Pregenerated sensors for NGRN (Homo sapiens)

Ensembl gene IDs: ENSG00000182768

Ensembl transcript IDs: ENST00000331497.3

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CGTCCAGTTTTCAGTTGTCAGAATCCCTCACTAAGCAGGATGCTCTaGACAGAGCCCTTTGCTGGGAAATTCCTCTGGTTCCATCTCTCT	+
Preference number: 5 (lower is better) Translates to: RPVFSCQNPSLSRML*TEPFAGKFLWFHLS Trigger: AGAGAGATGGAACCAGAGGAATTTCCCAGCAAAGGGCTCTGTGCAGAGCATCCTGCTTAGTGAGGGATTCTGACAACTGAAAACTGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331497.3
CDS CCA 90 bp	AAAATTATGGCAGACAGTGCCATATTCCCGGAATTCCAGAAGCCCTaGATTAATGATGAGACCCGAGTTAAGTCCCAGCACTGCCACTTA	+
Preference number: 5 (lower is better) Translates to: KIMADSAIFPEFQKP*INDETRVKSQHCHL Trigger: TAAGTGGCAGTGCTGGGACTTAACTCGGGTCTCATCATTAATCCAGGGCTTCTGGAATTCCGGGAATATGGCACTGTCTGCCATAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331497.3
CDS CCA 72 bp	GCAGACAGTGCCATATTCCCGGAATTCCAGAAGCCCTaGATTAATGATGAGACCCGAGTTAAGTCCCAGCAC	+
Preference number: 6 (lower is better) Translates to: ADSAIFPEFQKP*INDETRVKSQH Trigger: GTGCTGGGACTTAACTCGGGTCTCATCATTAATCCAGGGCTTCTGGAATTCCGGGAATATGGCACTGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331497.3
CDS GCA 72 bp	TTCAGTTGTCAGAATCCCTCACTAAGCAGGATGCTCTaGACAGAGCCCTTTGCTGGGAAATTCCTCTGGTTC	+
Preference number: 6 (lower is better) Translates to: FSCQNPSLSRML*TEPFAGKFLWF Trigger: GAACCAGAGGAATTTCCCAGCAAAGGGCTCTGTGCAGAGCATCCTGCTTAGTGAGGGATTCTGACAACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331497.3
CDS GCA 72 bp	TGGATTAATGATGAGACCCGAGTTAAGTCCCAGCACTaGCACTTACTGGCAGCCATCTTAAAGTCTATTTCC	+
Preference number: 6 (lower is better) Translates to: WINDETRVKSQH*HLLAAILKSIS Trigger: GGAAATAGACTTTAAGATGGCTGCCAGTAAGTGGCAGTGCTGGGACTTAACTCGGGTCTCATCATTAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331497.3
CDS CAA 72 bp	CTGGAGATTATAAGGGCCCTAAAGCCTTTGCCTGCTTaGTATTTTCTGCCAACCCCTCATTTCCCAATCTCT	+
Preference number: 6 (lower is better) Translates to: LEIIRALKPLPA*YFLPTPHFPIS Trigger: AGAGATTGGGAAATGAGGGGTTGGCAGAAAATACAAAGCAGGCAAAGGCTTTAGGGCCCTTATAATCTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331497.3
CDS GCA 72 bp	TTCCTTATTTGTAAAAGGGACCTCTTAATCCGGGATTaGCTACACCATGGCACCATTGTAAAAATCTGGTTA	+
Preference number: 6 (lower is better) Translates to: FLICKRDLLIRD*LHHGTIVKIWL Trigger: TAACCAGATTTTTACAATGGTGCCATGGTGTAGGCAATCCCGGATTAAGAGGTCCCTTTTACAAATAAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331497.3

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