RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFIX (Homo sapiens)

Ensembl gene IDs: ENSG00000008441

Ensembl transcript IDs: ENST00000358552.7, ENST00000360105.8, ENST00000397661.6, ENST00000585382.5, ENST00000586797.5, ENST00000586873.1, ENST00000587260.1, ENST00000587760.5, ENST00000588680.1, ENST00000590027.1, ENST00000592199.6

Found 847 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTaGGAACAAGGCACTAGGTCGGCCGGCCAGCGCGGGGGCGGGTGT +
Preference number: 1 (lower is better)
Translates to: PSGTQSAASAPPARG*EQGTRSAGQRGGGC
Trigger: ACACCCGCCCCCGCGCTGGCCGGCCGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 90 bp TTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTaGTCGGGCGCACGGATCTCCCGGGAGGGGCCGAAGCGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: LFDGTGGLCGPRCWC*SGARISREGPKRGW
Trigger: CCAGCCCCGCTTCGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR TCA 90 bp CTGGGTAGCAGGCACCGTTCGCCTGCCGCTACGGCCCCAGGTCGCTaGCCTCCTCCCCTCCCGTCACTCCCTCCTCTTCCCTCCCTCCGC +
Preference number: 1 (lower is better)
Translates to: LGSRHRSPAATAPGR*PPPLPSLPPLPSLR
Trigger: GCGGAGGGAGGGAAGAGGAGGGAGTGACGGGAGGGGAGGAGGTCAGCGACCTGGGGCCGTAGCGGCAGGCGAACGGTGCCTGCTACCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR GCA 90 bp AACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTaGTGGTCGGGCGCACGGATCTCCCGGGAGGGGCCGAAGCGGGGC +
Preference number: 1 (lower is better)
Translates to: NLFDGTGGLCGPRCW*WSGARISREGPKRG
Trigger: GCCCCGCTTCGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 90 bp GTGCGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTGGCTaGTCCTGTCCTGGAGCGTCGAGCCTTCCCGGTGTTCCCCGGAGG +
Preference number: 1 (lower is better)
Translates to: VRAGAGLGKSTCQRG*SCPGASSLPGVPRR
Trigger: CCTCCGGGGAACACCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 90 bp GTGCGTGCGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTaGCTGGTCCTGTCCTGGAGCGTCGAGCCTTCCCGGTGTTCCCCG +
Preference number: 1 (lower is better)
Translates to: VRACGRGPGQIDLSA*LVLSWSVEPSRCSP
Trigger: CGGGGAACACCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR GCA 90 bp TGGCCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTaGCCTGGCCGCTACCGTTGGGCTGTCCGGTGGCCTGGCCCGAGC +
Preference number: 1 (lower is better)
Translates to: WPLEAAAVAKMTPGL*PGRYRWAVRWPGPS
Trigger: GCTCGGGCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CCA 90 bp CTCCCCCTCCTGGTCGGGAGCAGCTGGGGGAAGAAGCTGGAGCCTTaGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCGGAGTCT +
Preference number: 1 (lower is better)
Translates to: LPLLVGSSWGKKLEP*QRGREGGREGRAES
Trigger: AGACTCCGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCCCCCAGCTGCTCCCGACCAGGAGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CCA 90 bp AGGCTGCTCTCCCCCTCCTGGTCGGGAGCAGCTGGGGGAAGAAGCTaGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: RLLSPSWSGAAGGRS*SLGREGGREGGREG
Trigger: CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CCA 90 bp AGAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTaGTGCTGGTCGGGCGCACGGATCTCCCGGGAGGGGCCGAAGCGG +
Preference number: 1 (lower is better)
Translates to: RNLFDGTGGLCGPRC*CWSGARISREGPKR
Trigger: CCGCTTCGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 90 bp CCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTaGGCCGGACAGGGAGCCCCTTCTGCTTCGCTCTCAGCTCTGACC +
Preference number: 1 (lower is better)
Translates to: PTEPEPSTVVEGKGT*AGQGAPSASLSALT
Trigger: GGTCAGAGCTGAGAGCGAAGCAGAAGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR TCA 90 bp CGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCAC +
Preference number: 1 (lower is better)
Translates to: RARLLDDGRGGEVQG*CCGPGAPWSDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR GCA 90 bp AGAAGAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATaGTGGTGCTGGTCGGGCGCACGGATCTCCCGGGAGGGGCCGAAG +
Preference number: 1 (lower is better)
Translates to: RRNLFDGTGGLCGPR*WCWSGARISREGPK
Trigger: CTTCGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR GCA 90 bp CCGGGCCTGCATCCACATCGTTGGGCCACCCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGCCTGTCCCGGGATAGAACACGTCAT +
Preference number: 1 (lower is better)
Translates to: PGLHPHRWATRWTGC*QLLGNGLSRDRTRH
Trigger: ATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR GCA 90 bp AAGCCGGGCCTGCATCCACATCGTTGGGCCACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAACGGCCTGTCCCGGGATAGAACACGT +
Preference number: 1 (lower is better)
Translates to: KPGLHPHRWATRWTG*CQLLGNGLSRDRTR
Trigger: ACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR CCA 90 bp GCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTaGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: AERAPDNAGEGQVGV*LKEGRSGRRGREGG
Trigger: CCCTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR GCA 90 bp TGCATCCACATCGTTGGGCCACCCGCTGGACTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCCGGGATAGAACACGTCATCAACAGG +
Preference number: 1 (lower is better)
Translates to: CIHIVGPPAGLAAAS*WGTACPGIEHVINR
Trigger: CCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR TCA 90 bp CTGGCCCGAGCCATCCGAGCACACAAACTGCACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTGGTGGTAGCGGATGGTCGGGTGCGT +
Preference number: 1 (lower is better)
Translates to: LARAIRAHKLHKLLQ*VLPVVVVVADGRVR
Trigger: ACGCACCCGACCATCCGCTACCACCACCACCACGGGCAGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR GCA 90 bp TTTCTTAGCCTAAGAAGAAACTTGTTTGACGGGACGGGCGGCCTTTaGGGTCCGCGATGCTGGTGCTGGTCGGGCGCACGGATCTCCCGG +
Preference number: 1 (lower is better)
Translates to: FLSLRRNLFDGTGGL*GPRCWCWSGARISR
Trigger: CCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCTAAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR TCA 90 bp ACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTaGCAAACCGGTTGGCAGAGGAGGCGCCTGTCGTTGCGAATGAAG +
Preference number: 1 (lower is better)
Translates to: TAVGCSESCRPGVRC*QTGWQRRRLSLRMK
Trigger: CTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR GCA 90 bp CTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTaGTTGGCTGCTGGTGCACAGCTCCACCGAGACCCCTTCCAAGGG +
Preference number: 1 (lower is better)
Translates to: LSVLYLTESMSRVSF*LAAGAQLHRDPFQG
Trigger: CCCTTGGAAGGGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CCA 90 bp AGCCAGATAAAGATCCAGTTCTTTGATTGTGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGGGTTCGAGCACTGAGGCGACTTGTA +
Preference number: 1 (lower is better)
Translates to: SQIKIQFFDCDSNVM*LDAQAGVRALRRLV
Trigger: TACAAGTCGCCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR TCA 90 bp GGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTaGCAGAGTCCATGTCGCGTGTTTCTTTCTGCTTGGCTGCTGGTG +
Preference number: 1 (lower is better)
Translates to: GGRQFCILSCFLSST*QSPCRVFLSAWLLV
Trigger: CACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CCA 90 bp CTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCCGGAGTGTGGACAAAG +
Preference number: 1 (lower is better)
Translates to: LKCPLGSGLMSASPC*FELSDCPDSGVWTK
Trigger: CTTTGTCCACACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR GCA 90 bp AAACTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGATTGTCCGGATTCCGGAGTGTGGACA +
Preference number: 1 (lower is better)
Translates to: KLKCPLGSGLMSASP*WFELSDCPDSGVWT
Trigger: TGTCCACACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR GCA 90 bp GGGGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTaGTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCA +
Preference number: 1 (lower is better)
Translates to: GESYFLWCVTKLFPS*SNGGGVPIPTAKDP
Trigger: TGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR TCA 90 bp GTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGTGGAAGGAGGGGAGGTaGTGGACCGCCGCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: VARGLPGLTPASTGSGWWWKEGR*WTAAPG
Trigger: CCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCA...CCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGCCCCAGGACTGCTCTTaGGGCTCAGGGTGGGGTGTC +
Preference number: 2 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSAPQDCS*GSGWGV
Trigger: GACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGG...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp GTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGCCATGCGCGGGGAGCTaGCCTGAGAGGAGAGGGCAC +
Preference number: 2 (lower is better)
Translates to: VARGLPGLTPASTGSGWWPCAGS*PERRGH
Trigger: GTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCATGG...CCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR CAA 90 bp CTGGCCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTaGCCCTGGCCGCTACCGTTGGGCTGTCCGGTGGCCTGGCCCGAG +
Preference number: 2 (lower is better)
Translates to: LATGGGGGSKNDPGT*PWPLPLGCPVAWPE
Trigger: CTCGGGCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR GCA 90 bp GACCTGGGGCCCGACTCCCCTCCCTCGTGGCAGGAAGGAGGCCCTCCTGGCCTGCTGCTTGGCTGCTGGTaGACAGCTCCACCGAGACCC +
Preference number: 2 (lower is better)
Translates to: DLGPDSPPSWQEGGPPGLLLGCW*TAPPRP
Trigger: GGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAG...CAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp CTGCCTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: LPGPPRSAPGSPFCSTLRGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...CCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACGGGCCTGTCCCAGGCTaGGACGAGGCCGTCGAGAGC +
Preference number: 2 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNGPVPG*DEAVES
Trigger: GCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCC...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CAA 90 bp TCTCCCCCTCCTGGTCGGGAGCAGCTGGGGGAAGAAGCTGGAGCCTaGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCGGAGTC +
Preference number: 2 (lower is better)
Translates to: SPPPGREQLGEEAGA*AEREGGREGGKGGV
Trigger: GACTCCGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCCCCCAGCTGCTCCCGACCAGGAGGGGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR TCA 90 bp GTCCCGGGGTCCGATGCTGACAAACCGGTTGGCAGAGGAGGCGCCTGTCGTTGCTGGAAGGAGGGGAGGTaGTGGACCGCCGCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: VPGSDADKPVGRGGACRCWKEGR*WTAAPG
Trigger: CCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCA...GCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR GCA 90 bp GAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGACAGGGAGCCCCTGGGGTAAGTGGAGGCTaGTCTCCCCCTCCTGGTCGG +
Preference number: 2 (lower is better)
Translates to: EPSTVVEGKGTWAGQGAPGVSGG*SPPPGR
Trigger: CCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCC...AGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp TGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 2 (lower is better)
Translates to: CCGPGAPWSDSSKHRQRVTRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...CACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp CCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCCCTGGCCGCCCATGCGCGGGGAGCTaGCCTGAGAGGAGAGGGCAC +
Preference number: 2 (lower is better)
Translates to: PLEAAAVAKMTPGLCPGRPCAGS*PERRGH
Trigger: GTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCATGG...GCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp GAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGACAGGGAGCCCCTGACTCCCCTCCCTCGTaGCAGGAAGGAGGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: EPSTVVEGKGTWAGQGAPDSPPS*QEGGPP
Trigger: AGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTC...AGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCTGCTTGGCTGCTGGTaGACAGCTCCACCGAGACCC +
Preference number: 2 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRLLGCW*TAPPRP
Trigger: GGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAG...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR GCA 90 bp GAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGTAGCCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 2 (lower is better)
Translates to: ESGIGRGTGLATGGGGGSRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...GCTACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGGGAAGGAGGCCCTCCTaGCCTGCAGAGAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRGRRPS*PAERGE
Trigger: TTCCCCTCTCTCTGCAGGCCAGGAGGGCCTCCTTCC...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGCCTAAGCGCAGGTGGTaGCTTAGCGCGGCAGCGGCG +
Preference number: 2 (lower is better)
Translates to: KLASGSKKGARGGEGGREPKRRW*LSAAAA
Trigger: CGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGG...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp GAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGTAGCACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 2 (lower is better)
Translates to: ESGIGRGTGLATGGGGGSTRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...GCTACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp GTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGTCTTGCGGCTCAGGGTaGGGTGTCAGAACACCCTCC +
Preference number: 2 (lower is better)
Translates to: VPQSPSPRLSSRERARGPSCGSG*GVRTPS
Trigger: GGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGA...CGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCCTACCTAAGCGCAGGTaGTGGCTTAGCGCGGCAGCG +
Preference number: 2 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWALPKRR*WLSAAA
Trigger: CGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAG...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp GTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 2 (lower is better)
Translates to: VARGLPGLTPASTGSGWWPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...CCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp CTGGACGCACAGGCCGGGGTTCGAGCACTGAGGCGACTTGTAGAGCCGCTCCCCACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LDAQAGVRALRRLVEPLPTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...GGGGAGCGGCTCTACAAGTCGCCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGGAACACCCTCCATTCTaGGACACGCAACTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPEHPPF*DTQLAP
Trigger: TGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTC...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCCTTGTGGCTTCCAGCTaGGTAGCAGGCACCGTTCGC +
Preference number: 2 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWALVASS*VAGTVR
Trigger: GCGAACGGTGCCTGCTACCCAGCTGGAAGCCACAAG...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCAAGAAGCTGGAGCCTTaGCAGAGAGGGAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWAKKLEP*QRGREG
Trigger: TCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTT...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACCTTTTAGCCCAAGGGTaGGGTGGGGTAAGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNLLAQG*GGVSGG
Trigger: GCCTCCACTTACCCCACCCCACCCTTGGGCTAAAAG...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: RMVGCVKYGLDCWMMDVEGPGAP*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp ACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: TGLSISLSSMDLGRLVVLAGLML*PGGSLV
Trigger: GACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR CAA 90 bp GATGGAGGAGTCAAGGCGGCGCCGTCTGGGGCAGTGCTGGTGGATTaGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGC +
Preference number: 2 (lower is better)
Translates to: DGGVKAAPSGAVLVD*ESGIGRGTGLATGG
Trigger: GCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTGACTCCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR TCA 90 bp CTGGACGCACAGGCCGGGGTTCGAGCACTGAGGCGACTTGTAGAGCCGCTCCCCGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 2 (lower is better)
Translates to: LDAQAGVRALRRLVEPLPGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...GGGGAGCGGCTCTACAAGTCGCCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR GCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGCTGCTTGGCTGCTGGTaGACAGCTCCACCGAGACCC +
Preference number: 2 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRLLGCW*TAPPRP
Trigger: GGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAG...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR GCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGGGGTAAGTGGAGGCTaGTCTCCCCCTCCTGGTCGG +
Preference number: 2 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGGVSGG*SPPPGR
Trigger: CCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR GCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTCCGGGGTCCCCTTTCTaGTCCACCCTCCGGCCCGGC +
Preference number: 2 (lower is better)
Translates to: TNLLSALLIMLVRVKLASPGSPF*STLRPG
Trigger: GCCGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGG...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp TGCTGGGGAACGGCCTGTCCCGGGATAGAACACGTCATCAACAGGGCTCTCCATCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: CWGTACPGIEHVINRALHLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...ATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp ACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: TGLSISLSSMDLGRLVVLLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp TTTGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGCACACCTTGTCAGCCTaGCGCAGGCAGTCAATCCGC +
Preference number: 2 (lower is better)
Translates to: FGIRHRKGHRSGHWRRRRHTLSA*RRQSIR
Trigger: GCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGTG...CCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp TCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGAGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGG +
Preference number: 2 (lower is better)
Translates to: SDSSKHRQRVVGESHARGDSNVM*LDAQAG
Trigger: CCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTC...TCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CAA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTaGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TNLLSALLIMLVRVK*ASGSKKGARGGEGG
Trigger: CCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR TCA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 2 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLEGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR TCA 90 bp GCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGGCTCGACTGCTGGATaGTGGACGTGGAGGGGAAGT +
Preference number: 2 (lower is better)
Translates to: APWSDSSKHRQRVVGESHGSTAG*WTWRGS
Trigger: ACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCC...ATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCTGCTTGGCTGCTGGTaGACAGCTCCACCGAGACCC +
Preference number: 2 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGLLGCW*TAPPRP
Trigger: GGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAG...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGGGGGTAAGTGGAGGCTaGTCTCCCCCTCCTGGTCGG +
Preference number: 2 (lower is better)
Translates to: PGARRCPVPLNSTKKGYAGVSGG*SPPPGR
Trigger: CCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCC...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGCCCCACATCTCCTGTTaGCCTCATTGCCCCTCACAA +
Preference number: 2 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRPHISC*PHCPSQ
Trigger: TTGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGG...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp ACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGAGCTGGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 2 (lower is better)
Translates to: TPASTGSGWWVKAMRGELERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...CAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGTCTTGCGGCTCAGGGTaGGGTGTCAGAACACCCTCC +
Preference number: 2 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRSCGSG*GVRTPS
Trigger: GGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGA...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp AATGCTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAACAAAAGCCGCCCCTaGAGCCAGCCACCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: NAGEGQVGVWLKEGRSGRNKSRP*SQPPCG
Trigger: GCCACAAGGTGGCTGGCTCCAGGGGCGGCTTTTGTT...CCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTGTACCCGGACGGGGATaGGGCGAGGAGGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: TNLLSALLIMLVRVKLASVPGRG*GEEGCW
Trigger: CCAGCACCCCTCCTCGCCCCATCCCCGTCCGGGTAC...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp TCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGATGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SDSSKHRQRVVGESHARGCHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...TCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp CGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGCTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 2 (lower is better)
Translates to: RVREIRARLLDDGRGGEVLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...CACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp AACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: NRALHLTVIDGLGALGGAGPGAP*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...AGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR TCA 90 bp AATGCTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAAAATCATTGCACTTTaGCCGCGCGTCACGCCCGGC +
Preference number: 2 (lower is better)
Translates to: NAGEGQVGVWLKEGRSGRKIIAL*PRVTPG
Trigger: GCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTT...CCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR TCA 90 bp TCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGAGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 2 (lower is better)
Translates to: SDSSKHRQRVVGESHARGGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...TCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCAGAGGATCCTGACCTGTaGTTTGTGTTTTCATACAAT +
Preference number: 2 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAEDPDL*FVFSYN
Trigger: ATTGTATGAAAACACAAAGCACAGGTCAGGATCCTC...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp ACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACAGTCCTGGCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 2 (lower is better)
Translates to: TLTSSVTFQTPEVTKQSWRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...CCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp CCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 2 (lower is better)
Translates to: PGLTPASTGSGWWVKAMRERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp GCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 2 (lower is better)
Translates to: APWSDSSKHRQRVVGESHPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...ATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp TCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGATCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: SDSSKHRQRVVGESHARGSHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...TCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR TCA 90 bp CAGGTCTGGCCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 2 (lower is better)
Translates to: QVWPLEAAAVAKMTPGLCCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...GCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR GCA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGAAATTGTTCCCAAGTTaGTCAAATGGAGGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSAKLFPS*SNGGGV
Trigger: AACTCCTCCTCCATTTGAGCAACTTGGGAACAATTT...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp CCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 2 (lower is better)
Translates to: PGLTPASTGSGWWVKAMRKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp TTGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGTAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 2 (lower is better)
Translates to: LESGIGRGTGLATGGGGGKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...ACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCAAGAAGCTGGAGCCTTaGCAGAGAGGGAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPKKLEP*QRGREG
Trigger: TCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTT...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RMVGCVKYGLDCWMMDVECHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 2 (lower is better)
Translates to: RMVGCVKYGLDCWMMDVEVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR TCA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACGCTCCAAAACACTTTTaGAAAGGACGACACCCAACA +
Preference number: 2 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNAPKHF*KGRHPT
Trigger: TGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGC...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACGAACTGAAAAATCATTaGACTTTGACCGCGCGTCAC +
Preference number: 2 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNELKNH*TLTARH
Trigger: GTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGTTTCTGCTTGGCTGCTaGTGCACAGCTCCACCGAGA +
Preference number: 2 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRFLLGC*CTAPPR
Trigger: TCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAA...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGAAGAAGCTGGAGCCTTaGCAGAGAGGGAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: PGARRCPVPLNSTKKGYAKKLEP*QRGREG
Trigger: TCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTT...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGGCCACAGCACAGGCAGCGGGTaGTGGGTGAAAGCCATGCGC +
Preference number: 2 (lower is better)
Translates to: SFPDFFREAGPASTSLGHSTGSG*WVKAMR
Trigger: GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCT...GTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR CAA 90 bp ATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTCGTTGCGAATGAAGGTGATGGAGGA +
Preference number: 2 (lower is better)
Translates to: MFRKLPSRGPMLTNR*AEEAPVVANEGDGG
Trigger: TCCTCCATCACCTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR TCA 90 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 2 (lower is better)
Translates to: RMVGCVKYGLDCWMMDVECNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR TCA 90 bp TGCTGGGGAACGGCCTGTCCCGGGATAGAACACGTCATCAACAGGGCTCTCCATCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: CWGTACPGIEHVINRALHPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...ATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGGCCCCTTCAGAATTGTaGTGGTTGCTTTGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRAPSEL*WLLCLG
Trigger: CCCCAAACAAAGCAACCAGCACAATTCTGAAGGGGC...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR GCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGCGGAGCGAGGGCACCTaGATGCAGGGCTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWRSEGT*MQGWGR
Trigger: CCGCCCCCAGCCCTGCATGCAGGTGCCCTCGCTCCG...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp GAACTGAAAAATCATTGCACTTTGACCGCGCGTCACGCCCGGCCCACCCGGCCCGCTGGTTGCTTTGTTTaGGGACTTTGTTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: ELKNHCTLTARHARPTRPAGCFV*GLCSFP
Trigger: GGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGC...GGGCCGGGTGGGCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGCTGGTTGCTTTGTTTaGGGACTTTGTTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWAGCFV*GLCSFP
Trigger: GGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGC...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAATCATCTTTACAAGCTaGCCCTCCAGGCTCCCTAGG +
Preference number: 2 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGIIFTS*PSRLPR
Trigger: CCTAGGGAGCCTGGAGGGCCAGCTTGTAAAGATGAT...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CAA 90 bp TCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTaGGCTGCTGGTGCACAGCTCCACCGAGACCCCTTCCAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: SVLYLTESMSRVSFC*AAGAQLHRDPFQGL
Trigger: GAGCCCTTGGAAGGGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR TCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGTTTCTGTCCTCTACTTaGCAGAGTCCATGTCGCGTG +
Preference number: 2 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRFLSST*QSPCRV
Trigger: CACGCGACATGGACTCTGTCAAGTAGAGGACAGAAA...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR TCA 90 bp TCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: STGLSISLSSMDLGRLVVPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...CACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR GCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGAACTGAAAAATCATTaGACTTTGACCGCGCGTCAC +
Preference number: 2 (lower is better)
Translates to: LVRVKLASGSKKGARGGEELKNH*TLTARH
Trigger: GTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp TCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SVILSPAPSHSRPRKSQNTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...GTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CCA 90 bp CAGGTCTGGCCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 2 (lower is better)
Translates to: QVWPLEAAAVAKMTPGLCVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...GCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR TCA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGTTAAACTCTAAAATGTaGACGTTTCCTTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: KLASGSKKGARGGEGGRELNSKM*TFPSAL
Trigger: GAGGGCTGAAGGAAACGTTCACATTTTAGAGTTTAA...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR TCA 90 bp GACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTGACAAACATTGTGACTCCAATGTaGTGTGGCTGGACGCACAGG +
Preference number: 2 (lower is better)
Translates to: DCCGMFRKLPSRGPMLTNIVTPM*CGWTHR
Trigger: CCTGTGCGTCCAGCCACATCACATTGGAGTCACAAT...GTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTGCTGGTTGCTTTGTTTaGGGACTTTGTTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLAGCFV*GLCSFP
Trigger: GGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGC...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp TTTGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 2 (lower is better)
Translates to: FGIRHRKGHRSGHWRRRRSASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...CCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEEGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTATCATCTTTACAAGCTaGCCCTCCAGGCTCCCTAGG +
Preference number: 2 (lower is better)
Translates to: TNLLSALLIMLVRVKLASIIFTS*PSRLPR
Trigger: CCTAGGGAGCCTGGAGGGCCAGCTTGTAAAGATGAT...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATCTGCTCTCCCCCTCCTaGTCGGGAGCAGCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNLLSPS*SGAAGG
Trigger: TCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAG...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp AATGCTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGGAGAGCTACTTCCTGTaGTGTGTTACCAAATTGTTC +
Preference number: 2 (lower is better)
Translates to: NAGEGQVGVWLKEGRSGRESYFL*CVTKLF
Trigger: GAACAATTTGGTAACACACCACAGGAAGTAGCTCTC...CCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR TCA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGGCTCCAAAACACTTTTaGAAAGGACGACACCCAACA +
Preference number: 2 (lower is better)
Translates to: PGARRCPVPLNSTKKGYAAPKHF*KGRHPT
Trigger: TGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGC...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR GCA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAACCCCAGGACTGCTCTTaGGGCTCAGGGTGGGGTGTC +
Preference number: 2 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNEPQDCS*GSGWGV
Trigger: GACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGG...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGACTCCCCTCCCTCGTaGCAGGAAGGAGGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNDSPPS*QEGGPP
Trigger: AGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTC...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR TCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGACCCTCCCAAGGAACTaGAAGTCGGCGAGCAGGACG +
Preference number: 2 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWTLPRN*KSASRT
Trigger: CGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGT...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGTCTTGCGGCTCAGGGTaGGGTGTCAGAACACCCTCC +
Preference number: 2 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEESCGSG*GVRTPS
Trigger: GGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGA...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGGAAGGAGGCCCTCCTaGCCTGCAGAGAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNGRRPS*PAERGE
Trigger: TTCCCCTCTCTCTGCAGGCCAGGAGGGCCTCCTTCC...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CAA 90 bp GGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTaGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTGGCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: GRKAVLHPFLLSVLY*TESMSRVSFCLAAG
Trigger: ACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CAA 90 bp ATAGAGATACTCGTATATACTGCGTTTCTTAGCCTAAGAAGAAACTaGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: IEILVYTAFLSLRRN*FDGTGGLCGPRCWC
Trigger: GCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCTAAGAAACGCAGTATATACGAGTATCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR TCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 2 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLEGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR GCA 90 bp GACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTGACAAACATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGAT +
Preference number: 2 (lower is better)
Translates to: DCCGMFRKLPSRGPMLTNMSASP*WFELSD
Trigger: ATCAGATAGTTCAAACCAGCAAGGAGATGCGGACAT...GTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CAA 90 bp GGGGGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTaGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCC +
Preference number: 2 (lower is better)
Translates to: GGELLPVVCYQIVPK*LKWRRSSHSNSKRP
Trigger: GGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR TCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 2 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQEGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR GCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTGAGGATCCTGACCTGTaGTTTGTGTTTTCATACAAT +
Preference number: 2 (lower is better)
Translates to: TNLLSALLIMLVRVKLASEDPDL*FVFSYN
Trigger: ATTGTATGAAAACACAAAGCACAGGTCAGGATCCTC...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGATCATCTTTACAAGCTaGCCCTCCAGGCTCCCTAGG +
Preference number: 2 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWIIFTS*PSRLPR
Trigger: CCTAGGGAGCCTGGAGGGCCAGCTTGTAAAGATGAT...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR TCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 2 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEEEGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAACACCCTCCATTCTaGGACACGCAACTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNEHPPF*DTQLAP
Trigger: TGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTC...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CAA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTaGTGTTTTCATACAATTAAGAAAGAGAGAGAAAGAGAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: RGAMLIFSQRILTCA*CFHTIKKERERERH
Trigger: GTGCCTCTCTCTTTCTCTCTCTTTCTTAATTGTATGAAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR GCA 72 bp GACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTaGTGGTCGGGCGCACGGATCTCCCGGGAGGGGCCG +
Preference number: 3 (lower is better)
Translates to: DGTGGLCGPRCW*WSGARISREGP
Trigger: CGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR TCA 72 bp ACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTaGGAACAAGGCACTAGGTCGGCCGGCCAGCGCGGG +
Preference number: 3 (lower is better)
Translates to: TQSAASAPPARG*EQGTRSAGQRG
Trigger: CCCGCGCTGGCCGGCCGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp GGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTaGTCGGGCGCACGGATCTCCCGGGAGGGGCCGAAG +
Preference number: 3 (lower is better)
Translates to: GTGGLCGPRCWC*SGARISREGPK
Trigger: CTTCGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp TTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTaGTGCTGGTCGGGCGCACGGATCTCCCGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: FDGTGGLCGPRC*CWSGARISREG
Trigger: CCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp AGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTaGCTTAGCGCGGCAGCGGCGGCTGCCTGGTCCTCC +
Preference number: 3 (lower is better)
Translates to: SRRAGRLPKRRW*LSAAAAAAWSS
Trigger: GGAGGACCAGGCAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CCA 72 bp TGCGGGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTaGCTGGTCCTGTCCTGGAGCGTCGAGCCTTCCCGG +
Preference number: 3 (lower is better)
Translates to: CGRGPGQIDLSA*LVLSWSVEPSR
Trigger: CCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCCCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp GTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGCCCCAGGACTGCTCTaGCGGCTCAGGGTGGGGTGT +
Preference number: 3 (lower is better)
Translates to: VPQSPSPRLSSRERARGPAPGLL*RLRVGC
Trigger: ACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGGC...CGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR GCA 72 bp TTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATaGTGGTGCTGGTCGGGCGCACGGATCTCCCGGGAG +
Preference number: 3 (lower is better)
Translates to: LFDGTGGLCGPR*WCWSGARISRE
Trigger: CTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp AAGCCGGGCCTGCATCCACATCGTTGGGCCACCCGCTaGACTGGCTGCTGCCAGCTGCTGGGGAACGGCCTG +
Preference number: 3 (lower is better)
Translates to: KPGLHPHRWATR*TGCCQLLGNGL
Trigger: CAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR CCA 72 bp GGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCCCTaGCCGCTACCGTTGGGCTGTCCGGTGGCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: GGGSKNDPGTLP*PLPLGCPVAWP
Trigger: GGGCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CAA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGGTTTGTTCGTTGGCATaGACCTCTGCGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWVCSLA*TSAGEG
Trigger: CCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAAC...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACTGGTGAGGGTCAAGTaGGCGTCTGGCTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: SEPPGPSGTQSAASAPPALVRVK*ASGSKK
Trigger: CTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR GCA 72 bp GAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTaGCCTGGCCGCTACCGTTGGGCTGTCCGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: EAAAVAKMTPGL*PGRYRWAVRWP
Trigger: AGGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CCA 72 bp CCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTaGGCCGGACAGGGAGCCCCTTCTGCTTCGCTCTCA +
Preference number: 3 (lower is better)
Translates to: PEPSTVVEGKGT*AGQGAPSASLS
Trigger: TGAGAGCGAAGCAGAAGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp GGGCAAATCGACCTGTCAGCGTGGCTGGTCCTGTCCTaGAGCGTCGAGCCTTCCCGGTGTTCCCCGGAGGGG +
Preference number: 3 (lower is better)
Translates to: GQIDLSAWLVLS*SVEPSRCSPEG
Trigger: CCCCTCCGGGGAACACCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCACGCTGACAGGTCGATTTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp GGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTGGCTaGTCCTGTCCTGGAGCGTCGAGCCTTCCCGGTGTT +
Preference number: 3 (lower is better)
Translates to: GAGLGKSTCQRG*SCPGASSLPGV
Trigger: AACACCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp TGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGTCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 3 (lower is better)
Translates to: CCGPGAPWSDSSKHRQRVSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...CACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR TCA 72 bp CTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCC +
Preference number: 3 (lower is better)
Translates to: LLDDGRGGEVQG*CCGPGAPWSDS
Trigger: GGAGTCAGACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR GCA 72 bp CATCCACATCGTTGGGCCACCCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGCCTGTCCCGGGATAGA +
Preference number: 3 (lower is better)
Translates to: HPHRWATRWTGC*QLLGNGLSRDR
Trigger: TCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CAA 90 bp GTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGAAAAATCATTGCACTTaGACCGCGCGTCACGCCCGG +
Preference number: 3 (lower is better)
Translates to: VPQSPSPRLSSRERARGPKNHCT*TARHAR
Trigger: CCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTT...CGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp GAAGGTGATGGAGGAGTCAAGGCGGCGCCGTCTGGGGCAGTGCTGGTGGATTTGCCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 3 (lower is better)
Translates to: EGDGGVKAAPSGAVLVDLPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...CAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTGACTCCTCCATCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR GCA 72 bp CTAAGAAGAAACTTGTTTGACGGGACGGGCGGCCTTTaGGGTCCGCGATGCTGGTGCTGGTCGGGCGCACGG +
Preference number: 3 (lower is better)
Translates to: LRRNLFDGTGGL*GPRCWCWSGAR
Trigger: CCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp GACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATGCTGTGGCCCGGATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 3 (lower is better)
Translates to: DCWMMDVEGKCRADAVARMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...CCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CAA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCGAAGAAGCTGGAGCCTaGGCAGAGAGGGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPEEAGA*AEREGG
Trigger: CCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CAA 90 bp CTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCGAACTGAAAAATCATaGCACTTTGACCGCGCGTCA +
Preference number: 3 (lower is better)
Translates to: LWDPERGVRSASTGVRTRRTEKS*HFDRAS
Trigger: TGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTCG...CCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp CCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: PGLTPASTGSGWWVKAMRPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CCA 72 bp GCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTaGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: APDNAGEGQVGV*LKEGRSGRRGR
Trigger: CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATTATCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGGAAGAAGCTGGAGCCTaGGCAGAGAGGGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: PGARRCPVPLNSTKKGYAEEAGA*AEREGG
Trigger: CCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp CGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGCTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 3 (lower is better)
Translates to: RVREIRARLLDDGRGGEVLSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...CACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CAA 90 bp AAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATCCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 3 (lower is better)
Translates to: KYGLDCWMMDVEGKCRADPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...ATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR CCA 72 bp CAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGGTGGAAGGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: QQGSPSHCHRWT*GAWWCWWKEGR
Trigger: CCTCCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR CCA 72 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTaGATGATGGACGTGGAGGGGAAGTGCAGGGCTGAT +
Preference number: 3 (lower is better)
Translates to: RMVGCVKYGLDC*MMDVEGKCRAD
Trigger: ATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CAA 90 bp GTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGAGCTCCAAAACACTTTaGAAAAGGACGACACCCAAC +
Preference number: 3 (lower is better)
Translates to: VPQSPSPRLSSRERARGPSSKTL*KRTTPN
Trigger: GTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCT...CGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGTGGTGTGTTACCAAATaGTTCCCAAGTTGCTCAAAT +
Preference number: 3 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSAWCVTK*FPSCSN
Trigger: ATTTGAGCAACTTGGGAACAATTTGGTAACACACCA...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp ACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 3 (lower is better)
Translates to: TGLSISLSSMDLGRLVVLMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CAA 90 bp GTCCCGGGGTCCGATGCTGACAAACCGGTTGGCAGAGGAGGCGCCTGTCGTTGCAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 3 (lower is better)
Translates to: VPGSDADKPVGRGGACRCKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...GCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CAA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGCTTTGTTTGGGGACTTaGTTCCTTCCCCAGAAGGCC +
Preference number: 3 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWLCLGT*FLPQKA
Trigger: GGCCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAG...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CAA 90 bp GACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTGACAAACTCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 3 (lower is better)
Translates to: DCCGMFRKLPSRGPMLTNSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...GTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CAA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTGTTTGTTCGTTGGCATaGACCTCTGCGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: TNLLSALLIMLVRVKLASVCSLA*TSAGEG
Trigger: CCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAAC...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 3 (lower is better)
Translates to: RMVGCVKYGLDCWMMDVEWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR GCA 72 bp CTCCTAACACGTCCCCACATCTCCTGTTGCCCTCATTaGCCCTCACAACACCACTTGGGAAAGGAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: LLTRPHISCCPH*PSQHHLGKEQP
Trigger: GGGCTGCTCCTTTCCCAAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGGACGTGTTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCTTTCTGTCCTCTACTaGACAGAGTCCATGTCGCGT +
Preference number: 3 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGLSVLY*TESMSR
Trigger: ACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAG...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp AAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 3 (lower is better)
Translates to: KYGLDCWMMDVEGKCRADWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...ATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
3UTR-3UTR CAA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 3 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp GGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCATTGTGCTGGTTGCTTaGTTTGGGGACTTTGTTCCT +
Preference number: 3 (lower is better)
Translates to: GVSEHPPFWDTQLAPGVTIVLVA*FGDFVP
Trigger: AGGAACAAAGTCCCCAAACAAAGCAACCAGCACAAT...GGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CAA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAATTGTGCTGGTTGCTTaGTTTGGGGACTTTGTTCCT +
Preference number: 3 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGIVLVA*FGDFVP
Trigger: AGGAACAAAGTCCCCAAACAAAGCAACCAGCACAAT...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR CCA 72 bp AAGATCCAGTTCTTTGATTGTGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGGGTTCGAGCACTGAGG +
Preference number: 3 (lower is better)
Translates to: KIQFFDCDSNVM*LDAQAGVRALR
Trigger: CCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CAA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 3 (lower is better)
Translates to: LVRVKLASGSKKGARGGEPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp CCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCCGGAGTG +
Preference number: 3 (lower is better)
Translates to: PLGSGLMSASPC*FELSDCPDSGV
Trigger: CACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CAA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAAGAAGAAGCTGGAGCCTaGGCAGAGAGGGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNEEEAGA*AEREGG
Trigger: CCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CAA 90 bp GAACTGAAAAATCATTGCACTTTGACCGCGCGTCACGCCCGGCCCACCCGGCCCATCCTGACCTGTGCTTaGTGTTTTCATACAATTAAG +
Preference number: 3 (lower is better)
Translates to: ELKNHCTLTARHARPTRPILTCA*CFHTIK
Trigger: CTTAATTGTATGAAAACACAAAGCACAGGTCAGGAT...GGGCCGGGTGGGCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR-3UTR CAA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTCAAATTGTTCCCAAGTaGCTCAAATGGAGGAGGAGT +
Preference number: 3 (lower is better)
Translates to: TNLLSALLIMLVRVKLASQIVPK*LKWRRS
Trigger: ACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTG...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp GTCACATTCCAGACCCCGGAAGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTGGGCAGTGGTTTGATG +
Preference number: 3 (lower is better)
Translates to: VTFQTPEVTKQS*KLKCPLGSGLM
Trigger: CATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR TCA 72 bp AGTCCTGGAAACTTAAGTGCCCGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCTGGTTTGAACTATCTG +
Preference number: 3 (lower is better)
Translates to: SPGNLSARWAVV*CPHLLAGLNYL
Trigger: CAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR-3UTR CAA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 3 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
3UTR CCA 72 bp GTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATaGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCC +
Preference number: 3 (lower is better)
Translates to: VVCYQIVPKLLK*RRSSHSNSKRP
Trigger: GGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CAA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGACCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 3 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR-3UTR CAA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAAAGCTCCAAAACACTTTaGAAAAGGACGACACCCAAC +
Preference number: 3 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNESSKTL*KRTTPN
Trigger: GTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCT...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
3UTR GCA 72 bp CTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATaGGTATTCCTAACAAGTGCAGGATATTTAATTGAT +
Preference number: 3 (lower is better)
Translates to: LSRSVKLNKEGI*VFLTSAGYLID
Trigger: ATCAATTAAATATCCTGCACTTGTTAGGAATACGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGCGGCCCGGGCCCAGCTaGCCTGCAGCTTCCGACCTC +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPRPGPS*PAASDL
Trigger: GAGGTCGGAAGCTGCAGGCCAGCTGGGCCCGGGCCG...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACCTGGCCGCTACCGTTaGGCTGTCCGGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAPGRYR*AVRWPG
Trigger: GCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGG...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR TCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGGGCAGGGGCAGGAACTaGTGGGGCGGAGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPGRGRN*WGGARA
Trigger: TGCCCTCGCTCCGCCCCATCAGTTCCTGCCCCTGCC...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GACCTGGGGCCCGACTCCCCTCCCTCGTGGCAGGAAGGAGGCCCTCCTGGCCTGGCAGCGGGTGGTGGGTaGAAGCCATGCGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DLGPDSPPSWQEGGPPGLAAGGG*KPCAGS
Trigger: GCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGC...CAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGCCGGGGTCCCCTTTCTaGTCCACCCTCCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWPGSPF*STLRPG
Trigger: GCCGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGG...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCAGGTCCGCGATGCTGGTaGTGGTCGGGCGCACGGATC +
Preference number: 4 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAGPRCW*WSGARI
Trigger: GATCCGTGCGCCCGACCAGCACCAGCATCGCGGACC...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCAACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SEPPGPSGTQSAASAPPATRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGGGGACGGGCGGCCTTTaGGGTCCGCGATGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LWDPERGVRSASTGVRTRGTGGL*GPRCWC
Trigger: GCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCC...CCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GACCTGGGGCCCGACTCCCCTCCCTCGTGGCAGGAAGGAGGCCCTCCTGGCCTGGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: DLGPDSPPSWQEGGPPGLAGLML*PGGSLH
Trigger: ATGCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...CAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR TCA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGTGGAAGGAGGGGAGGTaGTGGACCGCCGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLWKEGR*WTAAPG
Trigger: CCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCA...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGACGGCCCCAGGTCGCTaGCCTCCTCCCCTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLTAPGR*PPPLPS
Trigger: TGACGGGAGGGGAGGAGGTCAGCGACCTGGGGCCGT...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGCCTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCTGCTCTCCCCCTCCTaGTCGGGAGCAGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LPGPPRSAPGSPFCSTLRLLSPS*SGAAGG
Trigger: TCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAG...CCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGAGCAGAGGCGGGGCTaGGGTGCCCCTCGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWAEQRRG*GAPRAL
Trigger: GAGAGCCCGAGGGGCACCCCAGCCCCGCCTCTGCTC...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNGEVQG*CCGPGA
Trigger: AGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCC...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VPQSPSPRLSSRERARGPLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...CGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGGAGGGGAGCTGGGCGTaGTCATCCTCCCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLEGSWA*SSSPPS
Trigger: GGAGGGAGGGGAGGATGAGCACGCCCAGCTCCCCTC...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGCGGGCCCAGCTGGCCTaGAGCTTCCGACCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: KLASGSKKGARGGEGGRERAQLA*SFRPRP
Trigger: CGGGCGAGGTCGGAAGCTGCAGGCCAGCTGGGCCCG...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp TGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGCCATGCGCGGGGAGCTaGCCTGAGAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: CCGPGAPWSDSSKHRQRVPCAGS*PERRGH
Trigger: GTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCATGG...CACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGTGGCTGGTCCTGTCCTaGAGCGTCGAGCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWWLVLS*SVEPSR
Trigger: CCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCA...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: CCGPGAPWSDSSKHRQRVGPGAP*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...CACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGTGGAAGGAGGGGAGGTaGTGGACCGCCGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGWKEGR*WTAAPG
Trigger: CCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCA...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAHKLLQ*VLPVVV
Trigger: CACCACCACGGGCAGGACTCACTGAAGGAGTTTGTG...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCGGCAGGGGCAGGAACTaGTGGGGCGGAGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EEAGALAEREGGREGGKGGRGRN*WGGARA
Trigger: TGCCCTCGCTCCGCCCCATCAGTTCCTGCCCCTGCC...GCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGGAGTGGTGGGTCGTCTaGGCCACCCGGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGEWWVV*ATRPLW
Trigger: CCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTC...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCGCAGCGGGTGGTGGGTaGAAGCCATGCGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GAPWSDSSKHRQRVVGESAAGGG*KPCAGS
Trigger: GCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGC...GCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp CTGGACGCACAGGCCGGGGTTCGAGCACTGAGGCGACTTGTAGAGCCGCTCCCCCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LDAQAGVRALRRLVEPLPLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...GGGGAGCGGCTCTACAAGTCGCCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR GCA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGCTGCTTGGCTGCTGGTaGACAGCTCCACCGAGACCC +
Preference number: 4 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWLLGCW*TAPPRP
Trigger: GGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAG...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGCCGGGGTCCCCTTTCTaGTCCACCCTCCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGEPGSPF*STLRPG
Trigger: GCCGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGG...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCTCCCGCAGGATCCACTaGCCCTCAGCCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWASRRIH*PSALGS
Trigger: GGACCCCAGGGCTGAGGGGCAGTGGATCCTGCGGGA...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPDSNVM*LDAQAG
Trigger: CCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTC...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGCCTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPGPPRSAPGSPFCSTLRTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...CCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GACCTGGGGCCCGACTCCCCTCCCTCGTGGCAGGAAGGAGGCCCTCCTGGCCTGTCTTGCGGCTCAGGGTaGGGTGTCAGAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: DLGPDSPPSWQEGGPPGLSCGSG*GVRTPS
Trigger: GGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGA...CAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGGGAAGGAGGCCCTCCTaGCCTGCAGAGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LWDPERGVRSASTGVRTRGRRPS*PAERGE
Trigger: TTCCCCTCTCTCTGCAGGCCAGGAGGGCCTCCTTCC...CCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGACAGGCAGCGGGTGGTaGGTGAAAGCCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: CCGPGAPWSDSSKHRQRVTGSGW*VKAMRG
Trigger: CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGT...CACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGAGLML*PGGSLV
Trigger: GACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGCGTTGGGCTGTCCGGTaGCCTGGCCCGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GLTPASTGSGWWVKAMRGRWAVR*PGPSHP
Trigger: CGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACG...CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CAA 72 bp GGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTaGCCCTGGCCGCTACCGTTGGGCTGTCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GGGGGSKNDPGT*PWPLPLGCPVA
Trigger: GGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGGGGTCGGGGATAGGATaGGAGATGTTGAATGGGGGC +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPGSGIG*EMLNGG
Trigger: GCCCCCATTCAACATCTCTCATCCTATCCCCGACCC...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWATRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGGGATGTTCAGAAAGTTaGCGTCCCGGGGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPGCSES*RPGVRC
Trigger: GCATCGGACCCCGGGACGGCAACTTTCTGAACATCC...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGCGGAGCGAGGGCACCTaGATGCAGGGCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRRSEGT*MQGWGR
Trigger: CCGCCCCCAGCCCTGCATGCAGGTGCCCTCGCTCCG...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGCCGGGGTCCCCTTTCTaGTCCACCCTCCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWPGSPF*STLRPG
Trigger: GCCGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGG...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCCATGCGCGGGGAGCTaGCCTGAGAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGPCAGS*PERRGH
Trigger: GTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCATGG...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GACCTGGGGCCCGACTCCCCTCCCTCGTGGCAGGAAGGAGGCCCTCCTGGCCTGCTTTTAGCCCAAGGGTaGGGTGGGGTAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: DLGPDSPPSWQEGGPPGLLLAQG*GGVSGG
Trigger: GCCTCCACTTACCCCACCCCACCCTTGGGCTAAAAG...CAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGGCCTGTCCCAGGCTaGGACGAGGCCGTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGEGPVPG*DEAVES
Trigger: GCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCC...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCCTAAGCGCAGGTGGTaGCTTAGCGCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGPKRRW*LSAAAA
Trigger: CGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGG...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCCCTAAGCGCAGGTGGTaGCTTAGCGCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: EEAGALAEREGGREGGKGPKRRW*LSAAAA
Trigger: CGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGG...GCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCACTGCCCCTCAGCCCTaGGGTCCTCTAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWATAPQP*GPLGLH
Trigger: GTGCAGCCCTAGAGGACCCCAGGGCTGAGGGGCAGT...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAAAGGGCACGTaGGCCGGACAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGREGKGT*AGQGAP
Trigger: AGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTC...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGGACGCACAGGCCGGGGTTCGAGCACTGAGGCGACTTGTAGAGCCGCTCCCCACAGGCAGCGGGTGGTaGGTGAAAGCCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LDAQAGVRALRRLVEPLPTGSGW*VKAMRG
Trigger: CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGT...GGGGAGCGGCTCTACAAGTCGCCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp TTTGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: FGIRHRKGHRSGHWRRRRAGLML*PGGSLV
Trigger: GACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...CCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp GAAGGTGATGGAGGAGTCAAGGCGGCGCCGTCTGGGGCAGTGCTGGTGGATTTGTGGAAGGAGGGGAGGTaGTGGACCGCCGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EGDGGVKAAPSGAVLVDLWKEGR*WTAAPG
Trigger: CCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCA...CAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTGACTCCTCCATCACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWGEVQG*CCGPGA
Trigger: AGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCC...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGGTGGAAGGAGGGGAGGTGGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSSMDLGRLVVLVEGGEVGEVQG*CCGPGA
Trigger: AGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCC...CACCTCCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGGGCTCGACTGCTGGATaGTGGACGTGGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRGSTAG*WTWRGS
Trigger: ACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCC...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGACGGCCCCAGGTCGCTaGCCTCCTCCCCTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRTAPGR*PPPLPS
Trigger: TGACGGGAGGGGAGGAGGTCAGCGACCTGGGGCCGT...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCCGCCAGCACGGGGGTaGGAACAAGGCACTAGGTCG +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGPPARG*EQGTRS
Trigger: CGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGG...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGCAGCGGGTGGTGGGTaGAAGCCATGCGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWAAGGG*KPCAGS
Trigger: GCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGC...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PGLTPASTGSGWWVKAMRLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGERWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGCGGAGCGAGGGCACCTaGATGCAGGGCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRRSEGT*MQGWGR
Trigger: CCGCCCCCAGCCCTGCATGCAGGTGCCCTCGCTCCG...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGCGGGCCCAGCTGGCCTaGAGCTTCCGACCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRRAQLA*SFRPRP
Trigger: CGGGCGAGGTCGGAAGCTGCAGGCCAGCTGGGCCCG...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGCCATGCGCGGGGAGCTaGCCTGAGAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGEPCAGS*PERRGH
Trigger: GTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCATGG...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRDSNVM*LDAQAG
Trigger: CCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTC...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCTTTTAGCCCAAGGGTaGGGTGGGGTAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LWDPERGVRSASTGVRTRLLAQG*GGVSGG
Trigger: GCCTCCACTTACCCCACCCCACCCTTGGGCTAAAAG...CCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCGACTCCCCTCCCTCGTaGCAGGAAGGAGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EEAGALAEREGGREGGKGDSPPS*QEGGPP
Trigger: AGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTC...GCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGACTGCCCCTCAGCCCTaGGGTCCTCTAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRTAPQP*GPLGLH
Trigger: GTGCAGCCCTAGAGGACCCCAGGGCTGAGGGGCAGT...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCGGCAGTCGACAGGGCTaGTTGCGGGGTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPGSRQG*LRGGAG
Trigger: CCCCGCCCCACCCCGCAACCAGCCCTGTCGACTGCC...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGACAGGCAGCGGGTGGTaGGTGAAAGCCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: KLASGSKKGARGGEGGRETGSGW*VKAMRG
Trigger: CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGT...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR TCA 90 bp GAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCGAGAAAGCGCGGACGTaGGGCAGCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: EEAGALAEREGGREGGKGEKART*GSSASM
Trigger: CATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTC...GCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GCCGTCTGGGGCAGTGCTGGTGGATTTGGAATCAGGCATAGGAAGGGGCACAGGGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AVWGSAGGFGIRHRKGHRGEVQG*CCGPGA
Trigger: AGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCC...CCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp CCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCCCCGGGGTCCGATGCTaGCAAACCGGTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGLTPASTGSGWWVKAMRPGVRC*QTGWQR
Trigger: CCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGG...GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp CTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCTTCGCTCTCAGCTCTaGCCCTGTTTAGCCAACCGA +
Preference number: 4 (lower is better)
Translates to: LWDPERGVRSASTGVRTRLRSQL*PCLANR
Trigger: TCGGTTGGCTAAACAGGGTCAGAGCTGAGAGCGAAG...CCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGCCGCCAGCACGGGGGTaGGAACAAGGCACTAGGTCG +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGEPPARG*EQGTRS
Trigger: CGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGG...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGGAGTGGTGGGTCGTCTaGGCCACCCGGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGREWWVV*ATRPLW
Trigger: CCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTC...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 4 (lower is better)
Translates to: APWSDSSKHRQRVVGESHRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...ATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp GAACTGAAAAATCATTGCACTTTGACCGCGCGTCACGCCCGGCCCACCCGGCCCCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 4 (lower is better)
Translates to: ELKNHCTLTARHARPTRPRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...GGGCCGGGTGGGCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCTGCTTGGCTGCTGGTaGACAGCTCCACCGAGACCC +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGLLGCW*TAPPRP
Trigger: GGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAG...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGAGGGGAGCTGGGCGTaGTCATCCTCCCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWEGSWA*SSSPPS
Trigger: GGAGGGAGGGGAGGATGAGCACGCCCAGCTCCCCTC...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCCCCACATCTCCTGTTaGCCTCATTGCCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: LWDPERGVRSASTGVRTRPHISC*PHCPSQ
Trigger: TTGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGG...CCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GAAGGTGATGGAGGAGTCAAGGCGGCGCCGTCTGGGGCAGTGCTGGTGGATTTGCCATGCGCGGGGAGCTaGCCTGAGAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGDGGVKAAPSGAVLVDLPCAGS*PERRGH
Trigger: GTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCATGG...CAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTGACTCCTCCATCACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRCHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AAGTGCAGGGCTGATGCTGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCCTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: KCRADAVARGLPGLTPASLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...GCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGCACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGCTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGATCATCTTTACAAGCTaGCCCTCCAGGCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPIIFTS*PSRLPR
Trigger: CCTAGGGAGCCTGGAGGGCCAGCTTGTAAAGATGAT...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGAAGAAGCTGGAGCCTTaGCAGAGAGGGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLKKLEP*QRGREG
Trigger: TCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTT...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGCTGCTCTCCCCCTCCTaGTCGGGAGCAGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRLLSPS*SGAAGG
Trigger: TCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAG...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGGGCCTGTCCCAGGCTaGGACGAGGCCGTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGGPVPG*DEAVES
Trigger: GCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACCCAAGTTGCTCAAATaGAGGAGGAGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAPKLLK*RRSSHS
Trigger: GGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGG...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGGGTCAAGTTGGCGTCTaGCTCAAAGAAGGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRGQVGV*LKEGRS
Trigger: CGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACC...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGGAGCAGAGGCGGGGCTaGGGTGCCCCTCGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PGARRCPVPLNSTKKGYAEQRRG*GAPRAL
Trigger: GAGAGCCCGAGGGGCACCCCAGCCCCGCCTCTGCTC...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CAGGTCTGGCCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCCCCGGGACTTTGCCCTaGCCGCTACCGTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QVWPLEAAAVAKMTPGLCPGTLP*PLPLGC
Trigger: ACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGG...GCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp GCCGTCTGGGGCAGTGCTGGTGGATTTGGAATCAGGCATAGGAAGGGGCACAGGGAAGGGGCACAGGTCTaGCCACTGGAGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AVWGSAGGFGIRHRKGHREGAQV*PLEAAA
Trigger: CGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTC...CCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGTTCTATCGCAGCCGTaGACTCCTGTCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRVLSQP*TPVSSP
Trigger: GGGCGAGCTGACAGGAGTTCACGGCTGCGATAGAAC...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR TCA 90 bp GCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCCCTGGCCGCTACCGTTGGGTTCTATCGCAGCCGTaGACTCCTGTCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: AAAVAKMTPGLCPGRYRWVLSQP*TPVSSP
Trigger: GGGCGAGCTGACAGGAGTTCACGGCTGCGATAGAAC...CCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp GAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGACAGGGAGCCCCTCGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EPSTVVEGKGTWAGQGAPRWAVV*CPHLLA
Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...AGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLGEVQG*CCGPGA
Trigger: AGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCC...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGCCCGGGGTCCGATGCTaGCAAACCGGTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRPGVRC*QTGWQR
Trigger: CCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGG...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GACCTGGGGCCCGACTCCCCTCCCTCGTGGCAGGAAGGAGGCCCTCCTGGCCTGTTTCTGTCCTCTACTTaGCAGAGTCCATGTCGCGTG +
Preference number: 4 (lower is better)
Translates to: DLGPDSPPSWQEGGPPGLFLSST*QSPCRV
Trigger: CACGCGACATGGACTCTGTCAAGTAGAGGACAGAAA...CAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGACCCTCCCAAGGAACTaGAAGTCGGCGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRTLPRN*KSASRT
Trigger: CGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGT...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GVSEHPPFWDTQLAPGVTLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...GGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CAGGTCTGGCCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCGACGTGGAGGGGAAGTaGAGGGCTGATGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QVWPLEAAAVAKMTPGLCDVEGK*RADAVA
Trigger: GGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTC...GCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR GCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTGGACGCACAGGCCGGGGTTCGAGCACTGAGGCGACTTGTAGAGCCGCTCCCCCGCCGTCTGGGGCAGTaGTGGTGGATTTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LDAQAGVRALRRLVEPLPRRLGQ*WWIWNQ
Trigger: CTGATTCCAAATCCACCAGCACTGCCCCAGACGGCG...GGGGAGCGGCTCTACAAGTCGCCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGGGAACTCATCGCTGCTaGTATCCCCGCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KLASGSKKGARGGEGGREGTHRC*YPRQAL
Trigger: CAGAGCCTGGCGGGGATACCAGCAGCGATGAGTTCC...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGAGLML*PGGSLH
Trigger: ATGCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR CCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGTACGGGCTCGACTGCTaGATGATGGACGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRYGLDC*MMDVEG
Trigger: CCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGCGAATGCTGTCCGGTaGCCTGGCCCGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGANAVR*PGPSHP
Trigger: CGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGGAACACCCTCCATTCTaGGACACGCAACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LWDPERGVRSASTGVRTREHPPF*DTQLAP
Trigger: TGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTC...CCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGGACTCCCCTCCCTCGTaGCAGGAAGGAGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRDSPPS*QEGGPP
Trigger: AGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTC...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACCTGCATGCAGGGCTaGGGGCGGGGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSTCMQG*GRGRPG
Trigger: CCCAGGTCGCCCCCGCCCCCAGCCCTGCATGCAGGT...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGACCTAAGCGCAGGTGGTaGCTTAGCGCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGPKRRW*LSAAAA
Trigger: CGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGG...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGCCCAAGTTGCTCAAATaGAGGAGGAGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSAPKLLK*RRSSHS
Trigger: GGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGG...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCCCTCACAACACCACTTaGGAAAGGAGCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWAPHNTT*ERSSPH
Trigger: GTGGGGGCTGCTCCTTTCCCAAGTGGTGTTGTGAGG...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCCGCGATGCTGGTGCTaGTCGGGCGCACGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGPRCWC*SGARIS
Trigger: GGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGG...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATGCTGTGGCCCGGAGCACAGGCAGCGGGTaGTGGGTGAAAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: DCWMMDVEGKCRADAVARSTGSG*WVKAMR
Trigger: GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCT...CCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CAGGTCTGGCCACTGGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCCAAGGCGGCGCCGTCTaGGGCAGTGCTGGTGGATTT +
Preference number: 4 (lower is better)
Translates to: QVWPLEAAAVAKMTPGLCQGGAV*GSAGGF
Trigger: AAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTG...GCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CAA 72 bp GTCAAGGCGGCGCCGTCTGGGGCAGTGCTGGTGGATTaGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VKAAPSGAVLVD*ESGIGRGTGLA
Trigger: GGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGCACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLTPASTGSGWWVKAMRGHKLLQ*VLPVVV
Trigger: CACCACCACGGGCAGGACTCACTGAAGGAGTTTGTG...CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCCCGGGGTCCGATGCTaGCAAACCGGTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGPGVRC*QTGWQR
Trigger: CCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGG...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWEGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTTTGTTCGTTGGCATTaGCCTCTGCGGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSFVRWH*PLRGRG
Trigger: GCCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAA...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGGGAACTCATCCTGGGTaGGGCAGTACGGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGGTHPG*GSTGST
Trigger: TGTACTCCCCGTACTGCCTCACCCAGGATGAGTTCC...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGGGGGTAAGTGGAGGCTaGTCTCCCCCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGGVSGG*SPPPGR
Trigger: CCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCC...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGCCCCAGGACTGCTCTTaGGGCTCAGGGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRPQDCS*GSGWGV
Trigger: GACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGG...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWAERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR GCA 90 bp TCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGGGGTGGAACTCATCCTaGCCCCGGGGTCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: STGLSISLSSMDLGRLVVGWNSS*PRGPRS
Trigger: GGACCGCGGACCCCGGGGGCAGGATGAGTTCCACCC...CACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585382.5
CDS-3UTR CCA 90 bp GGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GLTPASTGSGWWVKAMRGVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGCHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATGCTGTGGCCCGGTACGGGCTCGACTGCTaGATGATGGACGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: DCWMMDVEGKCRADAVARYGLDC*MMDVEG
Trigger: CCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...CCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTTGCTGTCCGGTGGCCTaGCCCGAGCCATCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLCCPVA*PEPSEH
Trigger: GTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCA...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CCA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGCTACCTAAGCGCAGGTaGTGGCTTAGCGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWLPKRR*WLSAAA
Trigger: CGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAG...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGTCAGCACGGTCAGGGTaGGGGAGTGGTGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWSARSG*GSGGSS
Trigger: AGACGACCCACCACTCCCCCACCCTGACCGTGCTGA...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTGACAAACGGCTGTCCGGTGGCCTaGCCCGAGCCATCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: DCCGMFRKLPSRGPMLTNGCPVA*PEPSEH
Trigger: GTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCC...GTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp GGGGCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCGGATTCTTGTCAGCCTaGCGCAGGCAGTCAATCCGC +
Preference number: 4 (lower is better)
Translates to: GAPWSDSSKHRQRVVGESGFLSA*RRQSIR
Trigger: GCGGATTGACTGCCTGCGCCAGGCTGACAAGAATCC...GCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585382.5
CDS-3UTR TCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCGGGTCGGGGATAGGATaGGAGATGTTGAATGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSGSGIG*EMLNGG
Trigger: GCCCCCATTCAACATCTCTCATCCTATCCCCGACCC...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GTGGTAGCGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGAACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VVADGRVREIRARLLDDGTRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...TCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp GACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATGCTGTGGCCCGGGGATGTTCAGAAAGTTaGCGTCCCGGGGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: DCWMMDVEGKCRADAVARGCSES*RPGVRC
Trigger: GCATCGGACCCCGGGACGGCAACTTTCTGAACATCC...CCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR GCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCGGATGTTCAGAAAGTTaGCGTCCCGGGGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSGCSES*RPGVRC
Trigger: GCATCGGACCCCGGGACGGCAACTTTCTGAACATCC...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTGCCCTGGCCGCTACCGTTGGGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAAVAKMTPGLCPGRYRWERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...CCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR GCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGATGACCCCGGGACTTTaGCCTGGCCGCTACCGTTGG +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRMTPGL*PGRYRW
Trigger: CCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCAT...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR GCA 90 bp GATGTGGCTGGACGCACAGGCCGGGGTTCGAGCACTGAGGCGACTTGTAGAGCCTGGAACTCATCACGCTaGTGGTATCCCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: DVAGRTGRGSSTEATCRAWNSSR*WYPRQA
Trigger: AGCCTGGCGGGGATACCAGCAGCGTGATGAGTTCCA...GGCTCTACAAGTCGCCTCAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp GACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATGCTGTGGCCCGGGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: DCWMMDVEGKCRADAVARVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...CCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TTTGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: FGIRHRKGHRSGHWRRRRPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...CCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp CTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLRLRVGCQNTLHSGTRNTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...GTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGTCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRSHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGCTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: RMVGCVKYGLDCWMMDVELHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGACATTAGCCATTCAATaGAGAAGCCGGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPTLAIQ*RSRRES
Trigger: TGACTCTCTCCGGCTTCTCCATTGAATGGCTAATGT...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCCTTTTAGCCCAAGGGTaGGGTGGGGTAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSLLAQG*GGVSGG
Trigger: GCCTCCACTTACCCCACCCCACCCTTGGGCTAAAAG...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTTGCGGTCCGCGATGCTaGTGCTGGTCGGGCGCACGG +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPCGPRC*CWSGAR
Trigger: CCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCA...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTTGCGGTCCGCGATGCTaGTGCTGGTCGGGCGCACGG +
Preference number: 4 (lower is better)
Translates to: TNLLSALLIMLVRVKLASCGPRC*CWSGAR
Trigger: CCGTGCGCCCGACCAGCACCAGCATCGCGGACCGCA...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TTGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGCGGCGGCGGTAACTCATCACGCTGCTaGTATCCCCGCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LESGIGRGTGLATGGGGGNSSRC*YPRQAL
Trigger: CAGAGCCTGGCGGGGATACCAGCAGCGTGATGAGTT...ACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
3UTR CAA 72 bp CTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTaGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LSALLIMLVRVK*ASGSKKGARGG
Trigger: TCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTGAGAAAGCGCGGACGTaGGGCAGCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLEKART*GSSASM
Trigger: CATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTC...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp AGGACTGAGACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCGAGAAAGCGCGGACGTaGGGCAGCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: RTETAVGCSESCRPGVRCEKART*GSSASM
Trigger: CATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTC...GCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp ACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGAGCTGATTGTGACTCCAATGTaGTGTGGCTGGACGCACAGG +
Preference number: 4 (lower is better)
Translates to: TPASTGSGWWVKAMRGELIVTPM*CGWTHR
Trigger: CCTGTGCGTCCAGCCACATCACATTGGAGTCACAAT...CAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCGGCTCGACTGCTGGATaGTGGACGTGGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPGSTAG*WTWRGS
Trigger: ACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCC...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGACCCTCCCAAGGAACTaGAAGTCGGCGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGTLPRN*KSASRT
Trigger: CGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGT...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGGTGGAACTCATCGCTaGTGGTATCCCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGGGTHR*WYPRQA
Trigger: AGCCTGGCGGGGATACCAGCAGCGATGAGTTCCACC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR GCA 90 bp TCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: STGLSISLSSMDLGRLVVTRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...CACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTGGAGGCGCCTGTCGTTaGGAATGCTGTCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSGGACR*ECCPVA
Trigger: GGCCACCGGACAGCATTCGCAACGACAGGCGCCTCC...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
CDS-3UTR GCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGGTCCGCGATGCTGGTaGTGGTCGGGCGCACGGATC +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPGPRCW*WSGARI
Trigger: GATCCGTGCGCCCGACCAGCACCAGCATCGCGGACC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp TCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGAGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SDSSKHRQRVVGESHARGERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...TCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp ACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGATGACCCCGGGACTTTaGCCTGGCCGCTACCGTTGG +
Preference number: 4 (lower is better)
Translates to: TGLSISLSSMDLGRLVVLMTPGL*PGRYRW
Trigger: CCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCAT...CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGGGAACTCATCGCTGCTaGTATCCCCGCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRGTHRC*YPRQAL
Trigger: CAGAGCCTGGCGGGGATACCAGCAGCGATGAGTTCC...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR CCA 90 bp AATGCTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: NAGEGQVGVWLKEGRSGRVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...CCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGCCTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LPGPPRSAPGSPFCSTLRVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...CCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGTCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGESHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCTACGGGCTCGACTGCTaGATGATGGACGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GVSEHPPFWDTQLAPGVTYGLDC*MMDVEG
Trigger: CCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...GGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGTGCTGTCCGGTGGCCTaGCCCGAGCCATCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGCCPVA*PEPSEH
Trigger: GTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCA...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR CCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTCTACCTAAGCGCAGGTaGTGGCTTAGCGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLLPKRR*WLSAAA
Trigger: CGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAG...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTTCAGCACGGTCAGGGTaGGGGAGTGGTGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLSARSG*GSGGSS
Trigger: AGACGACCCACCACTCCCCCACCCTGACCGTGCTGA...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGCCGCGATGCTGGTGCTaGTCGGGCGCACGGATCTCC +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGPRCWC*SGARIS
Trigger: GGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGG...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCGGGGAGTACATAGCTaGGCGCCCGGGCGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLRGVHS*APGRER
Trigger: GCGCTCCCGCCCGGGCGCCCAGCTATGTACTCCCCG...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGGGGTGGAACTCATCCTaGGTGAGGCAGTACGGGGAG +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRGWNSS*VRQYGE
Trigger: CTCCCCGTACTGCCTCACCCAGGATGAGTTCCACCC...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
3UTR CAA 72 bp AAGTTGCCGTCCCGGGGTCCGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTCGTTGCGAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: KLPSRGPMLTNR*AEEAPVVANEG
Trigger: ACCTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp GCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: APWSDSSKHRQRVVGESHGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...ATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp TGCTGGGGAACGGCCTGTCCCGGGATAGAACACGTCATCAACAGGGCTCTCCATGGCTCGACTGCTGGATaGTGGACGTGGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CWGTACPGIEHVINRALHGSTAG*WTWRGS
Trigger: ACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCC...ATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTCCCGGGGTCCGATGCTaGCAAACCGGTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPPGVRC*QTGWQR
Trigger: CCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGG...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACGGCAGGGGCAGGAACTaGTGGGGCGGAGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDGRGRN*WGGARA
Trigger: TGCCCTCGCTCCGCCCCATCAGTTCCTGCCCCTGCC...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACTCTCTCAGAGGATCCTaGCCTGTGCTTTGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNSLRGS*PVLCVF
Trigger: GAAAACACAAAGCACAGGTCAGGATCCTCTGAGAGA...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCAAAATCATTGCACTTTaGCCGCGCGTCACGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPKIIAL*PRVTPG
Trigger: GCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTT...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGAAAATCATTGCACTTTaGCCGCGCGTCACGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGKIIAL*PRVTPG
Trigger: GCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTT...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp AAGTCCAGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGCAGCGGGTGGTGGGTaGAAGCCATGCGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KSSFPDFFREAGPASTSLAAGGG*KPCAGS
Trigger: GCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGC...CAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGGATGTTCAGAAAGTTaGCGTCCCGGGGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGGCSES*RPGVRC
Trigger: GCATCGGACCCCGGGACGGCAACTTTCTGAACATCC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGCCCCTTCAGAATTGTaGTGGTTGCTTTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRAPSEL*WLLCLG
Trigger: CCCCAAACAAAGCAACCAGCACAATTCTGAAGGGGC...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTCCCCAGGACTGCTCTTaGGGCTCAGGGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPPQDCS*GSGWGV
Trigger: GACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGG...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGAAATTGTTCCCAAGTTaGTCAAATGGAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPKLFPS*SNGGGV
Trigger: AACTCCTCCTCCATTTGAGCAACTTGGGAACAATTT...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACCAGGCACCGTTCGCCTaGCGCTACGGCCCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDQAPFA*RYGPRS
Trigger: CGACCTGGGGCCGTAGCGGCAGGCGAACGGTGCCTG...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTCCTGTTGCCCTCATTaGCCCTCACAACACCACTTG +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSSCCPH*PSQHHL
Trigger: CAAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGA...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWSASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGCHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GRSWSLGREGGREGGREGGLRLL*DVQKVA
Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGAAGAAGCTGGAGCCTTaGCAGAGAGGGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGKKLEP*QRGREG
Trigger: TCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTT...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCGAACACCCTCCATTCTaGGACACGCAACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSEHPPF*DTQLAP
Trigger: TGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTC...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGACTCCCCTCCCTCGTaGCAGGAAGGAGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGDSPPS*QEGGPP
Trigger: AGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTC...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTGGCCAAGTCACACCCTaGAGGGGAGCTGGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: TNLLSALLIMLVRVKLASGQVTP*RGAGRA
Trigger: AGCACGCCCAGCTCCCCTCCAGGGTGTGACTTGGCC...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTCTTGTGGCTTCCAGCTaGGTAGCAGGCACCGTTCGC +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLLVASS*VAGTVR
Trigger: GCGAACGGTGCCTGCTACCCAGCTGGAAGCCACAAG...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGAACAAAAGCCGCCCCTaGAGCCAGCCACCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PGARRCPVPLNSTKKGYANKSRP*SQPPCG
Trigger: GCCACAAGGTGGCTGGCTCCAGGGGCGGCTTTTGTT...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAACAAAAGCCGCCCCTaGAGCCAGCCACCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLNKSRP*SQPPCG
Trigger: GCCACAAGGTGGCTGGCTCCAGGGGCGGCTTTTGTT...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGCCTCACAACACCACTTaGGAAAGGAGCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRPHNTT*ERSSPH
Trigger: GTGGGGGCTGCTCCTTTCCCAAGTGGTGTTGTGAGG...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCGGTCAAGTTGGCGTCTaGCTCAAAGAAGGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPGQVGV*LKEGRS
Trigger: CGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACC...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACCTGTCAGCGTGGCTaGTCCTGTCCTGGAGCGTCG +
Preference number: 4 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSTCQRG*SCPGAS
Trigger: CGACGCTCCAGGACAGGACCAGCCACGCTGACAGGT...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp AACACTTTTGAAAAGGACGACACCCAACACCCTCCCAAGGAACTGAAAGTCGGCGGCAGTCGACAGGGCTaGTTGCGGGGTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NTFEKDDTQHPPKELKVGGSRQG*LRGGAG
Trigger: CCCCGCCCCACCCCGCAACCAGCCCTGTCGACTGCC...GCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGAGGGAACAGACGGGCTaGCTGCCTACTTGCATTCCG +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGREQTG*LPTCIP
Trigger: CGGAATGCAAGTAGGCAGCCAGCCCGTCTGTTCCCT...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCAGGGAACAGACGGGCTaGCTGCCTACTTGCATTCCG +
Preference number: 4 (lower is better)
Translates to: GVSEHPPFWDTQLAPGVTREQTG*LPTCIP
Trigger: CGGAATGCAAGTAGGCAGCCAGCCCGTCTGTTCCCT...GGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SVILSPAPSHSRPRKSQNAGLML*PGGSLV
Trigger: GACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...GTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp AAGTCCAGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGCCTGGCCGCTACCGTTaGGCTGTCCGGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KSSFPDFFREAGPASTSLPGRYR*AVRWPG
Trigger: GCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGG...CAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGAGAAAGCGCGGACGTaGGGCAGCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGEKART*GSSASM
Trigger: CATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTC...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTCACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLHKLLQ*VLPVVV
Trigger: CACCACCACGGGCAGGACTCACTGAAGGAGTTTGTG...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGTTTCTGTCCTCTACTTaGCAGAGTCCATGTCGCGTG +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGEFLSST*QSPCRV
Trigger: CACGCGACATGGACTCTGTCAAGTAGAGGACAGAAA...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGACTTCGCTCTCAGCTCTaGCCCTGTTTAGCCAACCGA +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGLRSQL*PCLANR
Trigger: TCGGTTGGCTAAACAGGGTCAGAGCTGAGAGCGAAG...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGTTAAACTCTAAAATGTaGACGTTTCCTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWLNSKM*TFPSAL
Trigger: GAGGGCTGAAGGAAACGTTCACATTTTAGAGTTTAA...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp AATGCTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAAGAAGAAACTTGTTTaGCGGGACGGGCGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NAGEGQVGVWLKEGRSGRKKKLV*RDGRPL
Trigger: CAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTT...CCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAAGAAGAAACTTGTTTaGCGGGACGGGCGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRKKKLV*RDGRPL
Trigger: CAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTT...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTGGAACTCATCCTGGGTaGGGCAGTACGGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLGTHPG*GSTGST
Trigger: TGTACTCCCCGTACTGCCTCACCCAGGATGAGTTCC...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CCTGATGCTGTTGCAACAGGAGTCTGTGATACTCTCACCAGCTCCGTCACATTCCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 4 (lower is better)
Translates to: PDAVATGVCDTLTSSVTFRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...GAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGACGTGGAGGGGAAGTaGAGGGCTGATGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPDVEGK*RADAVA
Trigger: GGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp AGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGGCCACGACGTGGAGGGGAAGTaGAGGGCTGATGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SFPDFFREAGPASTSLGHDVEGK*RADAVA
Trigger: GGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTC...GTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp GCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: APWSDSSKHRQRVVGESHKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...ATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTGCCTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGAAATTGTTCCCAAGTTaGTCAAATGGAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LPGPPRSAPGSPFCSTLRKLFPS*SNGGGV
Trigger: AACTCCTCCTCCATTTGAGCAACTTGGGAACAATTT...CCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSDSNVM*LDAQAG
Trigger: CCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTC...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGGCCACACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFPDFFREAGPASTSLGHTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...GTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp ACCGGTTGGCAGAGGAGGCGCCTGTCGTTGCGAATGAAGGTGATGGAGGAGTCATGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TGWQRRRLSLRMKVMEESCHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...TGACTCCTCCATCACCTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGTCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRSHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTCTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: TNLLSALLIMLVRVKLASLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTTGCTGTCCGGTGGCCTaGCCCGAGCCATCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLCCPVA*PEPSEH
Trigger: GTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCA...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCGAATGCTGTCCGGTaGCCTGGCCCGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLANAVR*PGPSHP
Trigger: CGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGC...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTTTCTGCTTGGCTGCTaGTGCACAGCTCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRFLLGC*CTAPPR
Trigger: TCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAA...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCGCTGGTTGCTTTGTTTaGGGACTTTGTTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSAGCFV*GLCSFP
Trigger: GGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGC...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGACCTGCATGCAGGGCTaGGGGCGGGGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRTCMQG*GRGRPG
Trigger: CCCAGGTCGCCCCCGCCCCCAGCCCTGCATGCAGGT...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGCCTCGGGCTCTCGATTaGGGGACGAAAGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: PGARRCPVPLNSTKKGYAPRALD*GTKVLV
Trigger: CACGAGAACTTTCGTCCCCCAATCGAGAGCCCGAGG...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CAACAGGAGTCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGAGCACAGGCAGCGGGTaGTGGGTGAAAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: QQESVILSPAPSHSRPRKSTGSG*WVKAMR
Trigger: GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCT...CTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDGPGAP*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCTGATGCTGTTGCAACAGGAGTCTGTGATACTCTCACCAGCTCCGTCACATTCGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PDAVATGVCDTLTSSVTFGPGAP*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...GAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTGCTCTGTCGCGCCCATaGCATCTCCATGTTCTATCG +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLALSRP*HLHVLS
Trigger: CGATAGAACATGGAGATGTCATGGGCGCGACAGAGC...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR TCA 90 bp GGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCATTGTGACTCCAATGTaGTGTGGCTGGACGCACAGG +
Preference number: 4 (lower is better)
Translates to: GVSEHPPFWDTQLAPGVTIVTPM*CGWTHR
Trigger: CCTGTGCGTCCAGCCACATCACATTGGAGTCACAAT...GGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RVREIRARLLDDGRGGEVCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...CACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAATGGAAGGAGGGGAGGTaGTGGACCGCCGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQWKEGR*WTAAPG
Trigger: CCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCA...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGGCTCGACTGCTGGATaGTGGACGTGGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGGSTAG*WTWRGS
Trigger: ACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCC...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 4 (lower is better)
Translates to: ACPRLGRGRREHSDFFLREGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCGCTCCAAAACACTTTTaGAAAGGACGACACCCAACA +
Preference number: 4 (lower is better)
Translates to: EEAGALAEREGGREGGKGAPKHF*KGRHPT
Trigger: TGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGC...GCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTTTTGTTCGTTGGCATTaGCCTCTGCGGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TNLLSALLIMLVRVKLASFVRWH*PLRGRG
Trigger: GCCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAA...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGGGACGAAAGTTCTCGTaGCTTTATTGCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRGRKFS*LYCSFI
Trigger: AATAAAGGAGCAATAAAGTCACGAGAACTTTCGTCC...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLTRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: RVREIRARLLDDGRGGEVKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...CACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR GCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACAGGGAGCCCCTTCTaGTTCGCTCTCAGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSTGSPF*FALSSD
Trigger: GTCAGAGCTGAGAGCGAAGCAGAAGGGGCTCCCTGT...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTCCCCACATCTCCTGTTaGCCTCATTGCCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLPHISC*PHCPSQ
Trigger: TTGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGG...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTCTTATGTATCTCAGTaGAGAGACGGGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLRLRVGCQNTLHSGTRNSYVSQ*RDGGGG
Trigger: CCCTCCACCCCCGTCTCTGCACTGAGATACATAAGA...GTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: STGLSISLSSMDLGRLVVPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...CACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACAGTCCTGGAAAACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LTSSVTFQTPEVTKQSWKTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...TTTCCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp AACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NRALHLTVIDGLGALGGACHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...AGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp ACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGTCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGLSISLSSMDLGRLVVLSHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp AACACTTTTGAAAAGGACGACACCCAACACCCTCCCAAGGAACTGAAAGTCGGCGCGAATGCTGTCCGGTaGCCTGGCCCGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: NTFEKDDTQHPPKELKVGANAVR*PGPSHP
Trigger: CGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGC...GCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGAGAGTCAGGCAAAGATaGTATAACAGAAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: KLASGSKKGARGGEGGRERVRQR*YNRSAV
Trigger: CACTGCGCTTCTGTTATACCATCTTTGCCTGACTCT...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAGGGCCTGTCCCAGGCTaGGACGAGGCCGTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQGPVPG*DEAVES
Trigger: GCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCC...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGGCCAAGTCACACCCTaGAGGGGAGCTGGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLGQVTP*RGAGRA
Trigger: AGCACGCCCAGCTCCCCTCCAGGGTGTGACTTGGCC...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp ACAATTAAGAAAGAGAGAGAAAGAGAGAGGCACAAGGACTCAAGAAGGGGCCAGCGGCCCGGGCCCAGCTaGCCTGCAGCTTCCGACCTC +
Preference number: 4 (lower is better)
Translates to: TIKKERERERHKDSRRGQRPGPS*PAASDL
Trigger: GAGGTCGGAAGCTGCAGGCCAGCTGGGCCCGGGCCG...CTGGCCCCTTCTTGAGTCCTTGTGCCTCTCTCTTTCTCTCTCTTTCTTAATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGGGCTGTCCGGTGGCCTaGCCCGAGCCATCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSGCPVA*PEPSEH
Trigger: GTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCC...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR TCA 90 bp TCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACGAGAAAGCGCGGACGTaGGGCAGCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: SVILSPAPSHSRPRKSQNEKART*GSSASM
Trigger: CATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTC...GTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGAGAAAGCGCGGACGTaGGGCAGCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLEKART*GSSASM
Trigger: CATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTC...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp TCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: STGLSISLSSMDLGRLVVRWAVV*CPHLLA
Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...CACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp AACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTCGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NRALHLTVIDGLGALGGARWAVV*CPHLLA
Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...AGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CAACAGGAGTCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGCACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QQESVILSPAPSHSRPRKHKLLQ*VLPVVV
Trigger: CACCACCACGGGCAGGACTCACTGAAGGAGTTTGTG...CTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGEGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCGCTCCAAAACACTTTTaGAAAGGACGACACCCAACA +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSAPKHF*KGRHPT
Trigger: TGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGC...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGATTCCGCTAGGACACTaGAAACCCAGAAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: KLASGSKKGARGGEGGREIPLGH*KPRKQN
Trigger: GTTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAAT...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAACTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACGACGTGGAGGGGAAGTaGAGGGCTGATGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDDVEGK*RADAVA
Trigger: GGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTC...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGGAGGCGCCTGTCGTTaGGAATGCTGTCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRGGACR*ECCPVA
Trigger: GGCCACCGGACAGCATTCGCAACGACAGGCGCCTCC...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
CDS-3UTR GCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCTGCTTGGCTGCTGGTaGACAGCTCCACCGAGACCC +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLLLGCW*TAPPRP
Trigger: GGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAG...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATCGGAGCGAGGGCACCTaGATGCAGGGCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNRSEGT*MQGWGR
Trigger: CCGCCCCCAGCCCTGCATGCAGGTGCCCTCGCTCCG...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TNLLSALLIMLVRVKLASPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPCHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACAGTCCTGGAAATACGGGCTCGACTGCTaGATGATGGACGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LTSSVTFQTPEVTKQSWKYGLDC*MMDVEG
Trigger: CCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...TTTCCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPGLRLL*DVQKVA
Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AACACTTTTGAAAAGGACGACACCCAACACCCTCCCAAGGAACTGAAAGTCGGCGGGCTCTCTGAGAACTaGGCTGCTTCTGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: NTFEKDDTQHPPKELKVGGLSEN*AASGAR
Trigger: GCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCC...GCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGGCTGGTTGCTTTGTTTaGGGACTTTGTTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGAGCFV*GLCSFP
Trigger: GGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGC...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTAAGAAGCTGGAGCCTTaGCAGAGAGGGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TNLLSALLIMLVRVKLASKKLEP*QRGREG
Trigger: TCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTT...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACGGAAGGAGGCCCTCCTaGCCTGCAGAGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDGRRPS*PAERGE
Trigger: TTCCCCTCTCTCTGCAGGCCAGGAGGGCCTCCTTCC...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAACCTGCATGCAGGGCTaGGGGCGGGGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: QIVPKLLKWRRSSHSNSKTCMQG*GRGRPG
Trigger: CCCAGGTCGCCCCCGCCCCCAGCCCTGCATGCAGGT...TTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACCCCAAGTTGCTCAAATaGAGGAGGAGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LLRLRVGCQNTLHSGTRNPKLLK*RRSSHS
Trigger: GGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGG...GTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTGTACCCGGACGGGGATaGGGCGAGGAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLVPGRG*GEEGCW
Trigger: CCAGCACCCCTCCTCGCCCCATCCCCGTCCGGGTAC...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACATGAGAGATGTTGAATaGGGGCGGGAGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDMRDVE*GREGRR
Trigger: CCGGCGCCCCTCCCGCCCCCATTCAACATCTCTCAT...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTGTGTTTTCGGGGAGTACATAGCTaGGCGCCCGGGCGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RGAMLIFSQRILTCALCFRGVHS*APGRER
Trigger: GCGCTCCCGCCCGGGCGCCCAGCTATGTACTCCCCG...AAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGCGTTGGGCTGTCCGGTaGCCTGGCCCGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWRWAVR*PGPSHP
Trigger: CGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACG...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592199.6
3UTR CAA 72 bp TCTCCTAACACGTCCCCACATCTCCTGTTGCCCTCATaGCCCCTCACAACACCACTTGGGAAAGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPNTSPHLLLPS*PLTTPLGKGAA
Trigger: GGCTGCTCCTTTCCCAAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGGACGTGTTAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACGTTCTATCGCAGCCGTaGACTCCTGTCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDVLSQP*TPVSSP
Trigger: GGGCGAGCTGACAGGAGTTCACGGCTGCGATAGAAC...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR TCA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTATTGTGACTCCAATGTaGTGTGGCTGGACGCACAGG +
Preference number: 4 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSIVTPM*CGWTHR
Trigger: CCTGTGCGTCCAGCCACATCACATTGGAGTCACAAT...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTGACAAACTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: DCCGMFRKLPSRGPMLTNCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...GTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGATAGGAAAACTCTCTaGTGCATTGCACTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGEDRKTL*CIALGS
Trigger: TGAACCAAGTGCAATGCATCAGAGAGTTTTCCTATC...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGTGGAACTCATCGCTaGTGGTATCCCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLGGTHR*WYPRQA
Trigger: AGCCTGGCGGGGATACCAGCAGCGATGAGTTCCACC...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR GCA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSTRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGGGGGTAAGTGGAGGCTaGTCTCCCCCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSGVSGG*SPPPGR
Trigger: CCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCC...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGCTTTGCGGTCCGCGATaGTGGTGCTGGTCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRLCGPR*WCWSGA
Trigger: TGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAG...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTGTGTTTTGGGACGGGCGGCCTTTaGGGTCCGCGATGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RGAMLIFSQRILTCALCFGTGGL*GPRCWC
Trigger: GCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCC...AAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTCACACCTTGTCAGCCTaGCGCAGGCAGTCAATCCGC +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLHTLSA*RRQSIR
Trigger: GCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGTG...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GCTCCCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: APWSDSSKHRQRVVGESHVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...ATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACTCTTGCGGCTCAGGGTaGGGTGTCAGAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDSCGSG*GVRTPS
Trigger: GGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGA...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGAGGGAAAGGGCACGTaGGCCGGACAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEEEGKGT*AGQGAP
Trigger: AGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTC...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGTACCCGGACGGGGATaGGGCGAGGAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNVPGRG*GEEGCW
Trigger: CCAGCACCCCTCCTCGCCCCATCCCCGTCCGGGTAC...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGATCGACCTGTCAGCGTaGCTGGTCCTGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLIDLSA*LVLSWS
Trigger: GCTCCAGGACAGGACCAGCCACGCTGACAGGTCGAT...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLGPGAP*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTGTGTTTTGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGAMLIFSQRILTCALCFAGLML*PGGSLV
Trigger: GACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...AAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CCA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTGTGTTTTGAAGGGGCACAGGTCTaGCCACTGGAGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RGAMLIFSQRILTCALCFEGAQV*PLEAAA
Trigger: CGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTC...AAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR TCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGATTGTGACTCCAATGTaGTGTGGCTGGACGCACAGG +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGIVTPM*CGWTHR
Trigger: CCTGTGCGTCCAGCCACATCACATTGGAGTCACAAT...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLHKLLQ*VLPVVV
Trigger: CACCACCACGGGCAGGACTCACTGAAGGAGTTTGTG...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGAGGATCCTGACCTGTaGTTTGTGTTTTCATACAAT +
Preference number: 4 (lower is better)
Translates to: LVRVKLASGSKKGARGGEEDPDL*FVFSYN
Trigger: ATTGTATGAAAACACAAAGCACAGGTCAGGATCCTC...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGGAACTGAAAAATCATTaGACTTTGACCGCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGELKNH*TLTARH
Trigger: GTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GAACTGAAAAATCATTGCACTTTGACCGCGCGTCACGCCCGGCCCACCCGGCCCTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: ELKNHCTLTARHARPTRPSASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...GGGCCGGGTGGGCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAACTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGATACGGGCTCGACTGCTaGATGATGGACGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRYGLDC*MMDVEG
Trigger: CCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: STGLSISLSSMDLGRLVVGLRLL*DVQKVA
Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...CACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGAGAGTCAGGCAAAGATaGTATAACAGAAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRRVRQR*YNRSAV
Trigger: CACTGCGCTTCTGTTATACCATCTTTGCCTGACTCT...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGACATTAGCCATTCAATaGAGAAGCCGGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGTLAIQ*RSRRES
Trigger: TGACTCTCTCCGGCTTCTCCATTGAATGGCTAATGT...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGAACACCCTCCATTCTaGGACACGCAACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPEHPPF*DTQLAP
Trigger: TGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGGGAAGGAGGCCCTCCTaGCCTGCAGAGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRGRRPS*PAERGE
Trigger: TTCCCCTCTCTCTGCAGGCCAGGAGGGCCTCCTTCC...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAACTACCTAAGCGCAGGTaGTGGCTTAGCGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQLPKRR*WLSAAA
Trigger: CGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAG...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGGCCAAGTCACACCCTaGAGGGGAGCTGGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEEGQVTP*RGAGRA
Trigger: AGCACGCCCAGCTCCCCTCCAGGGTGTGACTTGGCC...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGATGAGAGATGTTGAATaGGGGCGGGAGGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRMRDVE*GREGRR
Trigger: CCGGCGCCCCTCCCGCCCCCATTCAACATCTCTCAT...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACCCTCGGGCTCTCGATTaGGGGACGAAAGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDPRALD*GTKVLV
Trigger: CACGAGAACTTTCGTCCCCCAATCGAGAGCCCGAGG...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGGGTGGAACTCATCCTaGGTGAGGCAGTACGGGGAG +
Preference number: 4 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRGWNSS*VRQYGE
Trigger: CTCCCCGTACTGCCTCACCCAGGATGAGTTCCACCC...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAAGCACAGGCAGCGGGTaGTGGGTGAAAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQSTGSG*WVKAMR
Trigger: GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCT...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGCTCTGTCGCGCCCATaGCATCTCCATGTTCTATCG +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLALSRP*HLHVLS
Trigger: CGATAGAACATGGAGATGTCATGGGCGCGACAGAGC...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR TCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLRWAVV*CPHLLA
Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp AAGTCCAGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: KSSFPDFFREAGPASTSLGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...CAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp TCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SVILSPAPSHSRPRKSQNPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...GTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp AAGTCCAGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KSSFPDFFREAGPASTSLPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...CAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTGGAAGGAGGGGAGGTaGTGGACCGCCGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLWKEGR*WTAAPG
Trigger: CCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLGEVQG*CCGPGA
Trigger: AGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAGGCTCGACTGCTGGATaGTGGACGTGGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQGSTAG*WTWRGS
Trigger: ACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCC...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGTTTCTGTCCTCTACTTaGCAGAGTCCATGTCGCGTG +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGFLSST*QSPCRV
Trigger: CACGCGACATGGACTCTGTCAAGTAGAGGACAGAAA...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTTTTCTGTCCTCTACTTaGCAGAGTCCATGTCGCGTG +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPFLSST*QSPCRV
Trigger: CACGCGACATGGACTCTGTCAAGTAGAGGACAGAAA...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTGTGTTTTTCTAGGGCTGCACGCTaGGGACAGGGGGAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGAMLIFSQRILTCALCFSRAAR*GQGEGF
Trigger: GAAGCCCTCCCCCTGTCCTCAGCGTGCAGCCCTAGA...AAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAATCTAGGGCTGCACGCTaGGGACAGGGGGAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNESRAAR*GQGEGF
Trigger: GAAGCCCTCCCCCTGTCCTCAGCGTGCAGCCCTAGA...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp AATGCTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGGGACGAAAGTTCTCGTaGCTTTATTGCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: NAGEGQVGVWLKEGRSGRGRKFS*LYCSFI
Trigger: AATAAAGGAGCAATAAAGTCACGAGAACTTTCGTCC...CCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGATTCCGCTAGGACACTaGAAACCCAGAAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRIPLGH*KPRKQN
Trigger: GTTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAAT...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGCAGCGGGTGGTGGGTaGAAGCCATGCGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLAAGGG*KPCAGS
Trigger: GCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGAT +
Preference number: 4 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPMSASP*WFELSD
Trigger: ATCAGATAGTTCAAACCAGCAAGGAGATGCGGACAT...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGGACGTGGAGGGGAAGTaGAGGGCTGATGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWDVEGK*RADAVA
Trigger: GGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTC...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGGATGTTCAGAAAGTTaGCGTCCCGGGGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRGCSES*RPGVRC
Trigger: GCATCGGACCCCGGGACGGCAACTTTCTGAACATCC...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGGGGTAAGTGGAGGCTaGTCTCCCCCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNGVSGG*SPPPGR
Trigger: CCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCC...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp AATGCTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAAATTGTTCCCAAGTTaGTCAAATGGAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: NAGEGQVGVWLKEGRSGRKLFPS*SNGGGV
Trigger: AACTCCTCCTCCATTTGAGCAACTTGGGAACAATTT...CCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATCTTTGCGGTCCGCGATaGTGGTGCTGGTCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNLCGPR*WCWSGA
Trigger: TGCGCCCGACCAGCACCAGCATCGCGGACCGCAAAG...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCACACCTTGTCAGCCTaGCGCAGGCAGTCAATCCGC +
Preference number: 4 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSHTLSA*RRQSIR
Trigger: GCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGTG...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TTGATGTCCGCATCTCCTTGCTGGTTTGAACTATCTGATTGTCCGGATTCCGGAGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LMSASPCWFELSDCPDSGDSNVM*LDAQAG
Trigger: CCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTC...TCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRDSNVM*LDAQAG
Trigger: CCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTC...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GCCGTCTGGGGCAGTGCTGGTGGATTTGGAATCAGGCATAGGAAGGGGCACAGGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: AVWGSAGGFGIRHRKGHRSASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...CCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEETWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACTCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVILSPAPSHSRPRKSQNSHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...GTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTCTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPGLRLL*DVQKVA
Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTTTTCTGCTTGGCTGCTaGTGCACAGCTCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLFLLGC*CTAPPR
Trigger: TCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAA...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCTGGTTGCTTTGTTTaGGGACTTTGTTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGAGCFV*GLCSFP
Trigger: GGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGC...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGTCTTGCGGCTCAGGGTaGGGTGTCAGAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSSCGSG*GVRTPS
Trigger: GGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGA...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGAGAGCTACTTCCTGTaGTGTGTTACCAAATTGTTC +
Preference number: 4 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGESYFL*CVTKLF
Trigger: GAACAATTTGGTAACACACCACAGGAAGTAGCTCTC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAAACAGGCAGCGGGTGGTaGGTGAAAGCCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNETGSGW*VKAMRG
Trigger: CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGT...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp ACAATTAAGAAAGAGAGAGAAAGAGAGAGGCACAAGGACTCAAGAAGGGGCCAGAGCACAGGCAGCGGGTaGTGGGTGAAAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: TIKKERERERHKDSRRGQSTGSG*WVKAMR
Trigger: GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCT...CTGGCCCCTTCTTGAGTCCTTGTGCCTCTCTCTTTCTCTCTCTTTCTTAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGCAGGGCTGATGCTGTaGCCCGGGGGCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLAGLML*PGGSLV
Trigger: GACCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATCCCGGGACTTTGCCCTaGCCGCTACCGTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNPGTLP*PLPLGC
Trigger: ACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGG...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGCAAGGCGGCGCCGTCTaGGGCAGTGCTGGTGGATTT +
Preference number: 4 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEEQGGAV*GSAGGF
Trigger: AAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTG...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592199.6
3UTR CAA 72 bp CTCGTATATACTGCGTTTCTTAGCCTAAGAAGAAACTaGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGA +
Preference number: 4 (lower is better)
Translates to: LVYTAFLSLRRN*FDGTGGLCGPR
Trigger: TCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCTAAGAAACGCAGTATATACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGEVQG*CCGPGA
Trigger: AGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGACCCTCCCAAGGAACTaGAAGTCGGCGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEETLPRN*KSASRT
Trigger: CGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGT...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTTAAACTCTAAAATGTaGACGTTTCCTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRLNSKM*TFPSAL
Trigger: GAGGGCTGAAGGAAACGTTCACATTTTAGAGTTTAA...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGAGGGGAGCTGGGCGTaGTCATCCTCCCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLEGSWA*SSSPPS
Trigger: GGAGGGAGGGGAGGATGAGCACGCCCAGCTCCCCTC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CCA 90 bp AACACTTTTGAAAAGGACGACACCCAACACCCTCCCAAGGAACTGAAAGTCGGCTCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NTFEKDDTQHPPKELKVGSHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...GCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTGCTGTCCGGTGGCCTaGCCCGAGCCATCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLCCPVA*PEPSEH
Trigger: GTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGCGAATGCTGTCCGGTaGCCTGGCCCGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLANAVR*PGPSHP
Trigger: CGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTCTTGTGGCTTCCAGCTaGGTAGCAGGCACCGTTCGC +
Preference number: 4 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLLVASS*VAGTVR
Trigger: GCGAACGGTGCCTGCTACCCAGCTGGAAGCCACAAG...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTGTGTTTTACCTGTCAGCGTGGCTaGTCCTGTCCTGGAGCGTCG +
Preference number: 4 (lower is better)
Translates to: RGAMLIFSQRILTCALCFTCQRG*SCPGAS
Trigger: CGACGCTCCAGGACAGGACCAGCCACGCTGACAGGT...AAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCCCGGGGTCCGATGCTaGCAAACCGGTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLPGVRC*QTGWQR
Trigger: CCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGCTGCTGCCAGCTaGTGGGGAACGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRLAAAS*WGTACP
Trigger: GGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRRWTGC*QLLGNG
Trigger: GCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLTRWTG*CQLLGN
Trigger: GTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGGAGGCGCCTGTCGTTaGGAATGCTGTCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLGGACR*ECCPVA
Trigger: GGCCACCGGACAGCATTCGCAACGACAGGCGCCTCC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACGCCCCTTCAGAATTGTaGTGGTTGCTTTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDAPSEL*WLLCLG
Trigger: CCCCAAACAAAGCAACCAGCACAATTCTGAAGGGGC...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACCATGCGCGGGGAGCTaGCCTGAGAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRPCAGS*PERRGH
Trigger: GTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCATGG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp ACAATTAAGAAAGAGAGAGAAAGAGAGAGGCACAAGGACTCAAGAAGGGGCCAGCGCCGTCTGGGGCAGTaGTGGTGGATTTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: TIKKERERERHKDSRRGQRRLGQ*WWIWNQ
Trigger: CTGATTCCAAATCCACCAGCACTGCCCCAGACGGCG...CTGGCCCCTTCTTGAGTCCTTGTGCCTCTCTCTTTCTCTCTCTTTCTTAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATCACACCTTGTCAGCCTaGCGCAGGCAGTCAATCCGC +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNHTLSA*RRQSIR
Trigger: GCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGTG...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGATGCTGTCCGGTGGCCTaGCCCGAGCCATCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRCCPVA*PEPSEH
Trigger: GTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCA...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGCGAATGCTGTCCGGTaGCCTGGCCCGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRANAVR*PGPSHP
Trigger: CGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGTTTCTGCTTGGCTGCTaGTGCACAGCTCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSFLLGC*CTAPPR
Trigger: TCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAA...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCTCTCCCCCTCCTaGTCGGGAGCAGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRLLSPS*SGAAGG
Trigger: TCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CCA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAAATCGACCTGTCAGCGTaGCTGGTCCTGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNEIDLSA*LVLSWS
Trigger: GCTCCAGGACAGGACCAGCCACGCTGACAGGTCGAT...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGACAGGCAGCGGGTGGTaGGTGAAAGCCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLTGSGW*VKAMRG
Trigger: CCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGPGAP*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGCCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGAAGGGCTGAGTGGCTaGCGACGTGTAATTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GEEGSSASFLAFCPLLDREGLSG*RRVIFA
Trigger: AGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTC...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGACGTGGAGGGGAAGTaGAGGGCTGATGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLDVEGK*RADAVA
Trigger: GGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACCCCACCCCTACGTGGTaGAATGTTGATTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDPTPTW*NVDFLS
Trigger: TGAGAGAAAATCAACATTGCACCACGTAGGGGTGGG...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAAACAGGGAGCCCCTTCTaGTTCGCTCTCAGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNETGSPF*FALSSD
Trigger: GTCAGAGCTGAGAGCGAAGCAGAAGGGGCTCCCTGT...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGGTGGAACTCATCCTaGAGGCGGCAAGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGWNSS*RRQAGS
Trigger: GCTCCCGGCTTGCCGCCTGCAGGATGAGTTCCACCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587260.1
CDS-3UTR CCA 90 bp CTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACAGTCCTGGAAAGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LTSSVTFQTPEVTKQSWKVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...TTTCCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CGTGGTGCAATGTTGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTGTGTTTTCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: RGAMLIFSQRILTCALCFPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...AAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRGLRLL*DVQKVA
Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGAGCACAGGCAGCGGGTaGTGGGTGAAAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLSTGSG*WVKAMR
Trigger: GCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
3UTR CAA 72 bp AATACAGCCCATAGCCCACCCCTACGTGGTGCAATGTaGATTTTCTCTCAGAGGATCCTGACCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NTAHSPPLRGAM*IFSQRILTCAL
Trigger: CAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACGTAGGGGTGGGCTATGGGCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CAA 72 bp CAGTCCTGGAAACTTAAGTGCCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGCTGGTTTGAACTATCT +
Preference number: 4 (lower is better)
Translates to: QSWKLKCPLGSG*MSASPCWFELS
Trigger: AGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGAGAAAGCGCGGACGTaGGGCAGCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLREKART*GSSASM
Trigger: CATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAACGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNERWAVV*CPHLLA
Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEECNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGACGTGGAGGGGAAGTaGAGGGCTGATGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRDVEGK*RADAVA
Trigger: GGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRTWGAW*CWWKEG
Trigger: CCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGT...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCATCCACATCGTTaGGCCACCCGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRLHPHR*ATRWTG
Trigger: GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTACGGGCTCGACTGCTaGATGATGGACGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLYGLDC*MMDVEG
Trigger: CCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAATTTCTGCTTGGCTGCTaGTGCACAGCTCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: QIVPKLLKWRRSSHSNSKFLLGC*CTAPPR
Trigger: TCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAA...TTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGAGAGTCAGGCAAAGATaGTATAACAGAAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLRVRQR*YNRSAV
Trigger: CACTGCGCTTCTGTTATACCATCTTTGCCTGACTCT...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGCTCGACTGCTGGATaGTGGACGTGGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGSTAG*WTWRGS
Trigger: ACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLHKLLQ*VLPVVV
Trigger: CACCACCACGGGCAGGACTCACTGAAGGAGTTTGTG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGTCTCTCAGAGGATCCTaGCCTGTGCTTTGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRSLRGS*PVLCVF
Trigger: GAAAACACAAAGCACAGGTCAGGATCCTCTGAGAGA...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGAT +
Preference number: 4 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDMSASP*WFELSD
Trigger: ATCAGATAGTTCAAACCAGCAAGGAGATGCGGACAT...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGAT +
Preference number: 4 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLMSASP*WFELSD
Trigger: ATCAGATAGTTCAAACCAGCAAGGAGATGCGGACAT...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGGATGTTCAGAAAGTTaGCGTCCCGGGGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLGCSES*RPGVRC
Trigger: GCATCGGACCCCGGGACGGCAACTTTCTGAACATCC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp AACACTTTTGAAAAGGACGACACCCAACACCCTCCCAAGGAACTGAAAGTCGGCGAACTGAAAAATCATTaGACTTTGACCGCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: NTFEKDDTQHPPKELKVGELKNH*TLTARH
Trigger: GTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTC...GCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp TGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGAATCCTGTTGCCCTCATTaGCCCTCACAACACCACTTG +
Preference number: 4 (lower is better)
Translates to: CSNGGGVPIPTAKDPNNESCCPH*PSQHHL
Trigger: CAAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGA...TTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATTCTTATGTATCTCAGTaGAGAGACGGGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNSYVSQ*RDGGGG
Trigger: CCCTCCACCCCCGTCTCTGCACTGAGATACATAAGA...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGACTCCAATGTGATGTaGCTGGACGCACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRDSNVM*LDAQAG
Trigger: CCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp TCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SVILSPAPSHSRPRKSQNSASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...GTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCCGCCAGGGAGAAGTTaGGCCCTGATGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLPPGRS*ALMLLQ
Trigger: TTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTGTCATCGATGGACTTaGGGCGCTTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLCHRWT*GAWWCW
Trigger: CCAGCACCACCAAGCGCCCCAAGTCCATCGATGACA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGATACGGGCTCGACTGCTaGATGATGGACGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRYGLDC*MMDVEG
Trigger: CCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLRWAVV*CPHLLA
Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACACAAACTCCTTCAGTaGGTCCTGCCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRHKLLQ*VLPVVV
Trigger: CACCACCACGGGCAGGACTCACTGAAGGAGTTTGTG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGATGTTCAGAAAGTTaGCGTCCCGGGGTCCGATGC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGCSES*RPGVRC
Trigger: GCATCGGACCCCGGGACGGCAACTTTCTGAACATCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp CAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAGCCCCTTCAGAATTGTaGTGGTTGCTTTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QIVPKLLKWRRSSHSNSKAPSEL*WLLCLG
Trigger: CCCCAAACAAAGCAACCAGCACAATTCTGAAGGGGC...TTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGAACTCTCTGATGCATTaGACTTGGTTCAATGAAAAA +
Preference number: 4 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGNSLMH*TWFNEK
Trigger: TTTTTCATTGAACCAAGTGCAATGCATCAGAGAGTT...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRVPVGQ*FDVRIS
Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTCTCACTGTCATCGATaGACTTGGGGCGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLSHCHR*TWGAWW
Trigger: CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGACATTAGCCATTCAATaGAGAAGCCGGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRTLAIQ*RSRRES
Trigger: TGACTCTCTCCGGCTTCTCCATTGAATGGCTAATGT...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
3UTR CAA 72 bp CTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTaGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: LLPVVCYQIVPK*LKWRRSSHSNS
Trigger: GCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGATTGTGACTCCAATGTaGTGTGGCTGGACGCACAGG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLIVTPM*CGWTHR
Trigger: CCTGTGCGTCCAGCCACATCACATTGGAGTCACAAT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRRWAVV*CPHLLA
Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGAGAAGTTGGGCCCTaGTGCTGTTGCAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGEVGP*CCCNRS
Trigger: ACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACCAGGGTCACCTGGTTaGTGTTGTAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRPGSPG*CCSSWD
Trigger: GTCCCAGCTACTACAACATCAACCAGGTGACCCTGG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGGATAGGAAAACTCTCTaGTGCATTGCACTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRDRKTL*CIALGS
Trigger: TGAACCAAGTGCAATGCATCAGAGAGTTTTCCTATC...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR TCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGACTCATCCATTGATCTaGAGCACCCGGCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLTHPLI*STRQSP
Trigger: TGGGCTTTGCCGGGTGCTTCAGATCAATGGATGAGT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587760.5
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGAGGATCCTGACCTGTaGTTTGTGTTTTCATACAAT +
Preference number: 4 (lower is better)
Translates to: GEEGSSASFLAFCPLLDREDPDL*FVFSYN
Trigger: ATTGTATGAAAACACAAAGCACAGGTCAGGATCCTC...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGAGAGGAGAGGGCACTaGAGAAGTCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRERRGH*RSPAFL
Trigger: CAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGATGCAACAGGAGTCTGTaGTACTCTCACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRCNRSL*YSHQLR
Trigger: ACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCA...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR TCA 90 bp CAAATTGTTCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAGCTCCAAAACACTTTTaGAAAGGACGACACCCAACA +
Preference number: 4 (lower is better)
Translates to: QIVPKLLKWRRSSHSNSKAPKHF*KGRHPT
Trigger: TGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGC...TTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR GCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAAAATACGGGCTCGACTaGTGGATGATGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRKYGLD*WMMDVE
Trigger: CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR GCA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGAACTCTCTGATGCATTaGACTTGGTTCAATGAAAAA +
Preference number: 4 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLNSLMH*TWFNEK
Trigger: TTTTTCATTGAACCAAGTGCAATGCATCAGAGAGTT...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CCA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEESASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLGLRLL*DVQKVA
Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGGAGAGCTACTTCCTGTaGTGTGTTACCAAATTGTTC +
Preference number: 4 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWESYFL*CVTKLF
Trigger: GAACAATTTGGTAACACACCACAGGAAGTAGCTCTC...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR TCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGTGGAACTCATCCATTaGTCTGAAGCACCCGGCAAA +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRVELIH*SEAPGK
Trigger: TTTGCCGGGTGCTTCAGATCAATGGATGAGTTCCAC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587760.5
CDS-3UTR GCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCCCACCCCTACGTGGTaGAATGTTGATTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLPTPTW*NVDFLS
Trigger: TGAGAGAAAATCAACATTGCACCACGTAGGGGTGGG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGLRLL*DVQKVA
Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: LILLFLLSILSEEPGLRLSASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGTCACAAAACAGTCCTaGAAACTTAAGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRVTKQS*KLKCPL
Trigger: CAACGGGCACTTAAGTTTCCAGGACTGTTTTGTGAC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CCA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGATCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: LLILLFLLSILSEEPGLRSASPC*FELSDC
Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACCCTGGCCGCTACCGTaGGGCTGTCCGGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAPWPLP*GCPVAW
Trigger: CCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGGG...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CAA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGAGGAGGCGCCTGTCGTaGCGAATGCTGTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWRRRLS*RMLSGG
Trigger: GCCACCGGACAGCATTCGCAACGACAGGCGCCTCCT...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR CAA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGCGGGACGGGCGGCCTTaGCGGTCCGCGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRRDGRP*RSAMLV
Trigger: CACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCG...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCGGGACGGGCGGCCTTaGCGGTCCGCGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GRSWSLGREGGREGGREGRDGRP*RSAMLV
Trigger: CACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCG...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSAMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGCTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSALSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS GCA 90 bp GGGGGCTCCCTGCATCCACATCGTTGGGCCACCCGCTGGACTGGCTaGTGCCAGCTGCTGGGGAACGGCCTGTCCCGGGATAGAACACGT +
Preference number: 5 (lower is better)
Translates to: GGSLHPHRWATRWTG*CQLLGNGLSRDRTR
Trigger: ACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGGAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR CAA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCAAAAAATCATTGCACTTaGACCGCGCGTCACGCCCGG +
Preference number: 5 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAKNHCT*TARHAR
Trigger: CCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTT...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS TCA 90 bp CGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCTCCCTGCATCCACATCGTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: RARLLDDGRGGEVQG*CCGPGAPCIHIVGP
Trigger: TGGCCCAACGATGTGGATGCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR CAA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACTTTGTTTGGGGACTTaGTTCCTTCCCCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SEPPGPSGTQSAASAPPALCLGT*FLPQKA
Trigger: GGCCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAG...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGGGAGGGAGGGGACGTTaGTTCGTTGGCATTGACCTC +
Preference number: 5 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWGGRGR*FVGIDL
Trigger: GAGGTCAATGCCAACGAACAAACGTCCCCTCCCTCC...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGACAGGGAGCCCCTCCCTCGGGCTCTCGATaGGGGGACGAAAGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: EPSTVVEGKGTWAGQGAPPSGSR*GDESSR
Trigger: ACGAGAACTTTCGTCCCCCAATCGAGAGCCCGAGGG...AGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGGGCTGGCTGCCTACTaGCATTCCGCTAGGACACTG +
Preference number: 5 (lower is better)
Translates to: VPQSPSPRLSSRERARGPGLAAY*HSARTL
Trigger: CAGTGTCCTAGCGGAATGCAAGTAGGCAGCCAGCCC...CGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS GCA 90 bp GGCTCCCTGCATCCACATCGTTGGGCCACCCGCTGGACTGGCTGCTaGCAGCTGCTGGGGAACGGCCTGTCCCGGGATAGAACACGTCAT +
Preference number: 5 (lower is better)
Translates to: GSLHPHRWATRWTGC*QLLGNGLSRDRTRH
Trigger: ATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS-3UTR CAA 90 bp TCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCAAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: SEPPGPSGTQSAASAPPAKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...TGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCTCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWASAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGCCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: LVRVKLASGSKKGARGGEPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GACCTGGGGCCCGACTCCCCTCCCTCGTGGCAGGAAGGAGGCCCTCCTGGCCTGCTTTGTTTGGGGACTTaGTTCCTTCCCCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: DLGPDSPPSWQEGGPPGLLCLGT*FLPQKA
Trigger: GGCCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAG...CAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAAGAAGCTGGAGCCTaGGCAGAGAGGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGREEAGA*AEREGG
Trigger: CCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGACAGGGAGCCCCTTCCCCACATCTCCTGTaGCCCTCATTGCCCCTCACA +
Preference number: 5 (lower is better)
Translates to: EPSTVVEGKGTWAGQGAPSPHLL*PSLPLT
Trigger: TGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGGA...AGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCGGGGACGTTTGTTCGTaGGCATTGACCTCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWAGDVCS*ALTSAG
Trigger: CCCCGCAGAGGTCAATGCCAACGAACAAACGTCCCC...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCCGGAGGAAACTACCAACTaGCTGAGCGCGCTCCTGATA +
Preference number: 5 (lower is better)
Translates to: LVLLARLRGPLSAPPSGPEETTN*LSALLI
Trigger: TATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTC...CGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGCAGTGCTGGTGGATTaGGAATCAGGCATAGGAAGG +
Preference number: 5 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSAAVLVD*ESGIGR
Trigger: CCTTCCTATGCCTGATTCCAAATCCACCAGCACTGC...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRMLTNR*AEEAPV
Trigger: GACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCAT...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGGGATGTTCAGAAAGTaGCCGTCCCGGGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRGMFRK*PSRGPM
Trigger: CATCGGACCCCGGGACGGCAACTTTCTGAACATCCC...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGAAGAAGCTGGAGCCTaGGCAGAGAGGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LVRVKLASGSKKGARGGEEEAGA*AEREGG
Trigger: CCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAGCCCCAGGACTGCTCTaGCGGCTCAGGGTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGAPGLL*RLRVGC
Trigger: ACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGGC...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGGCCCCAGGACTGCTCTaGCGGCTCAGGGTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGAPGLL*RLRVGC
Trigger: ACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGGC...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGGGGGACGTTTGTTCGTaGGCATTGACCTCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: KLASGSKKGARGGEGGREGDVCS*ALTSAG
Trigger: CCCCGCAGAGGTCAATGCCAACGAACAAACGTCCCC...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTGGTGAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGAATGACCCCGGGACTTaGCCCTGGCCGCTACCGTTG +
Preference number: 5 (lower is better)
Translates to: LVRVKLASGSKKGARGGENDPGT*PWPLPL
Trigger: CAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATT...CTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS-3UTR CAA 90 bp CGGATGGTCGGGTGCGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAGCCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: RMVGCVKYGLDCWMMDVEPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...CTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCAGGAGGCGCCTGTCGTaGCGAATGCTGTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPRRRLS*RMLSGG
Trigger: GCCACCGGACAGCATTCGCAACGACAGGCGCCTCCT...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CAA 90 bp AGTCCCACAGAGCCCGAGCCCTCGACTGTCGTCGAGGGAAAGGGCACGTGGGCCAGCCTAAGAAGAAACTaGTTTGACGGGACGGGCGGC +
Preference number: 5 (lower is better)
Translates to: SPTEPEPSTVVEGKGTWASLRRN*FDGTGG
Trigger: GCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCT...GGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTGGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp AGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGGCCACCCCTGGCCGCTACCGTaGGGCTGTCCGGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SFPDFFREAGPASTSLGHPWPLP*GCPVAW
Trigger: CCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGGG...GTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CAA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGCATCTCCTTGCTGGTTaGAACTATCTGATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWHLLAG*NYLIVR
Trigger: CCGGACAATCAGATAGTTCAAACCAGCAAGGAGATG...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGCGAACTGAAAAATCATaGCACTTTGACCGCGCGTCA +
Preference number: 5 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWRTEKS*HFDRAS
Trigger: TGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTCG...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GGAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGAGCCTAAGAAGAAACTaGTTTGACGGGACGGGCGGC +
Preference number: 5 (lower is better)
Translates to: GRSWSLGREGGREGGREGSLRRN*FDGTGG
Trigger: GCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCT...CCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GAAGAAGCTGGAGCCTTGGCAGAGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGCTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: EEAGALAEREGGREGGKGWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...GCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGATCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGAATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GCCGTCTGGGGCAGTGCTGGTGGATTTGGAATCAGGCATAGGAAGGGGCACAGGATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AVWGSAGGFGIRHRKGHRMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...CCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CAA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCCTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPLSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTAGGAGGCGCCTGTCGTaGCGAATGCTGTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSRRRLS*RMLSGG
Trigger: GCCACCGGACAGCATTCGCAACGACAGGCGCCTCCT...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CAA 90 bp GCCGTCTGGGGCAGTGCTGGTGGATTTGGAATCAGGCATAGGAAGGGGCACAGGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: AVWGSAGGFGIRHRKGHRMLTNR*AEEAPV
Trigger: GACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCAT...CCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CAA 90 bp GAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGCGGGGGATGTTCAGAAAGTaGCCGTCCCGGGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: ERVRQRWYNRSAVTGAGRGMFRK*PSRGPM
Trigger: CATCGGACCCCGGGACGGCAACTTTCTGAACATCCC...CCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CGGAGCAGTCCAGCCGCCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACTGCTGGTTGCTTTGTTaGGGGACTTTGTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RSSPAAGGTPLSRSVKLNCWLLC*GTLFLP
Trigger: GGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCA...GTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGTCCCCACATCTCCTGTaGCCCTCATTGCCCCTCACA +
Preference number: 5 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWSPHLL*PSLPLT
Trigger: TGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGGA...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGGGGCTGGCTGCCTACTaGCATTCCGCTAGGACACTG +
Preference number: 5 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRGLAAY*HSARTL
Trigger: CAGTGTCCTAGCGGAATGCAAGTAGGCAGCCAGCCC...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp TGCTGGGGAACGGCCTGTCCCGGGATAGAACACGTCATCAACAGGGCTCTCCATAATGACCCCGGGACTTaGCCCTGGCCGCTACCGTTG +
Preference number: 5 (lower is better)
Translates to: CWGTACPGIEHVINRALHNDPGT*PWPLPL
Trigger: CAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATT...ATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS TCA 90 bp ACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTaGCAAACCGGTTGGCAGAGGAGGCGCCTGTCGTTGCGAATGCTG +
Preference number: 5 (lower is better)
Translates to: TAVGCSESCRPGVRC*QTGWQRRRLSLRML
Trigger: CAGCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp AGGACTGAGACTGCTGTGGGATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: RTETAVGCSESCRPGVRCSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...GCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CAA 90 bp AAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGGAGGGAGCTTTCTGTCCTCTACTaGACAGAGTCCATGTCGCGT +
Preference number: 5 (lower is better)
Translates to: KLASGSKKGARGGEGGRELSVLY*TESMSR
Trigger: ACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAG...CTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGAGCTCCAAAACACTTTaGAAAAGGACGACACCCAAC +
Preference number: 5 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRSSKTL*KRTTPN
Trigger: GTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCT...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCAAATTGTTCCCAAGTaGCTCAAATGGAGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRQIVPK*LKWRRS
Trigger: ACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTG...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGCCCTCGGGCTCTCGATaGGGGGACGAAAGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: PGARRCPVPLNSTKKGYAPSGSR*GDESSR
Trigger: ACGAGAACTTTCGTCCCCCAATCGAGAGCCCGAGGG...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGAGGAGGCGCCTGTCGTaGCGAATGAAGGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGRRRLS*RMKVME
Trigger: CTCCATCACCTTCATTCGCAACGACAGGCGCCTCCT...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592199.6
CDS GCA 90 bp ATGAACGGGTGGAACTCATCTCACACACACGCGCACAGACAACGTTaGCGTCCACACACACACGCTGCTGGTATCCCCGCCAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: MNGWNSSHTHAHRQR*RPHTHAAGIPARLC
Trigger: ACAGAGCCTGGCGGGGATACCAGCAGCGTGTGTGTGTGGACGGCAACGTTGTCTGTGCGCGTGTGTGTGAGATGAGTTCCACCCGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586873.1
CDS-3UTR CAA 90 bp ACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: TGLSISLSSMDLGRLVVLPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp TGCTGGGGAACGGCCTGTCCCGGGATAGAACACGTCATCAACAGGGCTCTCCATCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: CWGTACPGIEHVINRALHPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...ATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTTCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AAATACGGGCTCGACTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTGATTCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: KYGLDCWMMDVEGKCRADSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...ATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp CATCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: HQQGSPSHCHRWTWGAWWMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...CCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp TCAACAGGGCTCTCCATCTCACTGTCATCGATGGACTTGGGGCGCTTGGTGGTGGGGATGTTCAGAAAGTaGCCGTCCCGGGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: STGLSISLSSMDLGRLVVGMFRK*PSRGPM
Trigger: CATCGGACCCCGGGACGGCAACTTTCTGAACATCCC...CACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CAA 90 bp AGGGGGCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTGCTGGTTGCTTTGTTaGGGGACTTTGTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RGPVPGWDEAVESIPTFSCWLLC*GTLFLP
Trigger: GGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCA...GGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GGCCAGCGCGGGGGCGGGTGTATAAGGCAGTCGACAGGGCTGGTTGCGGGGTGGTGGTGTGTTACCAAATaGTTCCCAAGTTGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: GQRGGGCIRQSTGLVAGWWCVTK*FPSCSN
Trigger: ATTTGAGCAACTTGGGAACAATTTGGTAACACACCA...CCACCCCGCAACCAGCCCTGTCGACTGCCTTATACACCCGCCCCCGCGCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp TGGGGGAGTGGTGGGTCGTCTGAGCCACCCGGCCCCTCTGGGACCCAGAGCGCGATCCTGACCTGTGCTTaGTGTTTTCATACAATTAAG +
Preference number: 5 (lower is better)
Translates to: WGSGGSSEPPGPSGTQSAILTCA*CFHTIK
Trigger: CTTAATTGTATGAAAACACAAAGCACAGGTCAGGAT...CGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTGTCATCGATGGACTTGGGGCGCTTGGTGGTGCTGGTGGAAGGAGGGGAGGTGGCAGTGCTGGTGGATTaGGAATCAGGCATAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LSSMDLGRLVVLVEGGEVAVLVD*ESGIGR
Trigger: CCTTCCTATGCCTGATTCCAAATCCACCAGCACTGC...CACCTCCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CAA 90 bp TCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCGGGGACATCTCCTTGCTGGTTaGAACTATCTGATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: SDSSKHRQRVVGESHARGHLLAG*NYLIVR
Trigger: CCGGACAATCAGATAGTTCAAACCAGCAAGGAGATG...TCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp CCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGGCGGGGTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: PERVRQRWYNRSAVTGAGWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...CCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp ACACCCTCCCAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: TPSQGTESRRAGRLPKRRWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...CCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGGCCACCTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SFPDFFREAGPASTSLGHLSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...GTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp GTCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: VCDTLTSSVTFQTPEVTKPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...TTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp CTGCCTGGTCCTCCTCGCTCGGCTCCGGGGTCCCCTTTCTGCTCCACCCTCCGGCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: LPGPPRSAPGSPFCSTLRPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...CCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AACACTTTTGAAAAGGACGACACCCAACACCCTCCCAAGGAACTGAAAGTCGGCGCCCCAGGACTGCTCTaGCGGCTCAGGGTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: NTFEKDDTQHPPKELKVGAPGLL*RLRVGC
Trigger: ACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGGC...GCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGGGTCAAGTTGGCGTCTGGCTCAAAGAAGGGCGCTCGGGGCGGAGAGGGAGGCAAATTGTTCCCAAGTaGCTCAAATGGAGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: EGQVGVWLKEGRSGRRGRQIVPK*LKWRRS
Trigger: ACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTG...CCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCGGCTGTGGTGTGTTACCAAATaGTTCCCAAGTTGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: EQDAYLSAGGGLARQRRLWCVTK*FPSCSN
Trigger: ATTTGAGCAACTTGGGAACAATTTGGTAACACACCA...CAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGTTTGTTCGTTGGCATaGACCTCTGCGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPVCSLA*TSAGEG
Trigger: CCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAAC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: LLRLRVGCQNTLHSGTRNKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...GTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTAGCGCGGCAGCGGCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: VGEQDAYLSAGGGLARQRPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...CCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGACTTTCTGTCCTCTACTaGACAGAGTCCATGTCGCGT +
Preference number: 5 (lower is better)
Translates to: PVPGWDEAVESIPTFSYGLSVLY*TESMSR
Trigger: ACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAG...TCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCTTTCTGTCCTCTACTaGACAGAGTCCATGTCGCGT +
Preference number: 5 (lower is better)
Translates to: GVSEHPPFWDTQLAPGVTLSVLY*TESMSR
Trigger: ACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAG...GGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGGAGGGAGGGGACGTTaGTTCGTTGGCATTGACCTC +
Preference number: 5 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPGGRGR*FVGIDL
Trigger: GAGGTCAATGCCAACGAACAAACGTCCCCTCCCTCC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp ACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACAGTCCTGGAGGAGGCGCCTGTCGTaGCGAATGAAGGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: TLTSSVTFQTPEVTKQSWRRRLS*RMKVME
Trigger: CTCCATCACCTTCATTCGCAACGACAGGCGCCTCCT...CCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586797.5
CDS-3UTR CAA 90 bp GGGGTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCATCTCCTTGCTGGTTaGAACTATCTGATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: GVSEHPPFWDTQLAPGVTHLLAG*NYLIVR
Trigger: CCGGACAATCAGATAGTTCAAACCAGCAAGGAGATG...GGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp TCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACCTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SVILSPAPSHSRPRKSQNLSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...GTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLMLTNR*AEEAPV
Trigger: GACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCAT...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp ACCAACTTGCTGAGCGCGCTCCTGATAATGCTGGTGAGGGTCAAGTTGGCGTCTCTCCTGTTGCCCTCATaGCCCCTCACAACACCACTT +
Preference number: 5 (lower is better)
Translates to: TNLLSALLIMLVRVKLASLLLPS*PLTTPL
Trigger: AAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGAG...AGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp AGCTTTCCTGACTTCTTTAGAGAAGCCGGGCCTGCATCCACATCGTTGGGCCACTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: SFPDFFREAGPASTSLGHWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...GTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGGGATGTTCAGAAAGTaGCCGTCCCGGGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRGMFRK*PSRGPM
Trigger: CATCGGACCCCGGGACGGCAACTTTCTGAACATCCC...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTCTTTGTTTGGGGACTTaGTTCCTTCCCCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPLCLGT*FLPQKA
Trigger: GGCCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAG...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AGCCTGAGGGATCTAAACCCCATCATCTTTACAAGCTGGCCCTCCAGGCTCCCTGAGGAAACTACCAACTaGCTGAGCGCGCTCCTGATA +
Preference number: 5 (lower is better)
Translates to: SLRDLNPIIFTSWPSRLPEETTN*LSALLI
Trigger: TATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTC...AGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp ACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAACAGTCCTGGAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: TLTSSVTFQTPEVTKQSWKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...CCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp TCCCAAGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAATCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: SQVAQMEEEFPFQQQKTQSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...TTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSLSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRMLTNR*AEEAPV
Trigger: GACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCAT...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CCCAGGACTGCTCTTGCGGCTCAGGGTGGGGTGTCAGAACACCCTCCATTCTGGTGGTGTGTTACCAAATaGTTCCCAAGTTGCTCAAAT +
Preference number: 5 (lower is better)
Translates to: PRTALAAQGGVSEHPPFWWCVTK*FPSCSN
Trigger: ATTTGAGCAACTTGGGAACAATTTGGTAACACACCA...CCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CAAGGAACTGAAAGTCGGCGAGCAGGACGCCTACCTAAGCGCAGGTGGTGGCTTCTACGTGGTGCAATGTaGATTTTCTCTCAGAGGATC +
Preference number: 5 (lower is better)
Translates to: QGTESRRAGRLPKRRWWLLRGAM*IFSQRI
Trigger: GATCCTCTGAGAGAAAATCAACATTGCACCACGTAG...AAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAAAAATCATTGCACTTaGACCGCGCGTCACGCCCGG +
Preference number: 5 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDKNHCT*TARHAR
Trigger: CCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTT...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCTCCTGTTGCCCTCATaGCCCCTCACAACACCACTT +
Preference number: 5 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLLLLPS*PLTTPL
Trigger: AAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGAG...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS CCA 90 bp CTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCTGGCAGGCTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: LKCPLGSGLMSASPC*FELSDCPDSGRLFG
Trigger: CCCAAAGAGCCTGCCAGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588680.1
CDS CCA 90 bp CTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCTTGTCAGCCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: LKCPLGSGLMSASPC*FELSDCPDSCQPGA
Trigger: TGCGCCAGGCTGACAAGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585382.5
CDS-3UTR CAA 90 bp GAGAAGCCGGAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACGGGGCATCTCCTTGCTGGTTaGAACTATCTGATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: EKPERVRQRWYNRSAVTGHLLAG*NYLIVR
Trigger: CCGGACAATCAGATAGTTCAAACCAGCAAGGAGATG...CCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTTCAGAATTGTGCTGGTTGCTTTGTTTGGGGACTTTGTTCCTTCCCCAGAAGGCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LQNCAGCFVWGLCSFPRRPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...CCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACCCCGGAAGTCACAAAATGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: VCDTLTSSVTFQTPEVTKWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...TTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp GCGGGGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTCTACGTGGTGCAATGTaGATTTTCTCTCAGAGGATC +
Preference number: 5 (lower is better)
Translates to: AGSGGGRQFCILSCFLSSLRGAM*IFSQRI
Trigger: GATCCTCTGAGAGAAAATCAACATTGCACCACGTAG...AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GTGTCAGAACACCCTCCATTCTGGGACACGCAACTAGCTCCAGGGGTCACCCCCGTTCTCGTGACTTTATaGCTCCTTTATTTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: VSEHPPFWDTQLAPGVTPVLVTL*LLYFLS
Trigger: CGAGAGAAAATAAAGGAGCAATAAAGTCACGAGAAC...GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp GCCTGTCCCAGGCTGGGACGAGGCCGTCGAGAGCATTCCGACTTTTTCCTACGGGACAGTAAACTACCCTaGTTTCTTATGTATCTCAGT +
Preference number: 5 (lower is better)
Translates to: ACPRLGRGRREHSDFFLRDSKLP*FLMYLS
Trigger: ACTGAGATACATAAGAAACAAGGGTAGTTTACTGTC...CCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGAGGAGGCGCCTGTCGTaGCGAATGCTGTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLRRRLS*RMLSGG
Trigger: GCCACCGGACAGCATTCGCAACGACAGGCGCCTCCT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNMLTNR*AEEAPV
Trigger: GACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCAT...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp AGTTGCTCAAATGGAGGAGGAGTTCCCATTCCAACAGCAAAAGACCCAAACAATGGGATGTTCAGAAAGTaGCCGTCCCGGGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: SCSNGGGVPIPTAKDPNNGMFRK*PSRGPM
Trigger: CATCGGACCCCGGGACGGCAACTTTCTGAACATCCC...ATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS GCA 90 bp AAACTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGATTGTCCGGATTCTTGTCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: KLKCPLGSGLMSASP*WFELSDCPDSCQPG
Trigger: GCCAGGCTGACAAGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585382.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACCTGCATCCACATCGTaGGGCCACCCGCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRPASTS*GHPLDW
Trigger: CCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAAGGAGGCGCCTGTCGTaGCGAATGCTGTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRRRRLS*RMLSGG
Trigger: GCCACCGGACAGCATTCGCAACGACAGGCGCCTCCT...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp GGAGAGCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGCTGGTGAGGGTCAAGTaGGCGTCTGGCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GELLPVVCYQIVPKLLKWLVRVK*ASGSKK
Trigger: CTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG...CCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CCGGGGGCACGCCGCTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATGCGGACAGTAAACTACCCTaGTTTCTTATGTATCTCAGT +
Preference number: 5 (lower is better)
Translates to: PGARRCPVPLNSTKKGYADSKLP*FLMYLS
Trigger: ACTGAGATACATAAGAAACAAGGGTAGTTTACTGTC...CGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS GCA 90 bp AAACTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGATTGTCCGGATTCTGGCAGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: KLKCPLGSGLMSASP*WFELSDCPDSGRLF
Trigger: AAAGAGCCTGCCAGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588680.1
CDS-3UTR CAA 90 bp ATGCTGTTGCAACAGGAGTCTGTGATACTCTCACCAGCTCCGTCACATTCCAGACATCTCCTTGCTGGTTaGAACTATCTGATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: MLLQQESVILSPAPSHSRHLLAG*NYLIVR
Trigger: CCGGACAATCAGATAGTTCAAACCAGCAAGGAGATG...TCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585382.5
ENST00000586797.5
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLLSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLMLTNR*AEEAPV
Trigger: GACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCAT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACATTGTGCTGGTTGCTTaGTTTGGGGACTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDIVLVA*FGDFVP
Trigger: AGGAACAAAGTCCCCAAACAAAGCAACCAGCACAAT...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGAAGAAGCTGGAGCCTaGGCAGAGAGGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLREEAGA*AEREGG
Trigger: CCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CAA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGACGAACTGAAAAATCATaGCACTTTGACCGCGCGTCA +
Preference number: 5 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRRTEKS*HFDRAS
Trigger: TGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTCG...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGGTTTGTTCGTTGGCATaGACCTCTGCGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLVCSLA*TSAGEG
Trigger: CCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAAC...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360105.8
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGATCCGCCAGGGAGAAGTaGGGCCCTGATGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRSAREK*GPDAVA
Trigger: TGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGGA...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAATGGACTTGGGGCGCTaGGTGGTGCTGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRMDLGR*VVLVEG
Trigger: TCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCAT...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTCATCGATGGACTaGGGGCGCTTGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRLSSMD*GRLVVL
Trigger: CAGCACCACCAAGCGCCCCAAGTCCATCGATGACAG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAGGGATGTTCAGAAAGTaGCCGTCCCGGGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRGMFRK*PSRGPM
Trigger: CATCGGACCCCGGGACGGCAACTTTCTGAACATCCC...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp GGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAATTGTGCTGGTTGCTTaGTTTGGGGACTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: GEEGSSASFLAFCPLLDRIVLVA*FGDFVP
Trigger: AGGAACAAAGTCCCCAAACAAAGCAACCAGCACAAT...TCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRPLGSG*MSASPC
Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp GCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGATTGTGCTGGTTGCTTaGTTTGGGGACTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: AVLHPFLLSVLYLTESMSIVLVA*FGDFVP
Trigger: AGGAACAAAGTCCCCAAACAAAGCAACCAGCACAAT...CGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGACGTTCTCGTGACTTTATaGCTCCTTTATTTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: QGEEGSSASFLAFCPLLDVLVTL*LLYFLS
Trigger: CGAGAGAAAATAAAGGAGCAATAAAGTCACGAGAAC...GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGTGGGCCCTGATGCTGTaGCAACAGGAGTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLWALML*QQESVI
Trigger: TATCACAGACTCCTGTTGCAACAGCATCAGGGCCCA...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp GGTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: GQGEEGSSASFLAFCPLLPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...AAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GTCAGGGGGAGGAAGGCAGTTCTGCATCCTTTCTTGCTTTCTGTCCTCTACTTGCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: VRGRKAVLHPFLLSVLYLPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...CAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CTTGCTTTCTGTCCTCTACTTGACAGAGTCCATGTCGCGTGTTTCTTTCTGCTTAGCTCCAAAACACTTTaGAAAAGGACGACACCCAAC +
Preference number: 5 (lower is better)
Translates to: LAFCPLLDRVHVACFFLLSSKTL*KRTTPN
Trigger: GTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCT...AAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp GCTACTTCCTGTGGTGTGTTACCAAATTGTTCCCAAGTTGCTCAAATGGAGGAGAGCTCCAAAACACTTTaGAAAAGGACGACACCCAAC +
Preference number: 5 (lower is better)
Translates to: ATSCGVLPNCSQVAQMEESSKTL*KRTTPN
Trigger: GTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCT...CTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360105.8
ENST00000397661.6
ENST00000592199.6
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGAAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRKLKCP*GSGLMS
Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000586797.5
ENST00000587260.1
ENST00000587760.5
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTTTCTGTCCTCTACTaGACAGAGTCCATGTCGCGT +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRLSVLY*TESMSR
Trigger: ACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAG...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CAA 90 bp CTTCTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGATGCTGGTTGCTTTGTTaGGGGACTTTGTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LLILLFLLSILSEEPGLRCWLLC*GTLFLP
Trigger: GGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCA...TCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000397661.6
CDS-3UTR CAA 90 bp ACAATTAAGAAAGAGAGAGAAAGAGAGAGGCACAAGGACTCAAGAAGGGGCCAGATCCTGACCTGTGCTTaGTGTTTTCATACAATTAAG +
Preference number: 5 (lower is better)
Translates to: TIKKERERERHKDSRRGQILTCA*CFHTIK
Trigger: CTTAATTGTATGAAAACACAAAGCACAGGTCAGGAT...CTGGCCCCTTCTTGAGTCCTTGTGCCTCTCTCTTTCTCTCTCTTTCTTAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360105.8
ENST00000592199.6
CDS-3UTR CAA 90 bp CTCATTTTGTTGTTTCTTTTGTCGATCTTATCAGAGGAACCAGGACTGAGACTGCCTCTTCTTCTCATTTaGTTGTTTCTTTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: LILLFLLSILSEEPGLRLPLLLI*LFLLSI
Trigger: GATCGACAAAAGAAACAACAAAATGAGAAGAAGAGG...CAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS CCA 72 bp CGGGGTCCGCGGTCCCCACTCTCCACTCAGCACCCATaGCGGTTCCGTCGTCGGAGCCAGCCTGGTACATGC +
Preference number: 6 (lower is better)
Translates to: RGPRSPLSTQHP*RFRRRSQPGTC
Trigger: GCATGTACCAGGCTGGCTCCGACGACGGAACCGCCATGGGTGCTGAGTGGAGAGTGGGGACCGCGGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590027.1
CDS TCA 72 bp CTGCTGGATGATGGACGTGGAGGGGAAGTGCAGGGCTaGTGCTGTGGCCCGGGGGCTCCCTGCATCCACATC +
Preference number: 6 (lower is better)
Translates to: LLDDGRGGEVQG*CCGPGAPCIHI
Trigger: GATGTGGATGCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358552.7
ENST00000360105.8
CDS CAA 72 bp AAGTTGCCGTCCCGGGGTCCGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTCGTTGCGAATGCTGTC +
Preference number: 6 (lower is better)
Translates to: KLPSRGPMLTNR*AEEAPVVANAV
Trigger: GACAGCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS CAA 90 bp ATGTTCAGAAAGTTGCCGTCCCGGGGTCCGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTCGTTGCGAATGCTGTCCGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: MFRKLPSRGPMLTNR*AEEAPVVANAVRWP
Trigger: AGGCCACCGGACAGCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358552.7
ENST00000360105.8
ENST00000397661.6
ENST00000587260.1
ENST00000587760.5
CDS CAA 90 bp GATGAACGGGTGGAACTCATCTCACACACACGCGCACAGACAACGTaGCCGTCCACACACACACGCTGCTGGTATCCCCGCCAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: DERVELISHTRAQTT*PSTHTRCWYPRQAL
Trigger: CAGAGCCTGGCGGGGATACCAGCAGCGTGTGTGTGTGGACGGCAACGTTGTCTGTGCGCGTGTGTGTGAGATGAGTTCCACCCGTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586873.1
CDS TCA 72 bp TCCGGATTCTGGCAGGCTCTTTGGGGAGCCTTGCCTTaGGGTCTACACCTGCTCTGGACAGGTGACAGGAGC +
Preference number: 6 (lower is better)
Translates to: SGFWQALWGALP*GLHLLWTGDRS
Trigger: GCTCCTGTCACCTGTCCAGAGCAGGTGTAGACCTCAAGGCAAGGCTCCCCAAAGAGCCTGCCAGAATCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588680.1
CDS GCA 72 bp TGGAACTCATCTCACACACACGCGCACAGACAACGTTaGCGTCCACACACACACGCTGCTGGTATCCCCGCC +
Preference number: 6 (lower is better)
Translates to: WNSSHTHAHRQR*RPHTHAAGIPA
Trigger: GGCGGGGATACCAGCAGCGTGTGTGTGTGGACGGCAACGTTGTCTGTGCGCGTGTGTGTGAGATGAGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586873.1
CDS CAA 72 bp GTGGAACTCATCTCACACACACGCGCACAGACAACGTaGCCGTCCACACACACACGCTGCTGGTATCCCCGC +
Preference number: 6 (lower is better)
Translates to: VELISHTRAQTT*PSTHTRCWYPR
Trigger: GCGGGGATACCAGCAGCGTGTGTGTGTGGACGGCAACGTTGTCTGTGCGCGTGTGTGTGAGATGAGTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586873.1
CDS CCA 72 bp CCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: PLGSGLMSASPC*FELSDCPDSGR
Trigger: CCTGCCAGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588680.1
CDS CCA 72 bp CCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: PLGSGLMSASPC*FELSDCPDSCQ
Trigger: CTGACAAGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585382.5