RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000073536

Ensembl transcript IDs: ENST00000360831.9, ENST00000442241.9, ENST00000586869.5, ENST00000588019.1, ENST00000588642.1, ENST00000589367.5, ENST00000593176.1

Found 919 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAAGCCCGTCCCCTCCCCACCGGAGACAGGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: RSPSPPHRRQVTDWV*PVRMRSQRPAVVSQ
Trigger: CTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGGGAGGGGACGGGCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR GCA 90 bp TGGGCCCAGGGCAGTGCTTGGTGCCTGGCAGGGCCTCAAGCAGTGTaGTATGCGAAGGCAGAGGCATCCCCTGGAGCAGGGCTGACCAGC +
Preference number: 1 (lower is better)
Translates to: WAQGSAWCLAGPQAV*YAKAEASPGAGLTS
Trigger: GCTGGTCAGCCCTGCTCCAGGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp CCAGGGCAGTGCTTGGTGCCTGGCAGGGCCTCAAGCAGTGTGCTATaGGAAGGCAGAGGCATCCCCTGGAGCAGGGCTGACCAGCAGAAC +
Preference number: 1 (lower is better)
Translates to: PGQCLVPGRASSSVL*EGRGIPWSRADQQN
Trigger: GTTCTGCTGGTCAGCCCTGCTCCAGGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGGCTCCC +
Preference number: 1 (lower is better)
Translates to: GLQLCPRSAHCHPWS*WPHSGTQGSHGGAP
Trigger: GGGAGCCCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR GCA 90 bp GGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTGCT +
Preference number: 1 (lower is better)
Translates to: GDRLGVPGEDALTAA*SCVPDPHTAILGAA
Trigger: AGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR TCA 90 bp CCTCAGCAGGTTCAAAGGCCCCAGTGCGCAGGGCATAGTCAGTGCTaGGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCC +
Preference number: 1 (lower is better)
Translates to: PQQVQRPQCAGHSQC*GPWCSPSGRGLAES
Trigger: GGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTCAGCACTGACTATGCCCTGCGCACTGGGGCCTTTGAACCTGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR GCA 90 bp CATCACCTTCCCCGCTCTATCCCATGGGCCCAGGGCAGTGCTTGGTaGCTGGCAGGGCCTCAAGCAGTGTGCTATGCGAAGGCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: HHLPRSIPWAQGSAW*LAGPQAVCYAKAEA
Trigger: TGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGCCCATGGGATAGAGCGGGGAAGGTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GAAGAGCCATCACCTTCCCCGCTCTATCCCATGGGCCCAGGGCAGTaGTTGGTGCCTGGCAGGGCCTCAAGCAGTGTGCTATGCGAAGGC +
Preference number: 1 (lower is better)
Translates to: EEPSPSPLYPMGPGQ*LVPGRASSSVLCEG
Trigger: GCCTTCGCATAGCACACTGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGCCCATGGGATAGAGCGGGGAAGGTGATGGCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp TTCACCTGGAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCACTaGCCACAGCTGCTAGACTCCCTCCTCCTCCAAATCTGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: FTWRHLRPGHARLSH*PQLLDSLLLQIWAG
Trigger: CCCAGCCCAGATTTGGAGGAGGAGGGAGTCTAGCAGCTGTGGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGATGCCTCCAGGTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GGTTCCACACTCAGTGCTGCAGTACCTTGCACCTTCCATCTGACCTaGCTGGGCCCCAGCAGGAGCAGGGGATGGGCATGGGACGTCCTG +
Preference number: 1 (lower is better)
Translates to: GSTLSAAVPCTFHLT*LGPSRSRGWAWDVL
Trigger: CAGGACGTCCCATGCCCATCCCCTGCTCCTGCTGGGGCCCAGGCAGGTCAGATGGAAGGTGCAAGGTACTGCAGCACTGAGTGTGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCG +
Preference number: 1 (lower is better)
Translates to: GCAHSGLQLCPRSAH*HPWSCWPHSGTQGS
Trigger: CGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR CCA 90 bp ACTGGTGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCA +
Preference number: 1 (lower is better)
Translates to: TGGEGVCTAISAFVL*QGRQLAEAESRWGS
Trigger: TGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR CCA 90 bp AGCCATCACCTTCCCCGCTCTATCCCATGGGCCCAGGGCAGTGCTTaGTGCCTGGCAGGGCCTCAAGCAGTGTGCTATGCGAAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: SHHLPRSIPWAQGSA*CLAGPQAVCYAKAE
Trigger: CTCTGCCTTCGCATAGCACACTGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGCCCATGGGATAGAGCGGGGAAGGTGATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp GAGGGAATCCTCTGGAAGAGCCATCACCTTCCCCGCTCTATCCCATaGGCCCAGGGCAGTGCTTGGTGCCTGGCAGGGCCTCAAGCAGTG +
Preference number: 1 (lower is better)
Translates to: EGILWKSHHLPRSIP*AQGSAWCLAGPQAV
Trigger: CACTGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGCCCATGGGATAGAGCGGGGAAGGTGATGGCTCTTCCAGAGGATTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp CACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGG +
Preference number: 1 (lower is better)
Translates to: HSGLQLCPRSAHCHP*SCWPHSGTQGSHGG
Trigger: CCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR TCA 90 bp CACCTACTTTCAGCTTCAACCCCAGGCCCTCAGAAACCAGAGCCATaGGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGC +
Preference number: 1 (lower is better)
Translates to: HLLSASTPGPQKPEP*DLPYHQHPAGPGSG
Trigger: GCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTTGAAGCTGAAAGTAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTaGACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: AGHTHSQVPTGGEGV*TAISAFVLWQGRQL
Trigger: CAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR GCA 90 bp TCCACTTGCTGTGGCCAGCGAGGGTCCTGCCCACCTGCTTCCCTGTaGTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: STCCGQRGSCPPASL*LGPRGESGHSCSLR
Trigger: CCTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCCACAGCAAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR CCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTaGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCC +
Preference number: 1 (lower is better)
Translates to: CALPSQPLFSGREGS*QRPSRGGGQRELRA
Trigger: GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR GCA 90 bp CCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGA +
Preference number: 1 (lower is better)
Translates to: PHAFSGPHWWGGCVH*HLSLCSLAGKAAGR
Trigger: TCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR GCA 90 bp AGGCCTGTGATCCACTTGCTGTGGCCAGCGAGGGTCCTGCCCACCTaGTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTG +
Preference number: 1 (lower is better)
Translates to: RPVIHLLWPARVLPT*FPVLGSQRRIWPFL
Trigger: CAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCACAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR CCA 90 bp CTGCTCAGAGCTCATACTGCTGCCTCCCCATCTGAGGGAATCCTCTaGAAGAGCCATCACCTTCCCCGCTCTATCCCATGGGCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: LLRAHTAASPSEGIL*KSHHLPRSIPWAQG
Trigger: GCCCTGGGCCCATGGGATAGAGCGGGGAAGGTGATGGCTCTTCCAGAGGATTCCCTCAGATGGGGAGGCAGCAGTATGAGCTCTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp AGATCGTGTCCATCGGGCCGGAGGAGATGCGGAGGCTGGAGGATCTaGAATACCTATTTCCCTGTTAAGGGGGAGGGCCCCAGGACACCC +
Preference number: 1 (lower is better)
Translates to: RSCPSGRRRCGGWRI*NTYFPVKGEGPRTP
Trigger: GGGTGTCCTGGGGCCCTCCCCCTTAACAGGGAAATAGGTATTCCAGATCCTCCAGCCTCCGCATCTCCTCCGGCCCGATGGACACGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp CCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGCGGAGGCTaGAGGATCTGGAATACCTATTTCCCTGTTAAGGGGGAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: PGKRSCPSGRRRCGG*RIWNTYFPVKGEGP
Trigger: GGGGCCCTCCCCCTTAACAGGGAAATAGGTATTCCAGATCCTCCAGCCTCCGCATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp CGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTaGTGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTG +
Preference number: 1 (lower is better)
Translates to: RSIEDSRPHAFSGPH*WGGCVHCHLSLCSL
Trigger: CAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR CCA 90 bp TCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCA +
Preference number: 1 (lower is better)
Translates to: SIEDSRPHAFSGPHW*GGCVHCHLSLCSLA
Trigger: TGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR CCA 90 bp AGCCTCGGGGCTCTCTCTTCCCCTAGATTTCCTGGACCTACGCCTTaGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGG +
Preference number: 1 (lower is better)
Translates to: SLGALSSPRFPGPTP*ASSRSVSTSSCYRR
Trigger: CCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGGCGTAGGTCCAGGAAATCTAGGGGAAGAGAGAGCCCCGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATaGGGAGGCTGGAGGATCTGGAATACCTATTTCCCTGTTAAGGGG +
Preference number: 1 (lower is better)
Translates to: ARNPGKRSCPSGRRR*GGWRIWNTYFPVKG
Trigger: CCCCTTAACAGGGAAATAGGTATTCCAGATCCTCCAGCCTCCGCATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GGCACTACTGTCAAGCTGATGGAGCTAAAGCCTAACACGTGTTACTaGCTCAGTGTCCGTGCAGCCAACACAGCTGGGGTGGGGAAGTGG +
Preference number: 1 (lower is better)
Translates to: GTTVKLMELKPNTCY*LSVRAANTAGVGKW
Trigger: CCACTTCCCCACCCCAGCTGTGTTGGCTGCACGGACACTGAGGCAGTAACACGTGTTAGGCTTTAGCTCCATCAGCTTGACAGTAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp GGCAGGGCCTCAAGCAGTGTGCTATGCGAAGGCAGAGGCATCCCCTaGAGCAGGGCTGACCAGCAGAACTCTCTTGATGATGAAAACCTT +
Preference number: 1 (lower is better)
Translates to: GRASSSVLCEGRGIP*SRADQQNSLDDENL
Trigger: AAGGTTTTCATCATCAAGAGAGTTCTGCTGGTCAGCCCTGCTCCAGGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 90 bp CAGGGAACCAGGGCTTTGGAGGTTGGGAACACCCCTATGCCCACATaGCTCATCTGGCTAGCTTTCCTTCTGCCTGGGTCAAGAAGCATC +
Preference number: 1 (lower is better)
Translates to: QGTRALEVGNTPMPT*LIWLAFLLPGSRSI
Trigger: GATGCTTCTTGACCCAGGCAGAAGGAAAGCTAGCCAGATGAGTCATGTGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCTGGTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTaGAAGGGCGGGGGCTGGACAATCTCATTTAGCACAGTCCTTGAT +
Preference number: 1 (lower is better)
Translates to: EGRQVPGQCGFGVVQ*KGGGWTISFSTVLD
Trigger: ATCAAGGACTGTGCTAAATGAGATTGTCCAGCCCCCGCCCTTGCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp TGGAGGCCTTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATaGCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAA +
Preference number: 1 (lower is better)
Translates to: WRPYPVRWRNCTSIS*QQSHVAGAYCSGQQ
Trigger: TTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp TGTGCTGTCCAATACTGGAGGCCTTACCCAGTGCGATGGAGGAACTaGACTTCTATTTCATGCCAGCAGTCACATGTGGCCGGTGCCTAC +
Preference number: 1 (lower is better)
Translates to: CAVQYWRPYPVRWRN*TSISCQQSHVAGAY
Trigger: GTAGGCACCGGCCACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTaGTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCAC +
Preference number: 1 (lower is better)
Translates to: RSLIKELQVIQHPKV*FMLQTASDGLAGTH
Trigger: GTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp CCGGTGCCTACTGCAGTGGACAACAATACAGCCCTAGATTCTCCTTaGCCACTATCACAACTGGCCTCTCTCTTACCAACACGGGGGAAG +
Preference number: 1 (lower is better)
Translates to: PVPTAVDNNTALDSP*PLSQLASLLPTRGK
Trigger: CTTCCCCCGTGTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 90 bp TCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTaGCAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCA +
Preference number: 1 (lower is better)
Translates to: SVPARYRVADTGQVQ*QLPVTFDFWLWGVP
Trigger: TGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp ACCTTTCTGTGTGCTGTCCAATACTGGAGGCCTTACCCAGTGCGATaGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTGGCC +
Preference number: 1 (lower is better)
Translates to: TFLCAVQYWRPYPVR*RNCTSISCQQSHVA
Trigger: GGCCACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACACAGAAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp ACCTTCCAGGCCTGGTGCAGTCTGAGAGCACAGCAGACAAACAGCTaGCACCAAGGAGCTCAGTGGCTGATAGTTTTGTTCGCTTCTTAT +
Preference number: 1 (lower is better)
Translates to: TFQAWCSLRAQQTNS*HQGAQWLIVLFASY
Trigger: ATAAGAAGCGAACAAAACTATCAGCCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTGTGCTCTCAGACTGCACCAGGCCTGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp TGCACTTCTATTTCATGCCAGCAGTCACATGTGGCCGGTGCCTACTaGAGTGGACAACAATACAGCCCTAGATTCTCCTTGGCCACTATC +
Preference number: 1 (lower is better)
Translates to: CTSISCQQSHVAGAY*SGQQYSPRFSLATI
Trigger: GATAGTGGCCAAGGAGAATCTAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGCATGAAATAGAAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp TCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTaGAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCTGCAGACAG +
Preference number: 1 (lower is better)
Translates to: SSSKSGLGLGPSLKN*RSSSTLKSALCCRQ
Trigger: CTGTCTGCAGCATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp TGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTaGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTAGATTCT +
Preference number: 1 (lower is better)
Translates to: CDGGTALLFHASSHM*PVPTAVDNNTALDS
Trigger: AGAATCTAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp CACCCCTATGCCCACATGACTCATCTGGCTAGCTTTCCTTCTGCCTaGGTCAAGAAGCATCAATTCCAGAATGCATGCTTCTGGGAGGTT +
Preference number: 1 (lower is better)
Translates to: HPYAHMTHLASFPSA*VKKHQFQNACFWEV
Trigger: AACCTCCCAGAAGCATGCATTCTGGAATTGATGCTTCTTGACCCAGGCAGAAGGAAAGCTAGCCAGATGAGTCATGTGGGCATAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp GTTCTCGTGGCAAAGAACTTCCTCTGTATCAACAATACCCACTTCTaGTCAGAGCTCATACTGCTGCCTCCCCATCTGAGGGAATCCTCT +
Preference number: 1 (lower is better)
Translates to: VLVAKNFLCINNTHF*SELILLPPHLRESS
Trigger: AGAGGATTCCCTCAGATGGGGAGGCAGCAGTATGAGCTCTGAGCAGAAGTGGGTATTGTTGATACAGAGGAAGTTCTTTGCCACGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp ACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTaGCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGG +
Preference number: 1 (lower is better)
Translates to: TSSCYRRWPRHRRMS*PRQRIVHGSSTRFW
Trigger: CCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 90 bp TGCAAGGGCGGGGGCTGGACAATCTCATTTAGCACAGTCCTTGATTaGGTCATGGGGATTCTAGGACAAGGAATTAGAACCCAACACACA +
Preference number: 1 (lower is better)
Translates to: CKGGGWTISFSTVLD*VMGILGQGIRTQHT
Trigger: TGTGTGTTGGGTTCTAATTCCTTGTCCTAGAATCCCCATGACTCAATCAAGGACTGTGCTAAATGAGATTGTCCAGCCCCCGCCCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 90 bp AGCCCTGAGCTTGTTTTCCTGCAACGAGAGGGTCCCATTTGGGGGTaGTGGGAGACAATGACAGATCATCAGGCATTAGATTCTCATAAG +
Preference number: 1 (lower is better)
Translates to: SPELVFLQREGPIWG*WETMTDHQALDSHK
Trigger: CTTATGAGAATCTAATGCCTGATGATCTGTCATTGTCTCCCATCACCCCCAAATGGGACCCTCTCGTTGCAGGAAAACAAGCTCAGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp AGTCTGAGAGCACAGCAGACAAACAGCTGGCACCAAGGAGCTCAGTaGCTGATAGTTTTGTTCGCTTCTTATGTAGCCTCACTGCAGATA +
Preference number: 1 (lower is better)
Translates to: SLRAQQTNSWHQGAQ*LIVLFASYVASLQI
Trigger: TATCTGCAGTGAGGCTACATAAGAAGCGAACAAAACTATCAGCCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTGTGCTCTCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp GCTCTTACACCAGAAAAATACAGAAATAGCTGTCATGGACAGACGTaGTGGCCCATGAACTGTCAAACTAGCTTGAGCTCTGGACGGAGG +
Preference number: 1 (lower is better)
Translates to: ALTPEKYRNSCHGQT*WPMNCQTSLSSGRR
Trigger: CCTCCGTCCAGAGCTCAAGCTAGTTTGACAGTTCATGGGCCACCACGTCTGTCCATGACAGCTATTTCTGTATTTTTCTGGTGTAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp GCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATaGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAG +
Preference number: 1 (lower is better)
Translates to: AKTQENELPEAKNRP*IFNKILGTTVKLME
Trigger: CTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 90 bp ACAGCCCTTTGGTTGGAAATATCCCATAATGAGGAGGTACAGGCTTaGGTCATGCATCTTTGCACCTGTTTCCTGCGTCAATGGCTAGGT +
Preference number: 1 (lower is better)
Translates to: TALWLEISHNEEVQA*VMHLCTCFLRQWLG
Trigger: ACCTAGCCATTGACGCAGGAAACAGGTGCAAAGATGCATGACTCAAGCCTGTACCTCCTCATTATGGGATATTTCCAACCAAAGGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp CTTACACCAGAAAAATACAGAAATAGCTGTCATGGACAGACGTGGTaGCCCATGAACTGTCAAACTAGCTTGAGCTCTGGACGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: LTPEKYRNSCHGQTW*PMNCQTSLSSGRRD
Trigger: ATCCCTCCGTCCAGAGCTCAAGCTAGTTTGACAGTTCATGGGCCACCACGTCTGTCCATGACAGCTATTTCTGTATTTTTCTGGTGTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp AAGATCTCGGCCTGGGGTCTGAGTCCTGATGGGAATTCCTTTCACTaGTTGAAAGTTCTCGTGGCAAAGAACTTCCTCTGTATCAACAAT +
Preference number: 1 (lower is better)
Translates to: KISAWGLSPDGNSFH*LKVLVAKNFLCINN
Trigger: ATTGTTGATACAGAGGAAGTTCTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAATTCCCATCAGGACTCAGACCCCAGGCCGAGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 90 bp GCTAGTTCTGAGCAGTTTATACAAGGATGGTTTGGAAATCCAATCTaGGTAGTTCAGACCATGACCCTGCTTAGCATGGGATGCAGGAGA +
Preference number: 1 (lower is better)
Translates to: ASSEQFIQGWFGNPI*VVQTMTLLSMGCRR
Trigger: TCTCCTGCATCCCATGCTAAGCAGGGTCATGGTCTGAACTACTCAGATTGGATTTCCAAACCATCCTTGTATAAACTGCTCAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 90 bp CATCACTATAATGTTCCCCTTCCAAAGCCATTGGTTTTTAGACTCTaGAATTCAGTGCCCATGATTGTGAGTAGGCTGGGAAGTCAAGGG +
Preference number: 1 (lower is better)
Translates to: HHYNVPLPKPLVFRL*NSVPMIVSRLGSQG
Trigger: CCCTTGACTTCCCAGCCTACTCACAATCATGGGCACTGAATTGCAGAGTCTAAAAACCAATGGCTTTGGAAGGGGAACATTATAGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp GAACCCAACACACAAAACTTAAGTTACTTATTTGGTCATAGAACCTaGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATA +
Preference number: 1 (lower is better)
Translates to: EPNTQNLSYLFGHRT*DLTLYRADTRGPLI
Trigger: TATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTAACTTAAGTTTTGTGTGTTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp AGAACTCTCTTGATGATGAAAACCTTTCTGTGTGCTGTCCAATACTaGAGGCCTTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCA +
Preference number: 1 (lower is better)
Translates to: RTLLMMKTFLCAVQY*RPYPVRWRNCTSIS
Trigger: TGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACACAGAAAGGTTTTCATCATCAAGAGAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp ATTCCAGAATGCATGCTTCTGGGAGGTTTAAGGATTAAGCCACTCTaGGGCCCACTAGGAATGCAAACGAATGTATTTTTCAACATCACT +
Preference number: 1 (lower is better)
Translates to: IPECMLLGGLRIKPL*GPLGMQTNVFFNIT
Trigger: AGTGATGTTGAAAAATACATTCGTTTGCATTCCTAGTGGGCCCCAGAGTGGCTTAATCCTTAAACCTCCCAGAAGCATGCATTCTGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 90 bp AGGGCCTGGTTTAATCCCAGCTTTCTCTTACTAGATGTGAGGGCATaGGCTAATCATTTCTTATGTTGTTTCCTCATCAAAAGTTTTGGA +
Preference number: 1 (lower is better)
Translates to: RAWFNPSFLLLDVRA*ANHFLCCFLIKSFG
Trigger: TCCAAAACTTTTGATGAGGAAACAACATAAGAAATGATTAGCCCATGCCCTCACATCTAGTAAGAGAAAGCTGGGATTAAACCAGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR TCA 90 bp CAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTCCCAGCTCAGGCCTGTaGTCCACTTGCTGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: QVTDWVCPVRMRSQRPAVPSSGL*STCCGQ
Trigger: CTGGCCACAGCAAGTGGATCACAGGCCTGAGCTGGG...AACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CCA 90 bp GAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACGTGATCCACTTGCTGTaGCCAGCGAGGGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: EGHGVHPVAVALQSPAQHVIHLL*PARVLP
Trigger: GGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCAC...GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR CAA 90 bp TCAGGGTTCGCATGGAGGGGCTCCCAGCTCAGGCCTGTGATCCACTaGCTGTGGCCAGCGAGGGTCCTGCCCACCTGCTTCCCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: SGFAWRGSQLRPVIH*LWPARVLPTCFPVL
Trigger: AAGCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCACAGGCCTGAGCTGGGAGCCCCTCCATGCGAACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR TCA 90 bp GACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGGTGGTGTCTCTGTGCTaGGATCCCAGAAGCGCACGG +
Preference number: 2 (lower is better)
Translates to: DWVCPVRMRSQRPAVVSQVVSLC*DPRSAR
Trigger: CCGTGCGCTTCTGGGATCTCAGCACAGAGACACCAC...CTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR GCA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGTCTGGCTCTGGGGTGTaGCACAGGCGGGGATCTGTG +
Preference number: 2 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMSGSGV*HRRGSV
Trigger: CACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGA...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp GCCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGGAGGGTCCTGCCCACCTaGTTCCCTGTGCTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: AILGAAGHIAALRVRMEGRVLPT*FPVLGS
Trigger: GGACCCAAGCACAGGGAAGCAGGTGGGCAGGACCCT...CCCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR GCA 90 bp GAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: EGHGVHPVAVALQSPAQHPRSAH*HPWSCW
Trigger: CCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGG...GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR CCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGTCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGC +
Preference number: 2 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPESGPHW*GGCVHC
Trigger: GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGA...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 90 bp AGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTaGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGTCGAGGT +
Preference number: 2 (lower is better)
Translates to: RSPLVGRVCALPSQP*FSGREGSWQRPSRG
Trigger: ACCTCGACTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR-3UTR TCA 90 bp CACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTGCCATTCTTGCAGCCTaGGGCCAGCTTCCTGCCATC +
Preference number: 2 (lower is better)
Translates to: HPVAVALQSPAQHTVMSSAILAA*GQLPAI
Trigger: GATGGCAGGAAGCTGGCCTCAGGCTGCAAGAATGGC...AGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR CCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCATGCGGGCCCGGGGTCTaGCAGAGTGGTATGGGCACC +
Preference number: 2 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPCGPGV*QSGMGT
Trigger: GGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCA...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp TCAGTGCTGAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGTGTCTCCAGAGCCACTaGCCAGGTACCCCCTCCATG +
Preference number: 2 (lower is better)
Translates to: SVLRAMVFTQWPWPCRVRCLQSH*PGTPSM
Trigger: CATGGAGGGGGTACCTGGCCAGTGGCTCTGGAGACA...CCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTCAGCACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR CCA 90 bp GTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCAGACAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATG +
Preference number: 2 (lower is better)
Translates to: VAVALQSPAQHTVMSSPDRQVTD*VCPVRM
Trigger: CATCCTCACCGGGCACACCCAGTCGGTCACCTGTCT...GTCTGGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR TCA 90 bp AGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCGCCATTCTTGCAGCCTaGGGCCAGCTTCCTGCCATC +
Preference number: 2 (lower is better)
Translates to: RMRSQRPAVVSQIRTLPSAILAA*GQLPAI
Trigger: GATGGCAGGAAGCTGGCCTCAGGCTGCAAGAATGGC...GGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCG +
Preference number: 2 (lower is better)
Translates to: ALRNQSHETYHTTSTLRAEAESR*GSERTS
Trigger: CGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTC...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAGCCCAGGGCAGTGCTTaGTGCCTGGCAGGGCCTCAA +
Preference number: 2 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPAQGSA*CLAGPQ
Trigger: TTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGC...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCG +
Preference number: 2 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHEAESR*GSERTS
Trigger: CGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTC...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR-3UTR CCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGTCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVSAFVL*QGRQLA
Trigger: TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGA...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR-3UTR CCA 90 bp GTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGAGGAGAATCTaGCCATTCTTGCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: VTDWVCPVRMRSQRPAVVSQRRI*PFLQPE
Trigger: CTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGA...CACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR TCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCAGGCCTGGTGCAGTCTaGGAGCACAGCAGACAAACA +
Preference number: 2 (lower is better)
Translates to: ALRNQSHETYHTTSTLRARPGAV*EHSRQT
Trigger: TGTTTGTCTGCTGTGCTCTCAGACTGCACCAGGCCT...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 90 bp ATAGTCAGTGCTGAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTaGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCAGACTTT +
Preference number: 2 (lower is better)
Translates to: IVSAEGHGVHPVAVA*QSPAQHTVMSSPDF
Trigger: AAAGTCTGGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTCAGCACTGACTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR TCA 90 bp CTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATTGTGTCCCTTGCATGTaGAATGTGGTGTCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: LGVPGEDALTAACSCVPDCVPCM*NVVSLC
Trigger: GCACAGAGACACCACATTTCACATGCAAGGGACACA...ATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR GCA 90 bp ATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGAATCTGGCCATTCTTaGAGCCTGAGGCCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: MRSQRPAVVSQIRTLPSLESGHS*SLRPAS
Trigger: GGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTC...CAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHSAFVL*QGRQLA
Trigger: TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGA...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR-3UTR CCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCACTCCTCCTCCAAATCTaGGCTGGGTCTAGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPLLLQI*AGSRSL
Trigger: GAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAG...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTGGCVH*HLSLCS
Trigger: AGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR-3UTR GCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAGTCACATGTGGCCGGTaGCTACTGCAGTGGACAACA +
Preference number: 2 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPVTCGR*LLQWTT
Trigger: TGTTGTCCACTGCAGTAGGCACCGGCCACATGTGAC...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCG +
Preference number: 2 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSEAESR*GSERTS
Trigger: CGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTC...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR-3UTR GCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAATTTGGCGTAGTCCAGTaGAAGGGCGGGGGCTGGACA +
Preference number: 2 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQFGVVQ*KGGGWT
Trigger: TGTCCAGCCCCCGCCCTTGCACTGGACTACGCCAAA...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAAGTGCCTGGTCAGTGTaGTTTTGGCGTAGTCCAGTG +
Preference number: 2 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPSAWSV*FWRSPV
Trigger: CACTGGACTACGCCAAAACCACACTGACCAGGCACT...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCCTTTGGGGCAGGGCCTaGTTTAATCCCAGCTTTCTC +
Preference number: 2 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFLWGRA*FNPSFL
Trigger: GAGAAAGCTGGGATTAAACCAGGCCCTGCCCCAAAG...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp GTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCAGACCTTGCATGTGAAATGTaGTGTCTCTGTGCTGAGATC +
Preference number: 2 (lower is better)
Translates to: VAVALQSPAQHTVMSSPDLACEM*CLCAEI
Trigger: GATCTCAGCACAGAGACACCACATTTCACATGCAAG...GTCTGGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR-3UTR TCA 90 bp GGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTGCACGGGCCAAGTTCAGTaGCAACTTCCTGTGACCTTC +
Preference number: 2 (lower is better)
Translates to: GREGRQVPGQCGFGVVQCTGQVQ*QLPVTF
Trigger: GAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGT...GCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCTTTGGTCATAGAACCTaGGATCTGACCCTGTACAGA +
Preference number: 2 (lower is better)
Translates to: ALRNQSHETYHTTSTLRAFGHRT*DLTLYR
Trigger: TCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAA...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGCAGCAGACAAACAGCTaGCACCAAGGAGCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLQQTNS*HQGAQW
Trigger: CCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTG...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCACATGGACAGACGTGGTaGCCCATGAACTGTCAAACT +
Preference number: 2 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPHGQTW*PMNCQT
Trigger: AGTTTGACAGTTCATGGGCCACCACGTCTGTCCATG...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp GATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTCAGCTTCCTGCCATCTaGAGACCAGGATATACTAAG +
Preference number: 2 (lower is better)
Translates to: DALTAACSCVPDPHTAILQLPAI*RPGYTK
Trigger: CTTAGTATATCCTGGTCTCCAGATGGCAGGAAGCTG...AAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR CAA 90 bp GCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTAGATTCTCCTaGGCCACTATCACAACTGGCCTCTCTCTTACCAACACGGGGGAA +
Preference number: 2 (lower is better)
Translates to: AGAYCSGQQYSPRFS*ATITTGLSLTNTGE
Trigger: TTCCCCCGTGTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCAGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: QEVAKTQENELPEAKNRPGGCVH*HLSLCS
Trigger: AGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTTTTGGCGTAGTCCAGTaGAAGGGCGGGGGCTGGACA +
Preference number: 2 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVFGVVQ*KGGGWT
Trigger: TGTCCAGCCCCCGCCCTTGCACTGGACTACGCCAAA...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCATGCACTTCTATTTCATaGCAGCAGTCACATGTGGCC +
Preference number: 2 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPCTSIS*QQSHVA
Trigger: GGCCACATGTGACTGCTGGCATGAAATAGAAGTGCA...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGCTAGATGTGAGGGCATaGGCTAATCATTTCTTATGT +
Preference number: 2 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPELDVRA*ANHFLC
Trigger: ACATAAGAAATGATTAGCCCATGCCCTCACATCTAG...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCCTGGACGGAGGGATGTaGTACAAAGTGCACAATAAG +
Preference number: 2 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFLDGGM*YKVHNK
Trigger: CTTATTGTGCACTTTGTACCACATCCCTCCGTCCAG...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 90 bp AAGGCAGAGGCATCCCCTGGAGCAGGGCTGACCAGCAGAACTCTCTaGATGATGAAAACCTTTCTGTGTGCTGTCCAATACTGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: KAEASPGAGLTSRTL*MMKTFLCAVQYWRP
Trigger: AGGCCTCCAGTATTGGACAGCACACAGAAAGGTTTTCATCATCAAGAGAGTTCTGCTGGTCAGCCCTGCTCCAGGGGATGCCTCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR TCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAACGGGCCAAGTTCAGTaGCAACTTCCTGTGACCTTC +
Preference number: 2 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQTGQVQ*QLPVTF
Trigger: GAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGT...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR TCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTTCTCGGCCTGGGGTCTaGGTCCTGATGGGAATTCCT +
Preference number: 2 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVSRPGV*VLMGIP
Trigger: AGGAATTCCCATCAGGACTCAGACCCCAGGCCGAGA...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCGGATGTGGTACAAAGTaGACAATAAGCTTTGGGGCA +
Preference number: 2 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFGCGTK*TISFGA
Trigger: TGCCCCAAAGCTTATTGTGCACTTTGTACCACATCC...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGTCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGC +
Preference number: 2 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRSGPHW*GGCVHC
Trigger: GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGA...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTCGATTTCTGGCTCTaGGGTGTGCCACAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRFDFWL*GVPQAG
Trigger: CCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAA...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGGCCACTATCACAACTaGCCTCTCTCTTACCAACAC +
Preference number: 2 (lower is better)
Translates to: YQLLLQEVAKTQENELPEGHYHN*PLSYQH
Trigger: GTGTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGGGCCACTATCACAACTaGCCTCTCTCTTACCAACAC +
Preference number: 2 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLGHYHN*PLSYQH
Trigger: GTGTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCC...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGTTCAGTTTGCAACCCTaGCCACTGACTTCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: YQLLLQEVAKTQENELPEFSLQP*PLTSAA
Trigger: AGCTGCTGAAGTCAGTGGCCAGGGTTGCAAACTGAA...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR TCA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCAAGCACAGTCCTTGATTaGGTCATGGGGATTCTAGGA +
Preference number: 2 (lower is better)
Translates to: QEVAKTQENELPEAKNRPSTVLD*VMGILG
Trigger: TCCTAGAATCCCCATGACTCAATCAAGGACTGTGCT...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGTTCTCAGGTCCCCACTaGTGGGGAGGGTGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMFSGPH*WGGCVH
Trigger: GTGCACACACCCTCCCCACCAGTGGGGACCTGAGAA...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGAACAATACCCACTTCTaGTCAGAGCTCATACTGCTG +
Preference number: 2 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLNNTHF*SELILL
Trigger: CAGCAGTATGAGCTCTGAGCAGAAGTGGGTATTGTT...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGAACAGGGAGACTGGTaGTCTAAGACTAAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQEQGDW*SKTKRL
Trigger: GAGCCTTTTAGTCTTAGAGCACCAGTCTCCCTGTTC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGACCTAACACGTGTTACTaGCTCAGTGTCCGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRPNTCY*LSVRAA
Trigger: GGCTGCACGGACACTGAGGCAGTAACACGTGTTAGG...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGAGGGAAGGCAAGTGCCTaGTCAGTGTGGTTTTGGCGT +
Preference number: 2 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRGKASA*SVWFWR
Trigger: ACGCCAAAACCACACTGACCAGGCACTTGCCTTCCC...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 90 bp CAGCAGACAAACAGCTGGCACCAAGGAGCTCAGTGGCTGATAGTTTaGTTCGCTTCTTATGTAGCCTCACTGCAGATATGTGCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: QQTNSWHQGAQWLIV*FASYVASLQICARW
Trigger: CCACCTTGCACATATCTGCAGTGAGGCTACATAAGAAGCGAACAAAACTATCAGCCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR TCA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGTGCTGCCTCCCCATCTaGGGGAATCCTCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: PWIFNKILGTTVKLMELKCCLPI*GNPLEE
Trigger: CTCTTCCAGAGGATTCCCTCAGATGGGGAGGCAGCA...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR TCA 90 bp ATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCAAGCACCACAGCTAGGTaGCGCGCAAAACCCAAAAGC +
Preference number: 2 (lower is better)
Translates to: MSCPRQRIVHGSSTRFWASTTAR*RAKPKS
Trigger: GCTTTTGGGTTTTGCGCGTCACCTAGCTGTGGTGCT...TGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGGTGGCCGGTGCCTACTaGAGTGGACAACAATACAGC +
Preference number: 2 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMVAGAY*SGQQYS
Trigger: GCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCAC...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTaGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTG +
Preference number: 2 (lower is better)
Translates to: YQLLLQEVAKTQENE*PEAKNRPWIFNKIL
Trigger: CAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR TCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTAGCACAGTCCTTGATTaGGTCATGGGGATTCTAGGA +
Preference number: 2 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVSTVLD*VMGILG
Trigger: TCCTAGAATCCCCATGACTCAATCAAGGACTGTGCT...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCTCACTGCAGATATGTaGAAGGTGGAGGCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMLTADM*KVEAKH
Trigger: GTGCTTGGCCTCCACCTTGCACATATCTGCAGTGAG...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp ATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCATTGGGAACACCCCTATaGCCACATGACTCATCTGGC +
Preference number: 2 (lower is better)
Translates to: MSCPRQRIVHGSSTRFWALGTPL*PHDSSG
Trigger: GCCAGATGAGTCATGTGGGCATAGGGGTGTTCCCAA...TGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 90 bp ATCTCGGCCTGGGGTCTGAGTCCTGATGGGAATTCCTTTCACTGCTaGAAAGTTCTCGTGGCAAAGAACTTCCTCTGTATCAACAATACC +
Preference number: 2 (lower is better)
Translates to: ISAWGLSPDGNSFHC*KVLVAKNFLCINNT
Trigger: GGTATTGTTGATACAGAGGAAGTTCTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAATTCCCATCAGGACTCAGACCCCAGGCCGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 90 bp GAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTaGGGCACTACTGTCAAGCTGATGGAGCTAAAGCCTAACACGTGT +
Preference number: 2 (lower is better)
Translates to: ELPEAKNRPWIFNKI*GTTVKLMELKPNTC
Trigger: ACACGTGTTAGGCTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGAGTGCGATGGAGGAACTaGACTTCTATTTCATGCCAG +
Preference number: 2 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRVRWRN*TSISCQ
Trigger: CTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCAC...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGAGGAGATGCGGAGGCTaGAGGATCTGGAATACCTAT +
Preference number: 2 (lower is better)
Translates to: PWIFNKILGTTVKLMELKRRCGG*RIWNTY
Trigger: ATAGGTATTCCAGATCCTCCAGCCTCCGCATCTCCT...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CCA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGCCTTACCCAGTGCGATaGAGGAACTGCACTTCTATT +
Preference number: 2 (lower is better)
Translates to: PWIFNKILGTTVKLMELKPYPVR*RNCTSI
Trigger: AATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGG...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR GCA 90 bp ATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCAGCATCAATTCCAGAATaGATGCTTCTGGGAGGTTTA +
Preference number: 2 (lower is better)
Translates to: MSCPRQRIVHGSSTRFWAASIPE*MLLGGL
Trigger: TAAACCTCCCAGAAGCATGCATTCTGGAATTGATGC...TGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp AGCCCGTCCCCTCCCCACCGGAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: SPSPPHRRQVTD*VCPVRMRSQRP
Trigger: AGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGGGAGGGGACGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR GCA 72 bp TCCCCTCCCCACCGGAGACAGGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: SPPHRRQVTDWV*PVRMRSQRPAV
Trigger: AACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGGGAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR GCA 72 bp GGCAGTGCTTGGTGCCTGGCAGGGCCTCAAGCAGTGTaGTATGCGAAGGCAGAGGCATCCCCTGGAGCAGGG +
Preference number: 3 (lower is better)
Translates to: GSAWCLAGPQAV*YAKAEASPGAG
Trigger: CCCTGCTCCAGGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCCTGCCAGGCACCAAGCACTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CAA 90 bp TTTGATGGTGCGGTCCTGGGAGGCAGAGTAGAGAAGCCCGTCCCCTCCCCACCGCACAGCGGCCTGCAGTaGTGTCCCAGATCCGCACAC +
Preference number: 3 (lower is better)
Translates to: FDGAVLGGRVEKPVPSPPHSGLQ*CPRSAH
Trigger: GTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG...CGGTGGGGAGGGGACGGGCTTCTCTACTCTGCCTCCCAGGACCGCACCATCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR GCA 72 bp TGCTTGGTGCCTGGCAGGGCCTCAAGCAGTGTGCTATaGGAAGGCAGAGGCATCCCCTGGAGCAGGGCTGAC +
Preference number: 3 (lower is better)
Translates to: CLVPGRASSSVL*EGRGIPWSRAD
Trigger: GTCAGCCCTGCTCCAGGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCCTGCCAGGCACCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp CTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCGCACACTGCCATCCTT +
Preference number: 3 (lower is better)
Translates to: LGVPGEDALTAA*SCVPDPHTAIL
Trigger: AAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CAA 90 bp ACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTCCTGCTTCCCTGTGCTaGGGTCCCAGAGGAGAATCT +
Preference number: 3 (lower is better)
Translates to: TGDRLGVPGEDALTAACSPASLC*GPRGES
Trigger: AGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGG...ACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR TCA 72 bp GTTCAAAGGCCCCAGTGCGCAGGGCATAGTCAGTGCTaGGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: VQRPQCAGHSQC*GPWCSPSGRGL
Trigger: AAGGCCACGGCCACTGGGTGAACACCATGGCCCTCAGCACTGACTATGCCCTGCGCACTGGGGCCTTTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR GCA 72 bp CACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGGCCACATAGCGGCACT +
Preference number: 3 (lower is better)
Translates to: HSGLQLCPRSAH*HPWSCWPHSGT
Trigger: AGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR CCA 72 bp GAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCAGAGGCCGAGTCGAGG +
Preference number: 3 (lower is better)
Translates to: EGVCTAISAFVL*QGRQLAEAESR
Trigger: CCTCGACTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR CCA 72 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTaGTGGGGAGGGTGTGTGCACTGCCATCTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: EDSRPHAFSGPH*WGGCVHCHLSL
Trigger: AAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR CCA 72 bp TGTCCCAGATCCGCACACTGCCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAGGGTTCGCATGGAGGG +
Preference number: 3 (lower is better)
Translates to: CPRSAHCHPWSC*PHSGTQGSHGG
Trigger: CCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CAA 90 bp GCCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGGAGAATCTGGCCATTCTaGCAGCCTGAGGCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: AILGAAGHIAALRVRMEGRIWPF*QPEASF
Trigger: GAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCT...CCCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CAA 90 bp CTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATAGAATCTGGCCATTCTaGCAGCCTGAGGCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: LGVPGEDALTAACSCVPDRIWPF*QPEASF
Trigger: GAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCT...ATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR CCA 72 bp GACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: DSRPHAFSGPHW*GGCVHCHLSLC
Trigger: ACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR CCA 72 bp CTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCG +
Preference number: 3 (lower is better)
Translates to: LQLCPRSAHCHP*SCWPHSGTQGS
Trigger: CGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CAA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGCTGCCATCTCAGCCTTaGTTCTCTGGCAGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: PIPVYRGQQATRILRSPLLPSQP*FSGREG
Trigger: GCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAG...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR GCA 72 bp TTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: FSGPHWWGGCVH*HLSLCSLAGKA
Trigger: TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
3UTR GCA 72 bp GTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTaGAGTACCTTGCACCTTCCATCTGACCTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: VHASGQGFHTQC*STLHLPSDLPG
Trigger: CCCAGGCAGGTCAGATGGAAGGTGCAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp TTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACTCAGGGTTCGCATGGA +
Preference number: 3 (lower is better)
Translates to: LCPRSAHCHPWS*WPHSGTQGSHG
Trigger: TCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
3UTR-3UTR CAA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGCTGCCATCTCAGCCTTaGTTCTCTGGCAGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: VTTSCDLRFLALGCATGGLPSQP*FSGREG
Trigger: GCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAG...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp TGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCTaGAGACAGCCTCAGATGGGCTGGCTGGCACCCACC +
Preference number: 3 (lower is better)
Translates to: CRSSSTLKSALC*RQPQMGWLAPT
Trigger: GGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAGCAGACTTTAGGGTGCTGGATGACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp AAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTaGCGTAGTCCAGTGCAAGGGCGGGGGCTGGACAAT +
Preference number: 3 (lower is better)
Translates to: KRGKASAWSVWF*RSPVQGRGLDN
Trigger: ATTGTCCAGCCCCCGCCCTTGCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp GCTCATACTGCTGCCTCCCCATCTGAGGGAATCCTCTaGAAGAGCCATCACCTTCCCCGCTCTATCCCATGG +
Preference number: 3 (lower is better)
Translates to: AHTAASPSEGIL*KSHHLPRSIPW
Trigger: CCATGGGATAGAGCGGGGAAGGTGATGGCTCTTCCAGAGGATTCCCTCAGATGGGGAGGCAGCAGTATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp GTGTTACTGCCTCAGTGTCCGTGCAGCCAACACAGCTaGGGTGGGGAAGTGGTGCAAGCCCTACAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: VLLPQCPCSQHS*GGEVVQALQSE
Trigger: CTCACTTTGTAGGGCTTGCACCACTTCCCCACCCCAGCTGTGTTGGCTGCACGGACACTGAGGCAGTAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp TCACGTGCCTATGGGAATCTAATGCCTCTGCTGATCTaGCAGGAGGCAGAGCTCAGGTGGTACCCTGAGCCG +
Preference number: 3 (lower is better)
Translates to: SRAYGNLMPLLI*QEAELRWYPEP
Trigger: CGGCTCAGGGTACCACCTGAGCTCTGCCTCCTGTCAGATCAGCAGAGGCATTAGATTCCCATAGGCACGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp AACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATaGTGCAGACAGCCTCAGATGGGCTGGCTGGCACCC +
Preference number: 3 (lower is better)
Translates to: NCRSSSTLKSAL*CRQPQMGWLAP
Trigger: GGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp GTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTaGTGCAGTACCTTGCACCTTCCATCTGACCTGCCT +
Preference number: 3 (lower is better)
Translates to: VVHASGQGFHTQ*CSTLHLPSDLP
Trigger: AGGCAGGTCAGATGGAAGGTGCAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp AGATCGTGTCCATCGGGCCGGAGGAGATGCGGAGGCTaGAGGATCTGGAATACCTATTTCCCTGTTAAGGGG +
Preference number: 3 (lower is better)
Translates to: RSCPSGRRRCGG*RIWNTYFPVKG
Trigger: CCCCTTAACAGGGAAATAGGTATTCCAGATCCTCCAGCCTCCGCATCTCCTCCGGCCCGATGGACACGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp AGGGCTTTGGAGGTTGGGAACACCCCTATGCCCACATaGCTCATCTGGCTAGCTTTCCTTCTGCCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: RALEVGNTPMPT*LIWLAFLLPGS
Trigger: TGACCCAGGCAGAAGGAAAGCTAGCCAGATGAGTCATGTGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp CAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTaGAAGGGCGGGGGCTGGACAATCTCATTTAGCACA +
Preference number: 3 (lower is better)
Translates to: QVPGQCGFGVVQ*KGGGWTISFST
Trigger: TGTGCTAAATGAGATTGTCCAGCCCCCGCCCTTGCACTGGACTACGCCAAAACCACACTGACCAGGCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp GTCAAGCTGATGGAGCTAAAGCCTAACACGTGTTACTaGCTCAGTGTCCGTGCAGCCAACACAGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: VKLMELKPNTCY*LSVRAANTAGV
Trigger: CACCCCAGCTGTGTTGGCTGCACGGACACTGAGGCAGTAACACGTGTTAGGCTTTAGCTCCATCAGCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp AGCTTCGCTTGCTCGCCCACCAATCTCCTCCTGCTGTaGTATCCAGTTCCTAACAGGCCATGGACTGCTATC +
Preference number: 3 (lower is better)
Translates to: SFACSPTNLLLL*YPVPNRPWTAI
Trigger: GATAGCAGTCCATGGCCTGTTAGGAACTGGATAGCACAGCAGGAGGAGATTGGTGGGCGAGCAAGCGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp GATGAAGCTTCGCTTGCTCGCCCACCAATCTCCTCCTaGTGTGCTATCCAGTTCCTAACAGGCCATGGACTG +
Preference number: 3 (lower is better)
Translates to: DEASLARPPISS*CAIQFLTGHGL
Trigger: CAGTCCATGGCCTGTTAGGAACTGGATAGCACAGCAGGAGGAGATTGGTGGGCGAGCAAGCGAAGCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp TCAAGCAGTGTGCTATGCGAAGGCAGAGGCATCCCCTaGAGCAGGGCTGACCAGCAGAACTCTCTTGATGAT +
Preference number: 3 (lower is better)
Translates to: SSSVLCEGRGIP*SRADQQNSLDD
Trigger: ATCATCAAGAGAGTTCTGCTGGTCAGCCCTGCTCCAGGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp AGAAGTCCAAAGCCAGGGAACCAGGGCTTTGGAGGTTaGGAACACCCCTATGCCCACATGACTCATCTGGCT +
Preference number: 3 (lower is better)
Translates to: RSPKPGNQGFGG*EHPYAHMTHLA
Trigger: AGCCAGATGAGTCATGTGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCTGGTTCCCTGGCTTTGGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CAA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCAATTCCTTTCACTGCTaGAAAGTTCTCGTGGCAAAG +
Preference number: 3 (lower is better)
Translates to: ALRNQSHETYHTTSTLRANSFHC*KVLVAK
Trigger: CTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAATT...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp ATATGTGCAAGGTGGAGGCCAAGCACCACAGCTAGGTaGCGCGCAAAACCCAAAAGCACAGACAAGGGTGGA +
Preference number: 3 (lower is better)
Translates to: ICARWRPSTTAR*RAKPKSTDKGG
Trigger: TCCACCCTTGTCTGTGCTTTTGGGTTTTGCGCGTCACCTAGCTGTGGTGCTTGGCCTCCACCTTGCACATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp GCCTGGTGCAGTCTGAGAGCACAGCAGACAAACAGCTaGCACCAAGGAGCTCAGTGGCTGATAGTTTTGTTC +
Preference number: 3 (lower is better)
Translates to: AWCSLRAQQTNS*HQGAQWLIVLF
Trigger: GAACAAAACTATCAGCCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTGTGCTCTCAGACTGCACCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp AAGGACCCAGTGTCTGTGTCCCTTGCATGTGAAATGTaGTGTCTCTGTGCTGAGATCCCAGAAGCGCACGGT +
Preference number: 3 (lower is better)
Translates to: KDPVSVSLACEM*CLCAEIPEAHG
Trigger: ACCGTGCGCTTCTGGGATCTCAGCACAGAGACACCACATTTCACATGCAAGGGACACAGACACTGGGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
3UTR TCA 72 bp GCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTaGCAACTTCCTGTGACCTTCGATTTCTGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: ARYRVADTGQVQ*QLPVTFDFWLW
Trigger: CCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp AGGCCATGGACTGCTATCAGTTGGTGGCCCAAGGGTTaGGGACCCCTGGCGTATAAGAAATATGGAATGAGG +
Preference number: 3 (lower is better)
Translates to: RPWTAISWWPKG*GPLAYKKYGMR
Trigger: CCTCATTCCATATTTCTTATACGCCAGGGGTCCTCAACCCTTGGGCCACCAACTGATAGCAGTCCATGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp CAATACTGGAGGCCTTACCCAGTGCGATGGAGGAACTaGACTTCTATTTCATGCCAGCAGTCACATGTGGCC +
Preference number: 3 (lower is better)
Translates to: QYWRPYPVRWRN*TSISCQQSHVA
Trigger: GGCCACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCAGTATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp AATGTAGAAACTGTGGGAGCCCTGAGCTTGTTTTCCTaGAACGAGAGGGTCCCATTTGGGGGTGATGGGAGA +
Preference number: 3 (lower is better)
Translates to: NVETVGALSLFS*NERVPFGGDGR
Trigger: TCTCCCATCACCCCCAAATGGGACCCTCTCGTTGCAGGAAAACAAGCTCAGGGCTCCCACAGTTTCTACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp GGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTaGCCGGTGCCTACTGCAGTGGACAACAATACAGCC +
Preference number: 3 (lower is better)
Translates to: GTALLFHASSHM*PVPTAVDNNTA
Trigger: GGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CAA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCATCCTCATCAAAAGTTTaGGAGCTTGAGAACCTTCCA +
Preference number: 3 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPSSSKV*ELENLP
Trigger: TGGAAGGTTCTCAAGCTCCAAAACTTTTGATGAGGA...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp CATTCAGGGCAAGATCTCGGCCTGGGGTCTGAGTCCTaGTGGGAATTCCTTTCACTGCTTGAAAGTTCTCGT +
Preference number: 3 (lower is better)
Translates to: HSGQDLGLGSES*WEFLSLLESSR
Trigger: ACGAGAACTTTCAAGCAGTGAAAGGAATTCCCATCAGGACTCAGACCCCAGGCCGAGATCTTGCCCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp ATTTCATGCCAGCAGTCACATGTGGCCGGTGCCTACTaGAGTGGACAACAATACAGCCCTAGATTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: ISCQQSHVAGAY*SGQQYSPRFSL
Trigger: CAAGGAGAATCTAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGCATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp TTCTGTGTGCTGTCCAATACTGGAGGCCTTACCCAGTaGGATGGAGGAACTGCACTTCTATTTCATGCCAGC +
Preference number: 3 (lower is better)
Translates to: FCVLSNTGGLTQ*DGGTALLFHAS
Trigger: GCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp TGTGCTGTCCAATACTGGAGGCCTTACCCAGTGCGATaGAGGAACTGCACTTCTATTTCATGCCAGCAGTCA +
Preference number: 3 (lower is better)
Translates to: CAVQYWRPYPVR*RNCTSISCQQS
Trigger: TGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp GCAAAGAACTTCCTCTGTATCAACAATACCCACTTCTaGTCAGAGCTCATACTGCTGCCTCCCCATCTGAGG +
Preference number: 3 (lower is better)
Translates to: AKNFLCINNTHF*SELILLPPHLR
Trigger: CCTCAGATGGGGAGGCAGCAGTATGAGCTCTGAGCAGAAGTGGGTATTGTTGATACAGAGGAAGTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp ATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTaGTTTATGCTGCAGACAGCCTCAGATGGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: IKELQVIQHPKV*FMLQTASDGLA
Trigger: AGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp TGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTaGCCGAGGCAAAGAATCGTCCATGGATCTTCAACA +
Preference number: 3 (lower is better)
Translates to: CYRRWPRHRRMS*PRQRIVHGSST
Trigger: TGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp GCACAGCAGACAAACAGCTGGCACCAAGGAGCTCAGTaGCTGATAGTTTTGTTCGCTTCTTATGTAGCCTCA +
Preference number: 3 (lower is better)
Translates to: AQQTNSWHQGAQ*LIVLFASYVAS
Trigger: TGAGGCTACATAAGAAGCGAACAAAACTATCAGCCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp CCTCCCATACAATTCACAATAGGGTTCACGTGCCTATaGGAATCTAATGCCTCTGCTGATCTGACAGGAGGC +
Preference number: 3 (lower is better)
Translates to: PPIQFTIGFTCL*ESNASADLTGG
Trigger: GCCTCCTGTCAGATCAGCAGAGGCATTAGATTCCCATAGGCACGTGAACCCTATTGTGAATTGTATGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp CTTGTTTTCCTGCAACGAGAGGGTCCCATTTGGGGGTaGTGGGAGACAATGACAGATCATCAGGCATTAGAT +
Preference number: 3 (lower is better)
Translates to: LVFLQREGPIWG*WETMTDHQALD
Trigger: ATCTAATGCCTGATGATCTGTCATTGTCTCCCATCACCCCCAAATGGGACCCTCTCGTTGCAGGAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp CAGCAGAACTCTCTTGATGATGAAAACCTTTCTGTGTaGTGTCCAATACTGGAGGCCTTACCCAGTGCGATG +
Preference number: 3 (lower is better)
Translates to: QQNSLDDENLSV*CPILEALPSAM
Trigger: CATCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACACAGAAAGGTTTTCATCATCAAGAGAGTTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp AAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTaGAGGTCATCCAGCACCCTAAAGTCTGCTTTATGC +
Preference number: 3 (lower is better)
Translates to: KSGLGLGPSLKN*RSSSTLKSALC
Trigger: GCATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp ACTGCAGTGGACAACAATACAGCCCTAGATTCTCCTTaGCCACTATCACAACTGGCCTCTCTCTTACCAACA +
Preference number: 3 (lower is better)
Translates to: TAVDNNTALDSP*PLSQLASLLPT
Trigger: TGTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGCTGTATTGTTGTCCACTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp TTGATGATGAAAACCTTTCTGTGTGCTGTCCAATACTaGAGGCCTTACCCAGTGCGATGGAGGAACTGCACT +
Preference number: 3 (lower is better)
Translates to: LMMKTFLCAVQY*RPYPVRWRNCT
Trigger: AGTGCAGTTCCTCCATCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACACAGAAAGGTTTTCATCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp GGGGGCTGGACAATCTCATTTAGCACAGTCCTTGATTaGGTCATGGGGATTCTAGGACAAGGAATTAGAACC +
Preference number: 3 (lower is better)
Translates to: GGWTISFSTVLD*VMGILGQGIRT
Trigger: GGTTCTAATTCCTTGTCCTAGAATCCCCATGACTCAATCAAGGACTGTGCTAAATGAGATTGTCCAGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp TCCTTCTGCCTGGGTCAAGAAGCATCAATTCCAGAATaGATGCTTCTGGGAGGTTTAAGGATTAAGCCACTC +
Preference number: 3 (lower is better)
Translates to: SFCLGQEASIPE*MLLGGLRIKPL
Trigger: GAGTGGCTTAATCCTTAAACCTCCCAGAAGCATGCATTCTGGAATTGATGCTTCTTGACCCAGGCAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp CAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATaGATCTTCAACAAGATTTTGGGCACTACTGTCAAG +
Preference number: 3 (lower is better)
Translates to: QENELPEAKNRP*IFNKILGTTVK
Trigger: CTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR-3UTR CAA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCATTTAGCACAGTCCTaGATTGAGTCATGGGGATTC +
Preference number: 3 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMHLAQS*IESWGF
Trigger: GAATCCCCATGACTCAATCAAGGACTGTGCTAAATG...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp TGGTTGGAAATATCCCATAATGAGGAGGTACAGGCTTaGGTCATGCATCTTTGCACCTGTTTCCTGCGTCAA +
Preference number: 3 (lower is better)
Translates to: WLEISHNEEVQA*VMHLCTCFLRQ
Trigger: TTGACGCAGGAAACAGGTGCAAAGATGCATGACTCAAGCCTGTACCTCCTCATTATGGGATATTTCCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR GCA 72 bp AATGTTCCCCTTCCAAAGCCATTGGTTTTTAGACTCTaGAATTCAGTGCCCATGATTGTGAGTAGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: NVPLPKPLVFRL*NSVPMIVSRLG
Trigger: TCCCAGCCTACTCACAATCATGGGCACTGAATTGCAGAGTCTAAAAACCAATGGCTTTGGAAGGGGAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp GAAAAATACAGAAATAGCTGTCATGGACAGACGTGGTaGCCCATGAACTGTCAAACTAGCTTGAGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: EKYRNSCHGQTW*PMNCQTSLSSG
Trigger: TCCAGAGCTCAAGCTAGTTTGACAGTTCATGGGCCACCACGTCTGTCCATGACAGCTATTTCTGTATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp TGCATGCTTCTGGGAGGTTTAAGGATTAAGCCACTCTaGGGCCCACTAGGAATGCAAACGAATGTATTTTTC +
Preference number: 3 (lower is better)
Translates to: CMLLGGLRIKPL*GPLGMQTNVFF
Trigger: GAAAAATACATTCGTTTGCATTCCTAGTGGGCCCCAGAGTGGCTTAATCCTTAAACCTCCCAGAAGCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR TCA 72 bp GAGCAGTTTATACAAGGATGGTTTGGAAATCCAATCTaGGTAGTTCAGACCATGACCCTGCTTAGCATGGGA +
Preference number: 3 (lower is better)
Translates to: EQFIQGWFGNPI*VVQTMTLLSMG
Trigger: TCCCATGCTAAGCAGGGTCATGGTCTGAACTACTCAGATTGGATTTCCAAACCATCCTTGTATAAACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp ACACAAAACTTAAGTTACTTATTTGGTCATAGAACCTaGGATCTGACCCTGTACAGAGCTGACACTAGGGGC +
Preference number: 3 (lower is better)
Translates to: TQNLSYLFGHRT*DLTLYRADTRG
Trigger: GCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTAACTTAAGTTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CCA 72 bp TTTAATCCCAGCTTTCTCTTACTAGATGTGAGGGCATaGGCTAATCATTTCTTATGTTGTTTCCTCATCAAA +
Preference number: 3 (lower is better)
Translates to: FNPSFLLLDVRA*ANHFLCCFLIK
Trigger: TTTGATGAGGAAACAACATAAGAAATGATTAGCCCATGCCCTCACATCTAGTAAGAGAAAGCTGGGATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTCCCACCGGAGACAGGTaGCCGACTGGGTGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TGDRLGVPGEDALTAACSPTGDR*PTGCAR
Trigger: CCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGG...ACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp CCACCGGAGACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGCTCGTCCGGCACTGCTaGCGCCATCCTGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PPETGDRLGVPGEDALTALVRHC*RHPASP
Trigger: TGGGGACGCAGGATGGCGGCAGCAGTGCCGGACGAG...CGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp CCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCGCAGCCTGTCCGGGGTaGTGTCCACGGGCACGTCGA +
Preference number: 4 (lower is better)
Translates to: PSGRGLAESGTAHRHELSAACPG*CPRARR
Trigger: TCGACGTGCCCGTGGACATCACCCCGGACAGGCTGC...GGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp ACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCACTGGGTGTGCCCGGTaGGGATGCGCTCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: TDWVCPVRMRSQRPAVVSTGCAR*GCAHSG
Trigger: GCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGT...GGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCCACACCCACCGGCACTaGTGCCGCCATCCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRAHTHRH*CRHPAS
Trigger: GGACGCAGGATGGCGGCAGCAGTGCCGGTGGGTGTG...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586869.5
CDS-3UTR CCA 90 bp GTCCCCTCCCCACCGGAGACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGGTGATCCACTTGCTGTaGCCAGCGAGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VPSPPETGDRLGVPGEDAVIHLL*PARVLP
Trigger: GGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCAC...CGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGGGAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GTCCCCTCCCCACCGGAGACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCACTCAGGGTTCGCATaGAGGGGCTCCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VPSPPETGDRLGVPGEDAHSGFA*RGSQLR
Trigger: CCTGAGCTGGGAGCCCCTCCATGCGAACCCTGAGTG...CGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGGGAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGACTGGGTGTGCCCGGTaGGGATGCGCTCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGTGCAR*GCAHSG
Trigger: GCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGT...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCACTGGGTGTGCCCGGTaGGGATGCGCTCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCTGCAR*GCAHSG
Trigger: GCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGT...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp GTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCAGACACTGGGTGTGCCCGGTaGGGATGCGCTCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: VAVALQSPAQHTVMSSPDTGCAR*GCAHSG
Trigger: GCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGT...GTCTGGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTCCCACCGGAGACAGGTaGCCGACTGGGTGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCPTGDR*PTGCAR
Trigger: CCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGG...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp TGCCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGCCCACCGGAGACAGGTaGCCGACTGGGTGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: CHPWSCWPHSGTQGSHGGPTGDR*PTGCAR
Trigger: CCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGG...CCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCCTCGTCCGGCACTGCTaGCGCCATCCTGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCLVRHC*RHPASP
Trigger: TGGGGACGCAGGATGGCGGCAGCAGTGCCGGACGAG...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360831.9
ENST00000442241.9
CDS-3UTR GCA 90 bp GCCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGGCTCGTCCGGCACTGCTaGCGCCATCCTGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AILGAAGHIAALRVRMEGLVRHC*RHPASP
Trigger: TGGGGACGCAGGATGGCGGCAGCAGTGCCGGACGAG...CCCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGATACCACCAGCACCCTaGGGGCCCGGGGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMIPPAP*GPGVWQ
Trigger: CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTAT...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCATACCACCAGCACCCTaGGGGCCCGGGGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCIPPAP*GPGVWQ
Trigger: CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTAT...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCGGCAGGGGATCCTCCTaGGCCAGTAGCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: PSGRGLAESGTAHRHELSGRGSS*ASSALH
Trigger: GTGCAACGCGCTACTGGCCCAGGAGGATCCCCTGCC...GGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp GTCCCCTCCCCACCGGAGACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGTGTCTCCAGAGCCACTaGCCAGGTACCTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VPSPPETGDRLGVPGEDACLQSH*PGTWAS
Trigger: ACTGGCCCAGGTACCTGGCCAGTGGCTCTGGAGACA...CGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588642.1
CDS-3UTR TCA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCGCAGCCTGTCCGGGGTaGTGTCCACGGGCACGTCGA +
Preference number: 4 (lower is better)
Translates to: GCPPPLSVPARYRVADTGAACPG*CPRARR
Trigger: TCGACGTGCCCGTGGACATCACCCCGGACAGGCTGC...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGCCCAGCTCAGGCCTGTaGTCCACTTGCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VTDWVCPVRMRSQRPAVVPSSGL*STCCGQ
Trigger: CTGGCCACAGCAAGTGGATCACAGGCCTGAGCTGGG...CACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp GAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACCCCAGCTCAGGCCTGTaGTCCACTTGCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EGHGVHPVAVALQSPAQHPSSGL*STCCGQ
Trigger: CTGGCCACAGCAAGTGGATCACAGGCCTGAGCTGGG...GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCTGTCACTGCTGCCGCTaGCCAGGAGCCGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRACHCCR*PGADCQ
Trigger: CTGACAGTCGGCTCCTGGTCAGCGGCAGCAGTGACA...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTCGCCTCGTCCGGCACTaGTGCCGCCATCCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTRLVRH*CRHPAS
Trigger: GGACGCAGGATGGCGGCAGCAGTGCCGGACGAGGCG...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360831.9
ENST00000442241.9
CDS-3UTR GCA 90 bp GGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GDRLGVPGEDALTAACSCALHTS*SLSGVM
Trigger: CATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGC...ACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp CCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PSGRGLAESGTAHRHELSALHTS*SLSGVM
Trigger: CATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGC...GGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp GAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCGGCCAGCGAGGGTCCTaGCCACCTGCTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EDALTAACSCVPDPHTAIGQRGS*PPASLC
Trigger: GCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCC...GATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GDRLGVPGEDALTAACSCVTDWV*PVRMRS
Trigger: TGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC...ACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATCTCAGGCCAGGCCATaGCAGGCTCAGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPSQARP*QAQPLP
Trigger: GGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGA...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGCCATCCAGATCACCGTaGGGCGCAAGGAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVPSRSP*GARNPG
Trigger: GCCGGGGTTCCTTGCGCCGCACGGTGATCTGGATGG...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGCCACCGCCTCGTCCTaGGCGAGCAAGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGATASS*ASKWGG
Trigger: CCCGCCCCACTTGCTCGCGCAGGACGAGGCGGTGGC...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAGGCAGGGGATCCTCCTaGGCCAGTAGCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPGRGSS*ASSALH
Trigger: GTGCAACGCGCTACTGGCCCAGGAGGATCCCCTGCC...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTTATACCTCATCCGCGTaGCCGGGCAGGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRYTSSA*PGRSMA
Trigger: GGCCATGGACCTGCCCGGCCACGCGGATGAGGTATA...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTTCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRSGPHW*GGCVHC
Trigger: GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGA...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTCCCAGAAGCGCACGGTaGTGTCTCCAGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: QVTDWVCPVRMRSQRPAVPRSAR*CLQSHW
Trigger: CCAGTGGCTCTGGAGACACCACCGTGCGCTTCTGGG...AACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAGGCAGAGGCATCCCCTaGAGCAGGGCTGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCAGRGIP*SRADQQ
Trigger: CTGCTGGTCAGCCCTGCTCCAGGGGATGCCTCTGCC...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAGGCAGAGGCATCCCCTaGAGCAGGGCTGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPGRGIP*SRADQQ
Trigger: CTGCTGGTCAGCCCTGCTCCAGGGGATGCCTCTGCC...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGCCCCGCTCTATCCCATaGGCCCAGGGCAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVPRSIP*AQGSAW
Trigger: CCAAGCACTGCCCTGGGCCCATGGGATAGAGCGGGG...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGGGGGCCCCATTCACCTaGAGGCATCTCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMGAPFT*RHLRPG
Trigger: GCCTGGCCTGAGATGCCTCCAGGTGAATGGGGCCCC...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGCAGCCTGTCCGGGGTaGTGTCCACGGGCACGTCGA +
Preference number: 4 (lower is better)
Translates to: DALTAACSCVPDPHTAILAACPG*CPRARR
Trigger: TCGACGTGCCCGTGGACATCACCCCGGACAGGCTGC...AAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGCCCACCGGAGACAGGTaGCCGACTGGGTGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: VCTAISAFVLWQGRQLAEPTGDR*PTGCAR
Trigger: CCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGG...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp GGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTCCCACCGGAGACAGGTaGCCGACTGGGTGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GGCVHCHLSLCSLAGKAAPTGDR*PTGCAR
Trigger: CCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGG...AGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTGTGGTGTCTCTGTGCTaGGATCCCAGAAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRVVSLC*DPRSAR
Trigger: CCGTGCGCTTCTGGGATCTCAGCACAGAGACACCAC...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGGTGTCTCTGTGCTaGGATCCCAGAAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: QVTDWVCPVRMRSQRPAVVVSLC*DPRSAR
Trigger: CCGTGCGCTTCTGGGATCTCAGCACAGAGACACCAC...AACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp CAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGCCATTCTTGCAGCCTaGGGCCAGCTTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: QVTDWVCPVRMRSQRPAVAILAA*GQLPAI
Trigger: GATGGCAGGAAGCTGGCCTCAGGCTGCAAGAATGGC...AACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp GGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACGCCATTCTTGCAGCCTaGGGCCAGCTTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: GPWCSPSGRGLAESGTAHAILAA*GQLPAI
Trigger: GATGGCAGGAAGCTGGCCTCAGGCTGCAAGAATGGC...GTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCGGGGAACCCAGCAGCTaGCCGCCCTCATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GCPPPLSVPARYRVADTGGEPSS*PPSSWN
Trigger: GTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCC...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCGGGGAACCCAGCAGCTaGCCGCCCTCATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: EDALTAACSCVPDPHTAIGEPSS*PPSSWN
Trigger: GTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCC...GATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVALHTS*SLSGVM
Trigger: CATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGC...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAGGGCCAGTAGCGCGTTaGACACGAGCTGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCAGPVAR*TRAAAC
Trigger: ACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCC...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCGGGCCAGTAGCGCGTTaGACACGAGCTGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCGPVAR*TRAAAC
Trigger: ACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCC...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGGGGCCAGTAGCGCGTTaGACACGAGCTGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGGPVAR*TRAAAC
Trigger: ACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCC...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCACCTCCAAGGAGCTGGTaGAGCGAGTCACAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: PVAVALQSPAQHTVMSSPPPRSW*SESQPG
Trigger: TCCGGGCTGTGACTCGCTGCACCAGCTCCTTGGAGG...TGGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp GAGATCCCAGAAGCGCACGGTGGTGTCTCCAGAGCCACTGGCCAGGTACCCCCTAGGGTCCTGCCCACCTaGTTCCCTGTGCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EIPEAHGGVSRATGQVPPRVLPT*FPVLGS
Trigger: GGACCCAAGCACAGGGAAGCAGGTGGGCAGGACCCT...AGGGGGTACCTGGCCAGTGGCTCTGGAGACACCACCGTGCGCTTCTGGGATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCGGCCAGCGAGGGTCCTaGCCACCTGCTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGGQRGS*PPASLC
Trigger: GCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCC...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TDWVCPVRMRSQRPAVVSPRSAH*HPWSCW
Trigger: CCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGG...GGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVALTAA*SCVPDP
Trigger: CGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGC...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: HPVAVALQSPAQHTVMSSALTAA*SCVPDP
Trigger: CGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGC...AGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCVTDWV*PVRMRS
Trigger: TGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGVTDWV*PVRMRS
Trigger: TGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LGVPGEDALTAACSCVPDVTDWV*PVRMRS
Trigger: TGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC...ATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATCTGGCTCTGGGGTGTaGCACAGGCGGGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPSGSGV*HRRGSV
Trigger: CACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGA...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAGGGCAGTGCTTGGTaGCTGGCAGGGCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCQGSAW*LAGPQA
Trigger: TGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTG...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCACCGGAGACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGTCTGTCTCCACTGCCTaGGACTCCAACGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PPETGDRLGVPGEDALTASVSTA*DSNVFP
Trigger: GGGGAAGACGTTGGAGTCCCAGGCAGTGGAGACAGA...CGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp CCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTGACCCTCCAAGGAGCTaGTGCAGCGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PWCSPSGRGLAESGTAHRDPPRS*CSESQP
Trigger: GGGCTGTGACTCGCTGCACCAGCTCCTTGGAGGGTC...ACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp AGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACAGTGATCCACTTGCTGTaGCCAGCGAGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RAMVFTQWPWPCRVRHSTVIHLL*PARVLP
Trigger: GGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCAC...TGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCACACTCAGGGTTCGCATaGAGGGGCTCCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPHSGFA*RGSQLR
Trigger: CCTGAGCTGGGAGCCCCTCCATGCGAACCCTGAGTG...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCACACTCAGGGTTCGCATaGAGGGGCTCCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVAVALQSPAQHTVMSSPHSGFA*RGSQLR
Trigger: CCTGAGCTGGGAGCCCCTCCATGCGAACCCTGAGTG...TGGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGTTCACCCAGTGGCCGTaGCCTTGCAGAGTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGFTQWP*PCRVRH
Trigger: GTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAA...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp AGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATACCCCACCCCTGGGCTaGGGCCAAGGCTACATAGGG +
Preference number: 4 (lower is better)
Translates to: RPHAFSGPHWWGGCVHCHTPPLG*GQGYIG
Trigger: CCCTATGTAGCCTTGGCCCCAGCCCAGGGGTGGGGT...ATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGGGAAGCCAGGTACCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRAGKPGT*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAGGTACCTGGCTTCCC...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588019.1
3UTR CAA 72 bp GCTGAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTaGCAGAGTCCGGCACAGCACACCGTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AEGHGVHPVAVA*QSPAQHTVMSS
Trigger: AGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGGAGCTCTCCAGACTTTaGTGGTGCGGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGELSRL*WCGPGR
Trigger: CCTCCCAGGACCGCACCATCAAAGTCTGGAGAGCTC...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATGAGCTCTCCAGACTTTaGTGGTGCGGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGVPGEDALTAACSCVPDELSRL*WCGPGR
Trigger: CCTCCCAGGACCGCACCATCAAAGTCTGGAGAGCTC...ATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAGGGCATAGTCAGTGCTaGGGGCCATGGTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCAGHSQC*GPWCSP
Trigger: GGGTGAACACCATGGCCCTCAGCACTGACTATGCCC...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCGTGGTGTCTCTGTGCTaGGATCCCAGAAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCVVSLC*DPRSAR
Trigger: CCGTGCGCTTCTGGGATCTCAGCACAGAGACACCAC...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTAGGACAGGACATATCTaGGGAAGCCTCGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRRTGHI*GSLGAL
Trigger: GAGAGCCCCGAGGCTTCCTCAGATATGTCCTGTCCT...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGGTGGCCCAAGGGTTaGGGACCCCTGGCGTATAAG +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVWWPKG*GPLAYK
Trigger: CTTATACGCCAGGGGTCCTCAACCCTTGGGCCACCA...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATGGTGGCCCAAGGGTTaGGGACCCCTGGCGTATAAG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPWWPKG*GPLAYK
Trigger: CTTATACGCCAGGGGTCCTCAACCCTTGGGCCACCA...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAECTSNR*TSRATA
Trigger: GGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCA...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCALHTS*SLSGVM
Trigger: CATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGC...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTGGGCCAGTAGCGCGTTaGACACGAGCTGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GCAHSGLQLCPRSAHCHPGPVAR*TRAAAC
Trigger: ACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCC...AGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCAGGGTCCTGCCCACCTaGTTCCCTGTGCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRARVLPT*FPVLGS
Trigger: GGACCCAAGCACAGGGAAGCAGGTGGGCAGGACCCT...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGGCCAGCGAGGGTCCTaGCCACCTGCTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VCTAISAFVLWQGRQLAEGQRGS*PPASLC
Trigger: GCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCC...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCGGCCAGCGAGGGTCCTaGCCACCTGCTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFGQRGS*PPASLC
Trigger: GCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCC...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TTTGATGGTGCGGTCCTGGGAGGCAGAGTAGAGAAGCCCGTCCCCTCCCCACCGCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FDGAVLGGRVEKPVPSPPPRSAH*HPWSCW
Trigger: CCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGG...CGGTGGGGAGGGGACGGGCTTCTCTACTCTGCCTCCCAGGACCGCACCATCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTCAGTGGCCGTGGCCTTaGAGAGTCCGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCQWPWP*RVRHST
Trigger: TGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTG...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGTTTGGCGTAGTCCAGTaGAAGGGCGGGGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMFGVVQ*KGGGWT
Trigger: TGTCCAGCCCCCGCCCTTGCACTGGACTACGCCAAA...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTATGGGCCCAGGGCAGTaGTTGGTGCCTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGMGPGQ*LVPGRA
Trigger: GGCCCTGCCAGGCACCAAGCACTGCCCTGGGCCCAT...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCCCATCCAGATCACCGTaGGGCGCAAGGAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSPSRSP*GARNPG
Trigger: GCCGGGGTTCCTTGCGCCGCACGGTGATCTGGATGG...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGTGCCCGCCCTCATCCTaGAACTGCACTAGCAACCGC +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGCPPSS*NCTSNR
Trigger: GCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCA...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCGGCAGGGGATCCTCCTaGGCCAGTAGCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSGRGSS*ASSALH
Trigger: GTGCAACGCGCTACTGGCCCAGGAGGATCCCCTGCC...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRHPWSC*PHSGTQ
Trigger: CTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATG...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: TGDRLGVPGEDALTAACSHPWSC*PHSGTQ
Trigger: CTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATG...ACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGC +
Preference number: 4 (lower is better)
Translates to: GDRLGVPGEDALTAACSCAHCHP*SCWPHS
Trigger: GCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGC...ACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCARQVTD*VCPVRM
Trigger: CATCCTCACCGGGCACACCCAGTCGGTCACCTGTCT...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPERQVTD*VCPVRM
Trigger: CATCCTCACCGGGCACACCCAGTCGGTCACCTGTCT...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTTCACCCAGTGGCCGTaGCCTTGCAGAGTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GCAHSGLQLCPRSAHCHPFTQWP*PCRVRH
Trigger: GTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAA...AGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp GTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCATGGTGTTCACCCAGTaGCCGTGGCCTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VCPVRMRSQRPAVVSQIRMVFTQ*PWPCRV
Trigger: GACTCTGCAAGGCCACGGCCACTGGGTGAACACCAT...GCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAGCTGACCACGCAATCTaGTACACGGCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPADHAI*YTAATW
Trigger: CCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGC...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCG +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCEAESR*GSERTS
Trigger: CGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTC...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCG +
Preference number: 4 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVEAESR*GSERTS
Trigger: CGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTC...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCG +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVEAESR*GSERTS
Trigger: CGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTC...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTCCCAGAAGCGCACGGTaGTGTCTCCAGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCPRSAR*CLQSHW
Trigger: CCAGTGGCTCTGGAGACACCACCGTGCGCTTCTGGG...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAGCCAGCAGTCACATGTaGCCGGTGCCTACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCAASSHM*PVPTAV
Trigger: CACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCCCCCGCTCTATCCCATaGGCCCAGGGCAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEAPRSIP*AQGSAW
Trigger: CCAAGCACTGCCCTGGGCCCATGGGATAGAGCGGGG...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGGCAAGATCTCGGCCTaGGGTCTGAGTCCTGATGGG +
Preference number: 4 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPEGKISA*GLSPDG
Trigger: CCCATCAGGACTCAGACCCCAGGCCGAGATCTTGCC...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGGGGGCCCCATTCACCTaGAGGCATCTCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAEGAPFT*RHLRPG
Trigger: GCCTGGCCTGAGATGCCTCCAGGTGAATGGGGCCCC...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGCGTCCTGACCCCAGTTaGGAGGGTGAAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPERPDPS*EGEGTG
Trigger: TCCTGTCCCTTCACCCTCCCAACTGGGGTCAGGACG...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTTGTCTCCAGAGCCACTaGCCAGGTACCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PWCSPSGRGLAESGTAHRCLQSH*PGTPSM
Trigger: CATGGAGGGGGTACCTGGCCAGTGGCTCTGGAGACA...ACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp AGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCCACTGGCCAGGTACCTaGGCCAGTAGCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: RMRSQRPAVVSQIRTLPSHWPGT*ASSALH
Trigger: GTGCAACGCGCTACTGGCCCAGGTACCTGGCCAGTG...GGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588642.1
CDS-3UTR TCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAGAGCCGACTGTCAGCTaGCCACGCAATCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPEPTVS*PRNLVH
Trigger: GTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTC...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCTGTCACTGCTGCCGCTaGCCAGGAGCCGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEACHCCR*PGADCQ
Trigger: CTGACAGTCGGCTCCTGGTCAGCGGCAGCAGTGACA...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGATGCCTCTGCTGATCTaGCAGGAGGCAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGMPLLI*QEAELR
Trigger: CCTGAGCTCTGCCTCCTGTCAGATCAGCAGAGGCAT...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGGCCAGCTTCCTGCTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LGPRGESGHSCSLRPASCCTSNR*TSRATA
Trigger: GGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCA...GCAGGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACCCCTCATCCTGGAACTaGACTAGCAACCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: EGHGVHPVAVALQSPAQHPSSWN*TSNRCT
Trigger: TGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGG...GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp TTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGGCCAGCTTCCTGCGGGGAACCCAGCAGCTaGCCGCCCTCATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LGPRGESGHSCSLRPASCGEPSS*PPSSWN
Trigger: GTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCC...GCAGGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACCCTCCAAGGAGCTGGTaGAGCGAGTCACAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHPPRSW*SESQPG
Trigger: TCCGGGCTGTGACTCGCTGCACCAGCTCCTTGGAGG...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACAGGGTCCTGCCCACCTaGTTCCCTGTGCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHRVLPT*FPVLGS
Trigger: GGACCCAAGCACAGGGAAGCAGGTGGGCAGGACCCT...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHALTAA*SCVPDP
Trigger: CGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGC...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp GATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: DALTAACSCVPDPHTAILALTAA*SCVPDP
Trigger: CGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGC...AAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCCAGTGGCCGTGGCCTTaGAGAGTCCGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGQWPWP*RVRHST
Trigger: TGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTG...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCCAGTGGCCGTGGCCTTaGAGAGTCCGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEAQWPWP*RVRHST
Trigger: TGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTG...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp GATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTCAGTGGCCGTGGCCTTaGAGAGTCCGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: DALTAACSCVPDPHTAILQWPWP*RVRHST
Trigger: TGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTG...AAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCGTTCAAAGGCCCCAGTaGGCAGGGCATAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCVQRPQ*AGHSQC
Trigger: GCACTGACTATGCCCTGCGCACTGGGGCCTTTGAAC...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGGGAAGCCAGGTACTTaGCCGTCCTGCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: LSRTAGHTHSQVPTGGEGGKPGT*PSCHPT
Trigger: TGTGGGATGGCAGGACGGGCAAGTACCTGGCTTCCC...ACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGGTCCTTCCCACCACTTaGCACTCTCTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVVLPTT*HSLAIW
Trigger: CCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGAC...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCATCTCAGGCCAGGCCATaGCAGGCTCAGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPSQARP*QAQPLP
Trigger: GGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGA...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCTGCCTCAGTGTCCGTaGAGCCAACACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GCPPPLSVPARYRVADTGLPQCP*SQHSWG
Trigger: ACCCCAGCTGTGTTGGCTGCACGGACACTGAGGCAG...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGCAGGGGATCCTCCTaGGCCAGTAGCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVGRGSS*ASSALH
Trigger: GTGCAACGCGCTACTGGCCCAGGAGGATCCCCTGCC...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGGACCCTCCAAGGAGCTaGTGCAGCGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAEDPPRS*CSESQP
Trigger: GGGCTGTGACTCGCTGCACCAGCTCCTTGGAGGGTC...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVHPWSC*PHSGTQ
Trigger: CTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATG...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPEHPWSC*PHSGTQ
Trigger: CTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATG...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TCAGTGCTGAGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: SVLRAMVFTQWPWPCRVRHPWSC*PHSGTQ
Trigger: CTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATG...CCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTCAGCACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGC +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCAHCHP*SCWPHS
Trigger: GCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGC...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTTCACCCAGTGGCCGTaGCCTTGCAGAGTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSFTQWP*PCRVRH
Trigger: GTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAA...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGATGGTGTTCACCCAGTaGCCGTGGCCTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVMVFTQ*PWPCRV
Trigger: GACTCTGCAAGGCCACGGCCACTGGGTGAACACCAT...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp AGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATAGCCTCTCTGGACCCTaGCCCCGCACGAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: RPHAFSGPHWWGGCVHCHSLSGP*PRTRLY
Trigger: ATACAACCTCGTGCGGGGCCAGGGTCCAGAGAGGCT...ATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTTACACGGCAGCCACGTaGCCGCGTAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGCVHCHLSLCSLAGKAAYTAAT*PRREAR
Trigger: CCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTA...AGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGTATACCTCATCCGCGTaGCCGGGCAGGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQYTSSA*PGRSMA
Trigger: GGCCATGGACCTGCCCGGCCACGCGGATGAGGTATA...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTTTCTCAGGTCCCCACTaGTGGGGAGGGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCFSGPH*WGGCVH
Trigger: GTGCACACACCCTCCCCACCAGTGGGGACCTGAGAA...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCTTCGATTTCTGGCTCTaGGGTGTGCCACAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRAFDFWL*GVPQAG
Trigger: CCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAA...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTCCCAGAAGCGCACGGTaGTGTCTCCAGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LTAACSCVPDPHTAILGAPRSAR*CLQSHW
Trigger: CCAGTGGCTCTGGAGACACCACCGTGCGCTTCTGGG...AGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGCAGACAGCCTCAGATaGGCTGGCTGGCACCCACCT +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEAADSLR*AGWHPP
Trigger: AGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGC...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGACCCCACCCCTGGGCTaGGGCCAAGGCTACATAGGG +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVTPPLG*GQGYIG
Trigger: CCCTATGTAGCCTTGGCCCCAGCCCAGGGGTGGGGT...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTCTGGCAGAGTGGTATaGGCACCCCACCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSSGRVV*APHPWA
Trigger: AGCCCAGGGGTGGGGTGCCCATACCACTCTGCCAGA...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCTGCGGGCCCGGGGTCTaGCAGAGTGGTATGGGCACC +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPCGPGV*QSGMGT
Trigger: GGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCA...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCAGCAGGAGCAGGGGATaGGCATGGGACGTCCTGACC +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEASRSRG*AWDVLT
Trigger: GGTCAGGACGTCCCATGCCCATCCCCTGCTCCTGCT...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGGGCGGGAGTCAGTCTaGTCGCCCGCCCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPEGRESV*SPAQKG
Trigger: GCCCTTCTGGGCGGGCGACCAGACTGACTCCCGCCC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586869.5
CDS-3UTR TCA 90 bp TGCCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGATGACTGCCTCACTGTaGCCCTCCAAGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CHPWSCWPHSGTQGSHGGMTASL*PSKELV
Trigger: CACCAGCTCCTTGGAGGGTCACAGTGAGGCAGTCAT...CCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGCCCAGCTCAGGCCTGTaGTCCACTTGCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGPSSGL*STCCGQ
Trigger: CTGGCCACAGCAAGTGGATCACAGGCCTGAGCTGGG...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGAGCTCTCCAGACTTTaGTGGTGCGGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLELSRL*WCGPGR
Trigger: CCTCCCAGGACCGCACCATCAAAGTCTGGAGAGCTC...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGGCATAGTCAGTGCTaGGGGCCATGGTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTGHSQC*GPWCSP
Trigger: GGGTGAACACCATGGCCCTCAGCACTGACTATGCCC...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CACTGCCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGCATAGTCAGTGCTaGGGGCCATGGTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: HCHPWSCWPHSGTQGSHGGHSQC*GPWCSP
Trigger: GGGTGAACACCATGGCCCTCAGCACTGACTATGCCC...TCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp ATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGTGGTGTCTCTGTGCTaGGATCCCAGAAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: MRSQRPAVVSQIRTLPSLVVSLC*DPRSAR
Trigger: CCGTGCGCTTCTGGGATCTCAGCACAGAGACACCAC...CAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACGCCATTCTTGCAGCCTaGGGCCAGCTTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHAILAA*GQLPAI
Trigger: GATGGCAGGAAGCTGGCCTCAGGCTGCAAGAATGGC...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCTGCTGCCTCCCCATCTaGGGGAATCCTCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRACCLPI*GNPLEE
Trigger: CTCTTCCAGAGGATTCCCTCAGATGGGGAGGCAGCA...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGAGCACCACAGCTAGGTaGCGCGCAAAACCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVSTTAR*RAKPKS
Trigger: GCTTTTGGGTTTTGCGCGTCACCTAGCTGTGGTGCT...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCACTCGTCCGGCACTGCTaGCGCCATCCTGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSLVRHC*RHPASP
Trigger: TGGGGACGCAGGATGGCGGCAGCAGTGCCGGACGAG...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360831.9
ENST00000442241.9
CDS-3UTR GCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTATGCACTAGCAACCGCTaGACATCGCGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALCTSNR*TSRATA
Trigger: GGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCA...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: CFPVLGSQRRIWPFLQPECTSNR*TSRATA
Trigger: GGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCA...CTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCGGGGAACCCAGCAGCTaGCCGCCCTCATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPGEPSS*PPSSWN
Trigger: GTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCC...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GCCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGGGCCAGTAGCGCGTTaGACACGAGCTGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AHLLPCAWVPEENLAILAGPVAR*TRAAAC
Trigger: ACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCC...TGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp GGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: GCAHSGLQLCPRSAHCHPCHPWS*WPHSGT
Trigger: AGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCA...AGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHPRSAH*HPWSCW
Trigger: CCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGG...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGALTAA*SCVPDP
Trigger: CGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGC...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAAGCGCTCACAGCGGCCTaGAGTTGTGTCCCAGATCCG +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKALTAA*SCVPDP
Trigger: CGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGC...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAACAGTGGCCGTGGCCTTaGAGAGTCCGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKQWPWP*RVRHST
Trigger: TGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTG...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCGGGAAGCCAGGTACTTaGCCGTCCTGCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSGKPGT*PSCHPT
Trigger: TGTGGGATGGCAGGACGGGCAAGTACCTGGCTTCCC...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGTCTGGCTCTGGGGTGTaGCACAGGCGGGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVSGSGV*HRRGSV
Trigger: CACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGA...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCTTTGGCGTAGTCCAGTaGAAGGGCGGGGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGFGVVQ*KGGGWT
Trigger: TGTCCAGCCCCCGCCCTTGCACTGGACTACGCCAAA...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGGTGGCCGGTGCCTACTaGAGTGGACAACAATACAGC +
Preference number: 4 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMVAGAY*SGQQYS
Trigger: GCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCAC...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGCAGGGCAGTGCTTGGTaGCTGGCAGGGCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: VCTAISAFVLWQGRQLAEQGSAW*LAGPQA
Trigger: TGCTTGAGGCCCTGCCAGGCACCAAGCACTGCCCTG...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGATGGGCCCAGGGCAGTaGTTGGTGCCTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLMGPGQ*LVPGRA
Trigger: GGCCCTGCCAGGCACCAAGCACTGCCCTGGGCCCAT...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAGCCAGGCTCAGCCACTaGCCACAGCTGCTAGACTCC +
Preference number: 4 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPARLSH*PQLLDS
Trigger: GGAGTCTAGCAGCTGTGGGCAGTGGCTGAGCCTGGC...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCCTGCCTCAGTGTCCGTaGAGCCAACACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGLPQCP*SQHSWG
Trigger: ACCCCAGCTGTGTTGGCTGCACGGACACTGAGGCAG...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCCCTAACACGTGTTACTaGCTCAGTGTCCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCPNTCY*LSVRAA
Trigger: GGCTGCACGGACACTGAGGCAGTAACACGTGTTAGG...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTTGCCCGCCCTCATCCTaGAACTGCACTAGCAACCGC +
Preference number: 4 (lower is better)
Translates to: DALTAACSCVPDPHTAILCPPSS*NCTSNR
Trigger: GCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCA...AAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAAGACCCTCCAAGGAGCTaGTGCAGCGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKDPPRS*CSESQP
Trigger: GGGCTGTGACTCGCTGCACCAGCTCCTTGGAGGGTC...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGGTGATCCACTTGCTGTaGCCAGCGAGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRVIHLL*PARVLP
Trigger: GGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCAC...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAAGTGATCCACTTGCTGTaGCCAGCGAGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKVIHLL*PARVLP
Trigger: GGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCAC...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCACACTCAGGGTTCGCATaGAGGGGCTCCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GVCTAISAFVLWQGRQLAHSGFA*RGSQLR
Trigger: CCTGAGCTGGGAGCCCCTCCATGCGAACCCTGAGTG...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGAGCCTCTCTGGACCCTaGCCCCGCACGAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQSLSGP*PRTRLY
Trigger: ATACAACCTCGTGCGGGGCCAGGGTCCAGAGAGGCT...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGCTGACCACGCAATCTaGTACACGGCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEAADHAI*YTAATW
Trigger: CCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGC...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGTATACCTCATCCGCGTaGCCGGGCAGGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGYTSSA*PGRSMA
Trigger: GGCCATGGACCTGCCCGGCCACGCGGATGAGGTATA...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCG +
Preference number: 4 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGEAESR*GSERTS
Trigger: CGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTC...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGTCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGSAFVL*QGRQLA
Trigger: TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGA...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGTCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVSGPHW*GGCVHC
Trigger: GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGA...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGTCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: VCTAISAFVLWQGRQLAESGPHW*GGCVHC
Trigger: GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGA...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGTTCGATTTCTGGCTCTaGGGTGTGCCACAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAEFDFWL*GVPQAG
Trigger: CCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAA...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTTCGATTTCTGGCTCTaGGGTGTGCCACAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHFDFWL*GVPQAG
Trigger: CCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAA...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGCCCAGAAGCGCACGGTaGTGTCTCCAGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGPRSAR*CLQSHW
Trigger: CCAGTGGCTCTGGAGACACCACCGTGCGCTTCTGGG...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGGGGAAGGCAAGTGCCTaGTCAGTGTGGTTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVGKASA*SVWFWR
Trigger: ACGCCAAAACCACACTGACCAGGCACTTGCCTTCCC...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGGCCAGCAGTCACATGTaGCCGGTGCCTACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQASSHM*PVPTAV
Trigger: CACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTTCTGAGGGAATCCTCTaGAAGAGCCATCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRSEGIL*KSHHLP
Trigger: GGGAAGGTGATGGCTCTTCCAGAGGATTCCCTCAGA...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCCAGATATGTGCAAGGTaGAGGCCAAGCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRAQICAR*RPSTTA
Trigger: AGCTGTGGTGCTTGGCCTCCACCTTGCACATATCTG...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAGAACCTTCCAGGCCTaGTGCAGTCTGAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCRTFQA*CSLRAQ
Trigger: CTGTGCTCTCAGACTGCACCAGGCCTGGAAGGTTCT...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGTCTGGCAGAGTGGTATaGGCACCCCACCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVSGRVV*APHPWA
Trigger: AGCCCAGGGGTGGGGTGCCCATACCACTCTGCCAGA...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTCAGGGCTTTGGAGGTTaGGAACACCCCTATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LSRTAGHTHSQVPTGGEGQGFGG*EHPYAH
Trigger: GTGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCTG...ACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCAGCAGGGGATGGGCATaGGACGTCCTGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSSRGWA*DVLTPV
Trigger: AACTGGGGTCAGGACGTCCCATGCCCATCCCCTGCT...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCAGCAGGAGCAGGGGATaGGCATGGGACGTCCTGACC +
Preference number: 4 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFSRSRG*AWDVLT
Trigger: GGTCAGGACGTCCCATGCCCATCCCCTGCTCCTGCT...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGGGTGTACCCTAAAGTaGGTGGGGCTGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLGCTLK*VGLPRR
Trigger: TCTCCTGGGCAGCCCCACCCACTTTAGGGTACACCC...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCATCCTGCGCGAGCAAGTaGGGCGGGAGTCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: WGGCVHCHLSLCSLAGKASCASK*GGSQSG
Trigger: ACCAGACTGACTCCCGCCCCACTTGCTCGCGCAGGA...TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586869.5
CDS-3UTR TCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACCTGTGGCTGGTAGATaGTGTCTAGGACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCAPVAGR*CLGPSL
Trigger: CAGAGAAGGTCCTAGACATCATCTACCAGCCACAGG...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGATGACTGCCTCACTGTaGCCCTCCAAGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLMTASL*PSKELV
Trigger: CACCAGCTCCTTGGAGGGTCACAGTGAGGCAGTCAT...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAACTGGGTGTGCCCGGTaGGGATGCGCTCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQTGCAR*GCAHSG
Trigger: GCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGT...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGGAGCTCTCCAGACTTTaGTGGTGCGGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRELSRL*WCGPGR
Trigger: CCTCCCAGGACCGCACCATCAAAGTCTGGAGAGCTC...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGCACAGCACACCGTCATaGGCTCTCCAGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGHSTPS*ALQTLM
Trigger: CATCAAAGTCTGGAGAGCTCATGACGGTGTGCTGTG...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp GTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGGTCTTGGGGATTAACTaGGGCCTCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VTDWVCPVRMRSQRPAVVVLGIN*GLSRFK
Trigger: TTTGAACCTGCTGAGGCCTCAGTTAATCCCCAAGAC...CACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCACCACAGGAATAAGGTaGAGTCGTCGGAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCTTGIR*SRRSQT
Trigger: TGTCTGGCTCCGACGACTTCACCTTATTCCTGTGGT...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGACCACAGGAATAAGGTaGAGTCGTCGGAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPETTGIR*SRRSQT
Trigger: TGTCTGGCTCCGACGACTTCACCTTATTCCTGTGGT...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAACCACAGGAATAAGGTaGAGTCGTCGGAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCATTGIR*SRRSQT
Trigger: TGTCTGGCTCCGACGACTTCACCTTATTCCTGTGGT...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATGCCATCCCACAGCTTaGTGGACTTGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPCHPTA*WTCQRR
Trigger: CCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCA...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGAGCCGACTGTCAGCTaGCCACGCAATCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLEPTVS*PRNLVH
Trigger: GTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTC...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp ACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCTTGCATGTaGAATGTGGTGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGDRLGVPGEDALTAACSCVPCM*NVVSLC
Trigger: GCACAGAGACACCACATTTCACATGCAAGGGACACA...ACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGTCGGTCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR TCA 90 bp GGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACTGTGTCCCTTGCATGTaGAATGTGGTGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GPWCSPSGRGLAESGTAHCVPCM*NVVSLC
Trigger: GCACAGAGACACCACATTTCACATGCAAGGGACACA...GTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGACCCCTATGCCCACATaGCTCATCTGGCTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPETPMPT*LIWLAF
Trigger: GAAAGCTAGCCAGATGAGTCATGTGGGCATAGGGGT...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCGCAAGCCCTACAAAGTaGGCCCTGGGAAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGASPTK*ALGKEG
Trigger: CCCCTCTTTTCCCAGGGCTCACTTTGTAGGGCTTGC...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGAGGACAGGACATATCTaGGGAAGCCTCGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAERTGHI*GSLGAL
Trigger: GAGAGCCCCGAGGCTTCCTCAGATATGTCCTGTCCT...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTGCGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GREGRQVPGQCGFGVVQCALHTS*SLSGVM
Trigger: CATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGC...GCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGAGGGTCCTGCCCACCTaGTTCCCTGTGCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CFPVLGSQRRIWPFLQPERVLPT*FPVLGS
Trigger: GGACCCAAGCACAGGGAAGCAGGTGGGCAGGACCCT...CTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAECHPWS*WPHSGT
Trigger: AGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCA...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGGTTCAAAGGCCCCAGTaGGCAGGGCATAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAEVQRPQ*AGHSQC
Trigger: GCACTGACTATGCCCTGCGCACTGGGGCCTTTGAAC...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp ATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGTTCAAAGGCCCCAGTaGGCAGGGCATAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MRSQRPAVVSQIRTLPSLVQRPQ*AGHSQC
Trigger: GCACTGACTATGCCCTGCGCACTGGGGCCTTTGAAC...CAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCGTCCTTCCCACCACTTaGCACTCTCTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSVLPTT*HSLAIW
Trigger: CCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGAC...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGTCCTTCCCACCACTTaGCACTCTCTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTVLPTT*HSLAIW
Trigger: CCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGAC...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGGGCVH*HLSLCS
Trigger: AGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCCACAGGAGAATGAGTTaGCCGAGGCAAAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRAHRRMS*PRQRIV
Trigger: GACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCGGGTTCCACACTCAGTaGTGCAGTACCTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCGFHTQ*CSTLHL
Trigger: AAGGTGCAAGGTACTGCAGCACTGAGTGTGGAACCC...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTTGCCCGCCCTCATCCTaGAACTGCACTAGCAACCGC +
Preference number: 4 (lower is better)
Translates to: GGCVHCHLSLCSLAGKAACPPSS*NCTSNR
Trigger: GCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCA...AGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGTGCCCGCCCTCATCCTaGAACTGCACTAGCAACCGC +
Preference number: 4 (lower is better)
Translates to: PTCFPVLGSQRRIWPFLQCPPSS*NCTSNR
Trigger: GCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCA...CTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GVCTAISAFVLWQGRQLARQVTD*VCPVRM
Trigger: CATCCTCACCGGGCACACCCAGTCGGTCACCTGTCT...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGGCCAGCTTCCTGAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LGSQRRIWPFLQPEASFLRQVTD*VCPVRM
Trigger: CATCCTCACCGGGCACACCCAGTCGGTCACCTGTCT...CAGGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GCCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: AHLLPCAWVPEENLAILARQVTD*VCPVRM
Trigger: CATCCTCACCGGGCACACCCAGTCGGTCACCTGTCT...TGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGAGCCTCTCTGGACCCTaGCCCCGCACGAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGSLSGP*PRTRLY
Trigger: ATACAACCTCGTGCGGGGCCAGGGTCCAGAGAGGCT...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGTACACGGCAGCCACGTaGCCGCGTAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEYTAAT*PRREAR
Trigger: CCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTA...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGTACACGGCAGCCACGTaGCCGCGTAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLYTAAT*PRREAR
Trigger: CCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTA...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCTCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GCPPPLSVPARYRVADTGSAFVL*QGRQLA
Trigger: TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGA...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTTCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCSAFVL*QGRQLA
Trigger: TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGA...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTTTCTCAGGTCCCCACTaGTGGGGAGGGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGFSGPH*WGGCVH
Trigger: GTGCACACACCCTCCCCACCAGTGGGGACCTGAGAA...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATTCCCAGAGGAGAATCTaGCCATTCTTGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGVPGEDALTAACSCVPDSQRRI*PFLQPE
Trigger: CTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGA...ATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATGCAAGGGCGGGGGCTaGACAATCTCATTTAGCACA +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPCKGGG*TISFST
Trigger: TGTGCTAAATGAGATTGTCCAGCCCCCGCCCTTGCA...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCGGGAAGGCAAGTGCCTaGTCAGTGTGGTTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRAGKASA*SVWFWR
Trigger: ACGCCAAAACCACACTGACCAGGCACTTGCCTTCCC...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCCCAGGGCAGTGCTTaGTGCCTGGCAGGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPEAQGSA*CLAGPQ
Trigger: TTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGGGCAAGATCTCGGCCTaGGGTCTGAGTCCTGATGGG +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRGKISA*GLSPDG
Trigger: CCCATCAGGACTCAGACCCCAGGCCGAGATCTTGCC...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAGATATGTGCAAGGTaGAGGCCAAGCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCQICAR*RPSTTA
Trigger: AGCTGTGGTGCTTGGCCTCCACCTTGCACATATCTG...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTTTCAGTTTGCAACCCTaGCCACTGACTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRFSLQP*PLTSAA
Trigger: AGCTGCTGAAGTCAGTGGCCAGGGTTGCAAACTGAA...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTAGAGGCAGAGCTCAGGTaGTACCCTGAGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALEAELR*YPEPWG
Trigger: TCCCCACGGCTCAGGGTACCACCTGAGCTCTGCCTC...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTCCTGTGGCTGGTAGATaGTGTCTAGGACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSRTAGHTHSQVPTGGEGPVAGR*CLGPSL
Trigger: CAGAGAAGGTCCTAGACATCATCTACCAGCCACAGG...ACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGCCCAGCTCAGGCCTGTaGTCCACTTGCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLPSSGL*STCCGQ
Trigger: CTGGCCACAGCAAGTGGATCACAGGCCTGAGCTGGG...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATGGGCATAGTCAGTGCTaGGGGCCATGGTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHGHSQC*GPWCSP
Trigger: GGGTGAACACCATGGCCCTCAGCACTGACTATGCCC...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCGTCTTGGGGATTAACTaGGGCCTCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCVLGIN*GLSRFK
Trigger: TTTGAACCTGCTGAGGCCTCAGTTAATCCCCAAGAC...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTCACTGCTGCCGCTaGCCAGGAGCCGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: HGPSSVTTSCDLRFLALGCHCCR*PGADCQ
Trigger: CTGACAGTCGGCTCCTGGTCAGCGGCAGCAGTGACA...CCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTACGGGCCAAGTTCAGTaGCAACTTCCTGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCTGQVQ*QLPVTF
Trigger: GAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGT...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATGTGTCCCTTGCATGTaGAATGTGGTGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPCVPCM*NVVSLC
Trigger: GCACAGAGACACCACATTTCACATGCAAGGGACACA...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTAGCCATTCTTGCAGCCTaGGGCCAGCTTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALAILAA*GQLPAI
Trigger: GATGGCAGGAAGCTGGCCTCAGGCTGCAAGAATGGC...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGTCTCGGCCTGGGGTCTaGGTCCTGATGGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: VCTAISAFVLWQGRQLAESRPGV*VLMGIP
Trigger: AGGAATTCCCATCAGGACTCAGACCCCAGGCCGAGA...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGAGGCCTGGTGCAGTCTaGGAGCACAGCAGACAAACA +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAERPGAV*EHSRQT
Trigger: TGTTTGTCTGCTGTGCTCTCAGACTGCACCAGGCCT...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGTGCACTCGAGCCACTTaGACACCAGGTGACAGAGTG +
Preference number: 4 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQCTRAT*TPGDRV
Trigger: CACTCTGTCACCTGGTGTTCAAGTGGCTCGAGTGCA...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS-3UTR GCA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCACCTCCAAGGAGCTGGTaGAGCGAGTCACAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: QEVAKTQENELPEAKNRPPPRSW*SESQPG
Trigger: TCCGGGCTGTGACTCGCTGCACCAGCTCCTTGGAGG...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CAGTGTCTGTGTCCCTTGCATGTGAAATGTGGTGTCTCTGTGCTGAGATCCCAGGGCCAGCGAGGGTCCTaGCCACCTGCTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: QCLCPLHVKCGVSVLRSQGQRGS*PPASLC
Trigger: GCACAGGGAAGCAGGTGGGCAGGACCCTCGCTGGCC...CTGGGATCTCAGCACAGAGACACCACATTTCACATGCAAGGGACACAGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVCHPWS*WPHSGT
Trigger: AGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCA...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAATGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKCHPWS*WPHSGT
Trigger: AGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCA...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGGCCAGCTTCCTGTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: LGSQRRIWPFLQPEASFLCHPWS*WPHSGT
Trigger: AGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCA...CAGGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEVTDWV*PVRMRS
Trigger: TGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGTGACCGACTGGGTGTaGCCGGTGAGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPEVTDWV*PVRMRS
Trigger: TGAGCGCATCCTCACCGGGCACACCCAGTCGGTCAC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGGTTCAAAGGCCCCAGTaGGCAGGGCATAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRVQRPQ*AGHSQC
Trigger: GCACTGACTATGCCCTGCGCACTGGGGCCTTTGAAC...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp GGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGTTCAAAGGCCCCAGTaGGCAGGGCATAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGCVHCHLSLCSLAGKAAVQRPQ*AGHSQC
Trigger: GCACTGACTATGCCCTGCGCACTGGGGCCTTTGAAC...AGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCGTCCTTCCCACCACTTaGCACTCTCTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFVLPTT*HSLAIW
Trigger: CCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGAC...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTGAATCTGGCCATTCTTaGAGCCTGAGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LTAACSCVPDPHTAILGAESGHS*SLRPAS
Trigger: GGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTC...AGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTCACATGTGGCCGGTaGCTACTGCAGTGGACAACA +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLVTCGR*LLQWTT
Trigger: TGTTGTCCACTGCAGTAGGCACCGGCCACATGTGAC...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCCCCTCATTAAAGAACTaGAGGTCATCCAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRAPSLKN*RSSSTL
Trigger: TAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGG...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCCAGGCTCAGCCACTaGCCACAGCTGCTAGACTCC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPEARLSH*PQLLDS
Trigger: GGAGTCTAGCAGCTGTGGGCAGTGGCTGAGCCTGGC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGTGAAAGTCATCTTTaGCCGTCCTGCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGSESHL*PSCHPT
Trigger: TGTGGGATGGCAGGACGGGCAAAGATGACTTTCACT...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS-3UTR CCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGGACAAAGAAAGCCAGTaGCAGGGGATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRDKESQ*QGILLG
Trigger: GCCCAGGAGGATCCCCTGCCACTGGCTTTCTTTGTC...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGAGGGACAAAGAAAGCCAGTaGCAGGGGATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASLCLGPRGESGHSCSLRDKESQ*QGILLG
Trigger: GCCCAGGAGGATCCCCTGCCACTGGCTTTCTTTGTC...CCTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGACCCTCCAAGGAGCTaGTGCAGCGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPEDPPRS*CSESQP
Trigger: GGGCTGTGACTCGCTGCACCAGCTCCTTGGAGGGTC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCACCCAGAGGAGAATGGTaGTGTCTCCAGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: WGGCVHCHLSLCSLAGKAPRGEW*CLQSHW
Trigger: CCAGTGGCTCTGGAGACACCACCATTCTCCTCTGGG...TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360831.9
CDS-3UTR CCA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATTCACCCAGTGGCCGTaGCCTTGCAGAGTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: QEVAKTQENELPEAKNRPFTQWP*PCRVRH
Trigger: GTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAA...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTATGGTGTTCACCCAGTaGCCGTGGCCTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGMVFTQ*PWPCRV
Trigger: GACTCTGCAAGGCCACGGCCACTGGGTGAACACCAT...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGATGGTGTTCACCCAGTaGCCGTGGCCTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRMVFTQ*PWPCRV
Trigger: GACTCTGCAAGGCCACGGCCACTGGGTGAACACCAT...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGGATCCTTGGAGGTCTTaGGGATTAACTGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVDPWRS*GLTEAS
Trigger: TGAGGCCTCAGTTAATCCCCAAGACCTCCAAGGATC...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTTCCTGCAAGGATCCTTaGAGGTCTTGGGGATTAACT +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRSCKDP*RSWGLT
Trigger: AGTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGA...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGCCACTTGCCACTCTCTaGCCATCTGGACTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLPLATL*PSGLQS
Trigger: TGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGG...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCATCAGGTCCCCACTGGTaGGGAGGGTGTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSSGPHW*GGCVHC
Trigger: GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGA...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCTTCTCAGGTCCCCACTaGTGGGGAGGGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPFSGPH*WGGCVH
Trigger: GTGCACACACCCTCCCCACCAGTGGGGACCTGAGAA...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCAGTGCCTGGTCAGTGTaGTTTTGGCGTAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRASAWSV*FWRSPV
Trigger: CACTGGACTACGCCAAAACCACACTGACCAGGCACT...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGGCCACTATCACAACTaGCCTCTCTCTTACCAACAC +
Preference number: 4 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPEGHYHN*PLSYQH
Trigger: GTGTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCC...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTCACCAAGGAGCTCAGTaGCTGATAGTTTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RQLAEAESRWGSERTSGRHQGAQ*LIVLFA
Trigger: AGCGAACAAAACTATCAGCCACTGAGCTCCTTGGTG...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCAGCAGACAAACAGCTaGCACCAAGGAGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQQQTNS*HQGAQW
Trigger: CCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTG...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCATGGACAGACGTGGTaGCCCATGAACTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVHGQTW*PMNCQT
Trigger: AGTTTGACAGTTCATGGGCCACCACGTCTGTCCATG...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCGGGGAACAGGGAGACTaGTGCTCTAAGACTAAAAGG +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCGEQGD*CSKTKR
Trigger: CCTTTTAGTCTTAGAGCACCAGTCTCCCTGTTCCCC...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGGCAGACAGCCTCAGATaGGCTGGCTGGCACCCACCT +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLADSLR*AGWHPP
Trigger: AGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGC...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTCTCCTCCTCCAAATCTaGGCTGGGTCTAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGLLLQI*AGSRSL
Trigger: GAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAG...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAAGCCAGGTTCAGATCTaGGAAGGAACTCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPSQVQI*EGTLKG
Trigger: ACCCTTCAGAGTTCCTTCCCAGATCTGAACCTGGCT...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCATGCAGCCAACACAGCTaGGGTGGGGAAGTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPCSQHS*GGEVVQ
Trigger: TTGCACCACTTCCCCACCCCAGCTGTGTTGGCTGCA...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCATGACTGCCTCACTGTaGCCCTCCAAGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPMTASL*PSKELV
Trigger: CACCAGCTCCTTGGAGGGTCACAGTGAGGCAGTCAT...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGTCCTGTCATCCGAGTaGGAGGCTTTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTVLSSE*EAFCPL
Trigger: CAGAGGACAAAAAGCCTCTCACTCGGATGACAGGAC...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCGAGCCGACTGTCAGCTaGCCACGCAATCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPEPTVS*PRNLVH
Trigger: GTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTC...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCACGGGCCAAGTTCAGTaGCAACTTCCTGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEATGQVQ*QLPVTF
Trigger: GAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGT...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCAGCACAGTCCTTGATTaGGTCATGGGGATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCSTVLD*VMGILG
Trigger: TCCTAGAATCCCCATGACTCAATCAAGGACTGTGCT...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAAAAGTTTTGGAGCTTaGGAACCTTCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PVYRGQQATRILRSPLVGKSFGA*EPSRPG
Trigger: ACCAGGCCTGGAAGGTTCTCAAGCTCCAAAACTTTT...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGGAGGAGGTACAGGCTTaGGTCATGCATCTTTGCACC +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAEEEVQA*VMHLCT
Trigger: GGTGCAAAGATGCATGACTCAAGCCTGTACCTCCTC...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGGGTCCCATTTGGGGGTaGTGGGAGACAATGACAGAT +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAEGPIWG*WETMTD
Trigger: ATCTGTCATTGTCTCCCATCACCCCCAAATGGGACC...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCCTCATCCTGGAACTaGACTAGCAACCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRPSSWN*TSNRCT
Trigger: TGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGG...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GCCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCACCCTCATCCTGGAACTaGACTAGCAACCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: AHLLPCAWVPEENLAILAPSSWN*TSNRCT
Trigger: TGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGG...TGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCACCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSPRSAH*HPWSCW
Trigger: CCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGG...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLGGCVH*HLSLCS
Trigger: AGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp GCCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGAATCTGGCCATTCTTaGAGCCTGAGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AHLLPCAWVPEENLAILAESGHS*SLRPAS
Trigger: GGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTC...TGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR GCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCAGTGCGATGGAGGAACTaGACTTCTATTTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPVRWRN*TSISCQ
Trigger: CTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCAC...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACCTCACTGCAGATATGTaGAAGGTGGAGGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHLTADM*KVEAKH
Trigger: GTGCTTGGCCTCCACCTTGCACATATCTGCAGTGAG...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGGAACAGGGAGACTGGTaGTCTAAGACTAAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMEQGDW*SKTKRL
Trigger: GAGCCTTTTAGTCTTAGAGCACCAGTCTCCCTGTTC...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCAAGTCTGCTTTATGCTaGAGACAGCCTCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: GCPPPLSVPARYRVADTGKSALC*RQPQMG
Trigger: GCCCATCTGAGGCTGTCTGCAGCATAAAGCAGACTT...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGTTGGGAACACCCCTATaGCCACATGACTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQLGTPL*PHDSSG
Trigger: GCCAGATGAGTCATGTGGGCATAGGGGTGTTCCCAA...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTGGGGTGGGGAAGTGGTaGAAGCCCTACAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSGVGKW*KPYKVS
Trigger: GCTCACTTTGTAGGGCTTGCACCACTTCCCCACCCC...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACAGTGCTGCAGTACCTTaGACCTTCCATCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHSAAVP*TFHLTC
Trigger: GCAGGTCAGATGGAAGGTGCAAGGTACTGCAGCACT...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAACAGGAGAGTAGTACATaGTTCGGGGCAGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKQESST*FGAGVP
Trigger: TGGAACCCCTGCCCCGAAGCATGTACTACTCTCCTG...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGAATGAGCCAAGATCGTaGCGCTGCACTCGAGCCACT +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRNEPRS*RCTRAT
Trigger: AGTGGCTCGAGTGCAGCGGCACGATCTTGGCTCATT...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS-3UTR CCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCGACAAAGAAAGCCAGTaGCAGGGGATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPDKESQ*QGILLG
Trigger: GCCCAGGAGGATCCCCTGCCACTGGCTTTCTTTGTC...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTGCTCTGTCTCCACTGCCTaGGACTCCAACGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GREGRQVPGQCGFGVVQCSVSTA*DSNVFP
Trigger: GGGGAAGACGTTGGAGTCCCAGGCAGTGGAGACAGA...GCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGC +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPAHCHP*SCWPHS
Trigger: GCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGC...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGGCTGACCACGCAATCTaGTACACGGCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: HGPSSVTTSCDLRFLALGADHAI*YTAATW
Trigger: CCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGC...CCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGCTGACCACGCAATCTaGTACACGGCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSADHAI*YTAATW
Trigger: CCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGC...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAATATACCTCATCCGCGTaGCCGGGCAGGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQYTSSA*PGRSMA
Trigger: GGCCATGGACCTGCCCGGCCACGCGGATGAGGTATA...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTCCACTTGCCACTCTCTaGCCATCTGGACTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGPLATL*PSGLQS
Trigger: TGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGG...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAACCACTTGCCACTCTCTaGCCATCTGGACTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKPLATL*PSGLQS
Trigger: TGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGG...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAATCAGCCTTTGTTCTCTaGCAGGGAAGGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKSAFVL*QGRQLA
Trigger: TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGA...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCATTCTCAGGTCCCCACTaGTGGGGAGGGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSFSGPH*WGGCVH
Trigger: GTGCACACACCCTCCCCACCAGTGGGGACCTGAGAA...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCCTTGCATGTGAAATGTaGTGTCTCTGTGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: PSGRGLAESGTAHRHELSLACEM*CLCAEI
Trigger: GATCTCAGCACAGAGACACCACATTTCACATGCAAG...GGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp GCCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCGCATGGAGGGGCAGCTTCCTGCCATCTaGAGACCAGGATATACTAAG +
Preference number: 4 (lower is better)
Translates to: AILGAAGHIAALRVRMEGQLPAI*RPGYTK
Trigger: CTTAGTATATCCTGGTCTCCAGATGGCAGGAAGCTG...CCCCTCCATGCGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp CTGGGTGTGCCCGGTGAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCAGCTTCCTGCCATCTaGAGACCAGGATATACTAAG +
Preference number: 4 (lower is better)
Translates to: LGVPGEDALTAACSCVPDQLPAI*RPGYTK
Trigger: CTTAGTATATCCTGGTCTCCAGATGGCAGGAAGCTG...ATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTCACCGGGCACACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCCTTACCCAGTGCGATaGAGGAACTGCACTTCTATT +
Preference number: 4 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVPYPVR*RNCTSI
Trigger: AATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGG...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCGTGCACAATAAGCTTTaGGGCAGGGCCTGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCVHNKL*GRAWFN
Trigger: ATTAAACCAGGCCCTGCCCCAAAGCTTATTGTGCAC...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTTGTCATGGACAGACGTaGTGGCCCATGAACTGTCAA +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCCHGQT*WPMNCQ
Trigger: TTGACAGTTCATGGGCCACCACGTCTGTCCATGACA...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCAGGAGATGCGGAGGCTaGAGGATCTGGAATACCTAT +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRARRCGG*RIWNTY
Trigger: ATAGGTATTCCAGATCCTCCAGCCTCCGCATCTCCT...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTAGGAACAGCCTGGGTATaGGGTAGGGGTATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALGTAWV*GRGMGV
Trigger: TACCCCCATACCCCTACCCCATACCCAGGCTGTTCC...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTACAGGGCTTTGGAGGTTaGGAACACCCCTATGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALQGFGG*EHPYAH
Trigger: GTGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCTG...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCACCTGGACCTACGCCTTaGGCAAGCAGCCGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: QEVAKTQENELPEAKNRPPGPTP*ASSRSV
Trigger: AACTGACCGGCTGCTTGCCCAAGGCGTAGGTCCAGG...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCACCTGGACCTACGCCTTaGGCAAGCAGCCGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSPGPTP*ASSRSV
Trigger: AACTGACCGGCTGCTTGCCCAAGGCGTAGGTCCAGG...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGGGGTGTACCCTAAAGTaGGTGGGGCTGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HGPSSVTTSCDLRFLALGGCTLK*VGLPRR
Trigger: TCTCCTGGGCAGCCCCACCCACTTTAGGGTACACCC...CCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGAGGCAGAGCTCAGGTaGTACCCTGAGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQEAELR*YPEPWG
Trigger: TCCCCACGGCTCAGGGTACCACCTGAGCTCTGCCTC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAACCTGTGGCTGGTAGATaGTGTCTAGGACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKPVAGR*CLGPSL
Trigger: CAGAGAAGGTCCTAGACATCATCTACCAGCCACAGG...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGCCTGTGGCTGGTAGATaGTGTCTAGGACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTCFPVLGSQRRIWPFLQPVAGR*CLGPSL
Trigger: CAGAGAAGGTCCTAGACATCATCTACCAGCCACAGG...CTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGCACAGCACACCGTCATaGGCTCTCCAGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVHSTPS*ALQTLM
Trigger: CATCAAAGTCTGGAGAGCTCATGACGGTGTGCTGTG...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAACCACAGGAATAAGGTaGAGTCGTCGGAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPTTGIR*SRRSQT
Trigger: TGTCTGGCTCCGACGACTTCACCTTATTCCTGTGGT...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAAGTCCTGTCATCCGAGTaGGAGGCTTTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKVLSSE*EAFCPL
Trigger: CAGAGGACAAAAAGCCTCTCACTCGGATGACAGGAC...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGTCCTGTCATCCGAGTaGGAGGCTTTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GVCTAISAFVLWQGRQLAVLSSE*EAFCPL
Trigger: CAGAGGACAAAAAGCCTCTCACTCGGATGACAGGAC...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTTGCCATCCCACAGCTTaGTGGACTTGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGCHPTA*WTCQRR
Trigger: CCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCA...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGGAGCCGACTGTCAGCTaGCCACGCAATCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLEPTVS*PRNLVH
Trigger: GTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTC...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTATAGAACCTGGGATCTaGCCCTGTACAGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTIEPGI*PCTELT
Trigger: TGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTAT...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCATTCCTTTCACTGCTTaGAAGTTCTCGTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRAIPFTA*KFSWQR
Trigger: TCTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAAT...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGTCTCGGCCTGGGGTCTaGGTCCTGATGGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: RTWDLTLYRADTRGPLIESRPGV*VLMGIP
Trigger: AGGAATTCCCATCAGGACTCAGACCCCAGGCCGAGA...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCAAAAGTTTTGGAGCTTaGGAACCTTCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GCPPPLSVPARYRVADTGKSFGA*EPSRPG
Trigger: ACCAGGCCTGGAAGGTTCTCAAGCTCCAAAACTTTT...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAACCCCTATGCCCACATaGCTCATCTGGCTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GVCTAISAFVLWQGRQLATPMPT*LIWLAF
Trigger: GAAAGCTAGCCAGATGAGTCATGTGGGCATAGGGGT...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCAAGACACAGGAGAATaGGTTGCCCGAGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQQDTGE*VARGKE
Trigger: TTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTG...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCCCTCATCCTGGAACTaGACTAGCAACCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPPSSWN*TSNRCT
Trigger: TGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGG...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGGGAAGCCAGGTACTTaGCCGTCCTGCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQGKPGT*PSCHPT
Trigger: TGTGGGATGGCAGGACGGGCAAGTACCTGGCTTCCC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: WGGCVHCHLSLCSLAGKAGGCVH*HLSLCS
Trigger: AGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC...TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR GCA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTCTGGCTCTGGGGTGTaGCACAGGCGGGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSSGSGV*HRRGSV
Trigger: CACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGA...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCGAATCTGGCCATTCTTaGAGCCTGAGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPESGHS*SLRPAS
Trigger: GGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTC...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTGTGGCCGGTGCCTACTaGAGTGGACAACAATACAGC +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSVAGAY*SGQQYS
Trigger: GCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCAC...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTGTCACATGTGGCCGGTaGCTACTGCAGTGGACAACA +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSVTCGR*LLQWTT
Trigger: TGTTGTCCACTGCAGTAGGCACCGGCCACATGTGAC...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCTGCACTTCTATTTCATaGCAGCAGTCACATGTGGCC +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRACTSIS*QQSHVA
Trigger: GGCCACATGTGACTGCTGGCATGAAATAGAAGTGCA...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGGGGCCTCAAGCAGTGTaGTATGCGAAGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLGPQAV*YAKAEA
Trigger: TGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCC...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCGAACAGGGAGACTGGTaGTCTAAGACTAAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GCPPPLSVPARYRVADTGEQGDW*SKTKRL
Trigger: GAGCCTTTTAGTCTTAGAGCACCAGTCTCCCTGTTC...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTAAAGTCTGCTTTATaGTGCAGACAGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GQQATRILRSPLVGRVCALKSAL*CRQPQM
Trigger: CATCTGAGGCTGTCTGCAGCATAAAGCAGACTTTAG...TGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGTTGGGAACACCCCTATaGCCACATGACTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVLGTPL*PHDSSG
Trigger: GCCAGATGAGTCATGTGGGCATAGGGGTGTTCCCAA...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGGGGTGGGGAAGTGGTaGAAGCCCTACAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPEGVGKW*KPYKVS
Trigger: GCTCACTTTGTAGGGCTTGCACCACTTCCCCACCCC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTCACAGGAGAATGAGTTaGCCGAGGCAAAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTHRRMS*PRQRIV
Trigger: GACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAAGTGCTGCAGTACCTTaGACCTTCCATCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPSAAVP*TFHLTC
Trigger: GCAGGTCAGATGGAAGGTGCAAGGTACTGCAGCACT...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGTTCCACACTCAGTaGTGCAGTACCTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGGFHTQ*CSTLHL
Trigger: AAGGTGCAAGGTACTGCAGCACTGAGTGTGGAACCC...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGACAAAGAAAGCCAGTaGCAGGGGATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPEDKESQ*QGILLG
Trigger: GCCCAGGAGGATCCCCTGCCACTGGCTTTCTTTGTC...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGC +
Preference number: 4 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEAHCHP*SCWPHS
Trigger: GCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGC...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCCTTGCATGTGAAATGTGGTGTCTCTGTGCTGAGATCCCAGAAGCGCACGGTGGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGC +
Preference number: 4 (lower is better)
Translates to: PLHVKCGVSVLRSQKRTVAHCHP*SCWPHS
Trigger: GCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGC...CACCGTGCGCTTCTGGGATCTCAGCACAGAGACACCACATTTCACATGCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACGATCCTTGGAGGTCTTaGGGATTAACTGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHDPWRS*GLTEAS
Trigger: TGAGGCCTCAGTTAATCCCCAAGACCTCCAAGGATC...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGTTGATGAGAGCTTaGTGTCCTGTCATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSWLMRA*CPVIRV
Trigger: CACTCGGATGACAGGACACCAAGCTCTCATCAACCA...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCGGAGAGAAGAGCACCTaGTTGATGAGAGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSGEKST*LMRAWC
Trigger: ACACCAAGCTCTCATCAACCAGGTGCTCTTCTCTCC...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATCCACTTGCCACTCTCTaGCCATCTGGACTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHPLATL*PSGLQS
Trigger: TGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGG...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTTCCCAGAGGAGAATCTaGCCATTCTTGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGSQRRI*PFLQPE
Trigger: CTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGA...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCATCCCAGAGGAGAATCTaGCCATTCTTGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AHLLPCAWVPEENLAILASQRRI*PFLQPE
Trigger: CTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGA...TGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGTGGTCAGTGTGGTTTTaGCGTAGTCCAGTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGWSVWF*RSPVQG
Trigger: CCCTTGCACTGGACTACGCCAAAACCACACTGACCA...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGCCCTAGATTCTCCTTaGCCACTATCACAACTGGCC +
Preference number: 4 (lower is better)
Translates to: GVCTAISAFVLWQGRQLAALDSP*PLSQLA
Trigger: GGCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGC...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTGCCCAGGGCAGTGCTTaGTGCCTGGCAGGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLAQGSA*CLAGPQ
Trigger: TTGAGGCCCTGCCAGGCACCAAGCACTGCCCTGGGC...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTCAGAGTCTACATGGGTaGGGAGATAGAAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: LSRTAGHTHSQVPTGGEGQSLHG*GDRKQA
Trigger: TGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTG...ACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGCTCCTCCTCCAAATCTaGGCTGGGTCTAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HGPSSVTTSCDLRFLALGLLLQI*AGSRSL
Trigger: GAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAG...CCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACAGGAGATGCGGAGGCTaGAGGATCTGGAATACCTAT +
Preference number: 4 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHRRCGG*RIWNTY
Trigger: ATAGGTATTCCAGATCCTCCAGCCTCCGCATCTCCT...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGCTGGGGTGGGGAAGTaGTGCAAGCCCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSAGVGK*CKPYKV
Trigger: CACTTTGTAGGGCTTGCACCACTTCCCCACCCCAGC...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCATGCAGCCAACACAGCTaGGGTGGGGAAGTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSCSQHS*GGEVVQ
Trigger: TTGCACCACTTCCCCACCCCAGCTGTGTTGGCTGCA...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 72 bp GAGAAGTCCAAAGCCAGGGAACCAGGGCTTTGGAGGTaGGGAACACCCCTATGCCCACATGACTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: EKSKAREPGLWR*GTPLCPHDSSG
Trigger: GCCAGATGAGTCATGTGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCTGGTTCCCTGGCTTTGGACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGGCAGCCTGTCCGGGGTaGTGTCCACGGGCACGTCGA +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMAACPG*CPRARR
Trigger: TCGACGTGCCCGTGGACATCACCCCGGACAGGCTGC...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCACAGCACACCGTCATaGGCTCTCCAGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSHSTPS*ALQTLM
Trigger: CATCAAAGTCTGGAGAGCTCATGACGGTGTGCTGTG...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATCACAGCACACCGTCATaGGCTCTCCAGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHHSTPS*ALQTLM
Trigger: CATCAAAGTCTGGAGAGCTCATGACGGTGTGCTGTG...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGTCTTGGGGATTAACTaGGGCCTCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGVLGIN*GLSRFK
Trigger: TTTGAACCTGCTGAGGCCTCAGTTAATCCCCAAGAC...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCTGCCATCCCACAGCTTaGTGGACTTGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPCHPTA*WTCQRR
Trigger: CCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCA...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTGCCATCCCACAGCTTaGTGGACTTGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHCHPTA*WTCQRR
Trigger: CCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCA...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCAGTGACAACTTCCTGTaGCCTTCGATTTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CTAISAFVLWQGRQLAEASDNFL*PSISGS
Trigger: AGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACT...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCAGTGACAACTTCCTGTaGCCTTCGATTTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSSDNFL*PSISGS
Trigger: AGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACT...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTTGTGTCCCTTGCATGTaGAATGTGGTGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGCVPCM*NVVSLC
Trigger: GCACAGAGACACCACATTTCACATGCAAGGGACACA...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCTTTGGAAATCCAATCTaGGTAGTTCAGACCATGACC +
Preference number: 4 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCFGNPI*VVQTMT
Trigger: GGTCATGGTCTGAACTACTCAGATTGGATTTCCAAA...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGAGCACCACAGCTAGGTaGCGCGCAAAACCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: HGPSSVTTSCDLRFLALGSTTAR*RAKPKS
Trigger: GCTTTTGGGTTTTGCGCGTCACCTAGCTGTGGTGCT...CCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAACAAGACACAGGAGAATaGGTTGCCCGAGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKQDTGE*VARGKE
Trigger: TTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTG...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCATAAGAAATATGGAATaGGGGTGTACCCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: EGSWQRPSRGGGQRELRAIRNME*GCTLKW
Trigger: CCACTTTAGGGTACACCCTCATTCCATATTTCTTAT...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAATGCCTCTGCTGATCTaGCAGGAGGCAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQMPLLI*QEAELR
Trigger: CCTGAGCTCTGCCTCCTGTCAGATCAGCAGAGGCAT...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGAGGGGAACCCAGCAGCTaGCCGCCCTCATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRGEPSS*PPSSWN
Trigger: GTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCC...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCCTCCAAGGAGCTGGTaGAGCGAGTCACAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFPPRSW*SESQPG
Trigger: TCCGGGCTGTGACTCGCTGCACCAGCTCCTTGGAGG...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGGAATCTGGCCATTCTTaGAGCCTGAGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEESGHS*SLRPAS
Trigger: GGAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTC...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGCACTTCTATTTCATaGCAGCAGTCACATGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSCTSIS*QQSHVA
Trigger: GGCCACATGTGACTGCTGGCATGAAATAGAAGTGCA...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCACAGCACCCTAAAGTCTaGTTTATGCTGCAGACAGCC +
Preference number: 4 (lower is better)
Translates to: WGGCVHCHLSLCSLAGKAQHPKV*FMLQTA
Trigger: GGCTGTCTGCAGCATAAAGCAGACTTTAGGGTGCTG...TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTACCTTCCATCTGACCTaGCTGGGCCCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLTFHLT*LGPSRS
Trigger: GCTCCTGCTGGGGCCCAGGCAGGTCAGATGGAAGGT...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCATTCCACACTCAGTGCTaGAGTACCTTGCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPFHTQC*STLHLP
Trigger: TGGAAGGTGCAAGGTACTGCAGCACTGAGTGTGGAA...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGTTCCACACTCAGTGCTaGAGTACCTTGCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVFHTQC*STLHLP
Trigger: TGGAAGGTGCAAGGTACTGCAGCACTGAGTGTGGAA...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGATCCTTGGAGGTCTTaGGGATTAACTGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VCTAISAFVLWQGRQLAEDPWRS*GLTEAS
Trigger: TGAGGCCTCAGTTAATCCCCAAGACCTCCAAGGATC...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp ACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGTCCTGCAAGGATCCTTaGAGGTCTTGGGGATTAACT +
Preference number: 4 (lower is better)
Translates to: TAISAFVLWQGRQLAEAESCKDP*RSWGLT
Trigger: AGTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGA...CTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTTGGTTGATGAGAGCTTaGTGTCCTGTCATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGWLMRA*CPVIRV
Trigger: CACTCGGATGACAGGACACCAAGCTCTCATCAACCA...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCGGAGAGAAGAGCACCTaGTTGATGAGAGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFGEKST*LMRAWC
Trigger: ACACCAAGCTCTCATCAACCAGGTGCTCTTCTCTCC...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATTTTGGTCATAGAACCTaGGATCTGACCCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: RPHAFSGPHWWGGCVHCHFGHRT*DLTLYR
Trigger: TCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAA...ATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCTTGCATGTGAAATGTaGTGTCTCTGTGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: ALRNQSHETYHTTSTLRALACEM*CLCAEI
Trigger: GATCTCAGCACAGAGACACCACATTTCACATGCAAG...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTCTTGCATGTGAAATGTaGTGTCTCTGTGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: GCAHSGLQLCPRSAHCHPLACEM*CLCAEI
Trigger: GATCTCAGCACAGAGACACCACATTTCACATGCAAG...AGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATAGTGCCTGGTCAGTGTaGTTTTGGCGTAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHSAWSV*FWRSPV
Trigger: CACTGGACTACGCCAAAACCACACTGACCAGGCACT...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGAGAACCTTCCAGGCCTaGTGCAGTCTGAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLRTFQA*CSLRAQ
Trigger: CTGTGCTCTCAGACTGCACCAGGCCTGGAAGGTTCT...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCCTCATCAAAAGTTTTaGAGCTTGAGAACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCPHQKF*SLRTFQ
Trigger: CTGGAAGGTTCTCAAGCTCCAAAACTTTTGATGAGG...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCACCTCATCAAAAGTTTTaGAGCTTGAGAACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QATRILRSPLVGRVCALPPHQKF*SLRTFQ
Trigger: CTGGAAGGTTCTCAAGCTCCAAAACTTTTGATGAGG...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCACATGGACAGACGTGGTaGCCCATGAACTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: WGGCVHCHLSLCSLAGKAHGQTW*PMNCQT
Trigger: AGTTTGACAGTTCATGGGCCACCACGTCTGTCCATG...TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCATGCGGGCCCGGGGTCTaGCAGAGTGGTATGGGCACC +
Preference number: 4 (lower is better)
Translates to: MSCPRQRIVHGSSTRFWACGPGV*QSGMGT
Trigger: GGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCA...TGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTAGCCAGGTTCAGATCTaGGAAGGAACTCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGSQVQI*EGTLKG
Trigger: ACCCTTCAGAGTTCCTTCCCAGATCTGAACCTGGCT...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGGAACAGCCTGGGTATaGGGTAGGGGTATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQGTAWV*GRGMGV
Trigger: TACCCCCATACCCCTACCCCATACCCAGGCTGTTCC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATAAGAAGGGAACAGCCTaGGTATGGGGTAGGGGTATG +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHKKGTA*VWGRGM
Trigger: CATACCCCTACCCCATACCCAGGCTGTTCCCTTCTT...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTAGCTTTCCTTCTGCCTaGGTCAAGAAGCATCAATTC +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCSFPSA*VKKHQF
Trigger: GAATTGATGCTTCTTGACCCAGGCAGAAGGAAAGCT...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAAGGGAACCAGGGCTTTaGAGGTTGGGAACACCCCTA +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSREPGL*RLGTPL
Trigger: TAGGGGTGTTCCCAACCTCCAAAGCCCTGGTTCCCT...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCACTACAAAGTGAGCCCTaGGAAAAGAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSLQSEP*EKRGLG
Trigger: CCCAAGGCCCCTCTTTTCCCAGGGCTCACTTTGTAG...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGCTGGGGTGGGGAAGTaGTGCAAGCCCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQAGVGK*CKPYKV
Trigger: CACTTTGTAGGGCTTGCACCACTTCCCCACCCCAGC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCAGCAGGGGATGGGCATaGGACGTCCTGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSSRGWA*DVLTPV
Trigger: AACTGGGGTCAGGACGTCCCATGCCCATCCCCTGCT...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGACTGGGTGTGCCCGGTaGGGATGCGCTCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: PWIFNKILGTTVKLMELKTGCAR*GCAHSG
Trigger: GCCGCTGTGAGCGCATCCTCACCGGGCACACCCAGT...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTGAGCTCTCCAGACTTTaGTGGTGCGGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVELSRL*WCGPGR
Trigger: CCTCCCAGGACCGCACCATCAAAGTCTGGAGAGCTC...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AAATGTGGTGTCTCTGTGCTGAGATCCCAGAAGCGCACGGTGGTGTCTCCAGAGCACAGCACACCGTCATaGGCTCTCCAGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: KCGVSVLRSQKRTVVSPEHSTPS*ALQTLM
Trigger: CATCAAAGTCTGGAGAGCTCATGACGGTGTGCTGTG...CTCTGGAGACACCACCGTGCGCTTCTGGGATCTCAGCACAGAGACACCACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR TCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTTTTGGAAATCCAATCTaGGTAGTTCAGACCATGACC +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCFGNPI*VVQTMT
Trigger: GGTCATGGTCTGAACTACTCAGATTGGATTTCCAAA...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTACTTCAGCAGCTTTCCTaGGAACTACCCCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALLQQLS*ELPHPD
Trigger: ATCTGGATGGGGTAGTTCTCAGGAAAGCTGCTGAAG...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGTGTCTGTGTCCCTTGCATGTGAAATGTGGTGTCTCTGTGCTGAGATCCCAGCAGGTACCCCCTCCATaGGTCTGCAGCTGTCCTTAC +
Preference number: 4 (lower is better)
Translates to: QCLCPLHVKCGVSVLRSQQVPPP*VCSCPY
Trigger: GTAAGGACAGCTGCAGACTCATGGAGGGGGTACCTG...CTGGGATCTCAGCACAGAGACACCACATTTCACATGCAAGGGACACAGACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR GCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMCTSNR*TSRATA
Trigger: GGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCA...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCGGGCCTCAAGCAGTGTaGTATGCGAAGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSGPQAV*YAKAEA
Trigger: TGCCTCTGCCTTCGCATAGCACACTGCTTGAGGCCC...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAACCTAACACGTGTTACTaGCTCAGTGTCCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQPNTCY*LSVRAA
Trigger: GGCTGCACGGACACTGAGGCAGTAACACGTGTTAGG...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGCTGAGCTTGTTTTCCTaGAACGAGAGGGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVLSLFS*NERVPF
Trigger: AAATGGGACCCTCTCGTTGCAGGAAAACAAGCTCAG...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTCTGTCTCCACTGCCTaGGACTCCAACGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSSVSTA*DSNVFP
Trigger: GGGGAAGACGTTGGAGTCCCAGGCAGTGGAGACAGA...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGAGTGATCCACTTGCTGTaGCCAGCGAGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRVIHLL*PARVLP
Trigger: GGGCAGGACCCTCGCTGGCCACAGCAAGTGGATCAC...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTAGACAGGTGACCGACTaGGTGTGCCCGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLRQVTD*VCPVRM
Trigger: CATCCTCACCGGGCACACCCAGTCGGTCACCTGTCT...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCTGGTTGATGAGAGCTTaGTGTCCTGTCATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPWLMRA*CPVIRV
Trigger: CACTCGGATGACAGGACACCAAGCTCTCATCAACCA...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATGGAGAGAAGAGCACCTaGTTGATGAGAGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHGEKST*LMRAWC
Trigger: ACACCAAGCTCTCATCAACCAGGTGCTCTTCTCTCC...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CCA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCCTTGCATGTGAAATGTaGTGTCTCTGTGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: GRVCALPSQPLFSGREGSLACEM*CLCAEI
Trigger: GATCTCAGCACAGAGACACCACATTTCACATGCAAG...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGTGGTCAGTGTGGTTTTaGCGTAGTCCAGTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEWSVWF*RSPVQG
Trigger: CCCTTGCACTGGACTACGCCAAAACCACACTGACCA...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGTGTGCTGTCCAATACTaGAGGCCTTACCCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPECAVQY*RPYPVR
Trigger: TCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACA...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGTCTGAGGGAATCCTCTaGAAGAGCCATCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPESEGIL*KSHHLP
Trigger: GGGAAGGTGATGGCTCTTCCAGAGGATTCCCTCAGA...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGTGTTTCCTGCGTCAATaGCTAGGTTGGATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGCFLRQ*LGWIRL
Trigger: CAGCCTTATCCAACCTAGCCATTGACGCAGGAAACA...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCAAAGAAGGGAACAGCCTaGGTATGGGGTAGGGGTATG +
Preference number: 4 (lower is better)
Translates to: QEVAKTQENELPEAKNRPKKGTA*VWGRGM
Trigger: CATACCCCTACCCCATACCCAGGCTGTTCCCTTCTT...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCGTCCTGACCCCAGTTaGGAGGGTGAAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFRPDPS*EGEGTG
Trigger: TCCTGTCCCTTCACCCTCCCAACTGGGGTCAGGACG...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 72 bp GGACAGACGTGGTGGCCCATGAACTGTCAAACTAGCTaGAGCTCTGGACGGAGGGATGTGGTACAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: GQTWWPMNCQTS*SSGRRDVVQSA
Trigger: TGCACTTTGTACCACATCCCTCCGTCCAGAGCTCAAGCTAGTTTGACAGTTCATGGGCCACCACGTCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTATGACTGCCTCACTGTaGCCCTCCAAGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVMTASL*PSKELV
Trigger: CACCAGCTCCTTGGAGGGTCACAGTGAGGCAGTCAT...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCCCAGCTCAGGCCTGTaGTCCACTTGCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMPSSGL*STCCGQ
Trigger: CTGGCCACAGCAAGTGGATCACAGGCCTGAGCTGGG...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGTCTTGGGGATTAACTaGGGCCTCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSVLGIN*GLSRFK
Trigger: TTTGAACCTGCTGAGGCCTCAGTTAATCCCCAAGAC...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR TCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTTGCTGCCTCCCCATCTaGGGGAATCCTCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVCCLPI*GNPLEE
Trigger: CTCTTCCAGAGGATTCCCTCAGATGGGGAGGCAGCA...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCACTTCAGCAGCTTTCCTaGGAACTACCCCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSLQQLS*ELPHPD
Trigger: ATCTGGATGGGGTAGTTCTCAGGAAAGCTGCTGAAG...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGCACTTGAACACCAGGTaGCAGAGTGAAAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: VCTAISAFVLWQGRQLAEHLNTR*QSESHL
Trigger: AAGATGACTTTCACTCTGTCACCTGGTGTTCAAGTG...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS-3UTR GCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTAACAATACCCACTTCTaGTCAGAGCTCATACTGCTG +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGNNTHF*SELILL
Trigger: CAGCAGTATGAGCTCTGAGCAGAAGTGGGTATTGTT...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAAACAATACCCACTTCTaGTCAGAGCTCATACTGCTG +
Preference number: 4 (lower is better)
Translates to: WGGCVHCHLSLCSLAGKANNTHF*SELILL
Trigger: CAGCAGTATGAGCTCTGAGCAGAAGTGGGTATTGTT...TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAAAGTCTGCTTTATGCTaGAGACAGCCTCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSKSALC*RQPQMG
Trigger: GCCCATCTGAGGCTGTCTGCAGCATAAAGCAGACTT...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTCTAAAGTCTGCTTTATaGTGCAGACAGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GGCVHCHLSLCSLAGKAALKSAL*CRQPQM
Trigger: CATCTGAGGCTGTCTGCAGCATAAAGCAGACTTTAG...AGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGTACAGGCTTGAGTCATaGATCTTTGCACCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRYRLES*IFAPVS
Trigger: GGAAACAGGTGCAAAGATGCATGACTCAAGCCTGTA...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTTGGTTTTTAGACTCTaGAATTCAGTGCCCATGATT +
Preference number: 4 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVLVFRL*NSVPMI
Trigger: AATCATGGGCACTGAATTGCAGAGTCTAAAAACCAA...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGACCTTCCATCTGACCTaGCTGGGCCCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMTFHLT*LGPSRS
Trigger: GCTCCTGCTGGGGCCCAGGCAGGTCAGATGGAAGGT...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTGGTCCCAGAGGAGAATaGTGGTGTCTCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFGPRGE*WCLQSH
Trigger: GTGGCTCTGGAGACACCACCATTCTCCTCTGGGACC...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360831.9
CDS-3UTR CCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGCACTCAGGGTTCGCATaGAGGGGCTCCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRHSGFA*RGSQLR
Trigger: CCTGAGCTGGGAGCCCCTCCATGCGAACCCTGAGTG...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGTTCACCCAGTGGCCGTaGCCTTGCAGAGTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMFTQWP*PCRVRH
Trigger: GTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAA...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTATCCTGCAAGGATCCTTaGAGGTCTTGGGGATTAACT +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALSCKDP*RSWGLT
Trigger: AGTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGA...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTAGCCTCTCTGGACCCTaGCCCCGCACGAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCSLSGP*PRTRLY
Trigger: ATACAACCTCGTGCGGGGCCAGGGTCCAGAGAGGCT...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGTACACGGCAGCCACGTaGCCGCGTAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PWIFNKILGTTVKLMELKYTAAT*PRREAR
Trigger: CCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTA...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCATTTGGTCATAGAACCTaGGATCTGACCCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: GVCTAISAFVLWQGRQLAFGHRT*DLTLYR
Trigger: TCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAA...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTGCCAGCTTCCTGCCATCTaGAGACCAGGATATACTAAG +
Preference number: 4 (lower is better)
Translates to: GREGRQVPGQCGFGVVQCQLPAI*RPGYTK
Trigger: CTTAGTATATCCTGGTCTCCAGATGGCAGGAAGCTG...GCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGCCCTAGATTCTCCTTaGCCACTATCACAACTGGCC +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQALDSP*PLSQLA
Trigger: GGCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCTTACCCAGTGCGATaGAGGAACTGCACTTCTATT +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSPYPVR*RNCTSI
Trigger: AATAGAAGTGCAGTTCCTCCATCGCACTGGGTAAGG...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCTGGACGGAGGGATGTaGTACAAAGTGCACAATAAG +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSLDGGM*YKVHNK
Trigger: CTTATTGTGCACTTTGTACCACATCCCTCCGTCCAG...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTTGTTTCCTGCGTCAATaGCTAGGTTGGATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSCFLRQ*LGWIRL
Trigger: CAGCCTTATCCAACCTAGCCATTGACGCAGGAAACA...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTCCCTTCCAAAGCCATTaGTTTTTAGACTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: IEDSRPHAFSGPHWWGGCPFQSH*FLDSAI
Trigger: AATTGCAGAGTCTAAAAACCAATGGCTTTGGAAGGG...ACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGAGGATTAAGCCACTCTaGGGCCCACTAGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPERIKPL*GPLGMQ
Trigger: TTGCATTCCTAGTGGGCCCCAGAGTGGCTTAATCCT...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAAGGATTAAGCCACTCTaGGGCCCACTAGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSRIKPL*GPLGMQ
Trigger: TTGCATTCCTAGTGGGCCCCAGAGTGGCTTAATCCT...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTGAGGGGCCTTGGGGGTaGAGAGAAGTCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCEGPWG*REVQSQ
Trigger: CTGGCTTTGGACTTCTCTCCACCCCCAAGGCCCCTC...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGAGGGTTGAGGACCCCTaGCGTATAAGAAATATGGAA +
Preference number: 4 (lower is better)
Translates to: IPVYRGQQATRILRSPLVRVEDP*RIRNME
Trigger: TTCCATATTTCTTATACGCCAGGGGTCCTCAACCCT...CACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGAGGGTTGAGGACCCCTaGCGTATAAGAAATATGGAA +
Preference number: 4 (lower is better)
Translates to: CALPSQPLFSGREGSWQRRVEDP*RIRNME
Trigger: TTCCATATTTCTTATACGCCAGGGGTCCTCAACCCT...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCAACGTCTTCCCCAGTaGGGAGACGATCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLQRLPQ*GDDLSI
Trigger: GATGCTGAGATCGTCTCCTCACTGGGGAAGACGTTG...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGGCATAGTCAGTGCTaGGGGCCATGGTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRGHSQC*GPWCSP
Trigger: GGGTGAACACCATGGCCCTCAGCACTGACTATGCCC...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGAGCACAGTCCTTGATTaGGTCATGGGGATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLSTVLD*VMGILG
Trigger: TCCTAGAATCCCCATGACTCAATCAAGGACTGTGCT...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTGCAAGCCCTACAAAGTaGGCCCTGGGAAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCASPTK*ALGKEG
Trigger: CCCCTCTTTTCCCAGGGCTCACTTTGTAGGGCTTGC...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMPRSAH*HPWSCW
Trigger: CCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGG...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTTCAAGCAGTGTGCTATaGGAAGGCAGAGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVSSSVL*EGRGIP
Trigger: GGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGA...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTTCAAGCAGTGTGCTATaGGAAGGCAGAGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLSSSVL*EGRGIP
Trigger: GGGGATGCCTCTGCCTTCGCATAGCACACTGCTTGA...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCGGGAATTCCTTTCACTaGTTGAAAGTTCTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPGNSFH*LKVLVA
Trigger: TGCCACGAGAACTTTCAAGCAGTGAAAGGAATTCCC...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTGGGAATTCCTTTCACTaGTTGAAAGTTCTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSGNSFH*LKVLVA
Trigger: TGCCACGAGAACTTTCAAGCAGTGAAAGGAATTCCC...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCGGATGTGGTACAAAGTaGACAATAAGCTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KTPFRSIEDSRPHAFSGPGCGTK*TISFGA
Trigger: TGCCCCAAAGCTTATTGTGCACTTTGTACCACATCC...GGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTGGATGTGGTACAAAGTaGACAATAAGCTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSGCGTK*TISFGA
Trigger: TGCCCCAAAGCTTATTGTGCACTTTGTACCACATCC...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAACAGCACCCTAAAGTCTaGTTTATGCTGCAGACAGCC +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQQHPKV*FMLQTA
Trigger: GGCTGTCTGCAGCATAAAGCAGACTTTAGGGTGCTG...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCACCCTCATTAAAGAACTaGAGGTCATCCAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: CGKTPFRSIEDSRPHAFSPSLKN*RSSSTL
Trigger: TAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGG...TGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTACAGGCTTGAGTCATaGATCTTTGCACCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHYRLES*IFAPVS
Trigger: GGAAACAGGTGCAAAGATGCATGACTCAAGCCTGTA...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGCTGAGCTTGTTTTCCTaGAACGAGAGGGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPELSLFS*NERVPF
Trigger: AAATGGGACCCTCTCGTTGCAGGAAAACAAGCTCAG...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGTGCCCGCCCTCATCCTaGAACTGCACTAGCAACCGC +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMCPPSS*NCTSNR
Trigger: GCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCA...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGCACCAAGGAGCTCAGTaGCTGATAGTTTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEHQGAQ*LIVLFA
Trigger: AGCGAACAAAACTATCAGCCACTGAGCTCCTTGGTG...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGGGGAACAGGGAGACTaGTGCTCTAAGACTAAAAGG +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQGEQGD*CSKTKR
Trigger: CCTTTTAGTCTTAGAGCACCAGTCTCCCTGTTCCCC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATCGTCAATGGCTAGGTTaGATAAGGCTGTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHRQWLG*IRLFKV
Trigger: GACCTTAAACAGCCTTATCCAACCTAGCCATTGACG...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGAGACAGCCCTTTGGTTaGAAATATCCCATAATGAGG +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGRQPFG*KYPIMR
Trigger: CCTCATTATGGGATATTTCCAACCAAAGGGCTGTCT...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTACAGACAGCCCTTTaGTTGGAAATATCCCATAAT +
Preference number: 4 (lower is better)
Translates to: PIPVYRGQQATRILRSPLVQTAL*LEISHN
Trigger: ATTATGGGATATTTCCAACCAAAGGGCTGTCTGTAC...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTAGGGAACCAGGGCTTTaGAGGTTGGGAACACCCCTA +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFREPGL*RLGTPL
Trigger: TAGGGGTGTTCCCAACCTCCAAAGCCCTGGTTCCCT...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGAGGGGCCTTGGGGGTaGAGAGAAGTCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTREGPWG*REVQSQ
Trigger: CTGGCTTTGGACTTCTCTCCACCCCCAAGGCCCCTC...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTACGGGCCAAGTTCAGTaGCAACTTCCTGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFTGQVQ*QLPVTF
Trigger: GAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGT...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGAAGGCCTGGTGCAGTCTaGGAGCACAGCAGACAAACA +
Preference number: 4 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRRPGAV*EHSRQT
Trigger: TGTTTGTCTGCTGTGCTCTCAGACTGCACCAGGCCT...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTGAGGAGGTACAGGCTTaGGTCATGCATCTTTGCACC +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFEEVQA*VMHLCT
Trigger: GGTGCAAAGATGCATGACTCAAGCCTGTACCTCCTC...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGATAAGAAATATGGAATaGGGGTGTACCCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: VTTSCDLRFLALGCATGGIRNME*GCTLKW
Trigger: CCACTTTAGGGTACACCCTCATTCCATATTTCTTAT...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTGGTCCCATTTGGGGGTaGTGGGAGACAATGACAGAT +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLGPIWG*WETMTD
Trigger: ATCTGTCATTGTCTCCCATCACCCCCAAATGGGACC...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGACCCTCATCCTGGAACTaGACTAGCAACCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRPSSWN*TSNRCT
Trigger: TGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGG...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTGGAGGGTGTGTGCACTaGCATCTCAGCCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFGGCVH*HLSLCS
Trigger: AGAACAAAGGCTGAGATGGCAGTGCACACACCCTCC...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAAGTGCGATGGAGGAACTaGACTTCTATTTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQVRWRN*TSISCQ
Trigger: CTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCAC...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGTCTGTCTCCACTGCCTaGGACTCCAACGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMSVSTA*DSNVFP
Trigger: GGGGAAGACGTTGGAGTCCCAGGCAGTGGAGACAGA...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGATGGTGTTCACCCAGTaGCCGTGGCCTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRMVFTQ*PWPCRV
Trigger: GACTCTGCAAGGCCACGGCCACTGGGTGAACACCAT...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCACCAGGACAGAGTCTACATGGGTGGGGAGATAGAAAACAGGCAGCTAGGCAACAGCTTCCTGCCATCTaGAGACCAGGATATACTAAG +
Preference number: 4 (lower is better)
Translates to: PPGQSLHGWGDRKQAARQQLPAI*RPGYTK
Trigger: CTTAGTATATCCTGGTCTCCAGATGGCAGGAAGCTG...TTGCCTAGCTGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTGTCCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCGGCCACTATCACAACTaGCCTCTCTCTTACCAACAC +
Preference number: 4 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSGHYHN*PLSYQH
Trigger: GTGTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCC...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTCAGCAGACAAACAGCTaGCACCAAGGAGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCQQTNS*HQGAQW
Trigger: CCACTGAGCTCCTTGGTGCCAGCTGTTTGTCTGCTG...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGCGTCAATGGCTAGGTTaGATAAGGCTGTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPERQWLG*IRLFKV
Trigger: GACCTTAAACAGCCTTATCCAACCTAGCCATTGACG...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTGCAGACAGCCCTTTGGTTaGAAATATCCCATAATGAGG +
Preference number: 4 (lower is better)
Translates to: GREGRQVPGQCGFGVVQCRQPFG*KYPIMR
Trigger: CCTCATTATGGGATATTTCCAACCAAAGGGCTGTCT...GCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGAGCTTTCCTTCTGCCTaGGTCAAGAAGCATCAATTC +
Preference number: 4 (lower is better)
Translates to: YQLLLQEVAKTQENELPESFPSA*VKKHQF
Trigger: GAATTGATGCTTCTTGACCCAGGCAGAAGGAAAGCT...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCGCAAAGAATCGTCCATaGATCTTCAACAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGAKNRP*IFNKIL
Trigger: CAAAATCTTGTTGAAGATCCATGGACGATTCTTTGC...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTCCTGTTACAGGAGGTaGCCAAGACACAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSSCYRR*PRHRRM
Trigger: CATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGA...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 72 bp GCATCCCCTGGAGCAGGGCTGACCAGCAGAACTCTCTaGATGATGAAAACCTTTCTGTGTGCTGTCCAATAC +
Preference number: 4 (lower is better)
Translates to: ASPGAGLTSRTL*MMKTFLCAVQY
Trigger: GTATTGGACAGCACACAGAAAGGTTTTCATCATCAAGAGAGTTCTGCTGGTCAGCCCTGCTCCAGGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 72 bp ACTCACCATAATGTAGAAACTGTGGGAGCCCTGAGCTaGTTTTCCTGCAACGAGAGGGTCCCATTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: THHNVETVGALS*FSCNERVPFGG
Trigger: ACCCCCAAATGGGACCCTCTCGTTGCAGGAAAACAAGCTCAGGGCTCCCACAGTTTCTACATTATGGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTGTCTTGGGGATTAACTaGGGCCTCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFVLGIN*GLSRFK
Trigger: TTTGAACCTGCTGAGGCCTCAGTTAATCCCCAAGAC...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTATAGAACCTGGGATCTaGCCCTGTACAGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFIEPGI*PCTELT
Trigger: TGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTAT...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTATAGAACCTGGGATCTaGCCCTGTACAGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLIEPGI*PCTELT
Trigger: TGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTAT...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGATTCCTTTCACTGCTTaGAAGTTCTCGTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLIPFTA*KFSWQR
Trigger: TCTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAAT...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTCTCACTGCAGATATGTaGAAGGTGGAGGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCLTADM*KVEAKH
Trigger: GTGCTTGGCCTCCACCTTGCACATATCTGCAGTGAG...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGCAGGAGAGTAGTACATaGTTCGGGGCAGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRQESST*FGAGVP
Trigger: TGGAACCCCTGCCCCGAAGCATGTACTACTCTCCTG...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTGATCCTTGGAGGTCTTaGGGATTAACTGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLDPWRS*GLTEAS
Trigger: TGAGGCCTCAGTTAATCCCCAAGACCTCCAAGGATC...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATGTGCTGTCCAATACTaGAGGCCTTACCCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRCAVQY*RPYPVR
Trigger: TCGCACTGGGTAAGGCCTCCAGTATTGGACAGCACA...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGACTTTGGGGCAGGGCCTaGTTTAATCCCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRLWGRA*FNPSFL
Trigger: GAGAAAGCTGGGATTAAACCAGGCCCTGCCCCAAAG...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTTGTCATGGACAGACGTaGTGGCCCATGAACTGTCAA +
Preference number: 4 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVCHGQT*WPMNCQ
Trigger: TTGACAGTTCATGGGCCACCACGTCTGTCCATGACA...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTAGTACAGACAGCCCTTTaGTTGGAAATATCCCATAAT +
Preference number: 4 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALVQTAL*LEISHN
Trigger: ATTATGGGATATTTCCAACCAAAGGGCTGTCTGTAC...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCTACAAAGTGAGCCCTaGGAAAAGAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMLQSEP*EKRGLG
Trigger: CCCAAGGCCCCTCTTTTCCCAGGGCTCACTTTGTAG...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR TCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGTCCTGTCATCCGAGTaGGAGGCTTTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRVLSSE*EAFCPL
Trigger: CAGAGGACAAAAAGCCTCTCACTCGGATGACAGGAC...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCATCCCAGAGGAGAATCTaGCCATTCTTGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MSCPRQRIVHGSSTRFWASQRRI*PFLQPE
Trigger: CTCAGGCTGCAAGAATGGCCAGATTCTCCTCTGGGA...TGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGTGCAAGGGCGGGGGCTaGACAATCTCATTTAGCACA +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRCKGGG*TISFST
Trigger: TGTGCTAAATGAGATTGTCCAGCCCCCGCCCTTGCA...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCATATACAAGGATGGTTTaGAAATCCAATCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GVCTAISAFVLWQGRQLAYTRMV*KSNLSS
Trigger: ACTACTCAGATTGGATTTCCAAACCATCCTTGTATA...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTTATACAAGGATGGTTTaGAAATCCAATCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGYTRMV*KSNLSS
Trigger: ACTACTCAGATTGGATTTCCAAACCATCCTTGTATA...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCTTTGGGGCAGGGCCTaGTTTAATCCCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMLWGRA*FNPSFL
Trigger: GAGAAAGCTGGGATTAAACCAGGCCCTGCCCCAAAG...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTGTGCACAATAAGCTTTaGGGCAGGGCCTGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLVHNKL*GRAWFN
Trigger: ATTAAACCAGGCCCTGCCCCAAAGCTTATTGTGCAC...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTTTCAGTTTGCAACCCTaGCCACTGACTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCFSLQP*PLTSAA
Trigger: AGCTGCTGAAGTCAGTGGCCAGGGTTGCAAACTGAA...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTGCAAAGAATCGTCCATaGATCTTCAACAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSAKNRP*IFNKIL
Trigger: CAAAATCTTGTTGAAGATCCATGGACGATTCTTTGC...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 72 bp TACTGCAGTGGACAACAATACAGCCCTAGATTCTCCTaGGCCACTATCACAACTGGCCTCTCTCTTACCAAC +
Preference number: 4 (lower is better)
Translates to: YCSGQQYSPRFS*ATITTGLSLTN
Trigger: GTTGGTAAGAGAGAGGCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGCTGTATTGTTGTCCACTGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGTGGTTGATGAGAGCTTaGTGTCCTGTCATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRWLMRA*CPVIRV
Trigger: CACTCGGATGACAGGACACCAAGCTCTCATCAACCA...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGACTGGACGGAGGGATGTaGTACAAAGTGCACAATAAG +
Preference number: 4 (lower is better)
Translates to: HRRMSCPRQRIVHGSSTRLDGGM*YKVHNK
Trigger: CTTATTGTGCACTTTGTACCACATCCCTCCGTCCAG...TCTTGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTCAGAGTCTACATGGGTaGGGAGATAGAAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCQSLHG*GDRKQA
Trigger: TGCCTGTTTTCTATCTCCCCACCCATGTAGACTCTG...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGTCCTGTTACAGGAGGTaGCCAAGACACAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: PWIFNKILGTTVKLMELKSCYRR*PRHRRM
Trigger: CATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGA...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 72 bp TGGGGTCTGAGTCCTGATGGGAATTCCTTTCACTGCTaGAAAGTTCTCGTGGCAAAGAACTTCCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: WGLSPDGNSFHC*KVLVAKNFLCI
Trigger: GATACAGAGGAAGTTCTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAATTCCCATCAGGACTCAGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp CCAAGGAGCTCAGTGGCTGATAGTTTTGTTCGCTTCTTATGTAGCCTCACTGCAGCATCAATTCCAGAATaGATGCTTCTGGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PRSSVADSFVRFLCSLTAASIPE*MLLGGL
Trigger: TAAACCTCCCAGAAGCATGCATTCTGGAATTGATGC...TGCAGTGAGGCTACATAAGAAGCGAACAAAACTATCAGCCACTGAGCTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTGCATCAATTCCAGAATaGATGCTTCTGGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCASIPE*MLLGGL
Trigger: TAAACCTCCCAGAAGCATGCATTCTGGAATTGATGC...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCTAGATGTGAGGGCATaGGCTAATCATTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLLDVRA*ANHFLC
Trigger: ACATAAGAAATGATTAGCCCATGCCCTCACATCTAG...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp ACCCAAAAGCACAGACAAGGGTGGAGGAGGGTAAGAAGGAGCAAGATGCTAGTTCCCTTCCAAAGCCATTaGTTTTTAGACTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: TQKHRQGWRRVRRSKMLVPFQSH*FLDSAI
Trigger: AATTGCAGAGTCTAAAAACCAATGGCTTTGGAAGGG...AACTAGCATCTTGCTCCTTCTTACCCTCCTCCACCCTTGTCTGTGCTTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
3UTR CAA 72 bp GAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTaGGGCACTACTGTCAAGCTGATGGAGCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EAKNRPWIFNKI*GTTVKLMELKP
Trigger: AGGCTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CCA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGTTTGGTCATAGAACCTaGGATCTGACCCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: PWIFNKILGTTVKLMELKFGHRT*DLTLYR
Trigger: TCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAA...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR GCA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGTTGGTTTTTAGACTCTaGAATTCAGTGCCCATGATT +
Preference number: 4 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMLVFRL*NSVPMI
Trigger: AATCATGGGCACTGAATTGCAGAGTCTAAAAACCAA...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS CCA 90 bp CGCCACCGCCTCGTCCTGCGCGAGCAAGTGGGGCGGGAGTCAGTCTaGTCGCCCGCCCAGAAGGGCCCCACTTCGCCTCTCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: RHRLVLREQVGRESV*SPAQKGPTSPLSGL
Trigger: GAGGCCTGAGAGAGGCGAAGTGGGGCCCTTCTGGGCGGGCGACCAGACTGACTCCCGCCCCACTTGCTCGCGCAGGACGAGGCGGTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS CCA 90 bp AACCGCTGCACATCGCGCGCCACCGCCTCGTCCTGCGCGAGCAAGTaGGGCGGGAGTCAGTCTGGTCGCCCGCCCAGAAGGGCCCCACTT +
Preference number: 5 (lower is better)
Translates to: NRCTSRATASSCASK*GGSQSGRPPRRAPL
Trigger: AAGTGGGGCCCTTCTGGGCGGGCGACCAGACTGACTCCCGCCCCACTTGCTCGCGCAGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS TCA 90 bp CCTGGGCCAGTAGCGCGTTGCACACGAGCTGCAGCCTGTCCGGGGTaGTGTCCACGGGCACGTCGAACGGGGAACCCAGCAGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PGPVARCTRAAACPG*CPRARRTGNPAAAR
Trigger: GCGGGCAGCTGCTGGGTTCCCCGTTCGACGTGCCCGTGGACATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588642.1
ENST00000589367.5
ENST00000593176.1
CDS GCA 90 bp CCCAGCAGCTGCCCGCCCTCATCCTGGAACTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCCTCGTCCGGCACTGCTGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: PSSCPPSSWNCTSNR*TSRATASSGTAAAI
Trigger: GATGGCGGCAGCAGTGCCGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCAGCTGCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000588642.1
ENST00000589367.5
CDS GCA 90 bp CCCAGCAGCTGCCCGCCCTCATCCTGGAACTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCCTCGTCCTGCGCGAGCAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PSSCPPSSWNCTSNR*TSRATASSCASKWG
Trigger: GCCCCACTTGCTCGCGCAGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCAGCTGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS GCA 90 bp ACGTCGAACGGGGAACCCAGCAGCTGCCCGCCCTCATCCTGGAACTaGACTAGCAACCGCTGCACATCGCGCGCCACCGCCTCGTCCGGC +
Preference number: 5 (lower is better)
Translates to: TSNGEPSSCPPSSWN*TSNRCTSRATASSG
Trigger: GCCGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCCGTTCGACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000588642.1
ENST00000589367.5
CDS GCA 90 bp AACTGCACTAGCAACCGCTGCACATCGCGCGCCACCGCCTCGTCCTaGGCGAGCAAGTGGGGCGGGAGTCAGTCTGGTCGCCCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: NCTSNRCTSRATASS*ASKWGGSQSGRPPR
Trigger: TCTGGGCGGGCGACCAGACTGACTCCCGCCCCACTTGCTCGCGCAGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS GCA 90 bp ACGTCGAACGGGGAACCCAGCAGCTGCCCGCCCTCATCCTGGAACTaGACTAGCAACCGCTGCACATCGCGCGCCACCGCCTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TSNGEPSSCPPSSWN*TSNRCTSRATASSC
Trigger: GCAGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCCGTTCGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS GCA 90 bp AGCCACTGGCCAGGTACCTGGGCCAGTAGCGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATGTCCACGGGCACGTCGAACGGGGAA +
Preference number: 5 (lower is better)
Translates to: SHWPGTWASSALHTS*SLSGVMSTGTSNGE
Trigger: TTCCCCGTTCGACGTGCCCGTGGACATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCCAGGTACCTGGCCAGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588642.1
CDS-3UTR CAA 90 bp TCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGCCAGTGGCCGTGGCCTaGCAGAGTCCGGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: SRTAGHTHSQVPTGGEGVPVAVA*QSPAQH
Trigger: GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGG...CACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp AGGGCCATGGTGTTCACCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCAGTGGCCGTGGCCTaGCAGAGTCCGGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: RAMVFTQWPWPCRVRHSTPVAVA*QSPAQH
Trigger: GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGG...TGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CAA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTTGGCCCCGCACGAGGTaGTATCGGCTCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: RQLAEAESRWGSERTSGRWPRTR*YRLRAL
Trigger: GAGGGCTCTGAGCCGATACAACCTCGTGCGGGGCCA...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS GCA 90 bp TCCGGGGTGATGTCCACGGGCACGTCGAACGGGGAACCCAGCAGCTaGCCGCCCTCATCCTGGAACTGCACTAGCAACCGCTGCACATCG +
Preference number: 5 (lower is better)
Translates to: SGVMSTGTSNGEPSS*PPSSWNCTSNRCTS
Trigger: CGATGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCCGTTCGACGTGCCCGTGGACATCACCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588642.1
ENST00000589367.5
ENST00000593176.1
CDS CCA 90 bp CTGCTGCCGCTGACCAGGAGCCGACTGTCAGCTGACCACGCAATCTaGTACACGGCAGCCACGTGGCCGCGTAGGGAAGCCAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: LLPLTRSRLSADHAI*YTAATWPRREARYL
Trigger: CAGGTACCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTCCTGGTCAGCGGCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS-3UTR CAA 90 bp CCCAGTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCCACAGCGGCCTGCAGTaGTGTCCCAGATCCGCACAC +
Preference number: 5 (lower is better)
Translates to: PSGRGLAESGTAHRHELSHSGLQ*CPRSAH
Trigger: GTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG...GGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CAA 90 bp AGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATCCAGTGGCCGTGGCCTaGCAGAGTCCGGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: RPHAFSGPHWWGGCVHCHPVAVA*QSPAQH
Trigger: GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGG...ATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATGGCCCCGCACGAGGTaGTATCGGCTCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: QATRILRSPLVGRVCALPWPRTR*YRLRAL
Trigger: GAGGGCTCTGAGCCGATACAACCTCGTGCGGGGCCA...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GTCCCCTCCCCACCGGAGACAGGTGACCGACTGGGTGTGCCCGGTGAGGATGCGCCTGCTTCCCTGTGCTaGGGTCCCAGAGGAGAATCT +
Preference number: 5 (lower is better)
Translates to: VPSPPETGDRLGVPGEDAPASLC*GPRGES
Trigger: AGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGG...CGCATCCTCACCGGGCACACCCAGTCGGTCACCTGTCTCCGGTGGGGAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS CCA 90 bp AGCCGACTGTCAGCTGACCACGCAATCTGGTACACGGCAGCCACGTaGCCGCGTAGGGAAGCCAGGTACTTGCCCGTCCTGCCATCCCAC +
Preference number: 5 (lower is better)
Translates to: SRLSADHAIWYTAAT*PRREARYLPVLPSH
Trigger: GTGGGATGGCAGGACGGGCAAGTACCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS CCA 90 bp CTGCTGCCGCTGACCAGGAGCCGACTGTCAGCTGACCACGCAATCTaGTACACGGCAGCCACGTGGCCGCGTAGGGAAGCCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: LLPLTRSRLSADHAI*YTAATWPRREARYL
Trigger: CAAGTACCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTCCTGGTCAGCGGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGAGGCCTGTGATCCACTaGCTGTGGCCAGCGAGGGTC +
Preference number: 5 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVRPVIH*LWPARV
Trigger: GACCCTCGCTGGCCACAGCAAGTGGATCACAGGCCT...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACAGCGGCCTGCAGTaGTGTCCCAGATCCGCACAC +
Preference number: 5 (lower is better)
Translates to: EDSRPHAFSGPHWWGGCVHSGLQ*CPRSAH
Trigger: GTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG...CACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS GCA 90 bp GGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTaGCATCCTTGGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GCAHSGLQLCPRSAH*HPWSCWPHSGTQGS
Trigger: GGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593176.1
CDS-3UTR CAA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGGCCAGTAGCGCGTaGCACACGAGCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GRVCALPSQPLFSGREGSWASSA*HTSCSL
Trigger: CAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCCA...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTTGGGCCAGTAGCGCGTaGCACACGAGCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: DALTAACSCVPDPHTAILWASSA*HTSCSL
Trigger: CAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCCA...AAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CAA 90 bp GAGGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCACAGCGGCCTGCAGTaGTGTCCCAGATCCGCACAC +
Preference number: 5 (lower is better)
Translates to: EDALTAACSCVPDPHTAIHSGLQ*CPRSAH
Trigger: GTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG...GATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CAA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCCTGCCATCTCAGCCTTaGTTCTCTGGCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: EGSWQRPSRGGGQRELRALPSQP*FSGREG
Trigger: GCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAG...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGCCAGGGCTTTGGAGGTaGGGAACACCCCTATGCCCA +
Preference number: 5 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPEPGLWR*GTPLCP
Trigger: TGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCTGG...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp ATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGCAGGGAACCAGGGCTTaGGAGGTTGGGAACACCCCT +
Preference number: 5 (lower is better)
Translates to: ITVRRKEPRQKIVSIGPEQGTRA*EVGNTP
Trigger: AGGGGTGTTCCCAACCTCCAAAGCCCTGGTTCCCTG...CTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCACGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS CCA 90 bp CACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCCTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: HSGLQLCPRSAHCHP*SCWPHSGTQGSWPF
Trigger: GAATGGCCAGGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593176.1
CDS-3UTR CAA 90 bp GTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGTGGGCCAGTAGCGCGTaGCACACGAGCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: VCTAISAFVLWQGRQLAEWASSA*HTSCSL
Trigger: CAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCCA...CTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCACAGCGGCCTGCAGTaGTGTCCCAGATCCGCACAC +
Preference number: 5 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQHSGLQ*CPRSAH
Trigger: GTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCATGGCCCCGCACGAGGTaGTATCGGCTCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GVCTAISAFVLWQGRQLAWPRTR*YRLRAL
Trigger: GAGGGCTCTGAGCCGATACAACCTCGTGCGGGGCCA...TGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGCGAGTGAGAGGCTTTTaGTCCTCTGCTGGGGACCAC +
Preference number: 5 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMRVRGF*SSAGDH
Trigger: GTGGTCCCCAGCAGAGGACAAAAAGCCTCTCACTCG...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GTGGCCGTGGCCTTGCAGAGTCCGGCACAGCACACCGTCATGAGCTCTCCAGACCCTGCTTCCCTGTGCTaGGGTCCCAGAGGAGAATCT +
Preference number: 5 (lower is better)
Translates to: VAVALQSPAQHTVMSSPDPASLC*GPRGES
Trigger: AGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGG...GTCTGGAGAGCTCATGACGGTGTGCTGTGCCGGACTCTGCAAGGCCACGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS GCA 90 bp GGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACTCAGGGTTCCTGGCCATTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GLQLCPRSAHCHPWS*WPHSGTQGSWPFLQ
Trigger: CTGCAAGAATGGCCAGGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593176.1
CDS-3UTR CAA 90 bp TGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCCCTGCTTCCCTGTGCTaGGGTCCCAGAGGAGAATGG +
Preference number: 5 (lower is better)
Translates to: CTAISAFVLWQGRQLAEAPASLC*GPRGEW
Trigger: CCATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGG...GGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360831.9
CDS-3UTR CAA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCACACAGCGGCCTGCAGTaGTGTCCCAGATCCGCACAC +
Preference number: 5 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPHSGLQ*CPRSAH
Trigger: GTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGCCAGTGGCCGTGGCCTaGCAGAGTCCGGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: HGPSSVTTSCDLRFLALGPVAVA*QSPAQH
Trigger: GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGG...CCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGCCAGTGGCCGTGGCCTaGCAGAGTCCGGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEPVAVA*QSPAQH
Trigger: GTGCTGTGCCGGACTCTGCAAGGCCACGGCCACTGG...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTCTCCTGCAAGGATCCTaGGAGGTCTTGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: RQLAEAESRWGSERTSGRLLQGS*EVLGIN
Trigger: GTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGAG...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GCCAGCAGTCACATGTGGCCGGTGCCTACTGCAGTGGACAACAATACAGCCCTATGGCCCCGCACGAGGTaGTATCGGCTCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: ASSHMWPVPTAVDNNTALWPRTR*YRLRAL
Trigger: GAGGGCTCTGAGCCGATACAACCTCGTGCGGGGCCA...TAGGGCTGTATTGTTGTCCACTGCAGTAGGCACCGGCCACATGTGACTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCTGTCCTTCCCACCACTaGCCACTCTCTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: GCPPPLSVPARYRVADTGCPSHH*PLSGHL
Trigger: CAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACA...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGCTGCCCACCACCCCTGTCTGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCCTGCTTCCCTGTGCTaGGGTCCCAGAGGAGAATCT +
Preference number: 5 (lower is better)
Translates to: GCPPPLSVPARYRVADTGPASLC*GPRGES
Trigger: AGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGG...GCCCGTGTCTGCTACTCTGTACCTTGCTGGTACAGACAGGGGTGGTGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCATGGACTGCTATCAGTaGGTGGCCCAAGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCMDCYQ*VAQGLR
Trigger: CCTCAACCCTTGGGCCACCAACTGATAGCAGTCCAT...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS CCA 90 bp CCGGAGGCATTTGTCCTTCCCACCACTTGCCACTCTCTGGCCATCTaGACTCCAGTCAACAGCATATACCTCATCCGCGTGGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: PEAFVLPTTCHSLAI*TPVNSIYLIRVAGQ
Trigger: CTGCCCGGCCACGCGGATGAGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACAAATGCCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CCA 90 bp TTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCGGGCCGTCTCATCTCCTCCATATCC +
Preference number: 5 (lower is better)
Translates to: FVLWQGRQLAEAESR*GSERTSGRLISSIS
Trigger: GGATATGGAGGAGATGAGACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CCA 90 bp CTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAGGGTTCCTGGCCATTCTTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQLCPRSAHCHPWSC*PHSGTQGSWPFLQP
Trigger: AGGCTGCAAGAATGGCCAGGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593176.1
CDS-3UTR CAA 90 bp CCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGCTCCTGCAAGGATCCTaGGAGGTCTTGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: PVYRGQQATRILRSPLVGLLQGS*EVLGIN
Trigger: GTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGAG...CCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGCGAGTGAGAGGCTTTTaGTCCTCTGCTGGGGACCAC +
Preference number: 5 (lower is better)
Translates to: PIPVYRGQQATRILRSPLRVRGF*SSAGDH
Trigger: GTGGTCCCCAGCAGAGGACAAAAAGCCTCTCACTCG...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCGAGTGAGAGGCTTTTaGTCCTCTGCTGGGGACCAC +
Preference number: 5 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQRVRGF*SSAGDH
Trigger: GTGGTCCCCAGCAGAGGACAAAAAGCCTCTCACTCG...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp AGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCCTGGTTGATGAGAGCTaGGTGTCCTGTCATCCGAGT +
Preference number: 5 (lower is better)
Translates to: RTAGHTHSQVPTGGEGVCLVDES*VSCHPS
Trigger: ACTCGGATGACAGGACACCAAGCTCTCATCAACCAG...GCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTTGTCCTTCCCACCACTaGCCACTCTCTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTCPSHH*PLSGHL
Trigger: CAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACA...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp AGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCGTCAGTGTCTGTGTCCCTaGCATGTGAAATGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: RQLAEAESRWGSERTSGRQCLCP*HVKCGV
Trigger: GACACCACATTTCACATGCAAGGGACACAGACACTG...ACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCACAGGGAACCAGGGCTTaGGAGGTTGGGAACACCCCT +
Preference number: 5 (lower is better)
Translates to: PWASSRSVSTSSCYRRWPQGTRA*EVGNTP
Trigger: AGGGGTGTTCCCAACCTCCAAAGCCCTGGTTCCCTG...TGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTGACCGGCTGCTTGCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCGAGTGAGAGGCTTTTaGTCCTCTGCTGGGGACCAC +
Preference number: 5 (lower is better)
Translates to: CALPSQPLFSGREGSWQRRVRGF*SSAGDH
Trigger: GTGGTCCCCAGCAGAGGACAAAAAGCCTCTCACTCG...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp AGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCATCTGGTTGATGAGAGCTaGGTGTCCTGTCATCCGAGT +
Preference number: 5 (lower is better)
Translates to: RPHAFSGPHWWGGCVHCHLVDES*VSCHPS
Trigger: ACTCGGATGACAGGACACCAAGCTCTCATCAACCAG...ATGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCGAGAAGAGCACCTGGTaGATGAGAGCTTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: ALRNQSHETYHTTSTLRAEKSTW*MRAWCP
Trigger: AGGACACCAAGCTCTCATCAACCAGGTGCTCTTCTC...GGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGCATATCCGGAGGCATTaGTCCTTCCCACCACTTGCC +
Preference number: 5 (lower is better)
Translates to: PIPVYRGQQATRILRSPLHIRRH*SFPPLA
Trigger: GGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATG...CAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp TGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGAGGCTGCCATCTCAGCCTTaGTTCTCTGGCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: CALPSQPLFSGREGSWQRLPSQP*FSGREG
Trigger: GCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAG...CCTCTGCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp AGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCAACTGTCAAACTAGCTaGAGCTCTGGACGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: SRPHAFSGPHWWGGCVHCNCQTS*SSGRRD
Trigger: ATCCCTCCGTCCAGAGCTCAAGCTAGTTTGACAGTT...GCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GAAGGCAGCTGGCAGAGGCCGAGTCGAGGTGGGGGTCAGAGAGAACTTCGGGCCTTGTTTCACTTCAGTTaGCAACCCTGGCCACTGACT +
Preference number: 5 (lower is better)
Translates to: EGSWQRPSRGGGQRELRALFHFS*QPWPLT
Trigger: AGTCAGTGGCCAGGGTTGCAAACTGAAGTGAAACAA...GGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTCTCCTGCAAGGATCCTaGGAGGTCTTGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTLLQGS*EVLGIN
Trigger: GTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGAG...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCCTCCTGCAAGGATCCTaGGAGGTCTTGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: GRVCALPSQPLFSGREGSLLQGS*EVLGIN
Trigger: GTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGAG...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCGAGAAGAGCACCTGGTaGATGAGAGCTTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGEKSTW*MRAWCP
Trigger: AGGACACCAAGCTCTCATCAACCAGGTGCTCTTCTC...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCACAGCTTGATGGACTaGTCAAAGGAGGCACTAGCC +
Preference number: 5 (lower is better)
Translates to: GEGVCTAISAFVLWQGRQHSLMD*SKEALA
Trigger: GGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTG...CTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTGTCCTTCCCACCACTaGCCACTCTCTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHCPSHH*PLSGHL
Trigger: CAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACA...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp TGGGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCACATATCCGGAGGCATTaGTCCTTCCCACCACTTGCC +
Preference number: 5 (lower is better)
Translates to: WGGCVHCHLSLCSLAGKAHIRRH*SFPPLA
Trigger: GGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATG...TGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp GGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCAGTGCCTGCCATCTCAGCCTTaGTTCTCTGGCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GREGRQVPGQCGFGVVQCLPSQP*FSGREG
Trigger: GCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAG...GCACTGGACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGATGCGCTCACAGCGGCCTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTCAGTGTCTGTGTCCCTaGCATGTGAAATGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: GCAHSGLQLCPRSAHCHPQCLCP*HVKCGV
Trigger: GACACCACATTTCACATGCAAGGGACACAGACACTG...AGGATGGCAGTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTGAGCGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CAA 90 bp CCCACCTGCTTCCCTGTGCTTGGGTCCCAGAGGAGAATCTGGCCATTCTTGCAGAGAATCTGGCCATTCTaGCAGCCTGAGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PTCFPVLGSQRRIWPFLQRIWPF*QPEASF
Trigger: GAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCT...CTGCAAGAATGGCCAGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588642.1
ENST00000589367.5
CDS-3UTR CAA 90 bp ACACGGGGGAAGAGAGGGAAGGCAAGTGCCTGGTCAGTGTGGTTTTGGCGTAGTCCTGCTTCCCTGTGCTaGGGTCCCAGAGGAGAATCT +
Preference number: 5 (lower is better)
Translates to: TRGKRGKASAWSVWFWRSPASLC*GPRGES
Trigger: AGATTCTCCTCTGGGACCCAAGCACAGGGAAGCAGG...ACTACGCCAAAACCACACTGACCAGGCACTTGCCTTCCCTCTCTTCCCCCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCAGCCCTAGATTCTCCTaGGCCACTATCACAACTGGC +
Preference number: 5 (lower is better)
Translates to: GRVCALPSQPLFSGREGSSPRFS*ATITTG
Trigger: GCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGCT...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCTGGCAGCCCTAGATTCTCCTaGGCCACTATCACAACTGGC +
Preference number: 5 (lower is better)
Translates to: GCVHCHLSLCSLAGKAAGSPRFS*ATITTG
Trigger: GCCAGTTGTGATAGTGGCCAAGGAGAATCTAGGGCT...GCCAGCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTCAGTGCTGCAGTACCTaGCACCTTCCATCTGACCTG +
Preference number: 5 (lower is better)
Translates to: HSGLSRTAGHTHSQVPTGQCCST*HLPSDL
Trigger: CAGGTCAGATGGAAGGTGCAAGGTACTGCAGCACTG...ACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS TCA 90 bp CTCCTTCAACTCCTGCAAGGATCCTTGGAGGTCTTGGGGATTAACTaGGGCCTCAGCAGGTTCAAAGGCCCCAGTGCGCAGGGCATAGTC +
Preference number: 5 (lower is better)
Translates to: LLQLLQGSLEVLGIN*GLSRFKGPSAQGIV
Trigger: GACTATGCCCTGCGCACTGGGGCCTTTGAACCTGCTGAGGCCTCAGTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGAGTTGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS TCA 90 bp GATCGTGCCGCTGCACTCGAGCCACTTGAACACCAGGTGACAGAGTaGAAGTCATCTTTGCCCGTCCTGCCATCCCACAGCTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: DRAAALEPLEHQVTE*KSSLPVLPSHSLMD
Trigger: GTCCATCAAGCTGTGGGATGGCAGGACGGGCAAAGATGACTTTCACTCTGTCACCTGGTGTTCAAGTGGCTCGAGTGCAGCGGCACGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS-3UTR CAA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGTCCTTCCCACCACTaGCCACTCTCTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: QEVAKTQENELPEAKNRPCPSHH*PLSGHL
Trigger: CAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACA...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp ACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACCAGTGTCTGTGTCCCTaGCATGTGAAATGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: TPFRSIEDSRPHAFSGPHQCLCP*HVKCGV
Trigger: GACACCACATTTCACATGCAAGGGACACAGACACTG...GTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCCAAAAGTTTTGGAGCTaGAGAACCTTCCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRVCALPSQPLFSGREGSQKFWS*RTFQAW
Trigger: CCAGGCCTGGAAGGTTCTCAAGCTCCAAAACTTTTG...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTGTGTGCACTGCCACAGACAGCCCTTTGGTaGGAAATATCCCATAATGAG +
Preference number: 5 (lower is better)
Translates to: QATRILRSPLVGRVCALPQTALW*EISHNE
Trigger: CTCATTATGGGATATTTCCAACCAAAGGGCTGTCTG...TGGCAGTGCACACACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS CCA 90 bp AAGGAGGCACTAGCCACGATGCGGGAGTCAGGAGAGAAGAGCACCTaGTTGATGAGAGCTTGGTGTCCTGTCATCCGAGTGAGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: KEALATMRESGEKST*LMRAWCPVIRVRGF
Trigger: AAAGCCTCTCACTCGGATGACAGGACACCAAGCTCTCATCAACCAGGTGCTCTTCTCTCCTGACTCCCGCATCGTGGCTAGTGCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCACAGCGGCCTGCAGTaGTGTCCCAGATCCGCACAC +
Preference number: 5 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFHSGLQ*CPRSAH
Trigger: GTGTGCGGATCTGGGACACAACTGCAGGCCGCTGTG...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGATCTGTGGGAAAACCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATCTGGTTGATGAGAGCTaGGTGTCCTGTCATCCGAGT +
Preference number: 5 (lower is better)
Translates to: GSVGKPHSGLSRTAGHTHLVDES*VSCHPS
Trigger: ACTCGGATGACAGGACACCAAGCTCTCATCAACCAG...ATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGGTTTTCCCACAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGCATATCCGGAGGCATTaGTCCTTCCCACCACTTGCC +
Preference number: 5 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLHIRRH*SFPPLA
Trigger: GGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATG...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCACATATCCGGAGGCATTaGTCCTTCCCACCACTTGCC +
Preference number: 5 (lower is better)
Translates to: QEVAKTQENELPEAKNRPHIRRH*SFPPLA
Trigger: GGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATG...TGGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTGGTGGGGAGGGTCATTTAGCACAGTCCTaGATTGAGTCATGGGGATTC +
Preference number: 5 (lower is better)
Translates to: LSRTAGHTHSQVPTGGEGHLAQS*IESWGF
Trigger: GAATCCCCATGACTCAATCAAGGACTGTGCTAAATG...ACCCTCCCCACCAGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGAATTCCTTTCACTGCTaGAAAGTTCTCGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMNSFHC*KVLVAK
Trigger: CTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAATT...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGATCTTCAACAAGATTTaGGGCACTACTGTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: VRRKEPRQKIVSIGPEEMIFNKI*GTTVKL
Trigger: CAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGAT...CATCTCCTCCGGCCCGATGGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGATCTGTGGGAAAACACAGGAGAATGAGTaGCCCGAGGCAAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: VTFDFWLWGVPQAGICGKTQENE*PEAKNR
Trigger: ACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGT...TTTCCCACAGATCCCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS TCA 90 bp AGAGGTTGTAATGAGCCAAGATCGTGCCGCTGCACTCGAGCCACTTaGACACCAGGTGACAGAGTGAAAGTCATCTTTGCCCGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: RGCNEPRSCRCTRAT*TPGDRVKVIFARPA
Trigger: GGCAGGACGGGCAAAGATGACTTTCACTCTGTCACCTGGTGTTCAAGTGGCTCGAGTGCAGCGGCACGATCTTGGCTCATTACAACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS-3UTR CAA 90 bp AGAGTAGTACATGCTTCGGGGCAGGGGTTCCACACTCAGTGCTGCAGTACCTTGCACAGCTTGATGGACTaGTCAAAGGAGGCACTAGCC +
Preference number: 5 (lower is better)
Translates to: RVVHASGQGFHTQCCSTLHSLMD*SKEALA
Trigger: GGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTG...CAAGGTACTGCAGCACTGAGTGTGGAACCCCTGCCCCGAAGCATGTACTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS GCA 90 bp GTCTCATCTCCTCCATATCCGGAGGCATTTGTCCTTCCCACCACTTaGCACTCTCTGGCCATCTGGACTCCAGTCAACAGCATATACCTC +
Preference number: 5 (lower is better)
Translates to: VSSPPYPEAFVLPTT*HSLAIWTPVNSIYL
Trigger: GAGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATGGAGGAGATGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS-3UTR CAA 90 bp AAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCTGCCATCTCAGCCTTaGTTCTCTGGCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: KVQSSRHGPSSVTTSCDLLPSQP*FSGREG
Trigger: GCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAG...AAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCCTTGCATGTGAAATGTGGTGTCTCTGTGCTGAGATCCCAGAAGCGCACGGTGCAGTGTCTGTGTCCCTaGCATGTGAAATGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: PLHVKCGVSVLRSQKRTVQCLCP*HVKCGV
Trigger: GACACCACATTTCACATGCAAGGGACACAGACACTG...CACCGTGCGCTTCTGGGATCTCAGCACAGAGACACCACATTTCACATGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589367.5
CDS-3UTR CAA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCAGAATCTGGCCATTCTaGCAGCCTGAGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSRIWPF*QPEASF
Trigger: GAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCT...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp AGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGGCCCACTCATAGAGCAAAAGTTTTGGAGCTaGAGAACCTTCCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RTWDLTLYRADTRGPLIEQKFWS*RTFQAW
Trigger: CCAGGCCTGGAAGGTTCTCAAGCTCCAAAACTTTTG...CTCTATGAGTGGGCCCCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCCCATTCCGGTCTATCGAGGACAGCAGGCCACACGCATTCTCAGGTCCCCACTTCCTCATCAAAAGTTTaGGAGCTTGAGAACCTTCCA +
Preference number: 5 (lower is better)
Translates to: PHSGLSRTAGHTHSQVPTSSSKV*ELENLP
Trigger: TGGAAGGTTCTCAAGCTCCAAAACTTTTGATGAGGA...AGTGGGGACCTGAGAATGCGTGTGGCCTGCTGTCCTCGATAGACCGGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GTGACAACTTCCTGTGACCTTCGATTTCTGGCTCTGGGGTGTGCCACAGGCGGGGGGAAGTCAAGGGCATaGAAAGAAATAGGGAAGACA +
Preference number: 5 (lower is better)
Translates to: VTTSCDLRFLALGCATGGGKSRA*KEIGKT
Trigger: TGTCTTCCCTATTTCTTTCAATGCCCTTGACTTCCC...CCCGCCTGTGGCACACCCCAGAGCCAGAAATCGAAGGTCACAGGAAGTTGTCAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp GGGAGGGTGTGTGCACTGCCATCTCAGCCTTTGTTCTCTGGCAGGGAAGGCAGCATCTTCAACAAGATTTaGGGCACTACTGTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: GRVCALPSQPLFSGREGSIFNKI*GTTVKL
Trigger: CAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGAT...GCTGCCTTCCCTGCCAGAGAACAAAGGCTGAGATGGCAGTGCACACACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGAATGAGTTGCCCGAGACACAGGAGAATGAGTaGCCCGAGGCAAAGAATCGT +
Preference number: 5 (lower is better)
Translates to: YQLLLQEVAKTQENELPETQENE*PEAKNR
Trigger: ACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGT...CTCGGGCAACTCATTCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTGTGGGAGCCCTGAGCTaGTTTTCCTGCAACGAGAGG +
Preference number: 5 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFVGALS*FSCNER
Trigger: CCTCTCGTTGCAGGAAAACAAGCTCAGGGCTCCCAC...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCGAGAAGAGCACCTGGTaGATGAGAGCTTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSEKSTW*MRAWCP
Trigger: AGGACACCAAGCTCTCATCAACCAGGTGCTCTTCTC...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTAGAATCTGGCCATTCTaGCAGCCTGAGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFRIWPF*QPEASF
Trigger: GAAGCTGGCCTCAGGCTGCAAGAATGGCCAGATTCT...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CTTTATGCTGCAGACAGCCTCAGATGGGCTGGCTGGCACCCACCTCCTAGCTTCAATTCCTTTCACTGCTaGAAAGTTCTCGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LYAADSLRWAGWHPPPSFNSFHC*KVLVAK
Trigger: CTTTGCCACGAGAACTTTCAAGCAGTGAAAGGAATT...GAAGCTAGGAGGTGGGTGCCAGCCAGCCCATCTGAGGCTGTCTGCAGCATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCACAGCTTGATGGACTaGTCAAAGGAGGCACTAGCC +
Preference number: 5 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFHSLMD*SKEALA
Trigger: GGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTG...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TGTACCAGCAAGGTACAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCAACTGTCAAACTAGCTaGAGCTCTGGACGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: CTSKVQSSRHGPSSVTTSNCQTS*SSGRRD
Trigger: ATCCCTCCGTCCAGAGCTCAAGCTAGTTTGACAGTT...GGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTGTACCTTGCTGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGCCAGGGCTTTGGAGGTaGGGAACACCCCTATGCCCA +
Preference number: 5 (lower is better)
Translates to: PWIFNKILGTTVKLMELKPGLWR*GTPLCP
Trigger: TGGGCATAGGGGTGTTCCCAACCTCCAAAGCCCTGG...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGGTGGGAGCCCTGAGCTaGTTTTCCTGCAACGAGAGG +
Preference number: 5 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMVGALS*FSCNER
Trigger: CCTCTCGTTGCAGGAAAACAAGCTCAGGGCTCCCAC...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTCACAGCTTGATGGACTaGTCAAAGGAGGCACTAGCC +
Preference number: 5 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCHSLMD*SKEALA
Trigger: GGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTG...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGCAGTGCTGCAGTACCTaGCACCTTCCATCTGACCTG +
Preference number: 5 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRQCCST*HLPSDL
Trigger: CAGGTCAGATGGAAGGTGCAAGGTACTGCAGCACTG...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGGAGAAGAGCACCTGGTaGATGAGAGCTTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: YLFGHRTWDLTLYRADTREKSTW*MRAWCP
Trigger: AGGACACCAAGCTCTCATCAACCAGGTGCTCTTCTC...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGATGGACTGCTATCAGTaGGTGGCCCAAGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PWIFNKILGTTVKLMELKMDCYQ*VAQGLR
Trigger: CCTCAACCCTTGGGCCACCAACTGATAGCAGTCCAT...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCAGTGGCTGATAGTTTaGTTCGCTTCTTATGTAGCC +
Preference number: 5 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFQWLIV*FASYVA
Trigger: GGCTACATAAGAAGCGAACAAAACTATCAGCCACTG...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTTTGTTTCACTTCAGTTaGCAACCCTGGCCACTGACT +
Preference number: 5 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCLFHFS*QPWPLT
Trigger: AGTCAGTGGCCAGGGTTGCAAACTGAAGTGAAACAA...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTCAGACAGCCCTTTGGTaGGAAATATCCCATAATGAG +
Preference number: 5 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFQTALW*EISHNE
Trigger: CTCATTATGGGATATTTCCAACCAAAGGGCTGTCTG...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CAGAGTAGCAGACACGGGCCAAGTTCAGTGACAACTTCCTGTGACCTTCGATTTTCCTCATCAAAAGTTTaGGAGCTTGAGAACCTTCCA +
Preference number: 5 (lower is better)
Translates to: QSSRHGPSSVTTSCDLRFSSSKV*ELENLP
Trigger: TGGAAGGTTCTCAAGCTCCAAAACTTTTGATGAGGA...AAATCGAAGGTCACAGGAAGTTGTCACTGAACTTGGCCCGTGTCTGCTACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TTACCCAGTGCGATGGAGGAACTGCACTTCTATTTCATGCCAGCAGTCACATGTGGGAAGTCAAGGGCATaGAAAGAAATAGGGAAGACA +
Preference number: 5 (lower is better)
Translates to: LPSAMEELHFYFMPAVTCGKSRA*KEIGKT
Trigger: TGTCTTCCCTATTTCTTTCAATGCCCTTGACTTCCC...ACATGTGACTGCTGGCATGAAATAGAAGTGCAGTTCCTCCATCGCACTGGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGCAGTGGCTGATAGTTTaGTTCGCTTCTTATGTAGCC +
Preference number: 5 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRQWLIV*FASYVA
Trigger: GGCTACATAAGAAGCGAACAAAACTATCAGCCACTG...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp TACTTATTTGGTCATAGAACCTGGGATCTGACCCTGTACAGAGCTGACACTAGGCCCCTTCCAAAGCCATaGGTTTTTAGACTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: YLFGHRTWDLTLYRADTRPLPKP*VFRLCN
Trigger: ATTGCAGAGTCTAAAAACCAATGGCTTTGGAAGGGG...CCTAGTGTCAGCTCTGTACAGGGTCAGATCCCAGGTTCTATGACCAAATAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp AGGTCCCTCATTAAAGAACTGCAGGTCATCCAGCACCCTAAAGTCTGCTTTATGCCCCTTCCAAAGCCATaGGTTTTTAGACTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: RSLIKELQVIQHPKVCFMPLPKP*VFRLCN
Trigger: ATTGCAGAGTCTAAAAACCAATGGCTTTGGAAGGGG...CATAAAGCAGACTTTAGGGTGCTGGATGACCTGCAGTTCTTTAATGAGGGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS-3UTR CAA 90 bp CCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGCATTTAGCACAGTCCTaGATTGAGTCATGGGGATTC +
Preference number: 5 (lower is better)
Translates to: PWIFNKILGTTVKLMELKHLAQS*IESWGF
Trigger: GAATCCCCATGACTCAATCAAGGACTGTGCTAAATG...CTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442241.9
ENST00000586869.5
CDS CCA 72 bp ACATCGCGCGCCACCGCCTCGTCCTGCGCGAGCAAGTaGGGCGGGAGTCAGTCTGGTCGCCCGCCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: TSRATASSCASK*GGSQSGRPPRR
Trigger: CCTTCTGGGCGGGCGACCAGACTGACTCCCGCCCCACTTGCTCGCGCAGGACGAGGCGGTGGCGCGCGATGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS GCA 72 bp AGCAACCGCTGCACATCGCGCGCCACCGCCTCGTCCTaGGCGAGCAAGTGGGGCGGGAGTCAGTCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: SNRCTSRATASS*ASKWGGSQSGR
Trigger: GCGACCAGACTGACTCCCGCCCCACTTGCTCGCGCAGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS GCA 72 bp TGCCCGCCCTCATCCTGGAACTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCCTCGTCCTGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: CPPSSWNCTSNR*TSRATASSCAS
Trigger: GCTCGCGCAGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586869.5
ENST00000593176.1
CDS GCA 72 bp TGCCCGCCCTCATCCTGGAACTGCACTAGCAACCGCTaGACATCGCGCGCCACCGCCTCGTCCGGCACTGCT +
Preference number: 6 (lower is better)
Translates to: CPPSSWNCTSNR*TSRATASSGTA
Trigger: AGCAGTGCCGGACGAGGCGGTGGCGCGCGATGTGCAGCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000588642.1
ENST00000589367.5
CDS GCA 72 bp GGATCCTCCTGGGCCAGTAGCGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATGTCCACGGGCACGTCG +
Preference number: 6 (lower is better)
Translates to: GSSWASSALHTS*SLSGVMSTGTS
Trigger: CGACGTGCCCGTGGACATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCCAGGAGGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000589367.5
ENST00000593176.1
CDS GCA 72 bp CCAGGTACCTGGGCCAGTAGCGCGTTGCACACGAGCTaGAGCCTGTCCGGGGTGATGTCCACGGGCACGTCG +
Preference number: 6 (lower is better)
Translates to: PGTWASSALHTS*SLSGVMSTGTS
Trigger: CGACGTGCCCGTGGACATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGCGCTACTGGCCCAGGTACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588642.1
CDS TCA 72 bp GTAGCGCGTTGCACACGAGCTGCAGCCTGTCCGGGGTaGTGTCCACGGGCACGTCGAACGGGGAACCCAGCA +
Preference number: 6 (lower is better)
Translates to: VARCTRAAACPG*CPRARRTGNPA
Trigger: TGCTGGGTTCCCCGTTCGACGTGCCCGTGGACATCACCCCGGACAGGCTGCAGCTCGTGTGCAACGCGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588642.1
ENST00000589367.5
ENST00000593176.1
CDS TCA 72 bp GTCACTGCTGCCGCTGACCAGGAGCCGACTGTCAGCTaGCCACGCAATCTGGTACACGGCAGCCACGTGGCC +
Preference number: 6 (lower is better)
Translates to: VTAAADQEPTVS*PRNLVHGSHVA
Trigger: GGCCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTCCTGGTCAGCGGCAGCAGTGAC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS GCA 72 bp ATGTCCACGGGCACGTCGAACGGGGAACCCAGCAGCTaGCCGCCCTCATCCTGGAACTGCACTAGCAACCGC +
Preference number: 6 (lower is better)
Translates to: MSTGTSNGEPSS*PPSSWNCTSNR
Trigger: GCGGTTGCTAGTGCAGTTCCAGGATGAGGGCGGGCAGCTGCTGGGTTCCCCGTTCGACGTGCCCGTGGACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588642.1
ENST00000589367.5
ENST00000593176.1
CDS CCA 72 bp CTGACCAGGAGCCGACTGTCAGCTGACCACGCAATCTaGTACACGGCAGCCACGTGGCCGCGTAGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: LTRSRLSADHAI*YTAATWPRREA
Trigger: GGCTTCCCTACGCGGCCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGCTGACAGTCGGCTCCTGGTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CCA 72 bp TGGCAGGGAAGGCAGCTGGCAGAGGCCGAGTCGAGGTaGGGGTCAGAGAGAACTTCGGGCCGTCTCATCTCC +
Preference number: 6 (lower is better)
Translates to: WQGRQLAEAESR*GSERTSGRLIS
Trigger: GGAGATGAGACGGCCCGAAGTTCTCTCTGACCCCCACCTCGACTCGGCCTCTGCCAGCTGCCTTCCCTGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CCA 72 bp TCAGCTGACCACGCAATCTGGTACACGGCAGCCACGTaGCCGCGTAGGGAAGCCAGGTACTTGCCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: SADHAIWYTAAT*PRREARYLPVL
Trigger: CAGGACGGGCAAGTACCTGGCTTCCCTACGCGGCCACGTGGCTGCCGTGTACCAGATTGCGTGGTCAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS GCA 72 bp TTGTGTCCCAGATCCGCACACTGCCATCCTTGGAGCTaGTGGCCACATAGCGGCACTCAGGGTTCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LCPRSAHCHPWS*WPHSGTQGSWP
Trigger: TGGCCAGGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593176.1
CDS CCA 72 bp TGTCCCAGATCCGCACACTGCCATCCTTGGAGCTGCTaGCCACATAGCGGCACTCAGGGTTCCTGGCCATTC +
Preference number: 6 (lower is better)
Translates to: CPRSAHCHPWSC*PHSGTQGSWPF
Trigger: GAATGGCCAGGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593176.1
CDS CCA 72 bp CTGCAGTTGTGTCCCAGATCCGCACACTGCCATCCTTaGAGCTGCTGGCCACATAGCGGCACTCAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: LQLCPRSAHCHP*SCWPHSGTQGS
Trigger: GGAACCCTGAGTGCCGCTATGTGGCCAGCAGCTCCAAGGATGGCAGTGTGCGGATCTGGGACACAACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593176.1
CDS CAA 90 bp CCGCGTAGGGAAGCCAGGTACTTGCCCGTCCTGCCATCCCACAGCTaGATGGACTTGTCAAAGGAGGCACTAGCCACGATGCGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: PRREARYLPVLPSHS*MDLSKEALATMRES
Trigger: TGACTCCCGCATCGTGGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCAGGACGGGCAAGTACCTGGCTTCCCTACGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS TCA 72 bp CATCCCACACCTTCAGTGTGCTGTCACTGCTGCCGCTaGCCAGGAGCCGACTGTCAGCTGACCACGCAATCT +
Preference number: 6 (lower is better)
Translates to: HPTPSVCCHCCR*PGADCQLTTQS
Trigger: AGATTGCGTGGTCAGCTGACAGTCGGCTCCTGGTCAGCGGCAGCAGTGACAGCACACTGAAGGTGTGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CAA 90 bp GAAGCCAGGTACTTGCCCGTCCTGCCATCCCACAGCTTGATGGACTaGTCAAAGGAGGCACTAGCCACGATGCGGGAGTCAGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: EARYLPVLPSHSLMD*SKEALATMRESGEK
Trigger: CTTCTCTCCTGACTCCCGCATCGTGGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCAGGACGGGCAAGTACCTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS TCA 72 bp GCTGCACTCGAGCCACTTGAACACCAGGTGACAGAGTaGAAGTCATCTTTGCCCGTCCTGCCATCCCACAGC +
Preference number: 6 (lower is better)
Translates to: AALEPLEHQVTE*KSSLPVLPSHS
Trigger: GCTGTGGGATGGCAGGACGGGCAAAGATGACTTTCACTCTGTCACCTGGTGTTCAAGTGGCTCGAGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS GCA 72 bp CCTCCATATCCGGAGGCATTTGTCCTTCCCACCACTTaGCACTCTCTGGCCATCTGGACTCCAGTCAACAGC +
Preference number: 6 (lower is better)
Translates to: PPYPEAFVLPTT*HSLAIWTPVNS
Trigger: GCTGTTGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CCA 72 bp AACGTCTTCCCCAGTGAGGAGACGATCTCAGCATCGTaGACAAAGAAAGCCAGTGGCAGGGGATCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: NVFPSEETISAS*TKKASGRGSSW
Trigger: CCAGGAGGATCCCCTGCCACTGGCTTTCTTTGTCCACGATGCTGAGATCGTCTCCTCACTGGGGAAGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000589367.5
ENST00000593176.1
CDS CAA 72 bp GCCACGATGCGGGAGTCAGGAGAGAAGAGCACCTGGTaGATGAGAGCTTGGTGTCCTGTCATCCGAGTGAGA +
Preference number: 6 (lower is better)
Translates to: ATMRESGEKSTW*MRAWCPVIRVR
Trigger: TCTCACTCGGATGACAGGACACCAAGCTCTCATCAACCAGGTGCTCTTCTCTCCTGACTCCCGCATCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CAA 72 bp TACTTGCCCGTCCTGCCATCCCACAGCTTGATGGACTaGTCAAAGGAGGCACTAGCCACGATGCGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: YLPVLPSHSLMD*SKEALATMRES
Trigger: TGACTCCCGCATCGTGGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCAGGACGGGCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
CDS CAA 72 bp TCTTTGCCCGTCCTGCCATCCCACAGCTTGATGGACTaGTCAAAGGAGGCACTAGCCACGATGCGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: SLPVLPSHSLMD*SKEALATMRES
Trigger: TGACTCCCGCATCGTGGCTAGTGCCTCCTTTGACAAGTCCATCAAGCTGTGGGATGGCAGGACGGGCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS CAA 90 bp GAGGCACTAGCCACGATGCGGGAGTCAGGAGAGAAGAGCACCTGGTaGATGAGAGCTTGGTGTCCTGTCATCCGAGTGAGAGGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: EALATMRESGEKSTW*MRAWCPVIRVRGFL
Trigger: CAAAAAGCCTCTCACTCGGATGACAGGACACCAAGCTCTCATCAACCAGGTGCTCTTCTCTCCTGACTCCCGCATCGTGGCTAGTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS TCA 72 bp TGTCTCCACTGCCTGGGACTCCAACGTCTTCCCCAGTaGGGAGACGATCTCAGCATCGTGGACAAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: CLHCLGLQRLPQ*GDDLSIVDKES
Trigger: GCTTTCTTTGTCCACGATGCTGAGATCGTCTCCTCACTGGGGAAGACGTTGGAGTCCCAGGCAGTGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000589367.5
ENST00000593176.1
CDS CAA 72 bp TCCTCCATATCCGGAGGCATTTGTCCTTCCCACCACTaGCCACTCTCTGGCCATCTGGACTCCAGTCAACAG +
Preference number: 6 (lower is better)
Translates to: SSISGGICPSHH*PLSGHLDSSQQ
Trigger: CTGTTGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CCA 72 bp CTCTCCTTCAACTCCTGCAAGGATCCTTGGAGGTCTTaGGGATTAACTGAGGCCTCAGCAGGTTCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: LSFNSCKDPWRS*GLTEASAGSKA
Trigger: GGCCTTTGAACCTGCTGAGGCCTCAGTTAATCCCCAAGACCTCCAAGGATCCTTGCAGGAGTTGAAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CCA 72 bp TTTGTCCTTCCCACCACTTGCCACTCTCTGGCCATCTaGACTCCAGTCAACAGCATATACCTCATCCGCGTG +
Preference number: 6 (lower is better)
Translates to: FVLPTTCHSLAI*TPVNSIYLIRV
Trigger: CACGCGGATGAGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CAA 90 bp TGGTTGATGAGAGCTTGGTGTCCTGTCATCCGAGTGAGAGGCTTTTaGTCCTCTGCTGGGGACCACAGGAATAAGGTGAAGTCGTCGGAG +
Preference number: 6 (lower is better)
Translates to: WLMRAWCPVIRVRGF*SSAGDHRNKVKSSE
Trigger: CTCCGACGACTTCACCTTATTCCTGTGGTCCCCAGCAGAGGACAAAAAGCCTCTCACTCGGATGACAGGACACCAAGCTCTCATCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS CAA 90 bp CGTCTCATCTCCTCCATATCCGGAGGCATTTGTCCTTCCCACCACTaGCCACTCTCTGGCCATCTGGACTCCAGTCAACAGCATATACCT +
Preference number: 6 (lower is better)
Translates to: RLISSISGGICPSHH*PLSGHLDSSQQHIP
Trigger: AGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGTGGTGGGAAGGACAAATGCCTCCGGATATGGAGGAGATGAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1
CDS TCA 72 bp AATGAGCCAAGATCGTGCCGCTGCACTCGAGCCACTTaGACACCAGGTGACAGAGTGAAAGTCATCTTTGCC +
Preference number: 6 (lower is better)
Translates to: NEPRSCRCTRAT*TPGDRVKVIFA
Trigger: GGCAAAGATGACTTTCACTCTGTCACCTGGTGTTCAAGTGGCTCGAGTGCAGCGGCACGATCTTGGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588019.1
CDS CAA 72 bp AGAGCTTGGTGTCCTGTCATCCGAGTGAGAGGCTTTTaGTCCTCTGCTGGGGACCACAGGAATAAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: RAWCPVIRVRGF*SSAGDHRNKVK
Trigger: CTTCACCTTATTCCTGTGGTCCCCAGCAGAGGACAAAAAGCCTCTCACTCGGATGACAGGACACCAAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360831.9
ENST00000442241.9
ENST00000586869.5
ENST00000588019.1