Pregenerated sensors for NKAP (Homo sapiens)
Ensembl gene IDs: ENSG00000101882Ensembl transcript IDs: ENST00000371410.5, ENST00000477789.5, ENST00000482407.1, ENST00000652253.1
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACTGGGCATGCTGCCTTCCACAATACACCACTATACTCATGATTaGAGGAGGGTGGCTTGGGGACTAGGGGCAATGACACGGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: KLGMLPSTIHHYTHD*RRVAWGLGAMTREG Trigger: TCCTTCCCGTGTCATTGCCCCTAGTCCCCAAGCCACCCTCCTGCAATCATGAGTATAGTGGTGTATTGTGGAAGGCAGCATGCCCAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR CCA 90 bp | CCTTCCACAATACACCACTATACTCATGATTGCAGGAGGGTGGCTTaGGGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: PSTIHHYTHDCRRVA*GLGAMTREGYNHCP Trigger: AGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCCCCAAGCCACCCTCCTGCAATCATGAGTATAGTGGTGTATTGTGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR TCA 90 bp | CTTCCCATCCTCACACTGAATAATCACTTGTTCCTACCTTCCCTGTaGACCTCTCTTGCCTGGCTGCAAAATTTTAAGACACCAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: LPILTLNNHLFLPSL*TSLAWLQNFKTPKT Trigger: TGTCTTTGGTGTCTTAAAATTTTGCAGCCAGGCAAGAGAGGTTCACAGGGAAGGTAGGAACAAGTGATTATTCAGTGTGAGGATGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR TCA 90 bp | AATCATTGCCCTTACTTATCTTTGATCTTCTTCCCATCCTCACACTaGATAATCACTTGTTCCTACCTTCCCTGTGAACCTCTCTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: NHCPYLSLIFFPSSH*IITCSYLPCEPLLP Trigger: AGGCAAGAGAGGTTCACAGGGAAGGTAGGAACAAGTGATTATTCAGTGTGAGGATGGGAAGAAGATCAAAGATAAGTAAGGGCAATGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR TCA 90 bp | AGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTTTTTGTGCTGGTCTCGACTCCTaGCCTCAGGTGATCCACCCG | + |
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Preference number: 2 (lower is better) Translates to: STVSWCEIEVSHLTNTFCAGLDS*PQVIHP Trigger: CGGGTGGATCACCTGAGGTCAGGAGTCGAGACCAGC...ACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGCAGGCCGGAGTGCAGTaGCTTGATCTCGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: IHFPFCNLHHISRVTSKLQAGVQ*LDLGSL Trigger: CAGTGAGCCGAGATCAAGCCACTGCACTCCGGCCTG...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGATGGTCTTGATCTCCTaGCCTCATGGTCCGCCCACC | + |
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Preference number: 2 (lower is better) Translates to: IHFPFCNLHHISRVTSKLMVLIS*PHGPPT Trigger: GGTGGGCGGACCATGAGGTCAGGAGATCAAGACCAT...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGGCTGAGGTGGAGGATTaGTTGAGCCCAGGAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IHFPFCNLHHISRVTSKLAEVED*LSPGGG Trigger: TCCACCTCCTGGGCTCAAGCAATCCTCCACCTCAGC...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGCCATGTTGGCCAGGCTaGTCTCGACTCCTGACCTCA | + |
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Preference number: 2 (lower is better) Translates to: IHFPFCNLHHISRVTSKLPCWPG*SRLLTS Trigger: TGAGGTCAGGAGTCGAGACCAGCCTGGCCAACATGG...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGTTCCTCTCGAGTAGCTaGGACTACAGGTGTGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: IHFPFCNLHHISRVTSKLFLSSS*DYRCAP Trigger: TGGCGCACACCTGTAGTCCCAGCTACTCGAGAGGAA...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGTTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: VASYMFLSSPFITHSTQRFKQFS*LSLPSS Trigger: ACTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCGCAGCAATGCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATTGCCCAGGCTGGAGTaGAATGTCACAATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: FRSNAFILLTKVASYMFLLPRLE*NVTISA Trigger: AGCCGAGATTGTGACATTGCACTCCAGCCTGGGCAA...TAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGGGATTGTTTGAGGTCTaGAGTTTGAGACCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: IHFPFCNLHHISRVTSKLGLFEV*SLRPAW Trigger: CCAGGCTGGTCTCAAACTCCAGACCTCAAACAATCC...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR GCA 90 bp | AGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTTTTTGTTTCAAGCAATTCTCCTaGCTCTTCCTCTCGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: STVSWCEIEVSHLTNTFCFKQFS*LFLSSS Trigger: GCTACTCGAGAGGAAGAGGCAGGAGAATTGCTTGAA...ACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR GCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGTTCAAATTCCAGATTTaGTTTTCGCAGCAATGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GLGAMTREGYNHCPYLSLFKFQI*FSQQCL Trigger: AAGGCATTGCTGCGAAAAGCAAATCTGGAATTTGAA...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR CAA 90 bp | TGTATCACTTCTGAGTCTTACAGGTATAGAGCTGAGTTTAGAGAGTaGCTAAAATTCACCTATTGGACCAAACTAAGGTTGGTACTTGGC | + |
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Preference number: 2 (lower is better) Translates to: CITSESYRYRAEFRE*LKFTYWTKLRLVLG Trigger: GCCAAGTACCAACCTTAGTTTGGTCCAATAGGTGAATTTTAGCAACTCTCTAAACTCAGCTCTATACCTGTAAGACTCAGAAGTGATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CCA 90 bp | AGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTTTTTGTGCCCAGCCCATAATTTaGATTTTTAAACCAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: STVSWCEIEVSHLTNTFCAQPII*IFKPES Trigger: ACTTTCTGGTTTAAAAATCCAAATTATGGGCTGGGC...ACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTAGTAGCACTGTCTCATaGTGTGAGATTGAAGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: AFILLTKVASYMFLSSPFSSTVS*CEIEVS Trigger: AGAAACTTCAATCTCACACCATGAGACAGTGCTACT...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CAA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGGCGGATCACCTGGGGTaGGGAGTTCGAGACCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GLGAMTREGYNHCPYLSLADHLG*GVRDQP Trigger: AGGCTGGTCTCGAACTCCCAACCCCAGGTGATCCGC...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR GCA 72 bp | ATGCTGCCTTCCACAATACACCACTATACTCATGATTaGAGGAGGGTGGCTTGGGGACTAGGGGCAATGACA | + |
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Preference number: 3 (lower is better) Translates to: MLPSTIHHYTHD*RRVAWGLGAMT Trigger: TGTCATTGCCCCTAGTCCCCAAGCCACCCTCCTGCAATCATGAGTATAGTGGTGTATTGTGGAAGGCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGTTGCAGGAGGGTGGCTaGGGGACTAGGGGCAATGAC | + |
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Preference number: 3 (lower is better) Translates to: IHFPFCNLHHISRVTSKLLQEGG*GTRGND Trigger: GTCATTGCCCCTAGTCCCCAAGCCACCCTCCTGCAA...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR CCA 72 bp | AAAATTCACCTATTGGACCAAACTAAGGTTGGTACTTaGCTGTTTGTTCCCCATCTGAGCCTAAGTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: KIHLLDQTKVGT*LFVPHLSLSLQ Trigger: CTGGAGACTTAGGCTCAGATGGGGAACAAACAGCCAAGTACCAACCTTAGTTTGGTCCAATAGGTGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGCCCTGTGAACCTCTCTaGCCTGGCTGCAAAATTTTA | + |
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Preference number: 3 (lower is better) Translates to: IHFPFCNLHHISRVTSKLPCEPL*PGCKIL Trigger: TAAAATTTTGCAGCCAGGCAAGAGAGGTTCACAGGG...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR CCA 72 bp | CAGGCATCACATAGAGCTAATAGTAGCACTGTCTCATaGTGTGAGATTGAAGTTTCTCATCTCACTAACACT | + |
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Preference number: 3 (lower is better) Translates to: QASHRANSSTVS*CEIEVSHLTNT Trigger: AGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAGCTCTATGTGATGCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR CCA 72 bp | AGAGCTGAGTTTAGAGAGTTGCTAAAATTCACCTATTaGACCAAACTAAGGTTGGTACTTGGCTGTTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: RAEFRELLKFTY*TKLRLVLGCLF Trigger: GAACAAACAGCCAAGTACCAACCTTAGTTTGGTCCAATAGGTGAATTTTAGCAACTCTCTAAACTCAGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTTCTCATGGTGTGAGATaGAAGTTTCTCATCTCACTA | + |
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Preference number: 3 (lower is better) Translates to: AFILLTKVASYMFLSSPFSHGVR*KFLISL Trigger: TAGTGAGATGAGAAACTTCAATCTCACACCATGAGA...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR TCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGCCTATCCGGGCTGCGTaGGCCGGACACCGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GLGAMTREGYNHCPYLSLPIRAA*AGHRSH Trigger: ATGGCTCCGGTGTCCGGCTCACGCAGCCCGGATAGG...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGCCTCCCTATCCGGGCTaGGTGAGCCGGACACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRPPYPG*VSRTPE Trigger: CTCCGGTGTCCGGCTCACGCAGCCCGGATAGGGAGG...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACAGAAGCGAAGGGGATaGCCCGGGGCGCAGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTQKRRG*PGAQRA Trigger: GGCCCTCTGCGCCCCGGGGCATCCCCTTCGCTTCTG...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGCGGAGCCATGGCTACTaGGGGGCCCCAGCAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: IHFPFCNLHHISRVTSKLRSHGY*GAPAAV Trigger: CACGGCTGCTGGGGCCCCCCAGTAGCCATGGCTCCG...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACCCTCCCTATCCGGGCTaGGTGAGCCGGACACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNPPYPG*VSRTPE Trigger: CTCCGGTGTCCGGCTCACGCAGCCCGGATAGGGAGG...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS-3UTR GCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACAGACCGAGAGCAAGAGTaGGAGCGAGAGCGGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTDREQE*ERERRP Trigger: GGGCCGCCGCTCTCGCTCGCACTCTTGCTCTCGGTC...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR TCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGGCTGCCGTAATAGACTaGCGAGGAGGCAGAAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: GLGAMTREGYNHCPYLSLAAVID*RGGRSE Trigger: TTCGCTTCTGCCTCCTCGTCAGTCTATTACGGCAGC...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR TCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGGCTGGTCTCGACTCCTaGCCTCAGGTGATCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRAGLDS*PQVIHP Trigger: CGGGTGGATCACCTGAGGTCAGGAGTCGAGACCAGC...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR TCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGTTCCTACCTTCCCTGTaGACCTCTCTTGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLGAMTREGYNHCPYLSLFLPSL*TSLAWL Trigger: CAGCCAGGCAAGAGAGGTTCACAGGGAAGGTAGGAA...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATACAGAAGCGAAGGGGATaGCCCGGGGCGCAGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNIQKRRG*PGAQRA Trigger: GGCCCTCTGCGCCCCGGGGCATCCCCTTCGCTTCTG...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS-3UTR CCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACGGCGGGCGGATCACCTaGGGTTGGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNGGRIT*GWEFET Trigger: GGTCTCGAACTCCCAACCCCAGGTGATCCGCCCGCC...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGGGGAGCGGGCAGATTTaGTGGGCTTCGGACTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRGSGQI*WASDSS Trigger: CGAAGAGTCCGAAGCCCAGCAAATCTGCCCGCTCCC...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR TCA 90 bp | AGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTTTTTGTAGCTGCTCGGGAGGCTaGGGTGGAGGATTGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: STVSWCEIEVSHLTNTFCSCSGG*GGGLLE Trigger: CTCAAGCAATCCTCCACCTCAGCCTCCCGAGCAGCT...ACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACGGGAGCGGGCAGATTTaGTGGGCTTCGGACTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNGSGQI*WASDSS Trigger: CGAAGAGTCCGAAGCCCAGCAAATCTGCCCGCTCCC...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS-3UTR CCA 90 bp | TTTCGCAGCAATGCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTACAGGCCGGAGTGCAGTaGCTTGATCTCGGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: FRSNAFILLTKVASYMFLQAGVQ*LDLGSL Trigger: CAGTGAGCCGAGATCAAGCCACTGCACTCCGGCCTG...TAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR TCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACGGCGGGCGGATTGTTTaGGGTCTGGAGTTTGAGACC | + |
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Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNGGRIV*GLEFET Trigger: GGTCTCAAACTCCAGACCTCAAACAATCCGCCCGCC...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR TCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATGGTCTTGATCTCCTaGCCTCATGGTCCGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNMVLIS*PHGPPT Trigger: GGTGGGCGGACCATGAGGTCAGGAGATCAAGACCAT...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACAAGGGGCGCGAGTAGCTaGCGTAATAGACTGACGAGG | + |
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Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTRGASS*RNRLTR Trigger: CCTCGTCAGTCTATTACGGCAGCTACTCGCGCCCCT...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACGCTGAGGTGGAGGATTaGTTGAGCCCAGGAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNAEVED*LSPGGG Trigger: TCCACCTCCTGGGCTCAAGCAATCCTCCACCTCAGC...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CCA 90 bp | TTTCGCAGCAATGCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTAAGATGTCTGTTGCCTTaGTTCCCGGGACCTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: FRSNAFILLTKVASYMFLRCLLP*FPGPAA Trigger: AGCGGCAGGTCCCGGGAACCAAGGCAACAGACATCT...TAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACCCATGTTGGCCAGGCTaGTCTCGACTCCTGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNPCWPG*SRLLTS Trigger: TGAGGTCAGGAGTCGAGACCAGCCTGGCCAACATGG...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGTCCCAAAAGTTCAGCTaGGGTAGAGGTCGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHFPFCNLHHISRVTSKLSQKFS*GRGRGG Trigger: CCCACCCCGACCTCTACCCCAGCTGAACTTTTGGGA...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTCGGATCACCTGGGGTTaGGAGTTCGAGACCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFILLTKVASYMFLSSPFRITWG*EFETSL Trigger: CAGGCTGGTCTCGAACTCCCAACCCCAGGTGATCCG...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGTGCAGGAGGGTGGCTTaGGGACTAGGGGCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: IHFPFCNLHHISRVTSKLCRRVA*GLGAMT Trigger: TGTCATTGCCCCTAGTCCCCAAGCCACCCTCCTGCA...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACAGGCAGAGGTTACAGTaGGCCGAGATCACACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNRQRLQ*AEITPL Trigger: CAGTGGTGTGATCTCGGCTCACTGTAACCTCTGCCT...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGAGTAGTGCTTTTCTTTaGCTCTTCATCCTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGAMTREGYNHCPYLSLSSAFL*LFILHW Trigger: CCAGTGGAGGATGAAGAGCCAAAGAAAAGCACTACT...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATAAGGGGCGCGAGTAGCTaGCGTAATAGACTGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNIRGASS*RNRLTR Trigger: CCTCGTCAGTCTATTACGGCAGCTACTCGCGCCCCT...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR GCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACTCACTTAATCTCTTCTaGCGCAGGCTCTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNSLNLF*RRLSSL Trigger: GAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGA...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR GCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACAGCCTCCATTCGGCGATaGCTGCTACCACTCATTACA | + |
|
Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTASIRR*LLPLIT Trigger: TGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGC...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGCCATTTCTCGAAAACTaGCCAGAATCTTGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGAMTREGYNHCPYLSLPFLEN*PESCSL Trigger: GAGAGAACAAGATTCTGGCCAGTTTTCGAGAAATGG...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGGGATTGTTTGAGGTCTaGAGTTTGAGACCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRGLFEV*SLRPAW Trigger: CCAGGCTGGTCTCAAACTCCAGACCTCAAACAATCC...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACAGGAACAGCCCAAATCTaGGGAAACCTTGGACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTGTAQI*GNLGHS Trigger: ACTGTGTCCAAGGTTTCCTCAGATTTGGGCTGTTCC...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATAGCTGCCGTAATAGACTaGCGAGGAGGCAGAAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNIAAVID*RGGRSE Trigger: TTCGCTTCTGCCTCCTCGTCAGTCTATTACGGCAGC...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR TCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGGGATTCTTTAGAGCTTaGATCACTGGACTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGAMTREGYNHCPYLSLGFFRA*ITGLFS Trigger: AGAAAAGAGTCCAGTGATTCAAGCTCTAAAGAATCC...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACACACCACTATACTCATaGTTGCAGGAGGGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNTPLYS*LQEGGL Trigger: CAAGCCACCCTCCTGCAATCATGAGTATAGTGGTGT...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTGAGGCAGGAGAACTaGTTGAACTTAGGAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTLRQEN*LNLGGG Trigger: TCCACCTCCTAAGTTCAAGCAGTTCTCCTGCCTCAG...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGCACTATACTCATGATTaGAGGAGGGTGGCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IHFPFCNLHHISRVTSKLHYTHD*RRVAWG Trigger: TCCCCAAGCCACCCTCCTGCAATCATGAGTATAGTG...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGGAAAACTGGGCATGCTaGCTTCCACAATACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRENWAC*LPQYTT Trigger: AGTGGTGTATTGTGGAAGGCAGCATGCCCAGTTTTC...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGAGTAGCACTGTCTCATaGTGTGAGATTGAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGAMTREGYNHCPYLSLSSTVS*CEIEVS Trigger: AGAAACTTCAATCTCACACCATGAGACAGTGCTACT...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGGCCCTTACTTATCTTTaGTCTTCTTCCCATCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRALTYL*SSSHPH Trigger: GTGAGGATGGGAAGAAGATCAAAGATAAGTAAGGGC...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATATCACTTAATCTCTTCTaGCGCAGGCTCTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNISLNLF*RRLSSL Trigger: GAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGA...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATAGCCTCCATTCGGCGATaGCTGCTACCACTCATTACA | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNIASIRR*LLPLIT Trigger: TGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGC...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR GCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTTTCAAGCAATTCTCCTaGCTCTTCCTCTCGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFILLTKVASYMFLSSPFFKQFS*LFLSSS Trigger: GCTACTCGAGAGGAAGAGGCAGGAGAATTGCTTGAA...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGTGGTTCAGGATTCTTTaGAGAAAGTCCCCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRWFRIL*RKSPYF Trigger: GAAGTATGGGGACTTTCTCCAAAGAATCCTGAACCA...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACAGTAGTGCTTTTCTTTaGCTCTTCATCCTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNSSAFL*LFILHW Trigger: CCAGTGGAGGATGAAGAGCCAAAGAAAAGCACTACT...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR CCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACTTGAAACTGGAAAACTaGGCATGCTGCCTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNLKLEN*ACCLPQ Trigger: TTGTGGAAGGCAGCATGCCCAGTTTTCCAGTTTCAA...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTGACCCCTTCATTTACTaGGAGTTAAGCCTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFILLTKVASYMFLSSPFDPFIY*ELSLTA Trigger: AGCAGTGAGGCTTAACTCCCAGTAAATGAAGGGGTC...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACAACTAAGGTTGGTACTTaGCTGTTTGTTCCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTTKVGT*LFVPHL Trigger: CAGATGGGGAACAAACAGCCAAGTACCAACCTTAGT...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | AGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTTTTTGTCTTGGACCTTTCTTTTaGACGGCTAGACTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STVSWCEIEVSHLTNTFCLGPFF*TARLLL Trigger: AAGAAGAAGTCTAGCCGTTCAAAAGAAAGGTCCAAG...ACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATACCATTCGGCGATGCCTaGTACCACTCATTACATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNIPFGDA*YHSLHN Trigger: GTTATGTAATGAGTGGTAGCAGGCATCGCCGAATGG...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGAATCTGAGGAAACCTTaGACACAGTTCTGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: IHFPFCNLHHISRVTSKLNLRKP*TQFWVL Trigger: AAGTACCCAGAACTGTGTCCAAGGTTTCCTCAGATT...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACTGGTTCAGGATTCTTTaGAGAAAGTCCCCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNWFRIL*RKSPYF Trigger: GAAGTATGGGGACTTTCTCCAAAGAATCCTGAACCA...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGAGACACATCTCTTTATaGGCACAACTGGGAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: IHFPFCNLHHISRVTSKLRHISL*AQLGTT Trigger: TGTTGTTCCCAGTTGTGCCCATAAAGAGATGTGTCT...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACGGATTCTTTAGAGCTTaGATCACTGGACTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNGFFRA*ITGLFS Trigger: AGAAAAGAGTCCAGTGATTCAAGCTCTAAAGAATCC...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR TCA 90 bp | AGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTTTTTGTACTCTTGACCATAGTTaGCTCCTATTCTTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: STVSWCEIEVSHLTNTFCTLDHS*LLFFWM Trigger: CATCCAAAAGAATAGGAGTCAACTATGGTCAAGAGT...ACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGAATGCTGCTACATGCTaGCTCTTATTTTCAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VASYMFLSSPFITHSTQRNAATC*LLFSVV Trigger: AACTACTGAAAATAAGAGTCAGCATGTAGCAGCATT...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTCCTCTCTTGCCTGGCTaGAAAATTTTAAGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AFILLTKVASYMFLSSPFPLLPG*KILRHQ Trigger: TTGGTGTCTTAAAATTTTGCAGCCAGGCAAGAGAGG...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| 3UTR CAA 72 bp | TCTGAGTCTTACAGGTATAGAGCTGAGTTTAGAGAGTaGCTAAAATTCACCTATTGGACCAAACTAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SESYRYRAEFRE*LKFTYWTKLRL Trigger: CAACCTTAGTTTGGTCCAATAGGTGAATTTTAGCAACTCTCTAAACTCAGCTCTATACCTGTAAGACTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATATTCCCATCCTCACACTaGATAATCACTTGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNIFPSSH*IITCSY Trigger: GTAGGAACAAGTGATTATTCAGTGTGAGGATGGGAA...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATACCATTTCTCGAAAACTaGCCAGAATCTTGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNIPFLEN*PESCSL Trigger: GAGAGAACAAGATTCTGGCCAGTTTTCGAGAAATGG...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATACTTTATGGGCACAACTaGGAACAACAAAATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNILYGHN*EQQNGN Trigger: GTTGCCATTTTGTTGTTCCCAGTTGTGCCCATAAAG...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| 3UTR CAA 72 bp | AATTCCAGATTTGCTTTTCGCAGCAATGCCTTCATTTaGTTAACAAAAGTGGCCTCCTATATGTTCCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: NSRFAFRSNAFI*LTKVASYMFLS Trigger: TGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAAAGCAAATCTGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| 3UTR CAA 72 bp | GCCTCTTTCCCAAAGAATATGCCAATGAAGCTGTTCTaGATGTCACAATATTCATATATCGCAGAATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASFPKNMPMKLF*MSQYSYIAEFL Trigger: CAGAAATTCTGCGATATATGAATATTGTGACATCAAGAACAGCTTCATTGGCATATTCTTTGGGAAAGAGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
||
| CDS-3UTR GCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACTTTCTTGGCTTTCTTTaGTCTCCTTTTGTTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNFLGFL*SPFVIF Trigger: GAAGATAACAAAAGGAGAGCAAAGAAAGCCAAGAAA...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
||
| CDS-3UTR GCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACATGCTTTTCGCAGCAATaGCTTCATTTTGTTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTCFSQQ*LHFVNK Trigger: TTTGTTAACAAAATGAAGGCATTGCTGCGAAAAGCA...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTTTCAAATTCCAGATTTaGTTTTCGCAGCAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFILLTKVASYMFLSSPFFKFQI*FSQQCL Trigger: AAGGCATTGCTGCGAAAAGCAAATCTGGAATTTGAA...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTTGTTATCTTCATCACTaGAGTCTGTTTCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFILLTKVASYMFLSSPFCYLHH*SLFQNQ Trigger: CTGATTCTGAAACAGACTCCAGTGATGAAGATAACA...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CCA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATTCAGGGAAGTAGATaGATTGAGACTCAAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKELNRRHSSTVKLSQNIQGSR*IETQNF Trigger: AAAGTTTTGAGTCTCAATCCATCTACTTCCCTGAAT...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CCA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTAAAATTCACCTATTaGACCAAACTAAGGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIVALSHGVRLKFLISLTLKFTY*TKLRLV Trigger: TACCAACCTTAGTTTGGTCCAATAGGTGAATTTTAG...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR GCA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTTTTCTTGGCTTTCTTTaGTCTCCTTTTGTTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFILLTKVASYMFLSSPFFLGFL*SPFVIF Trigger: GAAGATAACAAAAGGAGAGCAAAGAAAGCCAAGAAA...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATATGTTATCTTCATCACTaGAGTCTGTTTCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKELNRRHSSTVKLSQNICYLHH*SLFQNQ Trigger: CTGATTCTGAAACAGACTCCAGTGATGAAGATAACA...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS CCA 90 bp | GGACAAGGGGGCGCTCTCGCGAGCCTAGGAAGATGTCTGTTGCCTTaGTTCCCGGGACCTGCCGCTGCGGAACAGCCCAAATCTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQGGALASLGRCLLP*FPGPAAAEQPKSEE Trigger: TTCCTCAGATTTGGGCTGTTCCGCAGCGGCAGGTCCCGGGAACCAAGGCAACAGACATCTTCCTAGGCTCGCGAGAGCGCCCCCTTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGAAGATGTCTGTTGCCTaGGTTCCCGGGACCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGAMTREGYNHCPYLSLKMSVA*VPGTCR Trigger: GCGGCAGGTCCCGGGAACCAAGGCAACAGACATCTT...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GTGGCCTCCTATATGTTCCTATCAAGTCCATTTATAACACATTCAACACAGAGGTTGCAGGAGGGTGGCTaGGGGACTAGGGGCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: VASYMFLSSPFITHSTQRLQEGG*GTRGND Trigger: GTCATTGCCCCTAGTCCCCAAGCCACCCTCCTGCAA...CCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACAGCCGAGATCACCCCATaGTACTCCAGCCTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LIVALSHGVRLKFLISLTAEITP*YSSLGN Trigger: GTTGCCCAGGCTGGAGTACAATGGGGTGATCTCGGC...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATAGCGGATCACCTGGGGTaGGGAGTTCGAGACCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKELNRRHSSTVKLSQNIADHLG*GVRDQP Trigger: AGGCTGGTCTCGAACTCCCAACCCCAGGTGATCCGC...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | TTTCGCAGCAATGCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTACTAGGAAGATGTCTGTaGCCTTGGTTCCCGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: FRSNAFILLTKVASYMFLLGRCL*PWFPGP Trigger: AGGTCCCGGGAACCAAGGCAACAGACATCTTCCTAG...TAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGCTGGTTCAGGATTCTTaGGAGAAAGTCCCCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: GLGAMTREGYNHCPYLSLLVQDS*EKVPIL Trigger: AAGTATGGGGACTTTCTCCAAAGAATCCTGAACCAG...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGTGGACCAAACTAAGGTaGGTACTTGGCTGTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLGAMTREGYNHCPYLSLWTKLR*VLGCLF Trigger: GAACAAACAGCCAAGTACCAACCTTAGTTTGGTCCA...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GGACTAGGGGCAATGACACGGGAAGGATACAATCATTGCCCTTACTTATCTTTGAGCAATGCCTTCATTTaGTTAACAAAAGTGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGAMTREGYNHCPYLSLSNAFI*LTKVAS Trigger: GGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCT...CAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS CCA 90 bp | TCAGCCTTTGTTCGATCCTTCCAGGGATTTTCCAGAAACTCTTCTTaGGATTCTTTAGAGCTTGAATCACTGGACTCTTTTCTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAFVRSFQGFSRNSS*DSLELESLDSFLLF Trigger: GAAGAGCAGAAAAGAGTCCAGTGATTCAAGCTCTAAAGAATCCCAAGAAGAGTTTCTGGAAAATCCCTGGAAGGATCGAACAAAGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000371410.5 ENST00000477789.5 ENST00000482407.1 ENST00000652253.1 |
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| CDS-3UTR CAA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACATTTGAGGTCTGGAGTTaGAGACCAGCCTGGGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LIVALSHGVRLKFLISLTFEVWS*RPAWAI Trigger: TATTGCCCAGGCTGGTCTCAAACTCCAGACCTCAAA...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | ATTCATTTTCCATTCTGCAACCTCCATCACATTAGCAGAGTAACCAGTAAGTTGATGGTTCTTCAGCCTTaGTTCGATCCTTCCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IHFPFCNLHHISRVTSKLMVLQP*FDPSRD Trigger: ATCCCTGGAAGGATCGAACAAAGGCTGAAGAACCAT...CAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATGGTTCTTCAGCCTTaGTTCGATCCTTCCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLKELNRRHSSTVKLSQNMVLQP*FDPSRD Trigger: ATCCCTGGAAGGATCGAACAAAGGCTGAAGAACCAT...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATAAGGCAGGAGAACTGCTaGAACTTAGGAGGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKELNRRHSSTVKLSQNIRQENC*NLGGGG Trigger: ACCTCCACCTCCTAAGTTCAAGCAGTTCTCCTGCCT...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTCCCTGTGAACCTCTCTaGCCTGGCTGCAAAATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AFILLTKVASYMFLSSPFPCEPL*PGCKIL Trigger: TAAAATTTTGCAGCCAGGCAAGAGAGGTTCACAGGG...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATACTGGTTCAGGATTCTTaGGAGAAAGTCCCCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: LKELNRRHSSTVKLSQNILVQDS*EKVPIL Trigger: AAGTATGGGGACTTTCTCCAAAGAATCCTGAACCAG...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS-3UTR CAA 90 bp | AGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACACTTTTTGTTTCTTTCTCCTTTTCTaGGACCTTTCTTTTGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: STVSWCEIEVSHLTNTFCFFLLF*DLSFER Trigger: CCGTTCAAAAGAAAGGTCCAAGAAAAGGAGAAAGAA...ACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | TTTCGCAGCAATGCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCTCATGGTGTGAGATaGAAGTTTCTCATCTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: FRSNAFILLTKVASYMFLSHGVR*KFLISL Trigger: TAGTGAGATGAGAAACTTCAATCTCACACCATGAGA...TAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACTTTCAAATTCCAGATTaGCTTTTCGCAGCAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLKELNRRHSSTVKLSQNFQIPD*LFAAMP Trigger: AGGCATTGCTGCGAAAAGCAAATCTGGAATTTGAAA...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | CTAATAGTAGCACTGTCTCATGGTGTGAGATTGAAGTTTCTCATCTCACTAACAGCTAAAATTCACCTATaGGACCAAACTAAGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LIVALSHGVRLKFLISLTAKIHL*DQTKVG Trigger: ACCAACCTTAGTTTGGTCCAATAGGTGAATTTTAGC...TGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | TTTCGCAGCAATGCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTAGCTGAGTTTAGAGAGTaGCTAAAATTCACCTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRSNAFILLTKVASYMFLAEFRE*LKFTYW Trigger: CCAATAGGTGAATTTTAGCAACTCTCTAAACTCAGC...TAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GGACTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACTCAGAAAATCTTTATTaGTCATCCTTCCCTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLKELNRRHSSTVKLSQNSENLY*SSFPLV Trigger: GACCAAAGGGAAGGATGACAAATAAAGATTTTCTGA...GTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS-3UTR CAA 90 bp | TTTCGCAGCAATGCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCCTTATCAAAACTCTaGACCATAGTTGACTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FRSNAFILLTKVASYMFLSLSKL*TIVDSY Trigger: ATAGGAGTCAACTATGGTCAAGAGTTTTGATAAGGA...TAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | GCCTTCATTTTGTTAACAAAAGTGGCCTCCTATATGTTCCTATCAAGTCCATTTTCAGAAAATCTTTATTaGTCATCCTTCCCTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFILLTKVASYMFLSSPFSENLY*SSFPLV Trigger: GACCAAAGGGAAGGATGACAAATAAAGATTTTCTGA...AAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAATTAAATAGAAGGCACAGTAGCACTGTAAAGCTTTCTCAGAACATAGGAAGGATACAATCATaGCCCTTACTTATCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LKELNRRHSSTVKLSQNIGRIQS*PLLIFD Trigger: ATCAAAGATAAGTAAGGGCAATGATTGTATCCTTCC...TATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS GCA 72 bp | AGCGAGAGCGGCGGCCCCGCGGGGAGCGGGCAGATTTaGTGGGCTTCGGACTCTTCGACGAACTGCGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: SESGGPAGSGQI*WASDSSTNCDV Trigger: GACGTCGCAGTTCGTCGAAGAGTCCGAAGCCCAGCAAATCTGCCCGCTCCCCGCGGGGCCGCCGCTCTCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS CAA 72 bp | CAAGGGGGCGCTCTCGCGAGCCTAGGAAGATGTCTGTaGCCTTGGTTCCCGGGACCTGCCGCTGCGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: QGGALASLGRCL*PWFPGPAAAEQ Trigger: CTGTTCCGCAGCGGCAGGTCCCGGGAACCAAGGCAACAGACATCTTCCTAGGCTCGCGAGAGCGCCCCCTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS CAA 90 bp | GCCGTGGGACAAGGGGGCGCTCTCGCGAGCCTAGGAAGATGTCTGTaGCCTTGGTTCCCGGGACCTGCCGCTGCGGAACAGCCCAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: AVGQGGALASLGRCL*PWFPGPAAAEQPKS Trigger: AGATTTGGGCTGTTCCGCAGCGGCAGGTCCCGGGAACCAAGGCAACAGACATCTTCCTAGGCTCGCGAGAGCGCCCCCTTGTCCCACGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371410.5 |
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| CDS GCA 72 bp | AATTCTCCAATTCTCTCTCTCTCACTTAATCTCTTCTaGCGCAGGCTCTCCTCCCTCTCCTTGTCGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSPILSLSLNLF*RRLSSLSLSRR Trigger: CCTCCTCGACAAGGAGAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGAGAGAGAGAGAATTGGAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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| CDS CAA 72 bp | CTGGTGTATGTTCATCAGAATCTGGTTCAGGATTCTTaGGAGAAAGTCCCCATACTTCAGGAGCTCCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: LVYVHQNLVQDS*EKVPILQELPI Trigger: AATTGGGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCTGAACCAGATTCTGATGAACATACACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371410.5 ENST00000652253.1 |
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