Pregenerated sensors for NECAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000089818Ensembl transcript IDs: ENST00000537796.2, ENST00000540083.1, ENST00000542095.6, ENST00000544891.6, ENST00000545807.6, ENST00000546181.2, ENST00000638334.1, ENST00000638883.1, ENST00000639955.1, ENST00000640072.1, ENST00000640099.1, ENST00000640481.1, ENST00000640648.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACTAGAACTCTTCCAAAAGACTCTATGTGACCTGCATATCCATTaGTTCTCCAGATCAAAGATTTCAATTGACTGTACATATCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: SLELFQKTLCDLHIH*FSRSKISIDCTYLL Trigger: TAGGAGATATGTACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGATATGCAGGTCACATAGAGTCTTTTGGAAGAGTTCTAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| 3UTR-3UTR TCA 90 bp | TCATGGCAATTCTACTTACAAAGGCCTGAAATATCCCACTCAAACCTCATCCTACTCCTACACCCTGATTaGGAGTATGCTAGTTTCACT | + |
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Preference number: 2 (lower is better) Translates to: SWQFYLQRPEISHSNLILLLHPD*EYASFT Trigger: AGTGAAACTAGCATACTCTCAATCAGGGTGTAGGAG...TAGGATGAGGTTTGAGTGGGATATTTCAGGCCTTTGTAAGTAGAATTGCCATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| 3UTR CAA 90 bp | TATGTGACCTGCATATCCATTGCTTCTCCAGATCAAAGATTTCAATaGACTGTACATATCTCCTACACCCTGATTGAGAGTATGCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: YVTCISIASPDQRFQ*TVHISYTLIESMLV Trigger: AACTAGCATACTCTCAATCAGGGTGTAGGAGATATGTACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGATATGCAGGTCACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| 3UTR TCA 72 bp | AAACCACACTTCATGGCAATTCTACTTACAAAGGCCTaGAATATCCCACTCAAACCTCATCCTACAGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: KPHFMAILLTKA*NIPLKPHPTAF Trigger: AAAAGCTGTAGGATGAGGTTTGAGTGGGATATTTCAGGCCTTTGTAAGTAGAATTGCCATGAAGTGTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| 3UTR TCA 72 bp | ATTTCCTTCACTAGAACTCTTCCAAAAGACTCTATGTaGCCTGCATATCCATTGCTTCTCCAGATCAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: ISFTRTLPKDSM*PAYPLLLQIKD Trigger: ATCTTTGATCTGGAGAAGCAATGGATATGCAGGTCACATAGAGTCTTTTGGAAGAGTTCTAGTGAAGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| 3UTR GCA 72 bp | CTCTTCCAAAAGACTCTATGTGACCTGCATATCCATTaGTTCTCCAGATCAAAGATTTCAATTGACTGTACA | + |
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Preference number: 3 (lower is better) Translates to: LFQKTLCDLHIH*FSRSKISIDCT Trigger: TGTACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGATATGCAGGTCACATAGAGTCTTTTGGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR TCA 90 bp | TATGTGACCTGCATATCCATTGCTTCTCCAGATCAAAGATTTCAATTGACTGTAGGTGGTGGGGTGACATaGTTGCTGATGGCAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: YVTCISIASPDQRFQLTVGGGVT*LLMATE Trigger: CTCAGTTGCCATCAGCAATCATGTCACCCCACCACC...TACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGATATGCAGGTCACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR GCA 90 bp | TGGCAATTCTACTTACAAAGGCCTGAAATATCCCACTCAAACCTCATCCTACAGAGACTCTATGTGACCTaGATATCCATTGCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WQFYLQRPEISHSNLILQRLYVT*ISIASP Trigger: TGGAGAAGCAATGGATATGCAGGTCACATAGAGTCT...CTGTAGGATGAGGTTTGAGTGGGATATTTCAGGCCTTTGTAAGTAGAATTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR GCA 90 bp | ATCCATTGCTTCTCCAGATCAAAGATTTCAATTGACTGTACATATCTCCTACACGGTTTGGAACAGAGCTaGAAGACAGGAGAACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IHCFSRSKISIDCTYLLHGLEQS*KTGEQR Trigger: TCTCTGTTCTCCTGTCTTGCAGCTCTGTTCCAAACC...GTGTAGGAGATATGTACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR TCA 90 bp | ATCCATTGCTTCTCCAGATCAAAGATTTCAATTGACTGTACATATCTCCTACACCTCCTACACCCTGATTaGGAGTATGCTAGTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: IHCFSRSKISIDCTYLLHLLHPD*EYASFT Trigger: AGTGAAACTAGCATACTCTCAATCAGGGTGTAGGAG...GTGTAGGAGATATGTACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR TCA 90 bp | AGCACTACTATATTTCCTTCACTAGAACTCTTCCAAAAGACTCTATGTGACCTGCCAAAAGACTCTATGTaGCCTGCATATCCATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: STTIFPSLELFQKTLCDLPKDSM*PAYPLL Trigger: AAGCAATGGATATGCAGGTCACATAGAGTCTTTTGG...CAGGTCACATAGAGTCTTTTGGAAGAGTTCTAGTGAAGGAAATATAGTAGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR TCA 90 bp | TTCTACTTACAAAGGCCTGAAATATCCCACTCAAACCTCATCCTACAGCTTTTTCTACTTACAAAGGCCTaGAATATCCCACTCAAACCT | + |
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Preference number: 4 (lower is better) Translates to: FYLQRPEISHSNLILQLFLLTKA*NIPLKP Trigger: AGGTTTGAGTGGGATATTTCAGGCCTTTGTAAGTAG...AAAAAGCTGTAGGATGAGGTTTGAGTGGGATATTTCAGGCCTTTGTAAGTAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR GCA 90 bp | TATGTGACCTGCATATCCATTGCTTCTCCAGATCAAAGATTTCAATTGACTGTAATGCTAGTTTCACTATaGCCATTACCTGGAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: YVTCISIASPDQRFQLTVMLVSL*PLPGGS Trigger: ACTGCCTCCAGGTAATGGGCATAGTGAAACTAGCAT...TACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGATATGCAGGTCACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS-3UTR CCA 90 bp | TGGCAATTCTACTTACAAAGGCCTGAAATATCCCACTCAAACCTCATCCTACAGCAAAACCACACTTCATaGCAATTCTACTTACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: WQFYLQRPEISHSNLILQQNHTS*QFYLQR Trigger: CCTTTGTAAGTAGAATTGCCATGAAGTGTGGTTTTG...CTGTAGGATGAGGTTTGAGTGGGATATTTCAGGCCTTTGTAAGTAGAATTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS GCA 90 bp | ACTCGTACTCCAACTCGGTCGCCATCTTGGGTCCGCTGTCGGCGCTaGCGGGGGCGAAACGTAAGACCGGAGGCGGAGCACGGGAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: TRTPTRSPSWVRCRR*RGRNVRPEAEHGRR Trigger: CCGCCTCCCGTGCTCCGCCTCCGGTCTTACGTTTCGCCCCCGGCAGCGCCGACAGCGGACCCAAGATGGCGACCGAGTTGGAGTACGAGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS GCA 90 bp | CGGGGGCGAAACGTAAGACCGGAGGCGGAGCACGGGAGGCGGAGATaGAAAGCGCGACAACTTCTGTTGCGTCACTTCCGCGCGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: RGRNVRPEAEHGRRR*KARQLLLRHFRASS Trigger: TGAACTCGCGCGGAAGTGACGCAACAGAAGTTGTCGCGCTTTGCATCTCCGCCTCCCGTGCTCCGCCTCCGGTCTTACGTTTCGCCCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS TCA 90 bp | GCTTCATTGTATTTACAGCCGCTCCCCGTCACTTGCATGACCACCTaGGCTCCGCCTCCTGTCAGATCAGTGGCAGCATTAGATTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ASLYLQPLPVTCMTT*APPPVRSVAALDSQ Trigger: CTGAGAATCTAATGCTGCCACTGATCTGACAGGAGGCGGAGCTCAGGTGGTCATGCAAGTGACGGGGAGCGGCTGTAAATACAATGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS GCA 90 bp | TCCTGGAGAGGTGCTTACGAAAAGCGCCATCTTACTCTAGGCAGGTaGCTGGAGTGTCCTACGAGGACGAGGACCATATTGAATCGTGAC | + |
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Preference number: 5 (lower is better) Translates to: SWRGAYEKRHLTLGR*LECPTRTRTILNRD Trigger: GTCACGATTCAATATGGTCCTCGTCCTCGTAGGACACTCCAGGCACCTGCCTAGAGTAAGATGGCGCTTTTCGTAAGCACCTCTCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS GCA 90 bp | ATGAGGCTGCACGGCTCACCGTCTTGGATAATGGCAAAGATGGCCTaGAAGTGCGTGACTCTCGTTATGGAAATCTCTGTCCTGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: MRLHGSPSWIMAKMA*KCVTLVMEISVLER Trigger: CCTCTCCAGGACAGAGATTTCCATAACGAGAGTCACGCACTTGCAGGCCATCTTTGCCATTATCCAAGACGGTGAGCCGTGCAGCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS GCA 90 bp | TGCAAGTGCGTGACTCTCGTTATGGAAATCTCTGTCCTGGAGAGGTaGTTACGAAAAGCGCCATCTTACTCTAGGCAGGTGCCTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: CKCVTLVMEISVLER*LRKAPSYSRQVPGV Trigger: CACTCCAGGCACCTGCCTAGAGTAAGATGGCGCTTTTCGTAAGCACCTCTCCAGGACAGAGATTTCCATAACGAGAGTCACGCACTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS GCA 90 bp | CTGCACGGCTCACCGTCTTGGATAATGGCAAAGATGGCCTGCAAGTaGGTGACTCTCGTTATGGAAATCTCTGTCCTGGAGAGGTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: LHGSPSWIMAKMACK*VTLVMEISVLERCL Trigger: TAAGCACCTCTCCAGGACAGAGATTTCCATAACGAGAGTCACGCACTTGCAGGCCATCTTTGCCATTATCCAAGACGGTGAGCCGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS TCA 90 bp | CAGGTGCCTGGAGTGTCCTACGAGGACGAGGACCATATTGAATCGTaGCGGATTTTCTTACAGGAGTCACTTCCTAACTGTAGTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QVPGVSYEDEDHIES*RIFLQESLPNCSLL Trigger: CAGGAGACTACAGTTAGGAAGTGACTCCTGTAAGAAAATCCGTCACGATTCAATATGGTCCTCGTCCTCGTAGGACACTCCAGGCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS TCA 90 bp | ACTTCAGAGAGTCCTAAGGCAGAAAAGGAGAGATATGCTTGCTCTTaGGGTAGGAAGCTGACAGTGTGCACAGTGCTGTCAACCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: TSESPKAEKERYACS*GRKLTVCTVLSTTA Trigger: AGCTGTGGTTGACAGCACTGTGCACACTGTCAGCTTCCTACCTCAAGAGCAAGCATATCTCTCCTTTTCTGCCTTAGGACTCTCTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000537796.2 ENST00000542095.6 ENST00000544891.6 ENST00000545807.6 ENST00000640099.1 ENST00000640481.1 ENST00000640648.1 |
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| CDS-3UTR CAA 90 bp | ATCCATTGCTTCTCCAGATCAAAGATTTCAATTGACTGTACATATCTCCTACACGGGGGAATAGTGACTTaGCCTCCTGGCGGGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: IHCFSRSKISIDCTYLLHGGIVT*PPGGGG Trigger: CCCACCCCCGCCAGGAGGCAAAGTCACTATTCCCCC...GTGTAGGAGATATGTACAGTCAATTGAAATCTTTGATCTGGAGAAGCAATGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS CCA 90 bp | AGAAATCTCACGGAATACGTATTAGAATTGCCCCTTCCAGAAGGATaGTATTTAGCCACCAATTCCCATTCCCCACAGTTGAGGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RNLTEYVLELPLPEG*YLATNSHSPQLRAA Trigger: AGCAGCCCTCAACTGTGGGGAATGGGAATTGGTGGCTAAATACCATCCTTCTGGAAGGGGCAATTCTAATACGTATTCCGTGAGATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000537796.2 ENST00000542095.6 ENST00000544891.6 ENST00000545807.6 ENST00000640099.1 ENST00000640481.1 ENST00000640648.1 |
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| CDS CCA 90 bp | AGAGGCCCTTTGCTCACTGGTAAAACTGCTGAAGGAAAAACCGAATaGTGGATGATGACAGTTGGTGACGAAATTGACAACAGTACAAAA | + |
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Preference number: 5 (lower is better) Translates to: RGPLLTGKTAEGKTE*WMMTVGDEIDNSTK Trigger: TTTTGTACTGTTGTCAATTTCGTCACCAACTGTCATCATCCACCATTCGGTTTTTCCTTCAGCAGTTTTACCAGTGAGCAAAGGGCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540083.1 |
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| CDS TCA 90 bp | AGATCAAAGATTTCAATTGACTGTACATATCTCCTACACCCTGATTaGGAGTATGCTAGTTTCACTATGCCCATTACCTGGAGGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: RSKISIDCTYLLHPD*EYASFTMPITWRQC Trigger: GCACTGCCTCCAGGTAATGGGCATAGTGAAACTAGCATACTCTCAATCAGGGTGTAGGAGATATGTACAGTCAATTGAAATCTTTGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS GCA 90 bp | TTGCCAACCTCTGTTATAGACCATGGAGAAAAGAGTAAGAATGACTaGCCCACACGTAAGATGATTCAAGATAGTCCCACCAAAAACTAC | + |
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Preference number: 5 (lower is better) Translates to: LPTSVIDHGEKSKND*PTRKMIQDSPTKNY Trigger: GTAGTTTTTGGTGGGACTATCTTGAATCATCTTACGTGTGGGGCAGTCATTCTTACTCTTTTCTCCATGGTCTATAACAGAGGTTGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS CCA 90 bp | GTCGATAAACTACATAGAGCCCATGGGCTTTATCCTGCCATAGCCTaGTTTTGTAGAAGAAGTTTCATGGAACATAGTGGTATCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: VDKLHRAHGLYPAIA*FCRRSFMEHSGINV Trigger: CACATTGATACCACTATGTTCCATGAAACTTCTTCTACAAAACCAGGCTATGGCAGGATAAAGCCCATGGGCTCTATGTAGTTTATCGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS TCA 90 bp | CATCACCCCCGTCTAGTTGCAGGAAAACAAGCCCAAGGCTCCCGCTaGTTCTACATTATAGTGAGTTGTATAATTATTTCATTATACATT | + |
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Preference number: 5 (lower is better) Translates to: HHPRLVAGKQAQGSR*FYIIVSCIIISLYI Trigger: AATGTATAATGAAATAATTATACAACTCACTATAATGTAGAATCAGCGGGAGCCTTGGGCTTGTTTTCCTGCAACTAGACGGGGGTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS TCA 90 bp | AATAGAAATAAAGTGTACAATAAATGTGATGCACTTGAATCATCCTaGAACCATCCCCTAATGCCGGTCTGTGGAAAACTGTCTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: NRNKVYNKCDALESS*NHPLMPVCGKLSST Trigger: TGTGGAAGACAGTTTTCCACAGACCGGCATTAGGGGATGGTTTCAGGATGATTCAAGTGCATCACATTTATTGTACACTTTATTTCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS TCA 90 bp | CTTACTAAGGAAATAGCTGATTTCCAGAGTGATGAGCTTATTCATTaGAGAGCCTTAGAGGACATTTCTTACACCCCAGATTGTCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: LTKEIADFQSDELIH*RALEDISYTPDCQK Trigger: TTTTTGACAATCTGGGGTGTAAGAAATGTCCTCTAAGGCTCTTCAATGAATAAGCTCATCACTCTGGAAATCAGCTATTTCCTTAGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639955.1 |
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| CDS GCA 72 bp | CCAACTCGGTCGCCATCTTGGGTCCGCTGTCGGCGCTaGCGGGGGCGAAACGTAAGACCGGAGGCGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PTRSPSWVRCRR*RGRNVRPEAEH Trigger: GTGCTCCGCCTCCGGTCTTACGTTTCGCCCCCGGCAGCGCCGACAGCGGACCCAAGATGGCGACCGAGTTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000546181.2 ENST00000639955.1 ENST00000640648.1 |
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| CDS CCA 72 bp | CTATGGCAGGAGCCCCCAACCCCCGGCACCAGTCTGTaGCCTGTTAGAAACCAGGCCATGCAGCAGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LWQEPPTPGTSL*PVRNQAMQQEV Trigger: CACCTCCTGCTGCATGGCCTGGTTTCTAACAGGCCACAGACTGGTGCCGGGGGTTGGGGGCTCCTGCCATAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS GCA 72 bp | AACGTAAGACCGGAGGCGGAGCACGGGAGGCGGAGATaGAAAGCGCGACAACTTCTGTTGCGTCACTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: NVRPEAEHGRRR*KARQLLLRHFR Trigger: GCGGAAGTGACGCAACAGAAGTTGTCGCGCTTTGCATCTCCGCCTCCCGTGCTCCGCCTCCGGTCTTACGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CCA 72 bp | ATTAGCTGGTTATGGTGGCGTGCGCCTGAAATCCCTTaGGAGGCTGAGGCAGAATCAACTGAACCTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ISWLWWRAPEIP*EAEAESTEPGR Trigger: CCTCCCAGGTTCAGTTGATTCTGCCTCAGCCTCCCAAGGGATTTCAGGCGCACGCCACCATAACCAGCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640072.1 |
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| CDS GCA 72 bp | GGTGCTTACGAAAAGCGCCATCTTACTCTAGGCAGGTaGCTGGAGTGTCCTACGAGGACGAGGACCATATTG | + |
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Preference number: 6 (lower is better) Translates to: GAYEKRHLTLGR*LECPTRTRTIL Trigger: CAATATGGTCCTCGTCCTCGTAGGACACTCCAGGCACCTGCCTAGAGTAAGATGGCGCTTTTCGTAAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CCA 72 bp | AACCTGGAAACGATGAGGCTGCACGGCTCACCGTCTTaGATAATGGCAAAGATGGCCTGCAAGTGCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: NLETMRLHGSPS*IMAKMACKCVT Trigger: AGTCACGCACTTGCAGGCCATCTTTGCCATTATCCAAGACGGTGAGCCGTGCAGCCTCATCGTTTCCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CAA 72 bp | AAACCTGGAAACGATGAGGCTGCACGGCTCACCGTCTaGGATAATGGCAAAGATGGCCTGCAAGTGCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: KPGNDEAARLTV*DNGKDGLQVRD Trigger: GTCACGCACTTGCAGGCCATCTTTGCCATTATCCAAGACGGTGAGCCGTGCAGCCTCATCGTTTCCAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CAA 90 bp | GCCATATTGAAACCTGGAAACGATGAGGCTGCACGGCTCACCGTCTaGGATAATGGCAAAGATGGCCTGCAAGTGCGTGACTCTCGTTAT | + |
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Preference number: 6 (lower is better) Translates to: AILKPGNDEAARLTV*DNGKDGLQVRDSRY Trigger: ATAACGAGAGTCACGCACTTGCAGGCCATCTTTGCCATTATCCAAGACGGTGAGCCGTGCAGCCTCATCGTTTCCAGGTTTCAATATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS TCA 72 bp | GGTGCCTGGAGTGTCCTACGAGGACGAGGACCATATTaGATCGTGACGGATTTTCTTACAGGAGTCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: GAWSVLRGRGPY*IVTDFLTGVTS Trigger: GGAAGTGACTCCTGTAAGAAAATCCGTCACGATTCAATATGGTCCTCGTCCTCGTAGGACACTCCAGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS GCA 72 bp | CACGGCTCACCGTCTTGGATAATGGCAAAGATGGCCTaGAAGTGCGTGACTCTCGTTATGGAAATCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HGSPSWIMAKMA*KCVTLVMEISV Trigger: GACAGAGATTTCCATAACGAGAGTCACGCACTTGCAGGCCATCTTTGCCATTATCCAAGACGGTGAGCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS TCA 72 bp | AAAAGGAGAGATATGCTTGCTCTTGAGGTAGGAAGCTaGCAGTGTGCACAGTGCTGTCAACCACAGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: KRRDMLALEVGS*QCAQCCQPQLH Trigger: GTGCAGCTGTGGTTGACAGCACTGTGCACACTGTCAGCTTCCTACCTCAAGAGCAAGCATATCTCTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000537796.2 ENST00000542095.6 ENST00000544891.6 ENST00000545807.6 ENST00000640099.1 ENST00000640481.1 ENST00000640648.1 |
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| CDS GCA 72 bp | GTGACTCTCGTTATGGAAATCTCTGTCCTGGAGAGGTaGTTACGAAAAGCGCCATCTTACTCTAGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VTLVMEISVLER*LRKAPSYSRQV Trigger: CACCTGCCTAGAGTAAGATGGCGCTTTTCGTAAGCACCTCTCCAGGACAGAGATTTCCATAACGAGAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS GCA 72 bp | TCACCGTCTTGGATAATGGCAAAGATGGCCTGCAAGTaGGTGACTCTCGTTATGGAAATCTCTGTCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPSWIMAKMACK*VTLVMEISVLE Trigger: CTCCAGGACAGAGATTTCCATAACGAGAGTCACGCACTTGCAGGCCATCTTTGCCATTATCCAAGACGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CCA 72 bp | TTTTCTTACAGGAGTCACTTCCTAACTGTAGTCTCCTaGCAGAAAAGAGGCAACCTCCAGCCGGTAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FSYRSHFLTVVS*QKRGNLQPVVP Trigger: TGGGACTACCGGCTGGAGGTTGCCTCTTTTCTGCCAGGAGACTACAGTTAGGAAGTGACTCCTGTAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639955.1 |
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| CDS CAA 72 bp | AGGTGCCTGGAGTGTCCTACGAGGACGAGGACCATATaGAATCGTGACGGATTTTCTTACAGGAGTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: RCLECPTRTRTI*NRDGFSYRSHF Trigger: GAAGTGACTCCTGTAAGAAAATCCGTCACGATTCAATATGGTCCTCGTCCTCGTAGGACACTCCAGGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CAA 90 bp | ACTCTAGGCAGGTGCCTGGAGTGTCCTACGAGGACGAGGACCATATaGAATCGTGACGGATTTTCTTACAGGAGTCACTTCCTAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: TLGRCLECPTRTRTI*NRDGFSYRSHFLTV Trigger: TACAGTTAGGAAGTGACTCCTGTAAGAAAATCCGTCACGATTCAATATGGTCCTCGTCCTCGTAGGACACTCCAGGCACCTGCCTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CCA 72 bp | AGAGTGGCAAGCAACACGATTACCCATAAATGTGCATaGGGAACTGGAAAGGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RVASNTITHKCA*GTGKVCVCVCV Trigger: CACACACACACACACACACACCTTTCCAGTTCCCCATGCACATTTATGGGTAATCGTGTTGCTTGCCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540083.1 |
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| CDS CCA 72 bp | CCGTCTTCTAAAAATACAAAAATTAGCTGGTTATGGTaGCGTGCGCCTGAAATCCCTTGGGAGGCTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSSKNTKISWLW*RAPEIPWEAEA Trigger: TGCCTCAGCCTCCCAAGGGATTTCAGGCGCACGCCACCATAACCAGCTAATTTTTGTATTTTTAGAAGACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000640072.1 |
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| CDS CAA 90 bp | TCCACTGGGGACTCTCTGAGAAATCTCACGGAATACGTATTAGAATaGCCCCTTCCAGAAGGATGGTATTTAGCCACCAATTCCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: STGDSLRNLTEYVLE*PLPEGWYLATNSHS Trigger: GGAATGGGAATTGGTGGCTAAATACCATCCTTCTGGAAGGGGCAATTCTAATACGTATTCCGTGAGATTTCTCAGAGAGTCCCCAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000537796.2 ENST00000542095.6 ENST00000544891.6 ENST00000545807.6 ENST00000640099.1 ENST00000640481.1 ENST00000640648.1 |
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| CDS TCA 72 bp | CCTACTGTGAACTGCACATGTGAGGGATCTAGGTTATaGGCTCCCTATGAGAATCTGATGCCTGATGATCTG | + |
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Preference number: 6 (lower is better) Translates to: PTVNCTCEGSRL*APYENLMPDDL Trigger: CAGATCATCAGGCATCAGATTCTCATAGGGAGCTCATAACCTAGATCCCTCACATGTGCAGTTCACAGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS TCA 72 bp | GGAGTGTCCTACGAGGACGAGGACCATATTGAATCGTaGCGGATTTTCTTACAGGAGTCACTTCCTAACTGT | + |
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Preference number: 6 (lower is better) Translates to: GVSYEDEDHIES*RIFLQESLPNC Trigger: ACAGTTAGGAAGTGACTCCTGTAAGAAAATCCGTCACGATTCAATATGGTCCTCGTCCTCGTAGGACACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639955.1 ENST00000640648.1 |
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| CDS CCA 72 bp | ACGGAATACGTATTAGAATTGCCCCTTCCAGAAGGATaGTATTTAGCCACCAATTCCCATTCCCCACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: TEYVLELPLPEG*YLATNSHSPQL Trigger: CAACTGTGGGGAATGGGAATTGGTGGCTAAATACCATCCTTCTGGAAGGGGCAATTCTAATACGTATTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000537796.2 ENST00000542095.6 ENST00000544891.6 ENST00000545807.6 ENST00000640099.1 ENST00000640481.1 ENST00000640648.1 |
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| CDS CCA 72 bp | CTACATAGAGCCCATGGGCTTTATCCTGCCATAGCCTaGTTTTGTAGAAGAAGTTTCATGGAACATAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LHRAHGLYPAIA*FCRRSFMEHSG Trigger: ACCACTATGTTCCATGAAACTTCTTCTACAAAACCAGGCTATGGCAGGATAAAGCCCATGGGCTCTATGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000544891.6 ENST00000638883.1 ENST00000640648.1 |
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| CDS CCA 72 bp | AAGCCAAGAAAGAAAACAACTGGGGTTCAATTCCACTaGGGACTCTCTGAGAAATCTCACGGAATACGTATT | + |
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Preference number: 6 (lower is better) Translates to: KPRKKTTGVQFH*GLSEKSHGIRI Trigger: AATACGTATTCCGTGAGATTTCTCAGAGAGTCCCCAGTGGAATTGAACCCCAGTTGTTTTCTTTCTTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000537796.2 ENST00000542095.6 ENST00000544891.6 ENST00000545807.6 ENST00000640099.1 ENST00000640481.1 ENST00000640648.1 |
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| CDS CAA 72 bp | GACTCTCTGAGAAATCTCACGGAATACGTATTAGAATaGCCCCTTCCAGAAGGATGGTATTTAGCCACCAAT | + |
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Preference number: 6 (lower is better) Translates to: DSLRNLTEYVLE*PLPEGWYLATN Trigger: ATTGGTGGCTAAATACCATCCTTCTGGAAGGGGCAATTCTAATACGTATTCCGTGAGATTTCTCAGAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000537796.2 ENST00000542095.6 ENST00000544891.6 ENST00000545807.6 ENST00000640099.1 ENST00000640481.1 ENST00000640648.1 |
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| CDS TCA 72 bp | CTGGTAAAATGGAATATGCTCATACCTCATTACCCCTaGATTCCCTACTTAGGTAGAGCAACTCCTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: LVKWNMLIPHYP*IPYLGRATPAN Trigger: ATTTGCAGGAGTTGCTCTACCTAAGTAGGGAATTCAGGGGTAATGAGGTATGAGCATATTCCATTTTACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639955.1 |
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| CDS TCA 72 bp | GAAATAGCTGATTTCCAGAGTGATGAGCTTATTCATTaGAGAGCCTTAGAGGACATTTCTTACACCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: EIADFQSDELIH*RALEDISYTPD Trigger: ATCTGGGGTGTAAGAAATGTCCTCTAAGGCTCTTCAATGAATAAGCTCATCACTCTGGAAATCAGCTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639955.1 |
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| CDS TCA 72 bp | CATGTCCTTAATTTACTAACGCCCACCCACAATCTTTaGCTGTATTTCTATTTCCCTATCCTGGATTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: HVLNLLTPTHNL*LYFYFPILDCL Trigger: TAGGCAATCCAGGATAGGGAAATAGAAATACAGTCAAAGATTGTGGGTGGGCGTTAGTAAATTAAGGACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640072.1 |
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| CDS TCA 72 bp | ATTTCAATTGACTGTACATATCTCCTACACCCTGATTaGGAGTATGCTAGTTTCACTATGCCCATTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ISIDCTYLLHPD*EYASFTMPITW Trigger: CCAGGTAATGGGCATAGTGAAACTAGCATACTCTCAATCAGGGTGTAGGAGATATGTACAGTCAATTGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638334.1 |
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| CDS GCA 72 bp | CAGTACTTATTAGGACAGATGCATCACTGTTCCAGATaGTTAGGATACAACAGCAACCAAAACAAAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: QYLLGQMHHCSR*LGYNSNQNKDS Trigger: GGAATCTTTGTTTTGGTTGCTGTTGTATCCTAAGCATCTGGAACAGTGATGCATCTGTCCTAATAAGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640072.1 |
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| CDS TCA 72 bp | TACAGTCCAAAGCAAGTAAAAGACAATGCTACTACTTaGGGACTTTGGAGTCCAATAAGCATCATTAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: YSPKQVKDNATT*GLWSPISIIKK Trigger: CTTTTTAATGATGCTTATTGGACTCCAAAGTCCTCAAGTAGTAGCATTGTCTTTTACTTGCTTTGGACTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640072.1 |
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