RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146909

Ensembl transcript IDs: ENST00000275820.4, ENST00000460332.1, ENST00000469271.1, ENST00000472491.1, ENST00000475176.1, ENST00000485661.1, ENST00000486131.1, ENST00000489850.5

Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACAAATGGGGCGTTTTGCCCAGGAGAGGCATCACCAGCACCTGTaGCCATCTGCCCAACGTGACCACTCTGAAGAGGACGGTGACTGC +
Preference number: 1 (lower is better)
Translates to: PQMGRFAQERHHQHL*PSAQRDHSEEDGDC
Trigger: GCAGTCACCGTCCTCTTCAGAGTGGTCACGTTGGGCAGATGGGCACAGGTGCTGGTGATGCCTCTCCTGGGCAAAACGCCCCATTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 90 bp GCACCACTCAAATGTGGGCCATTCACAGGCAGCCAGGGATCCTCTTaGTCCGTGAGGTTGGGGGCTTGCATCAGAATGCAAATCTACCGA +
Preference number: 1 (lower is better)
Translates to: APLKCGPFTGSQGSS*SVRLGACIRMQIYR
Trigger: TCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAATGGCCCACATTTGAGTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR GCA 90 bp TTCACAGGCAGCCAGGGATCCTCTTGGTCCGTGAGGTTGGGGGCTTaGATCAGAATGCAAATCTACCGAGGCGTGAAGCACAATTTAGTT +
Preference number: 1 (lower is better)
Translates to: FTGSQGSSWSVRLGA*IRMQIYRGVKHNLV
Trigger: AACTAAATTGTGCTTCACGCCTCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 90 bp CCCATAATTAATGCCTACTCACATCAAGTTAGCACCACTCAAATGTaGGCCATTCACAGGCAGCCAGGGATCCTCTTGGTCCGTGAGGTT +
Preference number: 1 (lower is better)
Translates to: PIINAYSHQVSTTQM*AIHRQPGILLVREV
Trigger: AACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAATGGCCCACATTTGAGTGGTGCTAACTTGATGTGAGTAGGCATTAATTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR GCA 90 bp CTGTGCCCATCTGCCCAACGTGACCACTCTGAAGAGGACGGTGACTaGTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTA +
Preference number: 1 (lower is better)
Translates to: LCPSAQRDHSEEDGD*WTDEFWTYITSQCL
Trigger: TAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTCAGAGTGGTCACGTTGGGCAGATGGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 90 bp TGCCCATCTGCCCAACGTGACCACTCTGAAGAGGACGGTGACTGCTaGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTC +
Preference number: 1 (lower is better)
Translates to: CPSAQRDHSEEDGDC*TDEFWTYITSQCLF
Trigger: GAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTCAGAGTGGTCACGTTGGGCAGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 90 bp CGTGACCACTCTGAAGAGGACGGTGACTGCTGGACAGATGAGTTTTaGACATATATAACCTCTCAATGTCTATTCTGTATTCACATCTTA +
Preference number: 1 (lower is better)
Translates to: RDHSEEDGDCWTDEF*TYITSQCLFCIHIL
Trigger: TAAGATGTGAATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTCAGAGTGGTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR TCA 90 bp TGCAAGCAAGTAGCACCTATTAACAGTCAAATAACTACTGTTTGGTaGCCTCAGAGTTGTTTAAGATGGTACATTTACAATCTGGAATTG +
Preference number: 1 (lower is better)
Translates to: CKQVAPINSQITTVW*PQSCLRWYIYNLEL
Trigger: CAATTCCAGATTGTAAATGTACCATCTTAAACAACTCTGAGGTCACCAAACAGTAGTTATTTGACTGTTAATAGGTGCTACTTGCTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR GCA 90 bp GCAGGCAGTAACTATATTTTCTTCATGTTTACATCTCCAAATCCTTaGAAGCAAGTAGCACCTATTAACAGTCAAATAACTACTGTTTGG +
Preference number: 1 (lower is better)
Translates to: AGSNYIFFMFTSPNP*KQVAPINSQITTVW
Trigger: CCAAACAGTAGTTATTTGACTGTTAATAGGTGCTACTTGCTTGCAAGGATTTGGAGATGTAAACATGAAGAAAATATAGTTACTGCCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 90 bp TGTGGGCCATTCACAGGCAGCCAGGGATCCTCTTGGTCCGTGAGGTaGGGGGCTTGCATCAGAATGCAAATCTACCGAGGCGTGAAGCAC +
Preference number: 2 (lower is better)
Translates to: CGPFTGSQGSSWSVR*GACIRMQIYRGVKH
Trigger: GTGCTTCACGCCTCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAATGGCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 90 bp AGCACCACTCAAATGTGGGCCATTCACAGGCAGCCAGGGATCCTCTaGGTCCGTGAGGTTGGGGGCTTGCATCAGAATGCAAATCTACCG +
Preference number: 2 (lower is better)
Translates to: STTQMWAIHRQPGIL*VREVGGLHQNANLP
Trigger: CGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAATGGCCCACATTTGAGTGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 90 bp ATTCACAGGCAGCCAGGGATCCTCTTGGTCCGTGAGGTTGGGGGCTaGCATCAGAATGCAAATCTACCGAGGCGTGAAGCACAATTTAGT +
Preference number: 2 (lower is better)
Translates to: IHRQPGILLVREVGG*HQNANLPRREAQFS
Trigger: ACTAAATTGTGCTTCACGCCTCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTCATCACCAGCACCTGTaGCCATCTGCCCAACGTGAC +
Preference number: 2 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCHHQHL*PSAQRD
Trigger: GTCACGTTGGGCAGATGGGCACAGGTGCTGGTGATG...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTGAACCCTGTCCAGTGTaGCTGACCCCTTTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFEPCPV*LTPFPS
Trigger: GGAGGGAAAAGGGGTCAGGCACACTGGACAGGGTTC...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCACACACCAGCCTCACTaGTTAGAGAACCCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: ATVVIVFPILVAAPIINATHQPH*LENPVQ
Trigger: CTGGACAGGGTTCTCTAAGCAGTGAGGCTGGTGTGT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTGTAATCCCAGCACTTTaGGAGGCCGAGATGGGTGTA +
Preference number: 2 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVVIPAL*EAEMGV
Trigger: TACACCCATCTCGGCCTCCCAAAGTGCTGGGATTAC...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR TCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTGATGGGTGTATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSDGCIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATACACCCATC...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTTCCAAGCAATTCTTGTaGCTCAGCCACCTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVSKQFL*LSHLSS
Trigger: GCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGA...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCGAAGAGGACGGTGACTaGTGGACAGATGAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: ATVVIVFPILVAAPIINAEEDGD*WTDEFW
Trigger: CCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTC...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCGAATCACATTTAAGCTaGGCGTGGTGGCTCAAGCCT +
Preference number: 2 (lower is better)
Translates to: ATVVIVFPILVAAPIINAESHLS*AWWLKP
Trigger: AGGCTTGAGCCACCACGCCCAGCTTAAATGTGATTC...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR TCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGACTCCTGACCTCAAGTaGTCCACCCGCAACCTCCCA +
Preference number: 2 (lower is better)
Translates to: LKDSCLVILYISSSQPALTPDLK*STRNLP
Trigger: TGGGAGGTTGCGGGTGGATCACTTGAGGTCAGGAGT...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTAGCCACCTCAGTAGCTaGTATTACCAGCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCSHLSS*YYQHVP
Trigger: TGGCACATGCTGGTAATAGCAGCTACTGAGGTGGCT...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTACAAATGGGGCGTTTTaGCCAGGAGAGGCATCACCA +
Preference number: 2 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFTNGAF*PGEASP
Trigger: TGGTGATGCCTCTCCTGGGCAAAACGCCCCATTTGT...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCTCCATACTTAGTGAGTaGGGTGTGTTTGTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: ATVVIVFPILVAAPIINASILSE*GVFVSP
Trigger: GGGAGAAACAAACACACCCCACTCACTAAGTATGGA...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTTATAATCCCGGTGTTTaGGAGGCCAAGGTAAGAGGA +
Preference number: 2 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSYNPGV*EAKVRG
Trigger: TCCTCTTACCTTGGCCTCCCAAACACCGGGATTATA...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTACGACACAGTCTCTGTaGTGCTTTCAGTTACTTTCT +
Preference number: 2 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVTTQSL*CFQLLS
Trigger: AGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGT...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR TCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCACAATCTGGAATTGGTaGGGAGATGAATATCCTCAA +
Preference number: 2 (lower is better)
Translates to: ATVVIVFPILVAAPIINATIWNW*GDEYPQ
Trigger: TTGAGGATATTCATCTCCTCACCAATTCCAGATTGT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR TCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTTTCAGTCCAGGAATTTaGTGCTGCGGTAACTATGAT +
Preference number: 2 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCFSPGI*CCGNYD
Trigger: ATCATAGTTACCGCAGCATCAAATTCCTGGACTGAA...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTGCTATTACCAGCATGTaGCATCATGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFAITSM*HHAWLI
Trigger: AATTAGCCAGGCATGATGGCACATGCTGGTAATAGC...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR TCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTGAGGTTGCAGTGAGCTaGGATTACAGGACACTGCAC +
Preference number: 2 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIEVAVS*DYRTLH
Trigger: GTGCAGTGTCCTGTAATCTCAGCTCACTGCAACCTC...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTACATCTCCAAATCCTTaGAAGCAAGTAGCACCTATT +
Preference number: 2 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSTSPNP*KQVAPI
Trigger: AATAGGTGCTACTTGCTTGCAAGGATTTGGAGATGT...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCATTAGTTTAGGGATATaGACAGATACTGATGACTTC +
Preference number: 2 (lower is better)
Translates to: ATVVIVFPILVAAPIINAISLGI*TDTDDF
Trigger: GAAGTCATCAGTATCTGTGCATATCCCTAAACTAAT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR TCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTATAACTACTGTTTGGTaGCCTCAGAGTTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFITTVW*PQSCLR
Trigger: TCTTAAACAACTCTGAGGTCACCAAACAGTAGTTAT...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTGGTATCTGCAATACATaGTGTTATCTAGGGACATTT +
Preference number: 2 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFGICNT*CYLGTF
Trigger: AAATGTCCCTAGATAACAGCATGTATTGCAGATACC...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTGTAGAGACAGGGTTTTaGCCAGGCTGGTTTCAAATT +
Preference number: 2 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIVETGF*PGWFQI
Trigger: AATTTGAAACCAGCCTGGGCAAAACCCTGTCTCTAC...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 90 bp AGAACTGATCTGTTACATCCCAATCACCACCCAGCAAAGACACTCTaGTTAAAAAGCTCCTTAACAAAGGGAAGATTTTCACTTAATTCA +
Preference number: 2 (lower is better)
Translates to: RTDLLHPNHHPAKTL*LKSSLTKGRFSLNS
Trigger: TGAATTAAGTGAAAATCTTCCCTTTGTTAAGGAGCTTTTTAACAAGAGTGTCTTTGCTGGGTGGTGATTGGGATGTAACAGATCAGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR GCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGCAGCATGTGCCATCATaGCTGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: LKDSCLVILYISSSQPALQHVPS*LANFYI
Trigger: AATATAAAAATTAGCCAGGCATGATGGCACATGCTG...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR GCA 72 bp GGGCGTTTTGCCCAGGAGAGGCATCACCAGCACCTGTaGCCATCTGCCCAACGTGACCACTCTGAAGAGGAC +
Preference number: 3 (lower is better)
Translates to: GRFAQERHHQHL*PSAQRDHSEED
Trigger: GTCCTCTTCAGAGTGGTCACGTTGGGCAGATGGGCACAGGTGCTGGTGATGCCTCTCCTGGGCAAAACGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR TCA 72 bp GGCCATTCACAGGCAGCCAGGGATCCTCTTGGTCCGTaGGGTTGGGGGCTTGCATCAGAATGCAAATCTACC +
Preference number: 3 (lower is better)
Translates to: GHSQAARDPLGP*GWGLASECKST
Trigger: GGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR GCA 72 bp AGCCAGGGATCCTCTTGGTCCGTGAGGTTGGGGGCTTaGATCAGAATGCAAATCTACCGAGGCGTGAAGCAC +
Preference number: 3 (lower is better)
Translates to: SQGSSWSVRLGA*IRMQIYRGVKH
Trigger: GTGCTTCACGCCTCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 72 bp AAATGTGGGCCATTCACAGGCAGCCAGGGATCCTCTTaGTCCGTGAGGTTGGGGGCTTGCATCAGAATGCAA +
Preference number: 3 (lower is better)
Translates to: KCGPFTGSQGSS*SVRLGACIRMQ
Trigger: TTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAATGGCCCACATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR GCA 72 bp CTGCAGCCTCTACCTCCAGGGTCCAAGCAATTCTTGTaGCTCAGCCACCTCAGTAGCTGCTATTACCAGCAT +
Preference number: 3 (lower is better)
Translates to: LQPLPPGSKQFL*LSHLSSCYYQH
Trigger: ATGCTGGTAATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTAGAGGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR TCA 72 bp AGGCTGAGGCAAAAGGACCGCTTCAGTCCAGGAATTTaGTGCTGCGGTAACTATGATCGTGCCACTGCACTC +
Preference number: 3 (lower is better)
Translates to: RLRQKDRFSPGI*CCGNYDRATAL
Trigger: GAGTGCAGTGGCACGATCATAGTTACCGCAGCATCAAATTCCTGGACTGAAGCGGTCCTTTTGCCTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 72 bp AATGCCTACTCACATCAAGTTAGCACCACTCAAATGTaGGCCATTCACAGGCAGCCAGGGATCCTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: NAYSHQVSTTQM*AIHRQPGILLV
Trigger: GACCAAGAGGATCCCTGGCTGCCTGTGAATGGCCCACATTTGAGTGGTGCTAACTTGATGTGAGTAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTTGTAATCCCAGCACTTaGGGAGGCCGAGATGGGTGT +
Preference number: 3 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCCNPST*GGRDGC
Trigger: ACACCCATCTCGGCCTCCCAAAGTGCTGGGATTACA...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTCACAAATGGGGCGTTTaGCCCAGGAGAGGCATCACC +
Preference number: 3 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFHKWGV*PRRGIT
Trigger: GGTGATGCCTCTCCTGGGCAAAACGCCCCATTTGTG...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR GCA 72 bp TCTGCCCAACGTGACCACTCTGAAGAGGACGGTGACTaGTGGACAGATGAGTTTTGGACATATATAACCTCT +
Preference number: 3 (lower is better)
Translates to: SAQRDHSEEDGD*WTDEFWTYITS
Trigger: AGAGGTTATATATGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTCAGAGTGGTCACGTTGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 72 bp GCCCAACGTGACCACTCTGAAGAGGACGGTGACTGCTaGACAGATGAGTTTTGGACATATATAACCTCTCAA +
Preference number: 3 (lower is better)
Translates to: AQRDHSEEDGDC*TDEFWTYITSQ
Trigger: TTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTCAGAGTGGTCACGTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTAGTAGAGACAGGGTTTaGCCCAGGCTGGTTTCAAAT +
Preference number: 3 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSSRDRV*PRLVSN
Trigger: ATTTGAAACCAGCCTGGGCAAAACCCTGTCTCTACT...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTATTCAGTTGTTCATGTaGCTTGCGCATGCTTCAAAG +
Preference number: 3 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVIQLFM*LAHASK
Trigger: CTTTGAAGCATGCGCAAGCAACATGAACAACTGAAT...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCAACAGAATAAGCCTTaGGGTTTACCAAGGACATTT +
Preference number: 3 (lower is better)
Translates to: ATVVIVFPILVAAPIINAQQNKP*GLPRTF
Trigger: AAATGTCCTTGGTAAACCCAAAGGCTTATTCTGTTG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTTTATGTCGACTGACTTaGCCAAAGTTAATTGCAACC +
Preference number: 3 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCLCRLT*PKLIAT
Trigger: GGTTGCAATTAACTTTGGCAAAGTCAGTCGACATAA...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTTCAAATAACTACTGTTaGGTGACCTCAGAGTTGTTT +
Preference number: 3 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVSNNYC*VTSELF
Trigger: AAACAACTCTGAGGTCACCAAACAGTAGTTATTTGA...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTCCAGCAAAGACACTCTaGTTAAAAAGCTCCTTAACA +
Preference number: 3 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFPAKTL*LKSSLT
Trigger: TGTTAAGGAGCTTTTTAACAAGAGTGTCTTTGCTGG...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR-3UTR CAA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTTTGGTGACCTCAGAGTaGTTTAAGATGGTACATTTA +
Preference number: 3 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISLVTSE*FKMVHL
Trigger: TAAATGTACCATCTTAAACAACTCTGAGGTCACCAA...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CCA 72 bp TCTGAAGAGGACGGTGACTGCTGGACAGATGAGTTTTaGACATATATAACCTCTCAATGTCTATTCTGTATT +
Preference number: 3 (lower is better)
Translates to: SEEDGDCWTDEF*TYITSQCLFCI
Trigger: AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR TCA 72 bp GTAGCACCTATTAACAGTCAAATAACTACTGTTTGGTaGCCTCAGAGTTGTTTAAGATGGTACATTTACAAT +
Preference number: 3 (lower is better)
Translates to: VAPINSQITTVW*PQSCLRWYIYN
Trigger: ATTGTAAATGTACCATCTTAAACAACTCTGAGGTCACCAAACAGTAGTTATTTGACTGTTAATAGGTGCTAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTGCCCGCGCCCGCCTCTaGGCTTCATGCGGACCACGC +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIARARL*ASCGPR
Trigger: GCGTGGTCCGCATGAAGCGCAGAGGCGGGCGCGGGC...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTCCGTGGCCTTGGCCTTaGCCCGGGACGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVPWPWP*PGTAAA
Trigger: AGCCGCGGCCGTCCCGGGTCAAGGCCAAGGCCACGG...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTCCTCTGCAGCCGGCGTaGTTTCCGCAGGTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIPLQPA*FPQVPL
Trigger: AAGCGGCACCTGCGGAAAGCACGCCGGCTGCAGAGG...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTGGGCCCGCCGTCCTCTaGAGCCGGCGTGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSGPAVL*SRRAFR
Trigger: GCGGAAAGCACGCCGGCTGCAGAGGACGGCGGGCCC...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTGTCCCGACTAGGGGCTaGGCGGGCGCGCTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSVPTRG*AGALLR
Trigger: ACGGAGGAGCGCGCCCGCCCAGCCCCTAGTCGGGAC...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 72 bp CAGCCAGGGATCCTCTTGGTCCGTGAGGTTGGGGGCTaGCATCAGAATGCAAATCTACCGAGGCGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QPGILLVREVGG*HQNANLPRREA
Trigger: TGCTTCACGCCTCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 72 bp TTCACAGGCAGCCAGGGATCCTCTTGGTCCGTGAGGTaGGGGGCTTGCATCAGAATGCAAATCTACCGAGGC +
Preference number: 4 (lower is better)
Translates to: FTGSQGSSWSVR*GACIRMQIYRG
Trigger: GCCTCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 72 bp CAAATGTGGGCCATTCACAGGCAGCCAGGGATCCTCTaGGTCCGTGAGGTTGGGGGCTTGCATCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: QMWAIHRQPGIL*VREVGGLHQNA
Trigger: TGCATTCTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTGGCTGCCTGTGAATGGCCCACATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTCGCCTCTGCGCTTCATaGGGACCACGCGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVRLCAS*GPRVPG
Trigger: CCCAGGGACGCGTGGTCCGCATGAAGCGCAGAGGCG...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTCCTTCCGAAGTCGCGTaGACGAACTCCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIPSEVA*TNSSTA
Trigger: AGCGGTGGAGGAGTTCGTGCACGCGACTTCGGAAGG...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTACGGCCGCGGCTTCCTaGGAGGCGAGGGGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISTAAAS*EARGPD
Trigger: GTCGGGACCCCTCGCCTCCCAGGAAGCCGCGGCCGT...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCGGAGGGTCTGGTCTTTaGGGTGGCGGCCGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAGGSGL*GGGRGL
Trigger: AAGGCCACGGCCGCCACCGCAAAGACCAGACCCTCC...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTGAACCCTGTCCAGTGTaGCTGACCCCTTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIEPCPV*LTPFPS
Trigger: GGAGGGAAAAGGGGTCAGGCACACTGGACAGGGTTC...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTCATCACCAGCACCTGTaGCCATCTGCCCAACGTGAC +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIHHQHL*PSAQRD
Trigger: GTCACGTTGGGCAGATGGGCACAGGTGCTGGTGATG...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTTCGTCGGCGCTTCTGTaGGCCTGTGCGTTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAISSALL*ACAFFS
Trigger: GCTAAAGAACGCACAGGCCCACAGAAGCGCCGACGA...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 72 bp TCACTGCAGCCTCTACCTCCAGGGTCCAAGCAATTCTaGTGCCTCAGCCACCTCAGTAGCTGCTATTACCAG +
Preference number: 4 (lower is better)
Translates to: SLQPLPPGSKQF*CLSHLSSCYYQ
Trigger: CTGGTAATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTAGAGGCTGCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTTGCAGGTGCGTATGGTaGCTGTTGTCGATCATCGGG +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAICRCVW*LLSIIG
Trigger: CCCGATGATCGACAACAGTCACCATACGCACCTGCA...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTTCGTCGTCCTCGCTCTaGGCTTCTGCTTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVSSSSL*ASASCA
Trigger: GGCGCAGGAAGCAGAAGCGCAGAGCGAGGACGACGA...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTCCTGCCGGTGACCGCTaGCTTCTTCGGCTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCPAGDR*LLRLRF
Trigger: GAAGCGGAGCCGAAGAAGCCAGCGGTCACCGGCAGG...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTGTCTGGTCTTTGCGGTaGCGGCCGTGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCVWSLR*RPWPWP
Trigger: AGGCCAAGGCCACGGCCGCCACCGCAAAGACCAGAC...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTCAGGCTGGAGTGCAATaGCACGATCTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIQAGVQ*HDLCSL
Trigger: CAGTGAGCAGAGATCGTGCCATTGCACTCCAGCCTG...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTTCCGTGTCCTGCCGGTaGCCGCTGGCTTCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFSVSCR*PLASSA
Trigger: AGCCGAAGAAGCCAGCGGTCACCGGCAGGACACGGA...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTCTGCGTCTCAGAACCTaGGCCGGCGTTGCGGACCAA +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSLRLRT*AGVADQ
Trigger: TTGGTCCGCAACGCCGGCTCAGGTTCTGAGACGCAG...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTGCCTGGGTGACAGAGTaGGCCTGTCTCTCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIAWVTE*ACLSLK
Trigger: TTTAAGAGAGAGACAGGCTCACTCTGTCACCCAGGC...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTTCTGTGTTCATCCTCTaGTTCCGGGCGAGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAISVFIL*FRASSR
Trigger: CCTAGAACTCGCCCGGAAGCAGAGGATGAACACAGA...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTCCTCTCCCGCGCTCCTaGACGCCGCCATCTTTCGAA +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCPLPRS*TPPSFE
Trigger: TTCGAAAGATGGCGGCGTCCAGGAGCGCGGGAGAGG...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTCGCTGCCTGCCCCGCTaGCTTTGGTCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFRCLPR*LWSGLQ
Trigger: CTGAAGCCCAGACCAAAGCCAGCGGGGCAGGCAGCG...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCTCAGCGGCACGGAGCTaGTGCCGTCCTTCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINASAARS*CRPSFC
Trigger: GCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGA...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTGTCAAGACCGTCGCGTaGAAAGCTCAGCGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSVKTVA*KAQRHG
Trigger: TCCGTGCCGCTGAGCTTTGCACGCGACGGTCTTGAC...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTCACCAGCGACCCGTCTaGTCCGCACTCAAGACACTG +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSHQRPV*SALKTL
Trigger: CAGTGTCTTGAGTGCGGAGCAGACGGGTCGCTGGTG...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCACCGTCCCCACAAGCTaGTTCTGCAGGTGCGTATGG +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINATVPTS*FCRCVW
Trigger: CCATACGCACCTGCAGAAGCAGCTTGTGGGGACGGT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTGAAGAGGACGGTGACTaGTGGACAGATGAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIEEDGD*WTDEFW
Trigger: CCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTC...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTACTCCTGACCTCAAGTaGTCCACCCGCAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSTPDLK*STRNLP
Trigger: TGGGAGGTTGCGGGTGGATCACTTGAGGTCAGGAGT...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTGCGGCACGGAGCTGCTaGCGTCCTTCTTTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFAARSC*RPSFCA
Trigger: AGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGC...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCGTTCCCAGGCTGGAGTaGAATGGCACGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAVPRLE*NGTISA
Trigger: AGCAGAGATCGTGCCATTGCACTCCAGCCTGGGAAC...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTCTCGGGGTCATAGCCTaGAATTTTGCGCATGTCATT +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAILGVIA*NFAHVI
Trigger: AATGACATGCGCAAAATTCCAGGCTATGACCCCGAG...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTCCTCCAGCTGCCCACTaGTGGAAGCCATGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFPPAAH*WKPCWV
Trigger: AACCCAACATGGCTTCCATCAGTGGGCAGCTGGAGG...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGATCCTGGTCTGGTCCTaGAACTCGCTGCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALILVWS*NSLPAP
Trigger: CGGGGCAGGCAGCGAGTTTCAGGACCAGACCAGGAT...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTAGCGGCGGTGGCGGCTaGGGAGGGTCTGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCISGGGG*GGSGLC
Trigger: GCAAAGACCAGACCCTCCGCAGCCGCCACCGCCGCT...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTCCTCCTCCTCACCACTaGTGTCGTACAAGCCGCTAT +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSPPPHH*CRTSRY
Trigger: ATAGCGGCTTGTACGACAGCAGTGGTGAGGAGGAGG...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTTACAGTTCCTCCAGCTaGCCACTGATGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVYSSSS*PLMEAM
Trigger: CATGGCTTCCATCAGTGGGCAGCTGGAGGAACTGTA...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGGGTCCTGAAACTCGCTaGCTGCCCCGCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALGPETR*LPRWLW
Trigger: CCAAAGCCAGCGGGGCAGGCAGCGAGTTTCAGGACC...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTAGTCAAAGGGCCACCTaGCCTCCTTCCTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISSQRAT*PPSFPD
Trigger: GTCAGGGAAGGAAGGAGGGCAGGTGGCCCTTTGACT...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTGTAGAGACAGGGTTTTaGCCAGGCTGGTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIVETGF*PGWFQI
Trigger: AATTTGAAACCAGCCTGGGCAAAACCCTGTCTCTAC...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGGCTCCATCATCAGTCTaGTGGGCATGGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALAPSSV*WAWPRQ
Trigger: CTGCCTCGGCCATGCCCAGCAGACTGATGATGGAGC...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTAGCCACCTCAGTAGCTaGTATTACCAGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVSHLSS*YYQHVP
Trigger: TGGCACATGCTGGTAATAGCAGCTACTGAGGTGGCT...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCATGTCCTTTCTGCTGTaGGCCATGTACAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAMSFLL*AMYSSS
Trigger: GGAGGAACTGTACATGGCCCACAGCAGAAAGGACAT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTACTGCCTCCAGAAAGTaGGCACCGACCTCGATTCCA +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFTASRK*APTSIP
Trigger: TGGAATCGAGGTCGGTGCCCACTTTCTGGAGGCAGT...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTCCGCTGGCTTTGGTCTaGGCTTCAGTGATCAATTCC +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSPLALV*ASVINS
Trigger: GGAATTGATCACTGAAGCCCAGACCAAAGCCAGCGG...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTGTAATCCCAGCACTTTaGGAGGCCGAGATGGGTGTA +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSVIPAL*EAEMGV
Trigger: TACACCCATCTCGGCCTCCCAAAGTGCTGGGATTAC...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCGAGGACGGTGACTGCTaGACAGATGAGTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAEDGDC*TDEFWT
Trigger: TGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTC...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTATTTGTCCCATATGCTaGACTGGAAAGTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIICPIC*TGKSSE
Trigger: TTCAGATGACTTTCCAGTTCAGCATATGGGACAAAT...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTGAGGTTGCAGTGAGCTaGGATTACAGGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFEVAVS*DYRTLH
Trigger: GTGCAGTGTCCTGTAATCTCAGCTCACTGCAACCTC...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTACAATCTGGAATTGGTaGGGAGATGAATATCCTCAA +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAITIWNW*GDEYPQ
Trigger: TTGAGGATATTCATCTCCTCACCAATTCCAGATTGT...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGAACCTGAGCCGGCGTTaGGGACCAAAGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALNLSRR*GPKLSA
Trigger: TGCAGAGAGCTTTGGTCCGCAACGCCGGCTCAGGTT...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTACACAGTCTCTGTGCTaGTTTCAGTTACTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAITQSLC*FQLLSV
Trigger: TACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGT...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCTCCTCACTTTCGTCCTaGGAGTCACTCTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINASSLSS*ESLSKS
Trigger: TGACTTAGAGAGTGACTCCCAGGACGAAAGTGAGGA...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTAGCACCACTCAAATGTaGGCCATTCACAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISSTTQM*AIHRQP
Trigger: TGGCTGCCTGTGAATGGCCCACATTTGAGTGGTGCT...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTTCAGCTTGCCTCACATaGGGTGGGATGTACTTTTCA +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCSACLT*GGMYFS
Trigger: TGAAAAGTACATCCCACCTCATGTGAGGCAAGCTGA...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTTGTGGTGAAGGATGCTaGCTAAGAGAACATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSCGEGC*LREHAP
Trigger: TGGAGCATGTTCTCTTAGTCAGCATCCTTCACCACA...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGCCCTCCTTCCTTCCCTaGCTACATTCTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALPSFLP*LHSQGS
Trigger: GCTTCCCTGAGAATGTAGTCAGGGAAGGAAGGAGGG...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTAGAAGACATAGGGTTTaGATCTGGCTTCGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSRRHRV*IWLRVE
Trigger: TTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCT...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTTTTTGTTTCTGCTTTTaGGAGTTTCACTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YLQGPSNSCASATSVAAIFCFCF*EFHSCS
Trigger: GGAACAAGAGTGAAACTCTCAAAAGCAGAAACAAAA...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCATTCATGTCCTTTCTaGTGTGGGCCATGTACAGTT +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAHSCPF*CGPCTV
Trigger: AACTGTACATGGCCCACAGCAGAAAGGACATGAATG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTCAGGAGACGCGAAGCTaGGTCTCAGAACCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIQETRS*VSEPEP
Trigger: CGGCTCAGGTTCTGAGACGCAGCTTCGCGTCTCCTG...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTTCCAAGCAATTCTTGTaGCTCAGCCACCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFSKQFL*LSHLSS
Trigger: GCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGA...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTGAATCACATTTAAGCTaGGCGTGGTGGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFESHLS*AWWLKP
Trigger: AGGCTTGAGCCACCACGCCCAGCTTAAATGTGATTC...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTTATAATCCCGGTGTTTaGGAGGCCAAGGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCYNPGV*EAKVRG
Trigger: TCCTCTTACCTTGGCCTCCCAAACACCGGGATTATA...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCCAACTGTGTGGTaGAGGATGCTGACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCIPTVW*RMLTKR
Trigger: TCTCTTAGTCAGCATCCTTCACCACACAGTTGGAAT...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGGATGGGTGTATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALDGCIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATACACCCATC...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCTTCAGTCCAGGAATTTaGTGCTGCGGTAACTATGAT +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAFSPGI*CCGNYD
Trigger: ATCATAGTTACCGCAGCATCAAATTCCTGGACTGAA...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTGCATATGGTACATCATaGAATCAGGTGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISAYGTS*NQVVPL
Trigger: CAGTGGCACCACCTGATTTCATGATGTACCATATGC...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTCGTGCTTTCCGCAGGTaGCGCTTCTCCTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIRAFRR*RFSFLS
Trigger: ACTGAGGAAGGAGAAGCGGCACCTGCGGAAAGCACG...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCTTCAGTTGTTCATGTTaGTTGCGCATGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAFSCSC*LRMLQS
Trigger: GCTTTGAAGCATGCGCAAGCAACATGAACAACTGAA...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTTTGCCTCACATGAGGTaGGATGTACTTTTCACCACT +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCLPHMR*DVLFTT
Trigger: AGTGGTGAAAAGTACATCCCACCTCATGTGAGGCAA...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTTCCATACTTAGTGAGTaGGGTGTGTTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSSILSE*GVFVSP
Trigger: GGGAGAAACAAACACACCCCACTCACTAAGTATGGA...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTCACAGTAAGACCTTCTaGAGGAAGGAAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFHSKTF*RKEAVC
Trigger: ACACACTGCTTCCTTCCTCCAGAAGGTCTTACTGTG...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTCATCATGAAATCAGGTaGTGCCACTGTCGTGATAGT +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCHHEIR*CHCRDS
Trigger: ACTATCACGACAGTGGCACCACCTGATTTCATGATG...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 72 bp TACCAAACATTCACACGCAGGCAACAGAATAAGCCTTaGGGTTTACCAAGGACATTTTACAGTCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: YQTFTRRQQNKP*GLPRTFYSQRA
Trigger: GGCCCTTTGACTGTAAAATGTCCTTGGTAAACCCAAAGGCTTATTCTGTTGCCTGCGTGTGAATGTTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTGTTCTTCCTTTTTCTTaGAGTCCACTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFVLPFS*SPLSPQ
Trigger: CTGAGGAGACAGTGGACTTCAAGAAAAAGGAAGAAC...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTTCAAAATGTCGAAGATaGGGAGAGACTGTACCACGT +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFSKCRR*GETVPR
Trigger: ACGTGGTACAGTCTCTCCTCATCTTCGACATTTTGA...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTCTGACTAAGAGAACATaGTCCATCATCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISLTKRT*SIISLL
Trigger: CAGCAGACTGATGATGGAGCATGTTCTCTTAGTCAG...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTGAACTTCCTCACCACTaGCTCCAGAAAGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIELPHH*LQKVGT
Trigger: GGTGCCCACTTTCTGGAGGCAGTGGTGAGGAAGTTC...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTTTGCAGACACTTCGTTaGAAGGTCAGCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISLQTLR*KVSFLS
Trigger: AGAGAGAAAGCTGACCTTGCAACGAAGTGTCTGCAA...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTGCTATTACCAGCATGTaGCATCATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISAITSM*HHAWLI
Trigger: AATTAGCCAGGCATGATGGCACATGCTGGTAATAGC...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTCGCAACCTCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIRNLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGAGGTTGCG...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCTTCCGTATTTATAGATaGCATCGAACTTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAFRIYR*HRTSSP
Trigger: TGGTGAGGAAGTTCGATGCCATCTATAAATACGGAA...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTTGGAAGTTGTATAAATaGGCAATGACGGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSWKLYK*AMTVNR
Trigger: CCTGTTCACCGTCATTGCCCATTTATACAACTTCCA...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTAGAGAAATTCGTAGCTaGCAAGTTTTCCAAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFREIRS*QVFQVP
Trigger: CGGGACTTGGAAAACTTGCCAGCTACGAATTTCTCT...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTTCTCTCTCAGCACGTTaGCTTCGTCGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCISLSAR*LRRRFC
Trigger: ACAGAAGCGCCGACGAAGCCAACGTGCTGAGAGAGA...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTAAGTGGGCCACCAGATaGACCAAATTAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFKWATR*TKLEKF
Trigger: GAATTTCTCTAATTTGGTTCATCTGGTGGCCCACTT...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTCGGACCAAAGCTCTCTaGAGTTTCCTCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIRTKAL*SFLSFS
Trigger: GGAGAAGCTGAGGAAACTGCAGAGAGCTTTGGTCCG...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCAGCATGTGCCATCATaGCTGGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAQHVPS*LANFYI
Trigger: AATATAAAAATTAGCCAGGCATGATGGCACATGCTG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTACATCTCCAAATCCTTaGAAGCAAGTAGCACCTATT +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCTSPNP*KQVAPI
Trigger: AATAGGTGCTACTTGCTTGCAAGGATTTGGAGATGT...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTACAAATGGGGCGTTTTaGCCAGGAGAGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCITNGAF*PGEASP
Trigger: TGGTGATGCCTCTCCTGGGCAAAACGCCCCATTTGT...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTGACTTACAGGCAATCTaGCATGTACTAAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCDLQAI*HVLNAN
Trigger: GTTTGCATTTAGTACATGGCAGATTGCCTGTAAGTC...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTAGGTGCCTGCCACCATaGCCAGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISRCLPP*PANFYI
Trigger: AATATAAAAATTAGCTGGGCATGGTGGCAGGCACCT...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCAACTACCTTTAAGATaGAAAGGGAAAGCGATTTTG +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAQLPLR*KGKAIL
Trigger: CAAAATCGCTTTCCCTTTCCATCTTAAAGGTAGTTG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATCATCTTTCCTCAATaGAAAACCCACGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCIIFPQ*KTHVFQ
Trigger: CTGAAAAACGTGGGTTTTTCATTGAGGAAAGATGAT...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR TCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGCAATCCATGAGAACGTaGATGATTTCTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALQSMRT*MISLSC
Trigger: GCAGGAGAGAGAAATCATTCACGTTCTCATGGATTG...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTTGCCGTCCTTCTTTTTaGGCTTGTTCAAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCICRPSF*ACSNRG
Trigger: GCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCA...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TTAGAAGTCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTGGTATCTGCAATACATaGTGTTATCTAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: LEVCRDDTVSVLLSVTFCGICNT*CYLGTF
Trigger: AAATGTCCCTAGATAACAGCATGTATTGCAGATACC...ACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTATTAGTTTAGGGATATaGACAGATACTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVISLGI*TDTDDF
Trigger: GAAGTCATCAGTATCTGTGCATATCCCTAAACTAAT...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCTTCTTTAGCAAGAAGTaGCTGATGAAAAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ATVVIVFPILVAAPIINAFFSKK*LMKSFK
Trigger: TTTGAAGCTTTTCATCAGCCACTTCTTGCTAAAGAA...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTTGGACAGATGAGTTTTaGACATATATAACCTCTCAA +
Preference number: 4 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVWTDEF*TYITSQ
Trigger: TTGAGAGGTTATATATGTCCAAAACTCATCTGTCCA...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CCA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTTCTGTACCTCAAACATaGGTTACTGCATATGGTACA +
Preference number: 4 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFSVPQT*VTAYGT
Trigger: TGTACCATATGCAGTAACCCATGTTTGAGGTACAGA...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGCTTTTCTTCATCTTCTaGAAAACGGACTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALLFFIF*KTDSLP
Trigger: GGGAAGAGAGTCCGTTTTGCAGAAGATGAAGAAAAG...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGACGACACAGTCTCTGTaGTGCTTTCAGTTACTTTCT +
Preference number: 4 (lower is better)
Translates to: LKDSCLVILYISSSQPALTTQSL*CFQLLS
Trigger: AGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGT...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 72 bp CTGTTACATCCCAATCACCACCCAGCAAAGACACTCTaGTTAAAAAGCTCCTTAACAAAGGGAAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: LLHPNHHPAKTL*LKSSLTKGRFS
Trigger: TGAAAATCTTCCCTTTGTTAAGGAGCTTTTTAACAAGAGTGTCTTTGCTGGGTGGTGATTGGGATGTAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR GCA 90 bp TGCTGGACAGATGAGTTTTGGACATATATAACCTCTCAATGTCTATTCTGTATTCATGAAATCAGGTGGTaGCACTGTCGTGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: CWTDEFWTYITSQCLFCIHEIRW*HCRDSF
Trigger: AAAACTATCACGACAGTGGCACCACCTGATTTCATG...AATACAGAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
3UTR CAA 72 bp CTGCTTTCAGTTACTTTCTGTATTCAGTTGTTCATGTaGCTTGCGCATGCTTCAAAGCTTAAACCATTAGTT +
Preference number: 4 (lower is better)
Translates to: LLSVTFCIQLFM*LAHASKLKPLV
Trigger: AACTAATGGTTTAAGCTTTGAAGCATGCGCAAGCAACATGAACAACTGAATACAGAAAGTAACTGAAAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS TCA 90 bp CTGCGGAGGGTCTGGTCTTTGCGGTGGCGGCCGTGGCCTTGGCCTTaGCCCGGGACGGCCGCGGCTTCCTGGGAGGCGAGGGGTCCCGAC +
Preference number: 5 (lower is better)
Translates to: LRRVWSLRWRPWPWP*PGTAAASWEARGPD
Trigger: GTCGGGACCCCTCGCCTCCCAGGAAGCCGCGGCCGTCCCGGGTCAAGGCCAAGGCCACGGCCGCCACCGCAAAGACCAGACCCTCCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp CTTCGGCCTCCCAGGCCGGGACCCTGTTCGGGGCCCGCCGTCCTCTaGAGCCGGCGTGCTTTCCGCAGGTGCCGCTTCTCCTTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LRPPRPGPCSGPAVL*SRRAFRRCRFSFLS
Trigger: ACTGAGGAAGGAGAAGCGGCACCTGCGGAAAGCACGCCGGCTGCAGAGGACGGCGGGCCCCGAACAGGGTCCCGGCCTGGGAGGCCGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp CCGCGCCCCTCGCAACCCCCGGGAGCCTCGCCTTCCGAAGTCGCGTaGACGAACTCCTCCACCGCTAGCTTCAGCCTCTTCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PRPSQPPGASPSEVA*TNSSTASFSLFRAF
Trigger: GAAGGCCCTGAAGAGGCTGAAGCTAGCGGTGGAGGAGTTCGTGCACGCGACTTCGGAAGGCGAGGCTCCCGGGGGTTGCGAGGGGCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp CAGGCCGGGACCCTGTTCGGGGCCCGCCGTCCTCTGCAGCCGGCGTaGTTTCCGCAGGTGCCGCTTCTCCTTCCTCAGTTCCTTACGGCT +
Preference number: 5 (lower is better)
Translates to: QAGTLFGARRPLQPA*FPQVPLLLPQFLTA
Trigger: AGCCGTAAGGAACTGAGGAAGGAGAAGCGGCACCTGCGGAAAGCACGCCGGCTGCAGAGGACGGCGGGCCCCGAACAGGGTCCCGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp CCCGTCTGCTCCGCACTCAAGACACTGTCCCAGGAGACGCGAAGCTaGGTCTCAGAACCTGAGCCGGCGTTGCGGACCAAAGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PVCSALKTLSQETRS*VSEPEPALRTKALC
Trigger: GCAGAGAGCTTTGGTCCGCAACGCCGGCTCAGGTTCTGAGACGCAGCTTCGCGTCTCCTGGGACAGTGTCTTGAGTGCGGAGCAGACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275820.4
ENST00000469271.1
ENST00000472491.1
ENST00000475176.1
ENST00000489850.5
CDS TCA 90 bp CTTAGGAAGCAGATCAAGCGTCGCACGCGTACCCTGGTCTGGTCCTaGAACTCGCTGCCTGCCCCGCTGGCTTTGGTCTGGGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LRKQIKRRTRTLVWS*NSLPAPLALVWASV
Trigger: CACTGAAGCCCAGACCAAAGCCAGCGGGGCAGGCAGCGAGTTTCAGGACCAGACCAGGGTACGCGTGCGACGCTTGATCTGCTTCCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475176.1
CDS GCA 90 bp CGCGTGCAAAGCTCAGCGGCACGGAGCTGCTGCCGTCCTTCTTTTTaGGCTTGTTCAAACCGAGGCAACGCTCCAGCTTTCGGATCTCTC +
Preference number: 5 (lower is better)
Translates to: RVQSSAARSCCRPSF*ACSNRGNAPAFGSL
Trigger: GAGAGATCCGAAAGCTGGAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp CAAGCGTCGCACGCGTACCCTGGTCTGGTCCTGAAACTCGCTGCCTaGCCCGCTGGCTTTGGTCTGGGCTTCAGTGATCAATTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: QASHAYPGLVLKLAA*PAGFGLGFSDQFLK
Trigger: CTTAAGGAATTGATCACTGAAGCCCAGACCAAAGCCAGCGGGGCAGGCAGCGAGTTTCAGGACCAGACCAGGGTACGCGTGCGACGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475176.1
CDS CCA 90 bp AGCTTTAGGGACTTAGGAAGCAGATCAAGCGTCGCACGCGTACCCTaGTCTGGTCCTGAAACTCGCTGCCTGCCCCGCTGGCTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: SFRDLGSRSSVARVP*SGPETRCLPRWLWS
Trigger: AGACCAAAGCCAGCGGGGCAGGCAGCGAGTTTCAGGACCAGACCAGGGTACGCGTGCGACGCTTGATCTGCTTCCTAAGTCCCTAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475176.1
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCGTGGCGGCCGTGGCCTaGGCCTTGACCCGGGACGGC +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINAVAAVA*ALTRDG
Trigger: GCCGTCCCGGGTCAAGGCCAAGGCCACGGCCGCCAC...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp CACTTTCGGGGAGTGTCTGTCCGGCATCTTCCTCCTCCTCACCACTaGTGTCGTACAAGCCGCTATTTTTCCCAGACTCCAGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: HFRGVSVRHLPPPHH*CRTSRYFSQTPGLP
Trigger: TGGGAGCCCTGGAGTCTGGGAAAAATAGCGGCTTGTACGACAGCAGTGGTGAGGAGGAGGAAGATGCCGGACAGACACTCCCCGAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp TATAGTCAAGACCGTCGCGTGCAAAGCTCAGCGGCACGGAGCTGCTaGCGTCCTTCTTTTTGCGCTTGTTCAAACCGAGGCAACGCTCCA +
Preference number: 5 (lower is better)
Translates to: YSQDRRVQSSAARSC*RPSFCACSNRGNAP
Trigger: TGGAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCGACGGTCTTGACTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS TCA 90 bp CAGAGAACCAGTCACTGGCAGAGCCTGGGAAACCGTGACCATGAGTaGCACAGAATCTGGGACAGGGAAGGACATGAGGGGATAACGAGG +
Preference number: 5 (lower is better)
Translates to: QRTSHWQSLGNRDHE*HRIWDREGHEGITR
Trigger: CCTCGTTATCCCCTCATGTCCTTCCCTGTCCCAGATTCTGTGTCACTCATGGTCACGGTTTCCCAGGCTCTGCCAGTGACTGGTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS GCA 90 bp GAATATAGTCAAGACCGTCGCGTGCAAAGCTCAGCGGCACGGAGCTaGTGCCGTCCTTCTTTTTGCGCTTGTTCAAACCGAGGCAACGCT +
Preference number: 5 (lower is better)
Translates to: EYSQDRRVQSSAARS*CRPSFCACSNRGNA
Trigger: AGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCGACGGTCTTGACTATATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 90 bp GAACACATAGTGAAGCCACAGCCGCTGGGGGAGAAAACACTCATGTaGGAGGCTTCTCAGTCGTGGTTCAACCTCAGGGCAAGCGACGAT +
Preference number: 5 (lower is better)
Translates to: EHIVKPQPLGEKTLM*EASQSWFNLRASDD
Trigger: ATCGTCGCTTGCCCTGAGGTTGAACCACGACTGAGAAGCCTCCCACATGAGTGTTTTCTCCCCCAGCGGCTGTGGCTTCACTATGTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CCA 90 bp CCAAACTGTACTTCAGTGTCACTGAATAGAACTGTGAGGTCTACGTaGGCGGATGGCACCAAGTCCACTCTCGGGCAACGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PNCTSVSLNRTVRST*ADGTKSTLGQRPSV
Trigger: CACAGAGGGGCGTTGCCCGAGAGTGGACTTGGTGCCATCCGCCCACGTAGACCTCACAGTTCTATTCAGTGACACTGAAGTACAGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS TCA 90 bp GTGGGAGGCTTCTCAGTCGTGGTTCAACCTCAGGGCAAGCGACGATaGATAAAACAGAGAACCAGTCACTGGCAGAGCCTGGGAAACCGT +
Preference number: 5 (lower is better)
Translates to: VGGFSVVVQPQGKRR*IKQRTSHWQSLGNR
Trigger: ACGGTTTCCCAGGCTCTGCCAGTGACTGGTTCTCTGTTTTATTCATCGTCGCTTGCCCTGAGGTTGAACCACGACTGAGAAGCCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CCA 90 bp CTTGCAGACACTTCGTTGCAAGGTCAGCTTTCTCTCTCAGCACGTTaGCTTCGTCGGCGCTTCTGTGGGCCTGTGCGTTCTTTAGCAAGA +
Preference number: 5 (lower is better)
Translates to: LADTSLQGQLSLSAR*LRRRFCGPVRSLAR
Trigger: TCTTGCTAAAGAACGCACAGGCCCACAGAAGCGCCGACGAAGCCAACGTGCTGAGAGAGAAAGCTGACCTTGCAACGAAGTGTCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS GCA 90 bp CCCTTCGCTTCCGTATTTATAGATGGCATCGAACTTCCTCACCACTaGCTCCAGAAAGTGGGCACCGACCTCGATTCCAACTGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: PFASVFIDGIELPHH*LQKVGTDLDSNCVV
Trigger: CACCACACAGTTGGAATCGAGGTCGGTGCCCACTTTCTGGAGGCAGTGGTGAGGAAGTTCGATGCCATCTATAAATACGGAAGCGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 90 bp GCTTCGTCGGCGCTTCTGTGGGCCTGTGCGTTCTTTAGCAAGAAGTaGCTGATGAAAAGCTTCAAACCCTCACGTAACACCCCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: ASSALLWACAFFSKK*LMKSFKPSRNTPSF
Trigger: AAAGCTGGGGGTGTTACGTGAGGGTTTGAAGCTTTTCATCAGCCACTTCTTGCTAAAGAACGCACAGGCCCACAGAAGCGCCGACGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTCCTGCCCCGCTGGCTTaGGTCTGGGCTTCAGTGATC +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVPAPLA*VWASVI
Trigger: GATCACTGAAGCCCAGACCAAAGCCAGCGGGGCAGG...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTGAACCTGAGCCGGCGTaGCGGACCAAAGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVEPEPA*RTKALC
Trigger: GCAGAGAGCTTTGGTCCGCAACGCCGGCTCAGGTTC...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 90 bp CGGGCGAGTTCTAGGATCTTTGAACTGACCTGGAAGCACGATGAATaGACAAGTCATACGCATGTCTCCATGCAAACTGCCTCCCGAGAG +
Preference number: 5 (lower is better)
Translates to: RASSRIFELTWKHDE*TSHTHVSMQTASRE
Trigger: CTCTCGGGAGGCAGTTTGCATGGAGACATGCGTATGACTTGTCCATTCATCGTGCTTCCAGGTCAGTTCAAAGATCCTAGAACTCGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCACAAATGGGGCGTTTaGCCCAGGAGAGGCATCACC +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINAHKWGV*PRRGIT
Trigger: GGTGATGCCTCTCCTGGGCAAAACGCCCCATTTGTG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS TCA 90 bp CTGTGTTCATCCTCTGCTTCCGGGCGAGTTCTAGGATCTTTGAACTaGCCTGGAAGCACGATGAATGGACAAGTCATACGCATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LCSSSASGRVLGSLN*PGSTMNGQVIRMSP
Trigger: TGGAGACATGCGTATGACTTGTCCATTCATCGTGCTTCCAGGTCAGTTCAAAGATCCTAGAACTCGCCCGGAAGCAGAGGATGAACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS GCA 90 bp TCATTCATGTCCTTTCTGCTGTGGGCCATGTACAGTTCCTCCAGCTaGCCACTGATGGAAGCCATGTTGGGTTCACTCAACCTGTTAAGT +
Preference number: 5 (lower is better)
Translates to: SFMSFLLWAMYSSSS*PLMEAMLGSLNLLS
Trigger: ACTTAACAGGTTGAGTGAACCCAACATGGCTTCCATCAGTGGGCAGCTGGAGGAACTGTACATGGCCCACAGCAGAAAGGACATGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCACTGTCTCCTCAGCTaGCCTCACATGAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINAHCLLS*PHMRWD
Trigger: ATCCCACCTCATGTGAGGCAAGCTGAGGAGACAGTG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 90 bp TTTTATCCCGAATTCCGTAACTGTGGACTGAAGGATGAGAAGACCTaGATGTGGGTCTGTGTGGTCTTCAGCAAGTTCCTGGAACCCTGT +
Preference number: 5 (lower is better)
Translates to: FYPEFRNCGLKDEKT*MWVCVVFSKFLEPC
Trigger: ACAGGGTTCCAGGAACTTGCTGAAGACCACACAGACCCACATGCAGGTCTTCTCATCCTTCAGTCCACAGTTACGGAATTCGGGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460332.1
CDS CCA 90 bp TTCATCCTCTGCTTCCGGGCGAGTTCTAGGATCTTTGAACTGACCTaGAAGCACGATGAATGGACAAGTCATACGCATGTCTCCATGCAA +
Preference number: 5 (lower is better)
Translates to: FILCFRASSRIFELT*KHDEWTSHTHVSMQ
Trigger: TTGCATGGAGACATGCGTATGACTTGTCCATTCATCGTGCTTCCAGGTCAGTTCAAAGATCCTAGAACTCGCCCGGAAGCAGAGGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CCA 90 bp TGTGGCCGGCCACAGCCACCGTTGAGAACAACTCAGCAGTGTAAGTaGAATTCCCGGGTCATACACCTTATGAATCAGAAATTCAGTATC +
Preference number: 5 (lower is better)
Translates to: CGRPQPPLRTTQQCK*NSRVIHLMNQKFSI
Trigger: GATACTGAATTTCTGATTCATAAGGTGTATGACCCGGGAATTCCACTTACACTGCTGAGTTGTTCTCAACGGTGGCTGTGGCCGGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486131.1
CDS-3UTR CAA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTTGTACCACGTGGAAGTaGTATAAATGGGCAATGACG +
Preference number: 5 (lower is better)
Translates to: YLQGPSNSCASATSVAAICTTWK*YKWAMT
Trigger: CGTCATTGCCCATTTATACAACTTCCACGTGGTACA...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTTTCTCTCTCAGCACGTaGGCTTCGTCGGCGCTTCTG +
Preference number: 5 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISFSLST*ASSALL
Trigger: CAGAAGCGCCGACGAAGCCAACGTGCTGAGAGAGAA...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS TCA 90 bp TGTGCTGTTCTGGTACATTTTATCCCGAATTCCGTAACTGTGGACTaGAGGATGAGAAGACCTGCATGTGGGTCTGTGTGGTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: CAVLVHFIPNSVTVD*RMRRPACGSVWSSA
Trigger: TGCTGAAGACCACACAGACCCACATGCAGGTCTTCTCATCCTTCAGTCCACAGTTACGGAATTCGGGATAAAATGTACCAGAACAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460332.1
CDS TCA 90 bp AACAGCAATGACTGGAACATCACTCGACTTCCAAAGTTTAATGGCTaGTACCTTTCAGGGGAACATCTTCCCGCCTGGAAGGGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: NSNDWNITRLPKFNG*YLSGEHLPAWKGLV
Trigger: AACCAGACCCTTCCAGGCGGGAAGATGTTCCCCTGAAAGGTATCAGCCATTAAACTTTGGAAGTCGAGTGATGTTCCAGTCATTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485661.1
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTCTTGCAGACACTTCGTaGCAAGGTCAGCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVLADTS*QGQLSL
Trigger: GAGAGAAAGCTGACCTTGCAACGAAGTGTCTGCAAG...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCAGGGAAGCTTTTCCTaGCAGACACTTCGTTGCAAG +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINAQGSFS*QTLRCK
Trigger: CTTGCAACGAAGTGTCTGCAAGGAAAAGCTTCCCTG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTTGTAATCCCAGCACTTaGGGAGGCCGAGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISCNPST*GGRDGC
Trigger: ACACCCATCTCGGCCTCCCAAAGTGCTGGGATTACA...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTGAAGGAAGCAGTGTGTaGATTTATACCTTAGCCCAA +
Preference number: 5 (lower is better)
Translates to: YLQGPSNSCASATSVAAIEGSSV*IYTLAQ
Trigger: TTGGGCTAAGGTATAAATCAACACACTGCTTCCTTC...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 90 bp ATGTCGAAGATGAGGAGAGACTGTACCACGTGGAAGTTGTATAAATaGGCAATGACGGTGAACAGGTTGTCACACTCTTTCCCTTCGCTT +
Preference number: 5 (lower is better)
Translates to: MSKMRRDCTTWKLYK*AMTVNRLSHSFPSL
Trigger: AAGCGAAGGGAAAGAGTGTGACAACCTGTTCACCGTCATTGCCCATTTATACAACTTCCACGTGGTACAGTCTCTCCTCATCTTCGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000460332.1
CDS-3UTR CAA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTTCCTTCTTTTTGCGCTaGTTCAAACCGAGGCAACGC +
Preference number: 5 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSSFFLR*FKPRQR
Trigger: GCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGA...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTCTGATGGAAGCCATGTaGGGTTCACTCAACCTGTTA +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVLMEAM*GSLNLL
Trigger: TAACAGGTTGAGTGAACCCAACATGGCTTCCATCAG...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTATGACGGTGAACAGGTaGTCACACTCTTTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSMTVNR*SHSFPS
Trigger: CGAAGGGAAAGAGTGTGACAACCTGTTCACCGTCAT...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTTCCAAGTCCCGAAATTaGTCCCATATGCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVSKSRN*SHMLNW
Trigger: CCAGTTCAGCATATGGGACAAATTTCGGGACTTGGA...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTAGTAGAGACAGGGTTTaGCCCAGGCTGGTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVSRDRV*PRLVSN
Trigger: ATTTGAAACCAGCCTGGGCAAAACCCTGTCTCTACT...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 90 bp AGAATCTGGGACAGGGAAGGACATGAGGGGATAACGAGGGAAGTCTaGATGAAAAATGGGCTTGAATTTCCACAATGTGAAATCCATAGC +
Preference number: 5 (lower is better)
Translates to: RIWDREGHEGITREV*MKNGLEFPQCEIHS
Trigger: GCTATGGATTTCACATTGTGGAAATTCAAGCCCATTTTTCATCCAGACTTCCCTCGTTATCCCCTCATGTCCTTCCCTGTCCCAGATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCATTTTGCGCATGTCATaGTTCTTCAGGGCCAACATC +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINAILRMS*FFRANI
Trigger: GATGTTGGCCCTGAAGAACAATGACATGCGCAAAAT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTAAAGGGAAAGCGATTTaGTCTTCAACAAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVKGKAI*SSTSGP
Trigger: TGGCCCACTTGTTGAAGACAAAATCGCTTTCCCTTT...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTGTAACACCCCCAGCTTaGGGTTGTCAGATACTCTTG +
Preference number: 5 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISVTPPA*GCQILL
Trigger: CAAGAGTATCTGACAACCCAAAGCTGGGGGTGTTAC...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp TACCTCCAGGGTCCAAGCAATTCTTGTGCCTCAGCCACCTCAGTAGCTGCTATTAACAGCCCATATATGTaGGGTTTTTGTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: YLQGPSNSCASATSVAAINSPYM*GFCFCF
Trigger: AAAGCAGAAACAAAAACCCAACATATATGGGCTGTT...AATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 90 bp CAACAAGTGGGCCACCAGATGAACCAAATTAGAGAAATTCGTAGCTaGCAAGTTTTCCAAGTCCCGAAATTTGTCCCATATGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: QQVGHQMNQIREIRS*QVFQVPKFVPYAEL
Trigger: CAGTTCAGCATATGGGACAAATTTCGGGACTTGGAAAACTTGCCAGCTACGAATTTCTCTAATTTGGTTCATCTGGTGGCCCACTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000485661.1
CDS-3UTR CAA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGCTGCCGTCCTTCTTTTaGCGCTTGTTCAAACCGAGG +
Preference number: 5 (lower is better)
Translates to: LKDSCLVILYISSSQPALLPSFF*RLFKPR
Trigger: CCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAG...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCAAACGGACTCTGGGTTaGTCCAATTCACTGAATTCA +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINAKRTLG*SNSLNS
Trigger: TGAATTCAGTGAATTGGACAAACCCAGAGTCCGTTT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCAGTTGTTCATGTTGCTaGCGCATGCTTCAAAGCTTA +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINASCSCC*RMLQSL
Trigger: TAAGCTTTGAAGCATGCGCAAGCAACATGAACAACT...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS TCA 90 bp ATGGAAAGGGAAAGCGATTTTGTCTTCAACAAGTGGGCCACCAGATaGACCAAATTAGAGAAATTCGTAGCTGGCAAGTTTTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: MERESDFVFNKWATR*TKLEKFVAGKFSKS
Trigger: GGACTTGGAAAACTTGCCAGCTACGAATTTCTCTAATTTGGTTCATCTGGTGGCCCACTTGTTGAAGACAAAATCGCTTTCCCTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000485661.1
CDS TCA 90 bp ATAGCAATTTCTGTAAGGCCTCCAGATAAACCTTGTACATTTCAGTaGCCATTCAAGAACAGTAAGAGAGCTGCTCCAGGTAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: IAISVRPPDKPCTFQ*PFKNSKRAAPGKAR
Trigger: CCTGGCTTTACCTGGAGCAGCTCTCTTACTGTTCTTGAATGGTCACTGAAATGTACAAGGTTTATCTGGAGGCCTTACAGAAATTGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469271.1
ENST00000475176.1
ENST00000489850.5
CDS-3UTR CAA 90 bp CAGAACCTGCTAGAAGACATAGGGTTTGAATCTGGCTTCGGGTCGAATGATGTTCAACAGAATAAGCCTTaGGGTTTACCAAGGACATTT +
Preference number: 5 (lower is better)
Translates to: QNLLEDIGFESGFGSNDVQQNKP*GLPRTF
Trigger: AAATGTCCTTGGTAAACCCAAAGGCTTATTCTGTTG...AACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp GCCACTGTCGTGATAGTTTTTCCCATCTTAGTAGCCGCACCCATAATTAATGCCCCAGCAAAGACACTCTaGTTAAAAAGCTCCTTAACA +
Preference number: 5 (lower is better)
Translates to: ATVVIVFPILVAAPIINAPAKTL*LKSSLT
Trigger: TGTTAAGGAGCTTTTTAACAAGAGTGTCTTTGCTGG...GGCATTAATTATGGGTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTTTATGTCGACTGACTTaGCCAAAGTTAATTGCAACC +
Preference number: 5 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSLCRLT*PKLIAT
Trigger: GGTTGCAATTAACTTTGGCAAAGTCAGTCGACATAA...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGTCGGGTCGAATGATGTaGCTGAATGCAGGGTTAGAA +
Preference number: 5 (lower is better)
Translates to: LKDSCLVILYISSSQPALSGRMM*LNAGLE
Trigger: TTCTAACCCTGCATTCAGCAACATCATTCGACCCGA...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp TCTGTAGGGACGACACAGTCTCTGTGCTGCTTTCAGTTACTTTCTGTATTCAGTCTTCACTTGTCATTATaGTGCAGAATATGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SVGTTQSLCCFQLLSVFSLHLSL*CRICFS
Trigger: GGAGAAACATATTCTGCACAATAATGACAAGTGAAG...ACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp TCTGGAGGAAGGAAGCAGTGTGTTGATTTATACCTTAGCCCAAGCTCCTTATTTACTTTCTGTATTCAGTaGTTCATGTTGCTTGCGCAT +
Preference number: 5 (lower is better)
Translates to: SGGRKQCVDLYLSPSSLFTFCIQ*FMLLAH
Trigger: ATGCGCAAGCAACATGAACAACTGAATACAGAAAGT...AAATAAGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp ATCTGCAATACATGCTGTTATCTAGGGACATTTCTGCTTCCTCCCAGAATCAGTTACCTGTCACCTTATTaGTCCTCTAAATTCAGAACC +
Preference number: 5 (lower is better)
Translates to: ICNTCCYLGTFLLPPRISYLSPY*SSKFRT
Trigger: GGTTCTGAATTTAGAGGACAAATAAGGTGACAGGTA...ACTGATTCTGGGAGGAAGCAGAAATGTCCCTAGATAACAGCATGTATTGCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGATTCAGTTGTTCATGTaGCTTGCGCATGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: LKDSCLVILYISSSQPALIQLFM*LAHASK
Trigger: CTTTGAAGCATGCGCAAGCAACATGAACAACTGAAT...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS-3UTR CAA 90 bp CTGAAAGACAGCTGTTTAGTCATTCTATACATTAGCAGTTCTCAACCTGCATTGTTGGTGACCTCAGAGTaGTTTAAGATGGTACATTTA +
Preference number: 5 (lower is better)
Translates to: LKDSCLVILYISSSQPALLVTSE*FKMVHL
Trigger: TAAATGTACCATCTTAAACAACTCTGAGGTCACCAA...CAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACAGCTGTCTTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 90 bp GTGGCGGCTGCGGAGGGTCTGGTCTTTGCGGTGGCGGCCGTGGCCTaGGCCTTGACCCGGGACGGCCGCGGCTTCCTGGGAGGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: VAAAEGLVFAVAAVA*ALTRDGRGFLGGEG
Trigger: CCCCTCGCCTCCCAGGAAGCCGCGGCCGTCCCGGGTCAAGGCCAAGGCCACGGCCGCCACCGCAAAGACCAGACCCTCCGCAGCCGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp GGCGGGCGCGCTCCTCCGTGTCCTGCCGGTGACCGCTaGCTTCTTCGGCTCCGCTTCGGCCTCCCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: GGRAPPCPAGDR*LLRLRFGLPGR
Trigger: CCGGCCTGGGAGGCCGAAGCGGAGCCGAAGAAGCCAGCGGTCACCGGCAGGACACGGAGGAGCGCGCCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp CCCAGGCCGGGACCCTGTTCGGGGCCCGCCGTCCTCTaGAGCCGGCGTGCTTTCCGCAGGTGCCGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PRPGPCSGPAVL*SRRAFRRCRFS
Trigger: GGAGAAGCGGCACCTGCGGAAAGCACGCCGGCTGCAGAGGACGGCGGGCCCCGAACAGGGTCCCGGCCTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 90 bp GCTGCGGAGGGTCTGGTCTTTGCGGTGGCGGCCGTGGCCTTGGCCTaGACCCGGGACGGCCGCGGCTTCCTGGGAGGCGAGGGGTCCCGA +
Preference number: 6 (lower is better)
Translates to: AAEGLVFAVAAVALA*TRDGRGFLGGEGSR
Trigger: TCGGGACCCCTCGCCTCCCAGGAAGCCGCGGCCGTCCCGGGTCAAGGCCAAGGCCACGGCCGCCACCGCAAAGACCAGACCCTCCGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 72 bp GGTCTGGTCTTTGCGGTGGCGGCCGTGGCCTTGGCCTaGACCCGGGACGGCCGCGGCTTCCTGGGAGGCGAG +
Preference number: 6 (lower is better)
Translates to: GLVFAVAAVALA*TRDGRGFLGGE
Trigger: CTCGCCTCCCAGGAAGCCGCGGCCGTCCCGGGTCAAGGCCAAGGCCACGGCCGCCACCGCAAAGACCAGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 72 bp GCGGAGGGTCTGGTCTTTGCGGTGGCGGCCGTGGCCTaGGCCTTGACCCGGGACGGCCGCGGCTTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: AEGLVFAVAAVA*ALTRDGRGFLG
Trigger: TCCCAGGAAGCCGCGGCCGTCCCGGGTCAAGGCCAAGGCCACGGCCGCCACCGCAAAGACCAGACCCTCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp TCGCAACCCCCGGGAGCCTCGCCTTCCGAAGTCGCGTaGACGAACTCCTCCACCGCTAGCTTCAGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SQPPGASPSEVA*TNSSTASFSLF
Trigger: GAAGAGGCTGAAGCTAGCGGTGGAGGAGTTCGTGCACGCGACTTCGGAAGGCGAGGCTCCCGGGGGTTGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp CTCCAGGCGGACCCCACAATCCACCAGCGACCCGTCTaGTCCGCACTCAAGACACTGTCCCAGGAGACGCGA +
Preference number: 6 (lower is better)
Translates to: LQADPTIHQRPV*SALKTLSQETR
Trigger: TCGCGTCTCCTGGGACAGTGTCTTGAGTGCGGAGCAGACGGGTCGCTGGTGGATTGTGGGGTCCGCCTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275820.4
ENST00000469271.1
ENST00000472491.1
ENST00000475176.1
ENST00000489850.5
CDS TCA 72 bp CAGATCAAGCGTCGCACGCGTACCCTGGTCTGGTCCTaGAACTCGCTGCCTGCCCCGCTGGCTTTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: QIKRRTRTLVWS*NSLPAPLALVW
Trigger: CCAGACCAAAGCCAGCGGGGCAGGCAGCGAGTTTCAGGACCAGACCAGGGTACGCGTGCGACGCTTGATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475176.1
CDS GCA 72 bp CCCGCCGTCCTCTGCAGCCGGCGTGCTTTCCGCAGGTaGCGCTTCTCCTTCCTCAGTTCCTTACGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: PAVLCSRRAFRR*RFSFLSSLRLF
Trigger: AAAAAGCCGTAAGGAACTGAGGAAGGAGAAGCGGCACCTGCGGAAAGCACGCCGGCTGCAGAGGACGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp GACTTAGGAAGCAGATCAAGCGTCGCACGCGTACCCTaGTCTGGTCCTGAAACTCGCTGCCTGCCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: DLGSRSSVARVP*SGPETRCLPRW
Trigger: CCAGCGGGGCAGGCAGCGAGTTTCAGGACCAGACCAGGGTACGCGTGCGACGCTTGATCTGCTTCCTAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475176.1
CDS GCA 72 bp GACCGTCGCGTGCAAAGCTCAGCGGCACGGAGCTGCTaGCGTCCTTCTTTTTGCGCTTGTTCAAACCGAGGC +
Preference number: 6 (lower is better)
Translates to: DRRVQSSAARSC*RPSFCACSNRG
Trigger: GCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCGACGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp CTCCAGGGCTCCCAGAATATAGTCAAGACCGTCGCGTaGAAAGCTCAGCGGCACGGAGCTGCTGCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: LQGSQNIVKTVA*KAQRHGAAAVL
Trigger: AAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCGACGGTCTTGACTATATTCTGGGAGCCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp TCCGCACTCAAGACACTGTCCCAGGAGACGCGAAGCTaGGTCTCAGAACCTGAGCCGGCGTTGCGGACCAAA +
Preference number: 6 (lower is better)
Translates to: SALKTLSQETRS*VSEPEPALRTK
Trigger: TTTGGTCCGCAACGCCGGCTCAGGTTCTGAGACGCAGCTTCGCGTCTCCTGGGACAGTGTCTTGAGTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275820.4
ENST00000469271.1
ENST00000472491.1
ENST00000475176.1
ENST00000489850.5
CDS CCA 72 bp GCAAGGATGTGGGCCTTGGGAATTCCTACACACTGCTaGCAGAGGTGTGGCCGGCCACAGCCACCGTTGAGA +
Preference number: 6 (lower is better)
Translates to: ARMWALGIPTHC*QRCGRPQPPLR
Trigger: TCTCAACGGTGGCTGTGGCCGGCCACACCTCTGCCAGCAGTGTGTAGGAATTCCCAAGGCCCACATCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486131.1
CDS TCA 72 bp ACTGTCCCAGGAGACGCGAAGCTGCGTCTCAGAACCTaGGCCGGCGTTGCGGACCAAAGCTCTCTGCAGTTT +
Preference number: 6 (lower is better)
Translates to: TVPGDAKLRLRT*AGVADQSSLQF
Trigger: AAACTGCAGAGAGCTTTGGTCCGCAACGCCGGCTCAGGTTCTGAGACGCAGCTTCGCGTCTCCTGGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275820.4
ENST00000469271.1
ENST00000472491.1
ENST00000475176.1
ENST00000489850.5
CDS CCA 72 bp GGCCTTGGGAATTCCTACACACTGCTGGCAGAGGTGTaGCCGGCCACAGCCACCGTTGAGAACAACTCAGCA +
Preference number: 6 (lower is better)
Translates to: GLGNSYTLLAEV*PATATVENNSA
Trigger: TGCTGAGTTGTTCTCAACGGTGGCTGTGGCCGGCCACACCTCTGCCAGCAGTGTGTAGGAATTCCCAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486131.1
CDS CAA 90 bp GCAAAGCTCAGCGGCACGGAGCTGCTGCCGTCCTTCTTTTTGCGCTaGTTCAAACCGAGGCAACGCTCCAGCTTTCGGATCTCTCGGTCC +
Preference number: 6 (lower is better)
Translates to: AKLSGTELLPSFFLR*FKPRQRSSFRISRS
Trigger: GGACCGAGAGATCCGAAAGCTGGAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 90 bp TCGCGTGCAAAGCTCAGCGGCACGGAGCTGCTGCCGTCCTTCTTTTaGCGCTTGTTCAAACCGAGGCAACGCTCCAGCTTTCGGATCTCT +
Preference number: 6 (lower is better)
Translates to: SRAKLSGTELLPSFF*RLFKPRQRSSFRIS
Trigger: AGAGATCCGAAAGCTGGAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp AGCTCAGCGGCACGGAGCTGCTGCCGTCCTTCTTTTTaGGCTTGTTCAAACCGAGGCAACGCTCCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: SSAARSCCRPSF*ACSNRGNAPAF
Trigger: GAAAGCTGGAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp CAAGACCGTCGCGTGCAAAGCTCAGCGGCACGGAGCTaGTGCCGTCCTTCTTTTTGCGCTTGTTCAAACCGA +
Preference number: 6 (lower is better)
Translates to: QDRRVQSSAARS*CRPSFCACSNR
Trigger: TCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCGACGGTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp GTGAAGCCACAGCCGCTGGGGGAGAAAACACTCATGTaGGAGGCTTCTCAGTCGTGGTTCAACCTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: VKPQPLGEKTLM*EASQSWFNLRA
Trigger: TGCCCTGAGGTTGAACCACGACTGAGAAGCCTCCCACATGAGTGTTTTCTCCCCCAGCGGCTGTGGCTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CAA 72 bp AGCGGCACGGAGCTGCTGCCGTCCTTCTTTTTGCGCTaGTTCAAACCGAGGCAACGCTCCAGCTTTCGGATC +
Preference number: 6 (lower is better)
Translates to: SGTELLPSFFLR*FKPRQRSSFRI
Trigger: GATCCGAAAGCTGGAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 72 bp CACTTCGTTGCAAGGTCAGCTTTCTCTCTCAGCACGTaGGCTTCGTCGGCGCTTCTGTGGGCCTGTGCGTTC +
Preference number: 6 (lower is better)
Translates to: HFVARSAFSLST*ASSALLWACAF
Trigger: GAACGCACAGGCCCACAGAAGCGCCGACGAAGCCAACGTGCTGAGAGAGAAAGCTGACCTTGCAACGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS TCA 72 bp ATCGTCTCTAGCATAAACCGAATCCTGGTCTGGTCCTaGAACTCGCTGCCTGCCCCGCTGGCTTTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: IVSSINRILVWS*NSLPAPLALVW
Trigger: CCAGACCAAAGCCAGCGGGGCAGGCAGCGAGTTTCAGGACCAGACCAGGATTCGGTTTATGCTAGAGACGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp ACTTCGTTGCAAGGTCAGCTTTCTCTCTCAGCACGTTaGCTTCGTCGGCGCTTCTGTGGGCCTGTGCGTTCT +
Preference number: 6 (lower is better)
Translates to: TSLQGQLSLSAR*LRRRFCGPVRS
Trigger: AGAACGCACAGGCCCACAGAAGCGCCGACGAAGCCAACGTGCTGAGAGAGAAAGCTGACCTTGCAACGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS CAA 72 bp AAGCTCAGCGGCACGGAGCTGCTGCCGTCCTTCTTTTaGCGCTTGTTCAAACCGAGGCAACGCTCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: KLSGTELLPSFF*RLFKPRQRSSF
Trigger: AAAGCTGGAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 90 bp CCTTGCAGACACTTCGTTGCAAGGTCAGCTTTCTCTCTCAGCACGTaGGCTTCGTCGGCGCTTCTGTGGGCCTGTGCGTTCTTTAGCAAG +
Preference number: 6 (lower is better)
Translates to: PCRHFVARSAFSLST*ASSALLWACAFFSK
Trigger: CTTGCTAAAGAACGCACAGGCCCACAGAAGCGCCGACGAAGCCAACGTGCTGAGAGAGAAAGCTGACCTTGCAACGAAGTGTCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS GCA 72 bp GGAGTGTCTGTCCGGCATCTTCCTCCTCCTCACCACTaGTGTCGTACAAGCCGCTATTTTTCCCAGACTCCA +
Preference number: 6 (lower is better)
Translates to: GVSVRHLPPPHH*CRTSRYFSQTP
Trigger: TGGAGTCTGGGAAAAATAGCGGCTTGTACGACAGCAGTGGTGAGGAGGAGGAAGATGCCGGACAGACACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp TCTACGTCTCCCTCCTCCTCCTCCTCACTTTCGTCCTaGGAGTCACTCTCTAAGTCACTTTCGGGGAGTGTC +
Preference number: 6 (lower is better)
Translates to: STSPSSSSSLSS*ESLSKSLSGSV
Trigger: GACACTCCCCGAAAGTGACTTAGAGAGTGACTCCCAGGACGAAAGTGAGGAGGAGGAGGAGGGAGACGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp TTCTCTCTCAGCACGTTGGCTTCGTCGGCGCTTCTGTaGGCCTGTGCGTTCTTTAGCAAGAAGTGGCTGATG +
Preference number: 6 (lower is better)
Translates to: FSLSTLASSALL*ACAFFSKKWLM
Trigger: CATCAGCCACTTCTTGCTAAAGAACGCACAGGCCCACAGAAGCGCCGACGAAGCCAACGTGCTGAGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS CCA 72 bp ACTTCAGTGTCACTGAATAGAACTGTGAGGTCTACGTaGGCGGATGGCACCAAGTCCACTCTCGGGCAACGC +
Preference number: 6 (lower is better)
Translates to: TSVSLNRTVRST*ADGTKSTLGQR
Trigger: GCGTTGCCCGAGAGTGGACTTGGTGCCATCCGCCCACGTAGACCTCACAGTTCTATTCAGTGACACTGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CAA 90 bp TTTCCAGAGCTAAGAAATGAACACCTGTTGGCAAGGATGTGGGCCTaGGGAATTCCTACACACTGCTGGCAGAGGTGTGGCCGGCCACAG +
Preference number: 6 (lower is better)
Translates to: FPELRNEHLLARMWA*GIPTHCWQRCGRPQ
Trigger: CTGTGGCCGGCCACACCTCTGCCAGCAGTGTGTAGGAATTCCCAAGGCCCACATCCTTGCCAACAGGTGTTCATTTCTTAGCTCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486131.1
CDS GCA 72 bp TCCTTTCTGCTGTGGGCCATGTACAGTTCCTCCAGCTaGCCACTGATGGAAGCCATGTTGGGTTCACTCAAC +
Preference number: 6 (lower is better)
Translates to: SFLLWAMYSSSS*PLMEAMLGSLN
Trigger: GTTGAGTGAACCCAACATGGCTTCCATCAGTGGGCAGCTGGAGGAACTGTACATGGCCCACAGCAGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 90 bp TCCCTGACTACATTCTCAGGGAAGCTTTTCCTTGCAGACACTTCGTaGCAAGGTCAGCTTTCTCTCTCAGCACGTTGGCTTCGTCGGCGC +
Preference number: 6 (lower is better)
Translates to: SLTTFSGKLFLADTS*QGQLSLSARWLRRR
Trigger: GCGCCGACGAAGCCAACGTGCTGAGAGAGAAAGCTGACCTTGCAACGAAGTGTCTGCAAGGAAAAGCTTCCCTGAGAATGTAGTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS GCA 72 bp TCCGTATTTATAGATGGCATCGAACTTCCTCACCACTaGCTCCAGAAAGTGGGCACCGACTTGGCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: SVFIDGIELPHH*LQKVGTDLAQP
Trigger: TGGCTGAGCCAAGTCGGTGCCCACTTTCTGGAGGCAGTGGTGAGGAAGTTCGATGCCATCTATAAATACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460332.1
CDS CCA 72 bp TTTCCTCAGCTTCTCCACGGGCTCGGGGTCATAGCCTaGAATTTTGCGCATGTCATTGTTCTTCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: FPQLLHGLGVIA*NFAHVIVLQGQ
Trigger: TTGGCCCTGAAGAACAATGACATGCGCAAAATTCCAGGCTATGACCCCGAGCCCGTGGAGAAGCTGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275820.4
ENST00000469271.1
ENST00000472491.1
ENST00000475176.1
ENST00000489850.5
CDS CCA 72 bp CGTAACTGTGGACTGAAGGATGAGAAGACCTGCATGTaGGTCTGTGTGGTCTTCAGCAAGTTCCTGGAACCC +
Preference number: 6 (lower is better)
Translates to: RNCGLKDEKTCM*VCVVFSKFLEP
Trigger: GGGTTCCAGGAACTTGCTGAAGACCACACAGACCCACATGCAGGTCTTCTCATCCTTCAGTCCACAGTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460332.1
CDS CCA 72 bp CCAGAGCTAAGAAATGAACACCTGTTGGCAAGGATGTaGGCCTTGGGAATTCCTACACACTGCTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: PELRNEHLLARM*ALGIPTHCWQR
Trigger: CCTCTGCCAGCAGTGTGTAGGAATTCCCAAGGCCCACATCCTTGCCAACAGGTGTTCATTTCTTAGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486131.1
CDS TCA 72 bp TCCTCTGCTTCCGGGCGAGTTCTAGGATCTTTGAACTaGCCTGGAAGCACGATGAATGGACAAGTCATACGC +
Preference number: 6 (lower is better)
Translates to: SSASGRVLGSLN*PGSTMNGQVIR
Trigger: GCGTATGACTTGTCCATTCATCGTGCTTCCAGGTCAGTTCAAAGATCCTAGAACTCGCCCGGAAGCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS GCA 72 bp TCCGTATTTATAGATGGCATCGAACTTCCTCACCACTaGCTCCAGAAAGTGGGCACCGACCTCGATTCCAAC +
Preference number: 6 (lower is better)
Translates to: SVFIDGIELPHH*LQKVGTDLDSN
Trigger: GTTGGAATCGAGGTCGGTGCCCACTTTCTGGAGGCAGTGGTGAGGAAGTTCGATGCCATCTATAAATACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp GCGCTTCTGTGGGCCTGTGCGTTCTTTAGCAAGAAGTaGCTGATGAAAAGCTTCAAACCCTCACGTAACACC +
Preference number: 6 (lower is better)
Translates to: ALLWACAFFSKK*LMKSFKPSRNT
Trigger: GGTGTTACGTGAGGGTTTGAAGCTTTTCATCAGCCACTTCTTGCTAAAGAACGCACAGGCCCACAGAAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000486131.1
CDS TCA 72 bp AGAAAGTGGGCACCGACCTCGATTCCAACTGTGTGGTaGAGGATGCTGACTAAGAGAACATGCTCCATCATC +
Preference number: 6 (lower is better)
Translates to: RKWAPTSIPTVW*RMLTKRTCSII
Trigger: GATGATGGAGCATGTTCTCTTAGTCAGCATCCTTCACCACACAGTTGGAATCGAGGTCGGTGCCCACTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS GCA 72 bp AGCACGATGAATGGACAAGTCATACGCATGTCTCCATaGAAACTGCCTCCCGAGAGGTGCCAAACTGTACTT +
Preference number: 6 (lower is better)
Translates to: STMNGQVIRMSP*KLPPERCQTVL
Trigger: AAGTACAGTTTGGCACCTCTCGGGAGGCAGTTTGCATGGAGACATGCGTATGACTTGTCCATTCATCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CCA 72 bp TGCTTCCGGGCGAGTTCTAGGATCTTTGAACTGACCTaGAAGCACGATGAATGGACAAGTCATACGCATGTC +
Preference number: 6 (lower is better)
Translates to: CFRASSRIFELT*KHDEWTSHTHV
Trigger: GACATGCGTATGACTTGTCCATTCATCGTGCTTCCAGGTCAGTTCAAAGATCCTAGAACTCGCCCGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS TCA 72 bp CTGGTACATTTTATCCCGAATTCCGTAACTGTGGACTaGAGGATGAGAAGACCTGCATGTGGGTCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: LVHFIPNSVTVD*RMRRPACGSVW
Trigger: CCACACAGACCCACATGCAGGTCTTCTCATCCTTCAGTCCACAGTTACGGAATTCGGGATAAAATGTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460332.1
CDS GCA 72 bp CAGAATATGTTTCTCCGGATGTCTGTGTTCATCCTCTaGTTCCGGGCGAGTTCTAGGATCTTTGAACTGACC +
Preference number: 6 (lower is better)
Translates to: QNMFLRMSVFIL*FRASSRIFELT
Trigger: GGTCAGTTCAAAGATCCTAGAACTCGCCCGGAAGCAGAGGATGAACACAGACATCCGGAGAAACATATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275820.4
ENST00000469271.1
ENST00000472491.1
CDS CCA 72 bp GAAGTCCACTGTCTCCTCAGCTTGCCTCACATGAGGTaGGATGTACTTTTCACCACTTCCACAAAGACTCTT +
Preference number: 6 (lower is better)
Translates to: EVHCLLSLPHMR*DVLFTTSTKTL
Trigger: AAGAGTCTTTGTGGAAGTGGTGAAAAGTACATCCCACCTCATGTGAGGCAAGCTGAGGAGACAGTGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CAA 90 bp ACCCGATTTAAGAAGCTATTTCCAGAGCTAAGAAATGAACACCTGTaGGCAAGGATGTGGGCCTTGGGAATTCCTACACACTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: TRFKKLFPELRNEHL*ARMWALGIPTHCWQ
Trigger: CTGCCAGCAGTGTGTAGGAATTCCCAAGGCCCACATCCTTGCCAACAGGTGTTCATTTCTTAGCTCTGGAAATAGCTTCTTAAATCGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486131.1
CDS CCA 72 bp TGTCACACTCTTTCCCTTCGCTTCCGTATTTATAGATaGCATCGAACTTCCTCACCACTGCCTCCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: CHTLSLRFRIYR*HRTSSPLPPES
Trigger: ACTTTCTGGAGGCAGTGGTGAGGAAGTTCGATGCCATCTATAAATACGGAAGCGAAGGGAAAGAGTGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000460332.1
CDS CCA 72 bp TCTAGGATCTTTGAACTGACCTGGAAGCACGATGAATaGACAAGTCATACGCATGTCTCCATGCAAACTGCC +
Preference number: 6 (lower is better)
Translates to: SRIFELTWKHDE*TSHTHVSMQTA
Trigger: GGCAGTTTGCATGGAGACATGCGTATGACTTGTCCATTCATCGTGCTTCCAGGTCAGTTCAAAGATCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CAA 72 bp TACAGTTCCTCCAGCTGCCCACTGATGGAAGCCATGTaGGGTTCACTCAACCTGTTAAGTAGACCTTTTACA +
Preference number: 6 (lower is better)
Translates to: YSSSSCPLMEAM*GSLNLLSRPFT
Trigger: TGTAAAAGGTCTACTTAACAGGTTGAGTGAACCCAACATGGCTTCCATCAGTGGGCAGCTGGAGGAACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275820.4
CDS CCA 72 bp ATGAGGAGAGACTGTACCACGTGGAAGTTGTATAAATaGGCAATGACGGTGAACAGGTTGTCACACTCTTTC +
Preference number: 6 (lower is better)
Translates to: MRRDCTTWKLYK*AMTVNRLSHSF
Trigger: GAAAGAGTGTGACAACCTGTTCACCGTCATTGCCCATTTATACAACTTCCACGTGGTACAGTCTCTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000460332.1
CDS CCA 72 bp GACAGGGAAGGACATGAGGGGATAACGAGGGAAGTCTaGATGAAAAATGGGCTTGAATTTCCACAATGTGAA +
Preference number: 6 (lower is better)
Translates to: DREGHEGITREV*MKNGLEFPQCE
Trigger: TTCACATTGTGGAAATTCAAGCCCATTTTTCATCCAGACTTCCCTCGTTATCCCCTCATGTCCTTCCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469271.1
CDS CAA 72 bp AAGAAGCTATTTCCAGAGCTAAGAAATGAACACCTGTaGGCAAGGATGTGGGCCTTGGGAATTCCTACACAC +
Preference number: 6 (lower is better)
Translates to: KKLFPELRNEHL*ARMWALGIPTH
Trigger: GTGTGTAGGAATTCCCAAGGCCCACATCCTTGCCAACAGGTGTTCATTTCTTAGCTCTGGAAATAGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486131.1
CDS TCA 72 bp TCTGTAAGGCCTCCAGATAAACCTTGTACATTTCAGTaGCCATTCAAGAACAGTAAGAGAGCTGCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: SVRPPDKPCTFQ*PFKNSKRAAPG
Trigger: ACCTGGAGCAGCTCTCTTACTGTTCTTGAATGGTCACTGAAATGTACAAGGTTTATCTGGAGGCCTTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469271.1
ENST00000475176.1
ENST00000489850.5
CDS CCA 72 bp GGCCACCAGATGAACCAAATTAGAGAAATTCGTAGCTaGCAAGTTTTCCAAGTCCCGAAATTTGTCCCATAT +
Preference number: 6 (lower is better)
Translates to: GHQMNQIREIRS*QVFQVPKFVPY
Trigger: ATATGGGACAAATTTCGGGACTTGGAAAACTTGCCAGCTACGAATTTCTCTAATTTGGTTCATCTGGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000485661.1
CDS CAA 90 bp GAATTTGCTAGCCAGGAAAGCATAGAAGGGATTGTAAGTTTTCTCTaGAAGGCAGCAATCCATGAGAACGTGAATGATTTCTCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: EFASQESIEGIVSFL*KAAIHENVNDFSLL
Trigger: CAGGAGAGAGAAATCATTCACGTTCTCATGGATTGCTGCCTTCAAGAGAAAACTTACAATCCCTTCTATGCTTTCCTGGCTAGCAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000485661.1
CDS TCA 72 bp GAAAGCGATTTTGTCTTCAACAAGTGGGCCACCAGATaGACCAAATTAGAGAAATTCGTAGCTGGCAAGTTT +
Preference number: 6 (lower is better)
Translates to: ESDFVFNKWATR*TKLEKFVAGKF
Trigger: AAACTTGCCAGCTACGAATTTCTCTAATTTGGTTCATCTGGTGGCCCACTTGTTGAAGACAAAATCGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000485661.1
CDS CAA 72 bp ATTCAACTACCTTTAAGATGGAAAGGGAAAGCGATTTaGTCTTCAACAAGTGGGCCACCAGATGAACCAAAT +
Preference number: 6 (lower is better)
Translates to: IQLPLRWKGKAI*SSTSGPPDEPN
Trigger: ATTTGGTTCATCTGGTGGCCCACTTGTTGAAGACAAAATCGCTTTCCCTTTCCATCTTAAAGGTAGTTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000485661.1
CDS TCA 72 bp GCAAGTTTTCCAAGTCCCGAAATTTGTCCCATATGCTaGACTGGAAAGTCATCTGAAATCTCCTTTCATATT +
Preference number: 6 (lower is better)
Translates to: ASFPSPEICPIC*TGKSSEISFHI
Trigger: AATATGAAAGGAGATTTCAGATGACTTTCCAGTTCAGCATATGGGACAAATTTCGGGACTTGGAAAACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275820.4
ENST00000485661.1