Pregenerated sensors for NFKB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000077150Ensembl transcript IDs: ENST00000189444.11, ENST00000336486.5, ENST00000369966.8, ENST00000428099.6, ENST00000467116.5, ENST00000471698.6, ENST00000473400.1, ENST00000601386.5, ENST00000652277.1, ENST00000661543.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTGGCGGCGGCTCTGGTTGCGGCTTCTCTCCGCGCCCGACCCACCTaGGACCGGTCGCGACACCTCGCCTGCCAGCAGGGCTCAGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: VAAALVAASLRARPT*DRSRHLACQQGSGP Trigger: CGGCCCTGAGCCCTGCTGGCAGGCGAGGTGTCGCGACCGGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369966.8 ENST00000428099.6 |
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| CDS TCA 90 bp | GGGGAGGGTCCGACCTCCTCCAGCCGCCTGTCCGGGTGTGGCGGGTaGGATCCGGTGGAGAGCGAGATCCGGAGTTGGGCTTGGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GEGPTSSSRLSGCGG*DPVESEIRSWAWPG Trigger: CCCCGGCCAAGCCCAACTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGGAGGAGGTCGGACCCTCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471698.6 ENST00000652277.1 |
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| CDS CCA 90 bp | GCCACCCAGGGGTCTGAATCCAGCCACTCACCGTGGCGGCGGCTCTaGTTGCGGCTTCTCTCCGCGCCCGACCCACCTGGGACCGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: ATQGSESSHSPWRRL*LRLLSAPDPPGTGR Trigger: GCGACCGGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGACCCCTGGGTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS GCA 90 bp | CCCAGGGGTCTGAATCCAGCCACTCACCGTGGCGGCGGCTCTGGTTaGGGCTTCTCTCCGCGCCCGACCCACCTGGGACCGGTCGCGACA | + |
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Preference number: 5 (lower is better) Translates to: PRGLNPATHRGGGSG*GFSPRPTHLGPVAT Trigger: TGTCGCGACCGGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGACCCCTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS CCA 90 bp | TCTCTTGTCCCGGCCACCCAGGGGTCTGAATCCAGCCACTCACCGTaGCGGCGGCTCTGGTTGCGGCTTCTCTCCGCGCCCGACCCACCT | + |
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Preference number: 5 (lower is better) Translates to: SLVPATQGSESSHSP*RRLWLRLLSAPDPP Trigger: AGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGACCCCTGGGTGGCCGGGACAAGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS GCA 90 bp | AAGGTACCCGCTGACCCAGCGCCACCCCGGGCCGGGAGCTTCCGCTaGCTCTCGGCTTTGGCTGCGCCTAACGCTTGGCTTTCTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KVPADPAPPRAGSFR*LSALAAPNAWLSLK Trigger: CTTCAGAGAAAGCCAAGCGTTAGGCGCAGCCAAAGCCGAGAGGCAGCGGAAGCTCCCGGCCCGGGGTGGCGCTGGGTCAGCGGGTACCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428099.6 ENST00000601386.5 |
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| CDS CCA 90 bp | CATCCTTCGCTTTCAAGGCCCCACCGCCCTCATAGTCTCCCTCGCTaGGGCCCATGGAACCCAGCACGTGGCCCAGGGCATCGCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: HPSLSRPHRPHSLPR*GPWNPARGPGHRCA Trigger: GGCACAGCGATGCCCTGGGCCACGTGCTGGGTTCCATGGGCCCCAGCGAGGGAGACTATGAGGGCGGTGGGGCCTTGAAAGCGAAGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336486.5 |
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| CDS CCA 90 bp | AGATTTGGGGGAGGGTCCGACCTCCTCCAGCCGCCTGTCCGGGTGTaGCGGGTGAGATCCGGTGGAGAGCGAGATCCGGAGTTGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: RFGGGSDLLQPPVRV*RVRSGGERDPELGL Trigger: CAAGCCCAACTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGGAGGAGGTCGGACCCTCCCCCAAATCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000471698.6 ENST00000652277.1 |
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| CDS CCA 90 bp | CCCAGAATTTTAGACGCCCGCCTCCTCCAGCCGCCTGTCCGGGTGTaGCGGGTGAGATCCGGTGGAGAGCGAGATCCGGAGTTGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: PRILDARLLQPPVRV*RVRSGGERDPELGL Trigger: CAAGCCCAACTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGGAGGAGGCGGGCGTCTAAAATTCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000189444.11 ENST00000467116.5 ENST00000661543.1 |
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| CDS GCA 90 bp | TGGGCCCCACAGAAACGGCGCAGATCCCCAGCTCCGAGCATTGCTTaGCCACCAGACTGTGGGCATGAGCACGAGGTGGGTCACTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: WAPQKRRRSPAPSIA*PPDCGHEHEVGHCV Trigger: CACACAGTGACCCACCTCGTGCTCATGCCCACAGTCTGGTGGGCAAGCAATGCTCGGAGCTGGGGATCTGCGCCGTTTCTGTGGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS GCA 90 bp | TCGCTGGGGCCCATGGAACCCAGCACGTGGCCCAGGGCATCGCTGTaGCTGCACTTAACGTTTCGCAGCACGTGTCTCCGTTCTCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SLGPMEPSTWPRASL*LHLTFRSTCLRSRP Trigger: AGGACGAGAACGGAGACACGTGCTGCGAAACGTTAAGTGCAGGCACAGCGATGCCCTGGGCCACGTGCTGGGTTCCATGGGCCCCAGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336486.5 |
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| CDS CCA 90 bp | TTAGACGCCCGCGGGTCCGCGTATCTTTGTACAACGGTGTCGACGTaGATCCGAGTGTCGTCGCCTGCGCGCCCTTTCCGGCTGTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LDARGSAYLCTTVST*IRVSSPARPFRLCA Trigger: TGCACACAGCCGGAAAGGGCGCGCAGGCGACGACACTCGGATCCACGTCGACACCGTTGTACAAAGATACGCGGACCCGCGGGCGTCTAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS GCA 90 bp | GTATCTTTGTACAACGGTGTCGACGTGGATCCGAGTGTCGTCGCCTaGGCGCCCTTTCCGGCTGTGTGCAGCTGCTGCTCTCCAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: VSLYNGVDVDPSVVA*APFPAVCSCCSPAP Trigger: TGGGGCTGGAGAGCAGCAGCTGCACACAGCCGGAAAGGGCGCGCAGGCGACGACACTCGGATCCACGTCGACACCGTTGTACAAAGATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS TCA 90 bp | CAGATCCCCAGCTCCGAGCATTGCTTGCCCACCAGACTGTGGGCATaGGCACGAGGTGGGTCACTGTGTGTTACCAGGTCCACCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: QIPSSEHCLPTRLWA*ARGGSLCVTRSTSI Trigger: GATCGAGGTGGACCTGGTAACACACAGTGACCCACCTCGTGCTCATGCCCACAGTCTGGTGGGCAAGCAATGCTCGGAGCTGGGGATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS GCA 90 bp | CGCACTATACTCAGATCCATCACCTTCTTCAGTTCTTTGGCCTCTTaGTCCAGCTCCCGCTGCTCGGCCTCCGTAAGGCCCTGGGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: RTILRSITFFSSLAS*SSSRCSASVRPWGL Trigger: TAGGCCCCAGGGCCTTACGGAGGCCGAGCAGCGGGAGCTGGAGCAAGAGGCCAAAGAACTGAAGAAGGTGATGGATCTGAGTATAGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CCA 90 bp | TCGTTTTCAGCATGGATGTCAGCACCTGGGAGAGGGAGGCCGTCATaGGGCGGTATGGTGGGGGCCTACATTAAGGACTGCAAAGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: SFSAWMSAPGRGRPS*GGMVGAYIKDCKVG Trigger: CCCGACTTTGCAGTCCTTAATGTAGGCCCCCACCATACCGCCCCATGACGGCCTCCCTCTCCCAGGTGCTGACATCCATGCTGAAAACGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473400.1 |
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| CDS CCA 90 bp | ACGAGGTGGGTCACTGTGTGTTACCAGGTCCACCTCGATCTTGGCTaGTCCCTCGTAGTTACAGATCTTGACAGTGGGATAGGTCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: TRWVTVCYQVHLDLG*SLVVTDLDSGIGLS Trigger: CGAAAGACCTATCCCACTGTCAAGATCTGTAACTACGAGGGACCAGCCAAGATCGAGGTGGACCTGGTAACACACAGTGACCCACCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000471698.6 ENST00000652277.1 ENST00000661543.1 |
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| CDS CCA 72 bp | GCTCTGGTTGCGGCTTCTCTCCGCGCCCGACCCACCTaGGACCGGTCGCGACACCTCGCCTGCCAGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ALVAASLRARPT*DRSRHLACQQG Trigger: GCCCTGCTGGCAGGCGAGGTGTCGCGACCGGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369966.8 ENST00000428099.6 |
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| CDS GCA 72 bp | CCGAGTGTCGTCGCCTGCGCGCCCTTTCCGGCTGTGTaGAGCTGCTGCTCTCCAGCCCCAGGCGCTGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PSVVACAPFPAV*SCCSPAPGAVR Trigger: GCGGACAGCGCCTGGGGCTGGAGAGCAGCAGCTGCACACAGCCGGAAAGGGCGCGCAGGCGACGACACTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS CCA 72 bp | CCGGCCACCCAGGGGTCTGAATCCAGCCACTCACCGTaGCGGCGGCTCTGGTTGCGGCTTCTCTCCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PATQGSESSHSP*RRLWLRLLSAP Trigger: GGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGACCCCTGGGTGGCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS CAA 90 bp | ACCCAGGGGTCTGAATCCAGCCACTCACCGTGGCGGCGGCTCTGGTaGCGGCTTCTCTCCGCGCCCGACCCACCTGGGACCGGTCGCGAC | + |
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Preference number: 6 (lower is better) Translates to: TQGSESSHSPWRRLW*RLLSAPDPPGTGRD Trigger: GTCGCGACCGGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGACCCCTGGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS TCA 72 bp | CCCGCCTCCTCCAGCCGCCTGTCCGGGTGTGGCGGGTaGGATCCGGTGGAGAGCGAGATCCGGAGTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PASSSRLSGCGG*DPVESEIRSWA Trigger: AGCCCAACTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGGAGGAGGCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000189444.11 ENST00000467116.5 ENST00000661543.1 |
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| CDS GCA 72 bp | CTGAATCCAGCCACTCACCGTGGCGGCGGCTCTGGTTaGGGCTTCTCTCCGCGCCCGACCCACCTGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: LNPATHRGGGSG*GFSPRPTHLGP Trigger: CGGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS GCA 72 bp | GCTGACCCAGCGCCACCCCGGGCCGGGAGCTTCCGCTaGCTCTCGGCTTTGGCTGCGCCTAACGCTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ADPAPPRAGSFR*LSALAAPNAWL Trigger: AAGCCAAGCGTTAGGCGCAGCCAAAGCCGAGAGGCAGCGGAAGCTCCCGGCCCGGGGTGGCGCTGGGTCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428099.6 ENST00000601386.5 |
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| CDS CCA 72 bp | CCAGCCGCCTGTCCGGGTGTGGCGGGTGAGATCCGGTaGAGAGCGAGATCCGGAGTTGGGCTTGGCCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: PAACPGVAGEIR*RARSGVGLGRG Trigger: TCCCCGGCCAAGCCCAACTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000189444.11 ENST00000467116.5 ENST00000471698.6 ENST00000652277.1 ENST00000661543.1 |
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| CDS CCA 72 bp | CCCCACCGCCCTCATAGTCTCCCTCGCTGGGGCCCATaGAACCCAGCACGTGGCCCAGGGCATCGCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PHRPHSLPRWGP*NPARGPGHRCA Trigger: GGCACAGCGATGCCCTGGGCCACGTGCTGGGTTCCATGGGCCCCAGCGAGGGAGACTATGAGGGCGGTGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336486.5 |
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| CDS CCA 72 bp | GGGTCTGAATCCAGCCACTCACCGTGGCGGCGGCTCTaGTTGCGGCTTCTCTCCGCGCCCGACCCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GSESSHSPWRRL*LRLLSAPDPPG Trigger: CCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGACCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS CCA 72 bp | GGAGGGTCCGACCTCCTCCAGCCGCCTGTCCGGGTGTaGCGGGTGAGATCCGGTGGAGAGCGAGATCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GGSDLLQPPVRV*RVRSGGERDPE Trigger: CTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGGAGGAGGTCGGACCCTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000471698.6 ENST00000652277.1 |
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| CDS TCA 72 bp | CCGACCTCCTCCAGCCGCCTGTCCGGGTGTGGCGGGTaGGATCCGGTGGAGAGCGAGATCCGGAGTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PTSSSRLSGCGG*DPVESEIRSWA Trigger: AGCCCAACTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGGAGGAGGTCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000471698.6 ENST00000652277.1 |
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| CDS GCA 72 bp | AGAATTTTAGACGCCCGCCGTGGCGGCGGCTCTGGTTaGGGCTTCTCTCCGCGCCCGACCCACCTGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: RILDARRGGGSG*GFSPRPTHLGP Trigger: CGGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGCGGGCGTCTAAAATTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428099.6 |
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| CDS CCA 72 bp | TTAGACGCCCGCCTCCTCCAGCCGCCTGTCCGGGTGTaGCGGGTGAGATCCGGTGGAGAGCGAGATCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: LDARLLQPPVRV*RVRSGGERDPE Trigger: CTCCGGATCTCGCTCTCCACCGGATCTCACCCGCCACACCCGGACAGGCGGCTGGAGGAGGCGGGCGTCTAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000189444.11 ENST00000467116.5 ENST00000661543.1 |
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| CDS CCA 72 bp | TCCCAGAATTTTAGACGCCCGCCGTGGCGGCGGCTCTaGTTGCGGCTTCTCTCCGCGCCCGACCCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SQNFRRPPWRRL*LRLLSAPDPPG Trigger: CCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGCGGGCGTCTAAAATTCTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428099.6 |
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| CDS CAA 72 bp | TCTGAATCCAGCCACTCACCGTGGCGGCGGCTCTGGTaGCGGCTTCTCTCCGCGCCCGACCCACCTGGGACC | + |
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Preference number: 6 (lower is better) Translates to: SESSHSPWRRLW*RLLSAPDPPGT Trigger: GGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS CAA 72 bp | CAGAATTTTAGACGCCCGCCGTGGCGGCGGCTCTGGTaGCGGCTTCTCTCCGCGCCCGACCCACCTGGGACC | + |
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Preference number: 6 (lower is better) Translates to: QNFRRPPWRRLW*RLLSAPDPPGT Trigger: GGTCCCAGGTGGGTCGGGCGCGGAGAGAAGCCGCAACCAGAGCCGCCGCCACGGCGGGCGTCTAAAATTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428099.6 |
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| CDS CCA 72 bp | CTTTCAAGGCCCCACCGCCCTCATAGTCTCCCTCGCTaGGGCCCATGGAACCCAGCACGTGGCCCAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LSRPHRPHSLPR*GPWNPARGPGH Trigger: ATGCCCTGGGCCACGTGCTGGGTTCCATGGGCCCCAGCGAGGGAGACTATGAGGGCGGTGGGGCCTTGAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336486.5 |
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| CDS CCA 72 bp | CGCGGGTCCGCGTATCTTTGTACAACGGTGTCGACGTaGATCCGAGTGTCGTCGCCTGCGCGCCCTTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: RGSAYLCTTVST*IRVSSPARPFR Trigger: CCGGAAAGGGCGCGCAGGCGACGACACTCGGATCCACGTCGACACCGTTGTACAAAGATACGCGGACCCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS TCA 72 bp | CTCCCTCTTTTCTCTTGTCCCGGCCACCCAGGGGTCTaGATCCAGCCACTCACCGTGGCGGCGGCTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LPLFSCPGHPGV*IQPLTVAAALV Trigger: AACCAGAGCCGCCGCCACGGTGAGTGGCTGGATTCAGACCCCTGGGTGGCCGGGACAAGAGAAAAGAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS GCA 72 bp | TACAACGGTGTCGACGTGGATCCGAGTGTCGTCGCCTaGGCGCCCTTTCCGGCTGTGTGCAGCTGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: YNGVDVDPSVVA*APFPAVCSCCS Trigger: AGAGCAGCAGCTGCACACAGCCGGAAAGGGCGCGCAGGCGACGACACTCGGATCCACGTCGACACCGTTGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS CCA 72 bp | CAGCACCTGGGAGAGGGAGGCCGTCATGGGGCGGTATaGTGGGGGCCTACATTAAGGACTGCAAAGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: QHLGEGGRHGAV*WGPTLRTAKSG Trigger: CCCCGACTTTGCAGTCCTTAATGTAGGCCCCCACCATACCGCCCCATGACGGCCTCCCTCTCCCAGGTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473400.1 |
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| CDS GCA 72 bp | CAGAAACGGCGCAGATCCCCAGCTCCGAGCATTGCTTaGCCACCAGACTGTGGGCATGAGCACGAGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QKRRRSPAPSIA*PPDCGHEHEVG Trigger: ACCCACCTCGTGCTCATGCCCACAGTCTGGTGGGCAAGCAATGCTCGGAGCTGGGGATCTGCGCCGTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS GCA 72 bp | CCCATGGAACCCAGCACGTGGCCCAGGGCATCGCTGTaGCTGCACTTAACGTTTCGCAGCACGTGTCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: PMEPSTWPRASL*LHLTFRSTCLR Trigger: ACGGAGACACGTGCTGCGAAACGTTAAGTGCAGGCACAGCGATGCCCTGGGCCACGTGCTGGGTTCCATGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336486.5 |
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| CDS CCA 72 bp | CGCCCTTTTTCATTGGCTGAAAGTTTAACTCTGGACTaGCGCAGCCAACCCGGAGCGACTCGGGCGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RPFSLAESLTLD*RSQPGATRARP Trigger: GGGGCGCGCCCGAGTCGCTCCGGGTTGGCTGCGCCAGTCCAGAGTTAAACTTTCAGCCAATGAAAAAGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000428099.6 ENST00000601386.5 |
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| CDS CAA 72 bp | GCGCTGTCCGCTAAAGGCCCTCCTCCCTCTTTTCTCTaGTCCCGGCCACCCAGGGGTCTGAATCCAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: ALSAKGPPPSFL*SRPPRGLNPAT Trigger: AGTGGCTGGATTCAGACCCCTGGGTGGCCGGGACAAGAGAAAAGAGGGAGGAGGGCCTTTAGCGGACAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS TCA 72 bp | CCCCCGGAGATTTGCTGTCATGGATGGGCTGGGAGATaGCTGGCTTCAGGGGCAGGGAGAAGGAGCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: PPEICCHGWAGR*LASGAGRRSHH Trigger: GTGATGGCTCCTTCTCCCTGCCCCTGAAGCCAGTCATCTCCCAGCCCATCCATGACAGCAAATCTCCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 90 bp | CCGCACTATACTCAGATCCATCACCTTCTTCAGTTCTTTGGCCTCTaGCTCCAGCTCCCGCTGCTCGGCCTCCGTAAGGCCCTGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PHYTQIHHLLQFFGL*LQLPLLGLRKALGP Trigger: AGGCCCCAGGGCCTTACGGAGGCCGAGCAGCGGGAGCTGGAGCAAGAGGCCAAAGAACTGAAGAAGGTGATGGATCTGAGTATAGTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS TCA 72 bp | AGCTCCGAGCATTGCTTGCCCACCAGACTGTGGGCATaGGCACGAGGTGGGTCACTGTGTGTTACCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSEHCLPTRLWA*ARGGSLCVTRS Trigger: GGACCTGGTAACACACAGTGACCCACCTCGTGCTCATGCCCACAGTCTGGTGGGCAAGCAATGCTCGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CCA 72 bp | CGGAGATTTGCTGTCATGGATGGGCTGGGAGATGACTaGCTTCAGGGGCAGGGAGAAGGAGCCATCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: RRFAVMDGLGDD*LQGQGEGAITG Trigger: GCCAGTGATGGCTCCTTCTCCCTGCCCCTGAAGCCAGTCATCTCCCAGCCCATCCATGACAGCAAATCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 72 bp | AGGACACCCAGGTTGTTAAATTGGGCAGTCATGTCCTaGGGCCCCACAGAAACGGCGCAGATCCCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RTPRLLNWAVMS*GPTETAQIPSS Trigger: GGAGCTGGGGATCTGCGCCGTTTCTGTGGGGCCCAAGGACATGACTGCCCAATTTAACAACCTGGGTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 90 bp | AATTCCCATGACGTTTCCGTGCGTCACGCCTCGCGCCCTTTTTCATaGGCTGAAAGTTTAACTCTGGACTGGCGCAGCCAACCCGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: NSHDVSVRHASRPFS*AESLTLDWRSQPGA Trigger: CGCTCCGGGTTGGCTGCGCCAGTCCAGAGTTAAACTTTCAGCCAATGAAAAAGGGCGCGAGGCGTGACGCACGGAAACGTCATGGGAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000428099.6 ENST00000601386.5 |
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| CDS CAA 72 bp | TCCCAGAATTTTAGACGCCCGCGGGTCCGCGTATCTTaGTACAACGGTGTCGACGTGGATCCGAGTGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: SQNFRRPRVRVS*YNGVDVDPSVV Trigger: GACGACACTCGGATCCACGTCGACACCGTTGTACAAAGATACGCGGACCCGCGGGCGTCTAAAATTCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369966.8 |
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| CDS TCA 72 bp | TGCCTGGTAGTAGCCCTGAACCAAACTACAGCACTCTaGTCAGCAGCAGTGACCATCCAATCCCCTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: CLVVALNQTTAL*SAAVTIQSPVA Trigger: GGCCACAGGGGATTGGATGGTCACTGCTGCTGATCAGAGTGCTGTAGTTTGGTTCAGGGCTACTACCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471698.6 |
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| CDS CAA 72 bp | GACGTTTCCGTGCGTCACGCCTCGCGCCCTTTTTCATaGGCTGAAAGTTTAACTCTGGACTGGCGCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: DVSVRHASRPFS*AESLTLDWRSQ Trigger: TTGGCTGCGCCAGTCCAGAGTTAAACTTTCAGCCAATGAAAAAGGGCGCGAGGCGTGACGCACGGAAACGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000428099.6 ENST00000601386.5 |
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| CDS TCA 72 bp | GCCTGCTGTCTTGTCCATTCGAGAAATCTTCAGGTTTaGTGCCCCCGGAGATTTGCTGTCATGGATGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ACCLVHSRNLQV*CPRRFAVMDGL Trigger: CAGCCCATCCATGACAGCAAATCTCCGGGGGCATCAAACCTGAAGATTTCTCGAATGGACAAGACAGCAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 72 bp | GTGAACTGTTTGGAATCAGACACGTCCCCTCCTCGCTaGCGTTTCAGTTGCAGAAACACTGTTACAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: VNCLESDTSPPR*RFSCRNTVTGR Trigger: GCGGCCTGTAACAGTGTTTCTGCAACTGAAACGCAAGCGAGGAGGGGACGTGTCTGATTCCAAACAGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000189444.11 ENST00000336486.5 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS GCA 72 bp | GAATCAGACACGTCCCCTCCTCGCTTGCGTTTCAGTTaGAGAAACACTGTTACAGGCCGCTCAATCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: ESDTSPPRLRFS*RNTVTGRSIFI Trigger: GATGAAGATTGAGCGGCCTGTAACAGTGTTTCTGCAACTGAAACGCAAGCGAGGAGGGGACGTGTCTGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000189444.11 ENST00000336486.5 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CCA 72 bp | GTCACTGTGTGTTACCAGGTCCACCTCGATCTTGGCTaGTCCCTCGTAGTTACAGATCTTGACAGTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: VTVCYQVHLDLG*SLVVTDLDSGI Trigger: TATCCCACTGTCAAGATCTGTAACTACGAGGGACCAGCCAAGATCGAGGTGGACCTGGTAACACACAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000471698.6 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 72 bp | AGCCTGCTGTCTTGTCCATTCGAGAAATCTTCAGGTTaGATGCCCCCGGAGATTTGCTGTCATGGATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLLSCPFEKSSG*MPPEICCHGWA Trigger: AGCCCATCCATGACAGCAAATCTCCGGGGGCATCAAACCTGAAGATTTCTCGAATGGACAAGACAGCAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 72 bp | GGAATCAGACACGTCCCCTCCTCGCTTGCGTTTCAGTaGCAGAAACACTGTTACAGGCCGCTCAATCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GIRHVPSSLAFQ*QKHCYRPLNLH Trigger: ATGAAGATTGAGCGGCCTGTAACAGTGTTTCTGCAACTGAAACGCAAGCGAGGAGGGGACGTGTCTGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000189444.11 ENST00000336486.5 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 90 bp | GAACTGTTTGGAATCAGACACGTCCCCTCCTCGCTTGCGTTTCAGTaGCAGAAACACTGTTACAGGCCGCTCAATCTTCATCTTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: ELFGIRHVPSSLAFQ*QKHCYRPLNLHLVI Trigger: TATCACAAGATGAAGATTGAGCGGCCTGTAACAGTGTTTCTGCAACTGAAACGCAAGCGAGGAGGGGACGTGTCTGATTCCAAACAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000189444.11 ENST00000336486.5 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000652277.1 ENST00000661543.1 |
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| CDS CAA 72 bp | GCTGGCTCCTTGGGTTCCACAATGGAGGAGTTCAATTaGAAATCATCATATTCAATAATACCATCCAGACCT | + |
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Preference number: 6 (lower is better) Translates to: AGSLGSTMEEFN*KSSYSIIPSRP Trigger: AGGTCTGGATGGTATTATTGAATATGATGATTTCAAATTGAACTCCTCCATTGTGGAACCCAAGGAGCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000189444.11 ENST00000369966.8 ENST00000428099.6 ENST00000467116.5 ENST00000471698.6 ENST00000652277.1 ENST00000661543.1 |
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