Pregenerated sensors for NGB (Homo sapiens)
Ensembl gene IDs: ENSG00000165553Ensembl transcript IDs: ENST00000298352.4, ENST00000298352.5
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCTGAGCCAGAAAGGAGGGCCAGGGGAGGTAAGACTCACTCCTaGAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: QAEPERRARGGKTHS*RSGLVMKGWGNSGL Trigger: GAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTGAGTCTTACCTCCCCTGGCCCTCCTTTCTGGCTCAGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 90 bp | CTGCCTGAGTACTGGCACACAGCGGGCAGTGAATCTGAGGAGCTGTaGCCTCACAGTCGCTGCAGGCTGAGCCAGAAAGGAGGGCCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: LPEYWHTAGSESEEL*PHSRCRLSQKGGPG Trigger: CCCTGGCCCTCCTTTCTGGCTCAGCCTGCAGCGACTGTGAGGCCACAGCTCCTCAGATTCACTGCCCGCTGTGTGCCAGTACTCAGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR GCA 90 bp | CACACAGCGGGCAGTGAATCTGAGGAGCTGTGGCCTCACAGTCGCTaGAGGCTGAGCCAGAAAGGAGGGCCAGGGGAGGTAAGACTCACT | + |
|
Preference number: 1 (lower is better) Translates to: HTAGSESEELWPHSR*RLSQKGGPGEVRLT Trigger: AGTGAGTCTTACCTCCCCTGGCCCTCCTTTCTGGCTCAGCCTGCAGCGACTGTGAGGCCACAGCTCCTCAGATTCACTGCCCGCTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 90 bp | GGAGGTAAGACTCACTCCTGCAGGAGCGGGTTGGTGATGAAGGGCTaGGGGAACTCGGGTCTCTCTGGGATGAAGTCACCCCTCCTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GGKTHSCRSGLVMKG*GNSGLSGMKSPLLP Trigger: AGGAAGGAGGGGTGACTTCATCCCAGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTGAGTCTTACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR GCA 90 bp | GGGAAAGGGAATGCCGCCAAAGGAAACCGACTCTGTCAGGGCATCTaGACAGCCCGCGAGACTCAAATGAGACCCATTGAGACCCAGGTC | + |
|
Preference number: 1 (lower is better) Translates to: GKGNAAKGNRLCQGI*TARETQMRPIETQV Trigger: GACCTGGGTCTCAATGGGTCTCATTTGAGTCTCGCGGGCTGTGCAGATGCCCTGACAGAGTCGGTTTCCTTTGGCGGCATTCCCTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 90 bp | TCTCCAGTGTGGCCAAGGGGACAAGGACCAAGATGCAGGGAAGCTTaGGGAGCCTGGGCTACAACAGATACAGGCCAACAGACAGACACA | + |
|
Preference number: 1 (lower is better) Translates to: SPVWPRGQGPRCREA*GAWATTDTGQQTDT Trigger: TGTGTCTGTCTGTTGGCCTGTATCTGTTGTAGCCCAGGCTCCCCAAGCTTCCCTGCATCTTGGTCCTTGTCCCCTTGGCCACACTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGCAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTGGGCTCTGTCAGGGCATCTaGACAGCCCGCGAGACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SCRSGLVMKGWGNSGLSGLCQGI*TARETQ Trigger: TTGAGTCTCGCGGGCTGTGCAGATGCCCTGACAGAG...CCCAGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | CACTCCTGCAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTACCTGGCCAGCTAGCTaGGTTCCTGCAGCAGCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HSCRSGLVMKGWGNSGLSTWPAS*VPAAAE Trigger: TTCCGCTGCTGCAGGAACCCAGCTAGCTGGCCAGGT...AGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CAA 90 bp | GAAAGGAGGGCCAGGGGAGGTAAGACTCACTCCTGCAGGAGCGGGTaGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTGGGATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERRARGGKTHSCRSG*VMKGWGNSGLSGMK Trigger: CTTCATCCCAGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTGAGTCTTACCTCCCCTGGCCCTCCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | GACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGGCACAGACACAGATGGATaGGGGCTGCCGGGCGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: DHSQHRANGTSADGWGEGTDTDG*GLPGGV Trigger: GACCCCGCCCGGCAGCCCCCATCCATCTGTGTCTGT...GCCCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGCAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTGGGCCAGAAGCCCCTTCCTaGAGGAAAAGCCACTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SCRSGLVMKGWGNSGLSGPEAPS*RKSHSF Trigger: GAAGGAGTGGCTTTTCCTCCAGGAAGGGGCTTCTGG...CCCAGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR TCA 90 bp | ACTCACTCCTGCAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTGGCCTGCACTCACCTaGAGAAGCAGGACAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: THSCRSGLVMKGWGNSGLWPALT*RSRTDR Trigger: TCTGTCTGTCCTGCTTCTTCAGGTGAGTGCAGGCCA...GAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR TCA 90 bp | CACTCCTGCAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTTCAAATGAGACCCATTaGGACCCAGGTCCCCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HSCRSGLVMKGWGNSGLSSNETH*DPGPPS Trigger: GGAAGGGGGACCTGGGTCTCAATGGGTCTCATTTGA...AGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | GACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGGCACAGACAGACACAGATaGATGGGGGCTGCCGGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: DHSQHRANGTSADGWGEGTDRHR*MGAAGR Trigger: CCGCCCGGCAGCCCCCATCCATCTGTGTCTGTCTGT...GCCCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTCACTCCTGCAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTGCTCCCACTGCCTaGGATTCCACCAAGAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: THSCRSGLVMKGWGNSGLSAPTA*DSTKKA Trigger: AGCCTTCTTGGTGGAATCCCAGGCAGTGGGAGCAGA...GAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR TCA 90 bp | GACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGGCCGGGTCTCTCTGGGATaGAGTCACCCCTCCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: DHSQHRANGTSADGWGEGRVSLG*SHPSFL Trigger: CAGGAAGGAGGGGTGACTTCATCCCAGAGAGACCCG...GCCCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTACTGGCACACAGCGGGCAGTGAATCTGAGGAGCTGTGGCCTCACAGTCGCTGAAGCTTGGGGAGCCTaGGCTACAACAGATACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: STGTQRAVNLRSCGLTVAEAWGA*ATTDTG Trigger: GCCTGTATCTGTTGTAGCCCAGGCTCCCCAAGCTTC...AGCGACTGTGAGGCCACAGCTCCTCAGATTCACTGCCCGCTGTGTGCCAGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTACTGGCACACAGCGGGCAGTGAATCTGAGGAGCTGTGGCCTCACAGTCGCTTTGGTGATGAAGGGCTaGGGGAACTCGGGTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: STGTQRAVNLRSCGLTVALVMKG*GNSGLS Trigger: AGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAA...AGCGACTGTGAGGCCACAGCTCCTCAGATTCACTGCCCGCTGTGTGCCAGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGCAGCAGCGGAATAGTCAGGGAGTTCCCAGCAGAAGTGCTGAATGAGGGATGGACTCTAGGATACTaGGACCCAGCCCTGCCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SCSSGIVREFPAEVLNEGWTLGY*DPALPH Trigger: ATGGGGCAGGGCTGGGTCTCAGTATCCTAGAGTCCA...TCCCTCATTCAGCACTTCTGCTGGGAACTCCCTGACTATTCCGCTGCTGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR TCA 90 bp | AGGACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGCCCGCGAGACTCAAATaGGACCCATTGAGACCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RTTVSTEQMVQVQMAGVRPARLK*DPLRPR Trigger: CCTGGGTCTCAATGGGTCTCATTTGAGTCTCGCGGG...CCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTGAATCTGAGGAGCTGTGGCCTCACAGTCGCTGCAGGCTGAGCCAGAAAGGAAGCAGAAGTGCTGAATaGGGGAAAGGGAATGCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: SESEELWPHSRCRLSQKGSRSAE*GKGNAA Trigger: GGCGGCATTCCCTTTCCCTCATTCAGCACTTCTGCT...TCCTTTCTGGCTCAGCCTGCAGCGACTGTGAGGCCACAGCTCCTCAGATTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR GCA 90 bp | GACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGGCGGTAAGACTCACTCCTaGAGGAGCGGGTTGGTGATG | + |
|
Preference number: 2 (lower is better) Translates to: DHSQHRANGTSADGWGEGGKTHS*RSGLVM Trigger: CATCACCAACCCGCTCCTGCAGGAGTGAGTCTTACC...GCCCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGCCACTCCTTCTGCAGCTGGACTCTAGGATACTGAGACCCAGCCCTGCCATCACCTCTCCAGTGTaGCCAAGGGGACAAGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: EKPLLLQLDSRILRPSPAITSPV*PRGQGP Trigger: TGGTCCTTGTCCCCTTGGCCACACTGGAGAGGTGAT...GGCAGGGCTGGGTCTCAGTATCCTAGAGTCCAGCTGCAGAAGGAGTGGCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGCAGGACAGAAGGCGCTaGAAGCTCAGCCATCTCACC | + |
|
Preference number: 2 (lower is better) Translates to: RTTVSTEQMVQVQMAGVRQDRRR*KLSHLT Trigger: GGTGAGATGGCTGAGCTTCCAGCGCCTTCTGTCCTG...CCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | GACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGGCGAACTCGGGTCTCTCTaGGATGAAGTCACCCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: DHSQHRANGTSADGWGEGELGSL*DEVTPP Trigger: AGGAGGGGTGACTTCATCCCAGAGAGACCCGAGTTC...GCCCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAGCTGTGGCCTCACAGTCGCTGCAGGCTGAGCCAGAAAGGAGGGCCAGGGCTTTCTCTTTATTTGTaGAAAGCAAGCCATCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: EELWPHSRCRLSQKGGPGLSLYL*KASHLG Trigger: CCCAAGATGGCTTGCTTTTCACAAATAAAGAGAAAG...CCCTGGCCCTCCTTTCTGGCTCAGCCTGCAGCGACTGTGAGGCCACAGCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR GCA 90 bp | GACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGGCAGCTCATCCCACCTCTaGCACCAAAACACTCATCGC | + |
|
Preference number: 2 (lower is better) Translates to: DHSQHRANGTSADGWGEGSSSHL*HQNTHR Trigger: GCGATGAGTGTTTTGGTGGCAGAGGTGGGATGAGCT...GCCCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGAGGAAAAGCCACTCCTTCTaGAGCTGGACTCTAGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: RTTVSTEQMVQVQMAGVRKSHSF*SWTLGY Trigger: GTATCCTAGAGTCCAGCTGCAGAAGGAGTGGCTTTT...CCTCACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR GCA 90 bp | TATAGGACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGATGAGGGAAAGGGAATaGCGCCAAAGGAAACCGACT | + |
|
Preference number: 2 (lower is better) Translates to: YRTTVSTEQMVQVQMAGVMRERE*RQRKPT Trigger: AGTCGGTTTCCTTTGGCGGCATTCCCTTTCCCTCAT...CACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTCCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGCACACAGAACCAGTTTATTTCTCATGAATTTATAGGACCACAGTCAGCACAGCCCCTCCCCACCTaGCCAGCTAGCTGGGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RGTQNQFISHEFIGPQSAQPLPT*PASWVP Trigger: AGGAACCCAGCTAGCTGGCCAGGTGGGGAGGGGCTG...TGCTGACTGTGGTCCTATAAATTCATGAGAAATAAACTGGTTCTGTGTGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CAA 90 bp | AGGCTAAAGCTGCTCTTTCTCTTTATTTGTGAAAAGCAAGCCATCTaGGGGCAGGAAAGCAGTGAAGGGACTGGGCAGGCAGGACAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RLKLLFLFICEKQAI*GQESSEGTGQAGQK Trigger: CTTCTGTCCTGCCTGCCCAGTCCCTTCACTGCTTTCCTGCCCCAAGATGGCTTGCTTTTCACAAATAAAGAGAAAGAGCAGCTTTAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 72 bp | GCAGTGAAGGGACTGGGCAGGCAGGACAGAAGGCGCTaGAAGCTCAGCCATCTCACCCCCGCCTTGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AVKGLGRQDRRR*KLSHLTPALAC Trigger: GCAGGCCAAGGCGGGGGTGAGATGGCTGAGCTTCCAGCGCCTTCTGTCCTGCCTGCCCAGTCCCTTCACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGCAGGAGCGGGTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTGGGCATCTCACCCCCGCCTaGGCCTGCACTCACCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCRSGLVMKGWGNSGLSGHLTPA*ACTHLK Trigger: CTTCAGGTGAGTGCAGGCCAAGGCGGGGGTGAGATG...CCCAGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 72 bp | GTTGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCTaGGATGAAGTCACCCCTCCTTCCTGGCCGGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VGDEGLGELGSL*DEVTPPSWPVP Trigger: GGGGACCGGCCAGGAAGGAGGGGTGACTTCATCCCAGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 72 bp | ACTCACTCCTGCAGGAGCGGGTTGGTGATGAAGGGCTaGGGGAACTCGGGTCTCTCTGGGATGAAGTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: THSCRSGLVMKG*GNSGLSGMKSP Trigger: GGGTGACTTCATCCCAGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR TCA 72 bp | CATCTGCACAGCCCGCGAGACTCAAATGAGACCCATTaGGACCCAGGTCCCCCTTCCCTTCCCTGGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HLHSPRDSNETH*DPGPPSLPWQF Trigger: GAACTGCCAGGGAAGGGAAGGGGGACCTGGGTCTCAATGGGTCTCATTTGAGTCTCGCGGGCTGTGCAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR TCA 72 bp | TCTGTCAGGGCATCTGCACAGCCCGCGAGACTCAAATaGGACCCATTGAGACCCAGGTCCCCCTTCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVRASAQPARLK*DPLRPRSPFPS Trigger: GGAAGGGAAGGGGGACCTGGGTCTCAATGGGTCTCATTTGAGTCTCGCGGGCTGTGCAGATGCCCTGACAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 72 bp | TACTGGCACACAGCGGGCAGTGAATCTGAGGAGCTGTaGCCTCACAGTCGCTGCAGGCTGAGCCAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YWHTAGSESEEL*PHSRCRLSQKG Trigger: TCCTTTCTGGCTCAGCCTGCAGCGACTGTGAGGCCACAGCTCCTCAGATTCACTGCCCGCTGTGTGCCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR-3UTR CAA 90 bp | TATAGGACCACAGTCAGCACAGAGCAAATGGTACAAGTGCAGATGGCTGGGGTGTCCTGCAGGAGCGGGTaGGTGATGAAGGGCTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YRTTVSTEQMVQVQMAGVSCRSG*VMKGWG Trigger: CCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGA...CACCCCAGCCATCTGCACTTGTACCATTTGCTCTGTGCTGACTGTGGTCCTATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR GCA 72 bp | AATGCCGCCAAAGGAAACCGACTCTGTCAGGGCATCTaGACAGCCCGCGAGACTCAAATGAGACCCATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NAAKGNRLCQGI*TARETQMRPIE Trigger: CTCAATGGGTCTCATTTGAGTCTCGCGGGCTGTGCAGATGCCCTGACAGAGTCGGTTTCCTTTGGCGGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 72 bp | GGACAAGGACCAAGATGCAGGGAAGCTTGGGGAGCCTaGGCTACAACAGATACAGGCCAACAGACAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: GQGPRCREAWGA*ATTDTGQQTDT Trigger: TGTGTCTGTCTGTTGGCCTGTATCTGTTGTAGCCCAGGCTCCCCAAGCTTCCCTGCATCTTGGTCCTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CCA 72 bp | CCCTTCCCTGGCAGTTCTGATTCTGCTCCCACTGCCTaGGATTCCACCAAGAAGGCTAAAGCTGCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PFPGSSDSAPTA*DSTKKAKAALS Trigger: AGAAAGAGCAGCTTTAGCCTTCTTGGTGGAATCCCAGGCAGTGGGAGCAGAATCAGAACTGCCAGGGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| 3UTR CAA 72 bp | GCCAGGGGAGGTAAGACTCACTCCTGCAGGAGCGGGTaGGTGATGAAGGGCTGGGGGAACTCGGGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARGGKTHSCRSG*VMKGWGNSGLS Trigger: AGAGAGACCCGAGTTCCCCCAGCCCTTCATCACCAACCCGCTCCTGCAGGAGTGAGTCTTACCTCCCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298352.4 |
||
| CDS CCA 90 bp | GGCTCCGGGCGCTCCATGCTGTCCCGGGGACGCGGAGCGCGGGGCTaGGACCCTCAGGGCTCGGGTGCCGTCACCGCACGTGCCGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGRSMLSRGRGARG*DPQGSGAVTARAAP Trigger: TGGCGCGGCACGTGCGGTGACGGCACCCGAGCCCTGAGGGTCCCAGCCCCGCGCTCCGCGTCCCCGGGACAGCATGGAGCGCCCGGAGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 90 bp | CTGCCCGCCAGCTCTGCCGGATCAGCTCGGGCTCCGGGCGCTCCATaGTGTCCCGGGGACGCGGAGCGCGGGGCTGGGACCCTCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPASSAGSARAPGAP*CPGDAERGAGTLRA Trigger: AGCCCTGAGGGTCCCAGCCCCGCGCTCCGCGTCCCCGGGACAGCATGGAGCGCCCGGAGCCCGAGCTGATCCGGCAGAGCTGGCGGGCAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 90 bp | ACGGTGCCGTGCTCCAGCGGGCTGCGGCTCACTGCCCGCCAGCTCTaGCGGATCAGCTCGGGCTCCGGGCGCTCCATGCTGTCCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TVPCSSGLRLTARQL*RISSGSGRSMLSRG Trigger: TCCCCGGGACAGCATGGAGCGCCCGGAGCCCGAGCTGATCCGGCAGAGCTGGCGGGCAGTGAGCCGCAGCCCGCTGGAGCACGGCACCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 90 bp | CCTGGCAAACAGGACGGTGCCGTGCTCCAGCGGGCTGCGGCTCACTaGCCGCCAGCTCTGCCGGATCAGCTCGGGCTCCGGGCGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGKQDGAVLQRAAAH*PPALPDQLGLRALH Trigger: ATGGAGCGCCCGGAGCCCGAGCTGATCCGGCAGAGCTGGCGGGCAGTGAGCCGCAGCCCGCTGGAGCACGGCACCGTCCTGTTTGCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 90 bp | GGGCAAACAGCCTGGCAAACAGGACGGTGCCGTGCTCCAGCGGGCTaGGGCTCACTGCCCGCCAGCTCTGCCGGATCAGCTCGGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GQTAWQTGRCRAPAG*GSLPASSAGSARAP Trigger: CGGAGCCCGAGCTGATCCGGCAGAGCTGGCGGGCAGTGAGCCGCAGCCCGCTGGAGCACGGCACCGTCCTGTTTGCCAGGCTGTTTGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 90 bp | TGCCGGGCGGGGTCGCCTCTTACTCGCCATCCCAGCCTCGACTCATaGCCTGCACTACGGCCCCGTAGAGTTGGCTCCAGGCAGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CRAGSPLTRHPSLDS*PALRPRRVGSRQPV Trigger: CACGGGCTGCCTGGAGCCAACTCTACGGGGCCGTAGTGCAGGCCATGAGTCGAGGCTGGGATGGCGAGTAAGAGGCGACCCCGCCCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 90 bp | CTGCACTACGGCCCCGTAGAGTTGGCTCCAGGCAGCCCGTGTGGCTaGTGTGAAGGCAGGGCCCAGACACTTCTCCAGCATGTAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHYGPVELAPGSPCG*CEGRAQTLLQHVEQ Trigger: CTGCTCTACATGCTGGAGAAGTGTCTGGGCCCTGCCTTCACACCAGCCACACGGGCTGCCTGGAGCCAACTCTACGGGGCCGTAGTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 90 bp | TCACCCACTGTCGAGAAGGAGCTGAGCTTCACACCCACTGCCCGGTaGTTCCTGCCCAGGCTGGCAAGGTACTCCTCCAGTGAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTVEKELSFTPTAR*FLPRLARYSSSEDR Trigger: CCTGTCCTCACTGGAGGAGTACCTTGCCAGCCTGGGCAGGAAGCACCGGGCAGTGGGTGTGAAGCTCAGCTCCTTCTCGACAGTGGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 90 bp | TCCAGGAACTCAGGCGAGGAGAGACAGTCCTCTGGGCTGGAGAACTaGCGGCAGTTGTACTGGAAGAGGGGCAGCAGGTCAGGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRNSGEERQSSGLEN*RQLYWKRGSRSGSR Trigger: CCTGGAGCCTGACCTGCTGCCCCTCTTCCAGTACAACTGCCGCCAGTTCTCCAGCCCAGAGGACTGTCTCTCCTCGCCTGAGTTCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 90 bp | CTTCCTGATGTGGTCCAGGAACTCAGGCGAGGAGAGACAGTCCTCTaGGCTGGAGAACTGGCGGCAGTTGTACTGGAAGAGGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPDVVQELRRGETVL*AGELAAVVLEEGQQ Trigger: CTGCTGCCCCTCTTCCAGTACAACTGCCGCCAGTTCTCCAGCCCAGAGGACTGTCTCTCCTCGCCTGAGTTCCTGGACCACATCAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | CTGGGACCCTCAGGGCTCGGGTGCCGTCACCGCACGTaGCGCGCCATCTCCTCCGCGACGCGGTCCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGPSGLGCRHRT*RAISSATRSPP Trigger: CGGAGGGGACCGCGTCGCGGAGGAGATGGCGCGGCACGTGCGGTGACGGCACCCGAGCCCTGAGGGTCCCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | AGCTCTGCCGGATCAGCTCGGGCTCCGGGCGCTCCATaGTGTCCCGGGGACGCGGAGCGCGGGGCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSAGSARAPGAP*CPGDAERGAGT Trigger: GGTCCCAGCCCCGCGCTCCGCGTCCCCGGGACAGCATGGAGCGCCCGGAGCCCGAGCTGATCCGGCAGAGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 72 bp | CGCTCCATGCTGTCCCGGGGACGCGGAGCGCGGGGCTaGGACCCTCAGGGCTCGGGTGCCGTCACCGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: RSMLSRGRGARG*DPQGSGAVTAR Trigger: ACGTGCGGTGACGGCACCCGAGCCCTGAGGGTCCCAGCCCCGCGCTCCGCGTCCCCGGGACAGCATGGAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | CAGGACGGTGCCGTGCTCCAGCGGGCTGCGGCTCACTaGCCGCCAGCTCTGCCGGATCAGCTCGGGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QDGAVLQRAAAH*PPALPDQLGLR Trigger: CCGGAGCCCGAGCTGATCCGGCAGAGCTGGCGGGCAGTGAGCCGCAGCCCGCTGGAGCACGGCACCGTCCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | TGCTCCAGCGGGCTGCGGCTCACTGCCCGCCAGCTCTaGCGGATCAGCTCGGGCTCCGGGCGCTCCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSGLRLTARQL*RISSGSGRSML Trigger: CAGCATGGAGCGCCCGGAGCCCGAGCTGATCCGGCAGAGCTGGCGGGCAGTGAGCCGCAGCCCGCTGGAGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | GCCTGGCAAACAGGACGGTGCCGTGCTCCAGCGGGCTaGGGCTCACTGCCCGCCAGCTCTGCCGGATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AWQTGRCRAPAG*GSLPASSAGSA Trigger: AGCTGATCCGGCAGAGCTGGCGGGCAGTGAGCCGCAGCCCGCTGGAGCACGGCACCGTCCTGTTTGCCAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | CAGGCTCCAGGGCAAACAGCCTGGCAAACAGGACGGTaGCGTGCTCCAGCGGGCTGCGGCTCACTGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: QAPGQTAWQTGR*RAPAGCGSLPA Trigger: GGCGGGCAGTGAGCCGCAGCCCGCTGGAGCACGGCACCGTCCTGTTTGCCAGGCTGTTTGCCCTGGAGCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | TCCAGGGCAAACAGCCTGGCAAACAGGACGGTGCCGTaGTCCAGCGGGCTGCGGCTCACTGCCCGCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRANSLANRTVP*SSGLRLTARQL Trigger: GAGCTGGCGGGCAGTGAGCCGCAGCCCGCTGGAGCACGGCACCGTCCTGTTTGCCAGGCTGTTTGCCCTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CAA 90 bp | GCCATCCCAGCCTCGACTCATGGCCTGCACTACGGCCCCGTAGAGTaGGCTCCAGGCAGCCCGTGTGGCTGGTGTGAAGGCAGGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AIPASTHGLHYGPVE*APGSPCGWCEGRAQ Trigger: CTGGGCCCTGCCTTCACACCAGCCACACGGGCTGCCTGGAGCCAACTCTACGGGGCCGTAGTGCAGGCCATGAGTCGAGGCTGGGATGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CAA 72 bp | GCCTCGACTCATGGCCTGCACTACGGCCCCGTAGAGTaGGCTCCAGGCAGCCCGTGTGGCTGGTGTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASTHGLHYGPVE*APGSPCGWCEG Trigger: GCCTTCACACCAGCCACACGGGCTGCCTGGAGCCAACTCTACGGGGCCGTAGTGCAGGCCATGAGTCGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 72 bp | GGGTCGCCTCTTACTCGCCATCCCAGCCTCGACTCATaGCCTGCACTACGGCCCCGTAGAGTTGGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPLTRHPSLDS*PALRPRRVGSR Trigger: CCTGGAGCCAACTCTACGGGGCCGTAGTGCAGGCCATGAGTCGAGGCTGGGATGGCGAGTAAGAGGCGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CAA 90 bp | TCAGGCGAGGAGAGACAGTCCTCTGGGCTGGAGAACTGGCGGCAGTaGTACTGGAAGAGGGGCAGCAGGTCAGGCTCCAGGGCAAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGEERQSSGLENWRQ*YWKRGSRSGSRANS Trigger: GCTGTTTGCCCTGGAGCCTGACCTGCTGCCCCTCTTCCAGTACAACTGCCGCCAGTTCTCCAGCCCAGAGGACTGTCTCTCCTCGCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS GCA 72 bp | GTCGAGAAGGAGCTGAGCTTCACACCCACTGCCCGGTaGTTCCTGCCCAGGCTGGCAAGGTACTCCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VEKELSFTPTAR*FLPRLARYSSS Trigger: ACTGGAGGAGTACCTTGCCAGCCTGGGCAGGAAGCACCGGGCAGTGGGTGTGAAGCTCAGCTCCTTCTCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 72 bp | CAGTCCTCTGGGCTGGAGAACTGGCGGCAGTTGTACTaGAAGAGGGGCAGCAGGTCAGGCTCCAGGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QSSGLENWRQLY*KRGSRSGSRAN Trigger: GTTTGCCCTGGAGCCTGACCTGCTGCCCCTCTTCCAGTACAACTGCCGCCAGTTCTCCAGCCCAGAGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CAA 72 bp | GAGAGACAGTCCTCTGGGCTGGAGAACTGGCGGCAGTaGTACTGGAAGAGGGGCAGCAGGTCAGGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ERQSSGLENWRQ*YWKRGSRSGSR Trigger: CCTGGAGCCTGACCTGCTGCCCCTCTTCCAGTACAACTGCCGCCAGTTCTCCAGCCCAGAGGACTGTCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 72 bp | CCAGGAACTCAGGCGAGGAGAGACAGTCCTCTGGGCTaGAGAACTGGCGGCAGTTGTACTGGAAGAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGTQARRDSPLG*RTGGSCTGRGA Trigger: TGCCCCTCTTCCAGTACAACTGCCGCCAGTTCTCCAGCCCAGAGGACTGTCTCTCCTCGCCTGAGTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS TCA 72 bp | GTGCTTCCTGCCCAGGCTGGCAAGGTACTCCTCCAGTaGGGACAGGTCTTCCACATTGGTCACTGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: VLPAQAGKVLLQ*GQVFHIGHCSI Trigger: GATGCTGCAGTGACCAATGTGGAAGACCTGTCCTCACTGGAGGAGTACCTTGCCAGCCTGGGCAGGAAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CAA 90 bp | CCCAGGCTGGCAAGGTACTCCTCCAGTGAGGACAGGTCTTCCACATaGGTCACTGCAGCATCAATCACGAGCATCACCTTCCTGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRLARYSSSEDRSST*VTAASITSITFLMW Trigger: CCACATCAGGAAGGTGATGCTCGTGATTGATGCTGCAGTGACCAATGTGGAAGACCTGTCCTCACTGGAGGAGTACCTTGCCAGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CCA 72 bp | CAAGGTACTCCTCCAGTGAGGACAGGTCTTCCACATTaGTCACTGCAGCATCAATCACGAGCATCACCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QGTPPVRTGLPH*SLQHQSRASPS Trigger: GGAAGGTGATGCTCGTGATTGATGCTGCAGTGACCAATGTGGAAGACCTGTCCTCACTGGAGGAGTACCTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||
| CDS CAA 72 bp | GCAAGGTACTCCTCCAGTGAGGACAGGTCTTCCACATaGGTCACTGCAGCATCAATCACGAGCATCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARYSSSEDRSST*VTAASITSITF Trigger: GAAGGTGATGCTCGTGATTGATGCTGCAGTGACCAATGTGGAAGACCTGTCCTCACTGGAGGAGTACCTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298352.5 |
||