Pregenerated sensors for NKX1-2 (Homo sapiens)
Ensembl gene IDs: ENSG00000229544Ensembl transcript IDs: ENST00000451024.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGCCCGCGAGGATCGCGGGTGCGCGCGGCGGGCAGGGGTGCGCTaGCACCCGCGCACCTGCACCCCCGGTGGAGGAGCCGAGGGCACA | + |
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Preference number: 1 (lower is better) Translates to: VAREDRGCARRAGVR*HPRTCTPGGGAEGT Trigger: TGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGTGCGCGGGTGTCAGCGCACCCCTGCCCGCCGCGCGCACCCGCGATCCTCGCGGGCCAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 90 bp | GCGGCGGGCAGGGGTGCGCTGACACCCGCGCACCTGCACCCCCGGTaGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGAATCC | + |
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Preference number: 1 (lower is better) Translates to: AAGRGALTPAHLHPR*RSRGHTTMPIPRES Trigger: GGATTCACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGTGCGCGGGTGTCAGCGCACCCCTGCCCGCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR GCA 90 bp | AAAGGTTCCATCCTAGCCGCCAGCAGCTGGCAGCCAGGGCGTCTCTaGTCCCTGTATTTCCCTCCTGGCATCTTGGTTAGCCCCGCGCCG | + |
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Preference number: 1 (lower is better) Translates to: KGSILAASSWQPGRL*SLYFPPGILVSPAP Trigger: CGGCGCGGGGCTAACCAAGATGCCAGGAGGGAAATACAGGGAGCAGAGACGCCCTGGCTGCCAGCTGCTGGCGGCTAGGATGGAACCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 90 bp | GGCAGCCAGGGCGTCTCTGCTCCCTGTATTTCCCTCCTGGCATCTTaGTTAGCCCCGCGCCGAACACCCAGACCCTCAAAAACTAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GSQGVSAPCISLLAS*LAPRRTPRPSKTSP Trigger: GGGGCTAGTTTTTGAGGGTCTGGGTGTTCGGCGCGGGGCTAACCAAGATGCCAGGAGGGAAATACAGGGAGCAGAGACGCCCTGGCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 90 bp | GGACCAAGCTCTCCCCAGCCTCGTTCAGGATTTGGAAGAACTCTCTaGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: GPSSPQPRSGFGRTL*VWAEPSSTRRGSCQ Trigger: CTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGTTCTTCCAAATCCTGAACGAGGCTGGGGAGAGCTTGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 90 bp | TGGCCTACTCCAAAAACCAAGGTACCCCCTCTCTCAGGAATAGCCTaGGGAGGTTATTTGGAACAAGTATTGTGTTCCAGTCCGAATCTT | + |
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Preference number: 1 (lower is better) Translates to: WPTPKTKVPPLSGIA*GGYLEQVLCSSPNL Trigger: AAGATTCGGACTGGAACACAATACTTGTTCCAAATAACCTCCCCAGGCTATTCCTGAGAGAGGGGGTACCTTGGTTTTTGGAGTAGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR TCA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTCGGGCAGGGGTGCGCTaGCACCCGCGCACCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSRAGVR*HPRTCT Trigger: GGTGCAGGTGCGCGGGTGTCAGCGCACCCCTGCCCG...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCTGGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAGTTGAGGACGGCAGATCCCTaGCCCCTTGGTGGCCCGCGA | + |
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Preference number: 2 (lower is better) Translates to: TLWVWAEPSSTRRGSCQLRTADP*PLGGPR Trigger: TCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCT...CAACTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR CCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCCACCTGCACCCCCGGTaGAGGAGCCGAGGGCACACG | + |
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Preference number: 2 (lower is better) Translates to: CILKIVRFRAAVCAPGPSHLHPR*RSRGHT Trigger: CGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGTG...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR CCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCTCCCTGACCCCTTGGTaGCCCGCGAGGATCGCGGGT | + |
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Preference number: 2 (lower is better) Translates to: CILKIVRFRAAVCAPGPSSLTPW*PARIAG Trigger: ACCCGCGATCCTCGCGGGCCACCAAGGGGTCAGGGA...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTTCCCTCCTGGCATCTTaGTTAGCCCCGCGCCGAACA | + |
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Preference number: 2 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSSLLAS*LAPRRT Trigger: TGTTCGGCGCGGGGCTAACCAAGATGCCAGGAGGGA...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTGAGGGCACACGACGATaGCAATCCCTCGTGAATCCC | + |
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Preference number: 2 (lower is better) Translates to: TELNLTQSEQQGPETARLEGTRR*QSLVNP Trigger: GGGATTCACGAGGGATTGGCATCGTCGTGTGCCCTC...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR CCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCAGAACTCTCTGGGTTTaGGCTGAACCATCGAGCACG | + |
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Preference number: 2 (lower is better) Translates to: CILKIVRFRAAVCAPGPSRTLWV*AEPSST Trigger: CGTGCTCGATGGTTCAGCCCAAACCCAGAGAGTTCT...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 72 bp | CCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTaGTGGCCCGCGAGGATCGCGGGTGCGCGCGGCGGG | + |
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Preference number: 3 (lower is better) Translates to: PDTLKDGRSLTP*WPARIAGARGG Trigger: CCCGCCGCGCGCACCCGCGATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 72 bp | AGGGGTGCGCTGACACCCGCGCACCTGCACCCCCGGTaGAGGAGCCGAGGGCACACGACGATGCCAATCCCT | + |
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Preference number: 3 (lower is better) Translates to: RGALTPAHLHPR*RSRGHTTMPIP Trigger: AGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGTGCGCGGGTGTCAGCGCACCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 72 bp | GACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTaGCCCGCGAGGATCGCGGGTGCGCGCGGCGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: DTLKDGRSLTPW*PARIAGARGGQ Trigger: CTGCCCGCCGCGCGCACCCGCGATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR TCA 72 bp | GAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTaGATCCCGCGAAAGAGGGGCCAGGGGGCTCCGGAT | + |
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Preference number: 3 (lower is better) Translates to: EEPRAHDDANPS*IPRKRGQGAPD Trigger: ATCCGGAGCCCCCTGGCCCCTCTTTCGCGGGATTCACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR GCA 72 bp | TGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATaGCAATCCCTCGTGAATCCCGCGAAAGAGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: CTPGGGAEGTRR*QSLVNPAKEGP Trigger: TGGCCCCTCTTTCGCGGGATTCACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR GCA 72 bp | ATCCTAGCCGCCAGCAGCTGGCAGCCAGGGCGTCTCTaGTCCCTGTATTTCCCTCCTGGCATCTTGGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: ILAASSWQPGRL*SLYFPPGILVS Trigger: GCTAACCAAGATGCCAGGAGGGAAATACAGGGAGCAGAGACGCCCTGGCTGCCAGCTGCTGGCGGCTAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 72 bp | GGCGTCTCTGCTCCCTGTATTTCCCTCCTGGCATCTTaGTTAGCCCCGCGCCGAACACCCAGACCCTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: GVSAPCISLLAS*LAPRRTPRPSK Trigger: TTTTGAGGGTCTGGGTGTTCGGCGCGGGGCTAACCAAGATGCCAGGAGGGAAATACAGGGAGCAGAGACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR CAA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTCAGAAACGGCAAGGCTaGAGGTCAGCCTCCGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSQKRQG*RSASVP Trigger: GGGGACGGAGGCTGACCTCAAGCCTTGCCGTTTCTG...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 72 bp | TCTCCCCAGCCTCGTTCAGGATTTGGAAGAACTCTCTaGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SPQPRSGFGRTL*VWAEPSSTRRG Trigger: TCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGTTCTTCCAAATCCTGAACGAGGCTGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR CAA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTCAGATCCCTGACCCCTaGGTGGCCCGCGAGGATCGC | + |
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Preference number: 3 (lower is better) Translates to: TELNLTQSEQQGPETARLQIPDP*VAREDR Trigger: GCGATCCTCGCGGGCCACCAAGGGGTCAGGGATCTG...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CCA 72 bp | CAGCCTCGTTCAGGATTTGGAAGAACTCTCTGGGTTTaGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: QPRSGFGRTLWV*AEPSSTRRGSC Trigger: ACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGTTCTTCCAAATCCTGAACGAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR-3UTR CAA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTCCGTCCCCGGACACTTaGAAGGACGGCAGATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: TELNLTQSEQQGPETARLPSPDT*KDGRSL Trigger: CAGGGATCTGCCGTCCTTCAAAGTGTCCGGGGACGG...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR TCA 72 bp | CCGCGCCGAACACCCAGACCCTCAAAAACTAGCCCCTaGACTGAATTAAACCTGACCCAAAGTGAACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: PRRTPRPSKTSP*TELNLTQSEQQ Trigger: TTGCTGTTCACTTTGGGTCAGGTTTAATTCAGTTCAGGGGCTAGTTTTTGAGGGTCTGGGTGTTCGGCGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGGCGCGGGGTTGGGGATaGCGCCGCTCGGGCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVARGWG*RRSGLP Trigger: AGGCAAGCCCGAGCGGCGCCATCCCCAACCCCGCGC...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGCCCGCCGTCCTGCCATaGCAGCATGCCCGTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVPAVLP*QHARRP Trigger: TGGGCGACGGGCATGCTGGCATGGCAGGACGGCGGG...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATCTCCCCAGACGCCAATaGCCCGGCCGGGGCGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDLPRRQ*PGRGVR Trigger: CCTGACGCCCCGGCCGGGGCATTGGCGTCTGGGGAG...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGGGAGCGCTGCGCGGGTaGATTTCTGTGGGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVGALRG*ISVGPG Trigger: TCCTGGACCCACAGAAATTCACCCGCGCAGCGCTCC...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATAGGACGGCAGATCCCTaGCCCCTTGGTGGCCCGCGA | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDRTADP*PLGGPR Trigger: TCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCT...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGCAGAGCGGCCGTCTGTaGTCCAGGACCAAGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVQSGRL*SRTKLS Trigger: GGAGAGCTTGGTCCTGGAGCACAGACGGCCGCTCTG...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGGTCGGACAGGGTCCCTaGAGCTGGCATCTTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVVGQGP*SWHLSP Trigger: CGGGGAAAGATGCCAGCTCCAGGGACCCTGTCCGAC...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGCAGGGTCCCTGGAGCTaGCATCTTTCCCCGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVQGPWS*HLSPLR Trigger: TCGAAGCGGGGAAAGATGCCAGCTCCAGGGACCCTG...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATAGATCCCTGACCCCTTaGTGGCCCGCGAGGATCGCG | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDRSLTP*WPARIA Trigger: CGCGATCCTCGCGGGCCACCAAGGGGTCAGGGATCT...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATACGGGAAGAGGACATTaGCCGCGGAGTAGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDTGRGH*PRSRRG Trigger: TCCCCTCCTACTCCGCGGCCAATGTCCTCTTCCCGT...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATTCTCTGGGTTTGGGCTaGACCATCGAGCACGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDSLGLG*TIEHEE Trigger: CTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGA...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACTCTCTGGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAGTTGTTGGCCCCGCCGTCCTaGCATGCCAGCATGCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: TLWVWAEPSSTRRGSCQLLAPPS*HASMPV Trigger: GACGGGCATGCTGGCATGGCAGGACGGCGGGGCCAA...CAACTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGGAGAAAGAAATCTTGTaGTGGGAGGGAGCCGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVEKEIL*WEGAAL Trigger: CAAGGCGGCTCCCTCCCACCACAAGATTTCTTTCTC...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCCGGGCAGGGGTGCGCTaGCACCCGCGCACCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSRAGVR*HPRTCT Trigger: GGTGCAGGTGCGCGGGTGTCAGCGCACCCCTGCCCG...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTGGCGCCGCTCGGGCTTaGCTTCGGCTGTGGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSGAARA*LRLWLG Trigger: GCCAAGCCACAGCCGAAGGCAAGCCCGAGCGGCGCC...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATAAAGAAATCTTGTGGTaGGAGGGAGCCGCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDKEILW*EGAALA Trigger: GGCCAAGGCGGCTCCCTCCCACCACAAGATTTCTTT...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTCACCTGCACCCCCGGTaGAGGAGCCGAGGGCACACG | + |
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Preference number: 4 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSHLHPR*RSRGHT Trigger: CGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGTG...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATACAACTGGGGACCTCTaGGTTTCTGAGACGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDTTGDL*VSETWA Trigger: AGCCCACGTCTCAGAAACCCAGAGGTCCCCAGTTGT...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| 3UTR CAA 72 bp | GGGCGTCTCTGCTCCCTGTATTTCCCTCCTGGCATCTaGGTTAGCCCCGCGCCGAACACCCAGACCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: GRLCSLYFPPGI*VSPAPNTQTLK Trigger: TTTGAGGGTCTGGGTGTTCGGCGCGGGGCTAACCAAGATGCCAGGAGGGAAATACAGGGAGCAGAGACGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACTCTCTGGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAGTTGCACGGCAGGGAGCGCTaGGCGGGTGAATTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLWVWAEPSSTRRGSCQLHGRER*AGEFLW Trigger: CCACAGAAATTCACCCGCGCAGCGCTCCCTGCCGTG...CAACTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGTTTGGAAGAACTCTCTaGGTTTGGGCTGAACCATCG | + |
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Preference number: 4 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVFGRTL*VWAEPS Trigger: CGATGGTTCAGCCCAAACCCAGAGAGTTCTTCCAAA...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTCCTGCCATGCCAGCATaGCCGTCGCCCACGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: TELNLTQSEQQGPETARLPAMPA*PSPTGR Trigger: CCGGCCCGTGGGCGACGGGCATGCTGGCATGGCAGG...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACTCTCTGGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAGTTGGAGGGCACACGACGATaGCAATCCCTCGTGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: TLWVWAEPSSTRRGSCQLEGTRR*QSLVNP Trigger: GGGATTCACGAGGGATTGGCATCGTCGTGTGCCCTC...CAACTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATAGAATGAAACATACATaGCACAACTGGGGACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDRMKHT*HNWGPL Trigger: CAGAGGTCCCCAGTTGTGTCATGTATGTTTCATTCT...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTAGTGCAGAGCGCCGGTaGCGGGAGGGCCAGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: TELNLTQSEQQGPETARLSAERR*REGQDC Trigger: GCAGTCCTGGCCCTCCCGGCACCGGCGCTCTGCACT...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACTCTCTGGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAGTTGGCGGGTGAATTTCTGTaGGTCCAGGATGTCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TLWVWAEPSSTRRGSCQLAGEFL*VQDVQD Trigger: GTCCTGGACATCCTGGACCCACAGAAATTCACCCGC...CAACTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCCCGCCAAACTTTTCCTaGCTTCCCGGGGAGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSPPNFS*LPGEPG Trigger: GCCCGGCTCCCCGGGAAGCCAGGAAAAGTTTGGCGG...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATCACACAGATCTCGGCTaGCCTCAAGTAATCAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PGHFEGRQIPDPLVAREDHTDLG*PQVIKS Trigger: ACTTTTGATTACTTGAGGCCAGCCGAGATCTGTGTG...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCAGAAACGGCAAGGCTTaGGGTCAGCCTCCGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSRNGKA*GQPPSP Trigger: CGGGGACGGAGGCTGACCTCAAGCCTTGCCGTTTCT...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCGGGAAAGTCTGGAAGTaGAGAGCGCCGGTGCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSGKVWK*RAPVPG Trigger: TCCCGGCACCGGCGCTCTGCACTTCCAGACTTTCCC...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTTCCCTGACCCCTTGGTaGCCCGCGAGGATCGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: TELNLTQSEQQGPETARLSLTPW*PARIAG Trigger: ACCCGCGATCCTCGCGGGCCACCAAGGGGTCAGGGA...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCGATGCCAATCCCTCGTaGATCCCGCGAAAGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSDANPS*IPRKRG Trigger: GCCCCTCTTTCGCGGGATTCACGAGGGATTGGCATC...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | ACTCTCTGGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAGTTGGGAAGCTGTCAGTTGTaGACAGAGACTGTTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TLWVWAEPSSTRRGSCQLGSCQL*TETVSH Trigger: GTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCC...CAACTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTAGAACTCTCTGGGTTTaGGCTGAACCATCGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSRTLWV*AEPSST Trigger: CGTGCTCGATGGTTCAGCCCAAACCCAGAGAGTTCT...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTTCCCTCCTGGCATCTTaGTTAGCCCCGCGCCGAACA | + |
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Preference number: 4 (lower is better) Translates to: TELNLTQSEQQGPETARLSLLAS*LAPRRT Trigger: TGTTCGGCGCGGGGCTAACCAAGATGCCAGGAGGGA...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTGGCCCTTACAATCTCTaGTTGTTCACCACCATAAAG | + |
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Preference number: 4 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSGPYNL*LFTTIK Trigger: CTTTATGGTGGTGAACAAGCAGAGATTGTAAGGGCC...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTTTCACACCCAAGTATTaGTTTCATGGGCCCTTACAA | + |
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Preference number: 4 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSFTPKY*FHGPLQ Trigger: TTGTAAGGGCCCATGAAAGCAATACTTGGGTGTGAA...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR TCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCTCAAAAACTAGCCCCTaGACTGAATTAAACCTGACC | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSSKTSP*TELNLT Trigger: GGTCAGGTTTAATTCAGTTCAGGGGCTAGTTTTTGA...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR GCA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTGCAGGTGAGTCTAGCTaGAAATCAGTCACCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TELNLTQSEQQGPETARLAGESS*KSVTFP Trigger: AGGAAAGGTGACTGATTTGCAGCTAGACTCACCTGC...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCCCTGGGGAGGTTATTTaGAACAAGTATTGTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSPGEVI*NKYCVP Trigger: TGGAACACAATACTTGTTCCAAATAACCTCCCCAGG...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CCA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCCAAGTATTGCTTTCATaGGCCCTTACAATCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CILKIVRFRAAVCAPGPSQVLLS*ALTISA Trigger: AGCAGAGATTGTAAGGGCCCATGAAAGCAATACTTG...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS CCA 90 bp | CCAGCATGCCCGTCGCCCACGGGCCGGCGGTCGGCGGCGCGGGGTTaGGGATGGCGCCGCTCGGGCTTGCCTTCGGCTGTGGCTTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: PACPSPTGRRSAARG*GWRRSGLPSAVAWR Trigger: CCGCCAAGCCACAGCCGAAGGCAAGCCCGAGCGGCGCCATCCCCAACCCCGCGCCGCCGACCGCCGGCCCGTGGGCGACGGGCATGCTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS GCA 90 bp | AATCTTGTGGTGGGAGGGAGCCGCCTTGGCCCCGCCGTCCTGCCATaGCAGCATGCCCGTCGCCCACGGGCCGGCGGTCGGCGGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: NLVVGGSRLGPAVLP*QHARRPRAGGRRRG Trigger: CCCGCGCCGCCGACCGCCGGCCCGTGGGCGACGGGCATGCTGGCATGGCAGGACGGCGGGGCCAAGGCGGCTCCCTCCCACCACAAGATT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS GCA 90 bp | AAAGAAATCTTGTGGTGGGAGGGAGCCGCCTTGGCCCCGCCGTCCTaGCATGCCAGCATGCCCGTCGCCCACGGGCCGGCGGTCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: KEILWWEGAALAPPS*HASMPVAHGPAVGG Trigger: GCCGCCGACCGCCGGCCCGTGGGCGACGGGCATGCTGGCATGGCAGGACGGCGGGGCCAAGGCGGCTCCCTCCCACCACAAGATTTCTTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS CCA 90 bp | CGGCAGCCGTCAGCGGGAAGGAGGCGGCGGACGGGAAGAGGACATTaGCCGCGGAGTAGGAGGGGAAAGTCTGGAAGTGCAGAGCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RQPSAGRRRRTGRGH*PRSRRGKSGSAERR Trigger: CCGGCGCTCTGCACTTCCAGACTTTCCCCTCCTACTCCGCGGCCAATGTCCTCTTCCCGTCCGCCGCCTCCTTCCCGCTGACGGCTGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | ACCTGCACCCCCGGTGGAGGAGCCGAGGGCACACGACGATGCCAATCCCTCGTGCAGAAACGGCAAGGCTaGAGGTCAGCCTCCGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: TCTPGGGAEGTRRCQSLVQKRQG*RSASVP Trigger: GGGGACGGAGGCTGACCTCAAGCCTTGCCGTTTCTG...CACGAGGGATTGGCATCGTCGTGTGCCCTCGGCTCCTCCACCGGGGGTGCAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATCCGTCCCCGGACACTTaGAAGGACGGCAGATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGHFEGRQIPDPLVAREDPSPDT*KDGRSL Trigger: CAGGGATCTGCCGTCCTTCAAAGTGTCCGGGGACGG...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS CCA 90 bp | GGGAGCCGGGCGCACGGCAGGGAGCGCTGCGCGGGTGAATTTCTGTaGGTCCAGGATGTCCAGGACAGAGAAAGAAATCTTGTGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: GSRAHGRERCAGEFL*VQDVQDRERNLVVG Trigger: TCCCACCACAAGATTTCTTTCTCTGTCCTGGACATCCTGGACCCACAGAAATTCACCCGCGCAGCGCTCCCTGCCGTGCGCCCGGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTTGGCGCCGCTCGGGCTaGCCTTCGGCTGTGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSWRRSG*PSAVAW Trigger: CCAAGCCACAGCCGAAGGCAAGCCCGAGCGGCGCCA...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | ACTCTCTGGGTTTGGGCTGAACCATCGAGCACGAGGAGGGGAAGCTGTCAGTTGTTCCCTCCTGGCATCTaGGTTAGCCCCGCGCCGAAC | + |
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Preference number: 5 (lower is better) Translates to: TLWVWAEPSSTRRGSCQLFPPGI*VSPAPN Trigger: GTTCGGCGCGGGGCTAACCAAGATGCCAGGAGGGAA...CAACTGACAGCTTCCCCTCCTCGTGCTCGATGGTTCAGCCCAAACCCAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | CCCGGACACTTTGAAGGACGGCAGATCCCTGACCCCTTGGTGGCCCGCGAGGATAGCCTCGTTCAGGATTaGGAAGAACTCTCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGHFEGRQIPDPLVAREDSLVQD*EELSGF Trigger: AAACCCAGAGAGTTCTTCCAAATCCTGAACGAGGCT...ATCCTCGCGGGCCACCAAGGGGTCAGGGATCTGCCGTCCTTCAAAGTGTCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | ACTGAATTAAACCTGACCCAAAGTGAACAGCAAGGTCCAGAAACGGCAAGGCTTCGCGTGGCCCGGAACTaGTTCTCCAAGGCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TELNLTQSEQQGPETARLRVARN*FSKATS Trigger: GCTGGTGGCCTTGGAGAACAAGTTCCGGGCCACGCG...AAGCCTTGCCGTTTCTGGACCTTGCTGTTCACTTTGGGTCAGGTTTAATTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | GAGCACGAGGAGGGGAAGCTGTCAGTTGTGAACAGAGACTGTTTCTCACCCTCTGCCTGGGGAGGTTATTaGGAACAAGTATTGTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: EHEEGKLSVVNRDCFSPSAWGGY*EQVLCS Trigger: GGAACACAATACTTGTTCCAAATAACCTCCCCAGGC...AGAGGGTGAGAAACAGTCTCTGTTCACAACTGACAGCTTCCCCTCCTCGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS-3UTR CAA 90 bp | TGCATTTTAAAAATAGTCCGTTTCAGAGCGGCCGTCTGTGCTCCAGGACCAAGCCTTCACACCCAAGTATaGCTTTCATGGGCCCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: CILKIVRFRAAVCAPGPSLHTQV*LSWALT Trigger: TGTAAGGGCCCATGAAAGCAATACTTGGGTGTGAAG...GCTTGGTCCTGGAGCACAGACGGCCGCTCTGAAACGGACTATTTTTAAAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS GCA 72 bp | TTGTGGTGGGAGGGAGCCGCCTTGGCCCCGCCGTCCTaGCATGCCAGCATGCCCGTCGCCCACGGGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LWWEGAALAPPS*HASMPVAHGPA Trigger: CGCCGGCCCGTGGGCGACGGGCATGCTGGCATGGCAGGACGGCGGGGCCAAGGCGGCTCCCTCCCACCACAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS TCA 72 bp | GGGGAGCCGGGCGCACGGCAGGGAGCGCTGCGCGGGTaGATTTCTGTGGGTCCAGGATGTCCAGGACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GEPGARQGALRG*ISVGPGCPGQR Trigger: TCTCTGTCCTGGACATCCTGGACCCACAGAAATTCACCCGCGCAGCGCTCCCTGCCGTGCGCCCGGCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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| CDS CCA 72 bp | TCCAGGATGTCCAGGACAGAGAAAGAAATCTTGTGGTaGGAGGGAGCCGCCTTGGCCCCGCCGTCCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SRMSRTEKEILW*EGAALAPPSCH Trigger: ATGGCAGGACGGCGGGGCCAAGGCGGCTCCCTCCCACCACAAGATTTCTTTCTCTGTCCTGGACATCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451024.5 |
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