCACCACTGTTGGGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS TCA 90 bp CCTGAATTCGTCCCAACTCCTGCGCACGAAGGTGTCGCTGCCGTCTaGCCAGCGCACAGAGAAGGCAAACGTTTGGAGCCTCTTGATCTG +
Preference number: 5 (lower is better)
Translates to: PEFVPTPAHEGVAAV*PAHREGKRLEPLDL
Trigger: CAGATCAAGAGGCTCCAAACGTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTGGGACGAATTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
ENST00000567471.1
CDS-3UTR CAA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGACCGGGAAGGTCTCCTaGAGGGTCTTGAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: HAEQALLRGTANGPLPSLTGKVS*RVLSCL
Trigger: CAGGCAGCTCAAGACCCTCAAGGAGACCTTCCCGGT...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354249.8
CDS-3UTR CAA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGACCGGGAAGGTCTCCTaGAGGGTCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: HAEQALLRGTANGPLPSLTGKVS*RVFLSC
Trigger: GCAGCTCAAGAAGACCCTCAAGGAGACCTTCCCGGT...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356120.9
CDS-3UTR CAA 90 bp TCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTAACGTTTGGAGCCTCTaGATCTGCACCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SCRTSFTQRNSKWPPPIPNVWSL*ICTRAA
Trigger: GGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGTT...AGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CAA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGGTGCATCGAGAAGCTTaGGGAGAACGCGGTCAGATC +
Preference number: 5 (lower is better)
Translates to: HAEQALLRGTANGPLPSLVHREA*GERGQI
Trigger: GATCTGACCGCGTTCTCCCAAAGCTTCTCGATGCAC...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS-3UTR CAA 90 bp CATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCCATCCCTGTCCTTGAGGGTCTTCTaGAGCTGCCTGAATTCGTCC +
Preference number: 5 (lower is better)
Translates to: HAEQALLRGTANGPLPSLSLRVF*SCLNSS
Trigger: GGACGAATTCAGGCAGCTCAAGAAGACCCTCAAGGA...CAGGGATGGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356120.9
CDS TCA 72 bp CCTGGCGCCGTGGGCGCCGCTCCAGGGCCCTGCGTGTaGCGGTGCAGCAGCGGCTCTGGATGGCGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: PGAVGAAPGPCV*RCSSGSGWRPA
Trigger: CGCCGGGCGCCATCCAGAGCCGCTGCTGCACCGTCACACGCAGGGCCCTGGAGCGGCGCCCACGGCGCCAGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
ENST00000569739.1
CDS GCA 72 bp GCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTaGGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAA +
Preference number: 6 (lower is better)
Translates to: AHARPRGHGQLI*AAALVGAGSTE
Trigger: TTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
ENST00000569739.1
CDS CCA 72 bp TCCAGGGCCCTGCGTGTGACGGTGCAGCAGCGGCTCTaGATGGCGCCCGGCGAAGGTCGGGTGGGCACGGTG +
Preference number: 6 (lower is better)
Translates to: SRALRVTVQQRL*MAPGEGRVGTV
Trigger: CACCGTGCCCACCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTGCACCGTCACACGCAGGGCCCTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
ENST00000569739.1
CDS GCA 72 bp GCGCCCCCGCGGGCACGGACAGCTCATCTGCGCGGCTaGTCTCGTAGGCGCGGGAAGCACAGAACTGGGGAC +
Preference number: 6 (lower is better)
Translates to: APPRARTAHLRG*SRRRGKHRTGD
Trigger: GTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
ENST00000569739.1
CDS GCA 72 bp CATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTaGGGCACAGAGTCCACGCACCCTCGAGGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: HRDPRAHCSVVG*GTESTHPRGRP
Trigger: GGGCCGCCCTCGAGGGTGCGTGGACTCTGTGCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000569739.1
CDS GCA 72 bp TGGATGGAGAGGCGGCCCGCAGCGCGAGAAAGAGGCTaGTCCTCTGGGGTGGGCAGGATCACCCGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: WMERRPAARERG*SSGVGRITRLP
Trigger: CGGCAGCCGGGTGATCCTGCCCACCCCAGAGGAGCAGCCTCTTTCTCGCGCTGCGGGCCGCCTCTCCATCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 72 bp TTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACAGTGGTGCATCCAGGC +
Preference number: 6 (lower is better)
Translates to: FPTAAGAPGRGS*APRVPTVVHPG
Trigger: GCCTGGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTGGAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397280.8
ENST00000566005.5
CDS CAA 90 bp CCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGAGAAGCTTaGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCG +
Preference number: 6 (lower is better)
Translates to: PPSPLPYPGWPDREA*GERGQISAAGPPPP
Trigger: CGGTGGAGGCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CAA 90 bp GGGCGGGAACCAGGGCATTGGTCTTCCAGAGCCCACTGTGCACCCTaGAGAGGGCGGGGTCCCTCACCCGGATGGCAGGGGCTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: GREPGHWSSRAHCAP*RGRGPSPGWQGLGA
Trigger: AGCTCCCAGCCCCTGCCATCCGGGTGAGGGACCCCGCCCTCTCAAGGGTGCACAGTGGGCTCTGGAAGACCAATGCCCTGGTTCCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS TCA 72 bp GCTCCAGGTCCAGGGGTTGCGGTGCGAAGAAGCCAGTaGTCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCG +
Preference number: 6 (lower is better)
Translates to: APGPGVAVRRSQ*SSGSVPRALQS
Trigger: CGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCTTCTTCGCACCGCAACCCCTGGACCTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 72 bp TTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACAGTGGTGCATCGAGAA +
Preference number: 6 (lower is better)
Translates to: FPTAAGAPGRGS*APRVPTVVHRE
Trigger: TTCTCGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTGGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354249.8
ENST00000356120.9
CDS CCA 72 bp GCAGGCAGCGCAGGCTCTGAGCCTCCAGACTGTGGATaGAGAGGCGGCCCGCAGCGCGAGAAAGAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: AGSAGSEPPDCG*RGGPQREKEAA
Trigger: AGCAGCCTCTTTCTCGCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGAGGCTCAGAGCCTGCGCTGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS CCA 72 bp CGCTCCCGTACCCAGGCTGGCCTGACCGAGAAGCTTTaGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: RSRTQAGLTEKL*ENAVRSPQQAR
Trigger: GCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 72 bp GGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTaGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAG +
Preference number: 6 (lower is better)
Translates to: GKPPPSPLPYPG*PDREALGERGQ
Trigger: CTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGGTGGCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 72 bp GGCGCGGGAAGCACAGAACTGGGGACCTGGTGGGAGTaGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACG +
Preference number: 6 (lower is better)
Translates to: GAGSTELGTWWE*VFGVTAGPQRT
Trigger: CGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTCCCGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS CAA 72 bp CCGCTCCCGTACCCAGGCTGGCCTGACCGAGAAGCTTaGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: PLPYPGWPDREA*GERGQISAAGP
Trigger: CGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CAA 90 bp CGCGTCCCAACAGTGGTGCATCCAGGCTGGCCTGACCGAGAAGCTTaGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCG +
Preference number: 6 (lower is better)
Translates to: RVPTVVHPGWPDREA*GERGQISAAGPPPP
Trigger: CGGTGGAGGCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGATGCACCACTGTTGGGACGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397280.8
ENST00000566005.5
CDS TCA 72 bp GCCACCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTaGCCGAGAAGCTTTGGGAGAACGCGGTCAGATCTC +
Preference number: 6 (lower is better)
Translates to: ATAFPAPVPRLA*PRSFGRTRSDL
Trigger: GAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS GCA 72 bp TTGCGGTGCGAAGAAGCCAGTGATCGTCGGGCTCCGTaGCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGA +
Preference number: 6 (lower is better)
Translates to: LRCEEASDRRAP*HALCSRQQPPR
Trigger: TCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCTTCTTCGCACCGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 72 bp TTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTaGGCCCCACGCGTCCCAACAGTGGTGCATCTTAAG +
Preference number: 6 (lower is better)
Translates to: FPTAAGAPGRGS*APRVPTVVHLK
Trigger: CTTAAGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 72 bp GGGCTGGGAGCTTCAGCAGGGACGAAGGGCCTCCAGTaGGAGTCACTGATGGGAGGCAGTCCAGTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: GLGASAGTKGLQ*ESLMGGSPVGG
Trigger: GCCTCCCACTGGACTGCCTCCCATCAGTGACTCCCACTGGAGGCCCTTCGTCCCTGCTGAAGCTCCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 72 bp AAGCACAGAACTGGGGACCTGGTGGGAGTGGGTGTTTaGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: KHRTGDLVGVGV*SHRGATEDEAR
Trigger: GCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS CCA 72 bp CTCGTAGGCGCGGGAAGCACAGAACTGGGGACCTGGTaGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAG +
Preference number: 6 (lower is better)
Translates to: LVGAGSTELGTW*EWVFGVTAGPQ
Trigger: CTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS CAA 72 bp GAAGCACAGAACTGGGGACCTGGTGGGAGTGGGTGTTaGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCG +
Preference number: 6 (lower is better)
Translates to: EAQNWGPGGSGC*ESPRGHRGRGP
Trigger: CGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569739.1
CDS CAA 90 bp GGGAAGCCGCCACCGCGGCATCAGGGTGGCCCAGGGTCACTCACCTaGAGCTGCCTGAATTCGTCCCAACTCCTGCGCACGAAGGTGTCG +
Preference number: 6 (lower is better)
Translates to: GKPPPRHQGGPGSLT*SCLNSSQLLRTKVS
Trigger: CGACACCTTCGTGCGCAGGAGTTGGGACGAATTCAGGCAGCTCAAGGTGAGTGACCCTGGGCCACCCTGATGCCGCGGTGGCGGCTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS TCA 72 bp CGCAGCAGCACGTCCAGGCTCTCCTGGGCCTGCGCCTaGAAAGGCCTATCCCGCGTGTCCTGGGTACAGAAG +
Preference number: 6 (lower is better)
Translates to: RSSTSRLSWACA*KGLSRVSWVQK
Trigger: CTTCTGTACCCAGGACACGCGGGATAGGCCTTTTCAGGCGCAGGCCCAGGAGAGCCTGGACGTGCTGCTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000566005.5
CDS TCA 72 bp CCCGCCTCCACCGGGAAGGTCTCCTTGAGGGTCTTCTaGGGGCGGGAACCAGGGCATTGGTCTTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: PASTGKVSLRVF*GREPGHWSSRA
Trigger: GGCTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTTCCCGGTGGAGGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CCA 72 bp CAGTGGTGCATCCAGGCTGGCCTGACCGAGAAGCTTTaGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: QWCIQAGLTEKL*ENAVRSPQQAR
Trigger: GCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGATGCACCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397280.8
ENST00000566005.5
CDS CAA 90 bp CGGGAAGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATaGGTCTTCCAGAGCCCACTGTGCACCCTTGAGAGGGCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: REGLLEGLLRAGTRA*VFQSPLCTLERAGS
Trigger: GGACCCCGCCCTCTCAAGGGTGCACAGTGGGCTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS CAA 72 bp ACAGTGGTGCATCCAGGCTGGCCTGACCGAGAAGCTTaGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: TVVHPGWPDREA*GERGQISAAGP
Trigger: CGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGATGCACCACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397280.8
ENST00000566005.5
CDS GCA 72 bp GAAGCCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTaGAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: EASDRRAPCHAL*SRQQPPRIGFQ
Trigger: TTGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
CDS GCA 72 bp CGGCATCAGGGTGGCCCAGGGTCACTCACCTTGAGCTaGCTGAATTCGTCCCAACTCCTGCGCACGAAGGTG +
Preference number: 6 (lower is better)
Translates to: RHQGGPGSLTLS*LNSSQLLRTKV
Trigger: CACCTTCGTGCGCAGGAGTTGGGACGAATTCAGGCAGCTCAAGGTGAGTGACCCTGGGCCACCCTGATGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS TCA 72 bp GTCCCAACTCCTGCGCACGAAGGTGTCGCTGCCGTCTaGCCAGCGCACAGAGAAGGCAAACGTTTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: VPTPAHEGVAAV*PAHREGKRLEP
Trigger: AGGCTCCAAACGTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
ENST00000567471.1
CDS GCA 72 bp GTTTGGAGCCTCTTGATCTGCACCAGGGCTGCCCCTTaGACTGAAACTGGGTATCGGGGGCCTGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: VWSLLICTRAAP*TETGYRGPAMA
Trigger: AGCCATGGCAGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
ENST00000567471.1
CDS CCA 72 bp GCACTGAAACTGGGTATCGGGGGCCTGCCATGGCTGTaGCTTCCAGGCTGCAGATTCCTGAAATGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: ALKLGIGGLPWL*LPGCRFLKWAR
Trigger: CCTCGCCCATTTCAGGAATCTGCAGCCTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCAGTTTCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000563181.1
ENST00000567471.1
CDS CAA 72 bp CTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATaGGTCTTCCAGAGCCCACTGTGCACCCTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: LLEGLLRAGTRA*VFQSPLCTLER
Trigger: CCTCTCAAGGGTGCACAGTGGGCTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS GCA 72 bp GGAAGAAGAAGAATGAGCTTTCCAGCCCTGGAGGCGTaGAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGAC +
Preference number: 6 (lower is better)
Translates to: GRRRMSFPALEA*KTEEGAKGRRD
Trigger: GTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGCCTCCAGGGCTGGAAAGCTCATTCTTCTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354249.8
CDS TCA 72 bp CAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTaGTACGCCGCTTTGGGCTTCACTGGTCCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: QWCILRHHKNVL*YAALGFTGPWR
Trigger: GCGCCAGGGACCAGTGAAGCCCAAAGCGGCGTATCACAGTACGTTTTTGTGGTGCCTTAAGATGCACCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563181.1
CDS GCA 72 bp CGCACAGAGAAGGCAAACGTTTGGAGCCTCTTGATCTaGACCAGGGCTGCCCCTTGCACTGAAACTGGGTAT +
Preference number: 6 (lower is better)
Translates to: RTEKANVWSLLI*TRAAPCTETGY
Trigger: ATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGTTTGCCTTCTCTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354249.8
ENST00000356120.9
ENST00000397280.8
ENST00000563181.1
ENST00000566005.5
ENST00000567471.1