RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NECAB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000103154

Ensembl transcript IDs: ENST00000305202.9, ENST00000564166.1, ENST00000565691.5, ENST00000566836.1, ENST00000567703.1, ENST00000681513.1

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGAGGCAGGGGTGCTGGCTCCAGGAAGCCGCCCCCTTCAACCTTaGGCTTCACCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCT +
Preference number: 1 (lower is better)
Translates to: QEAGVLAPGSRPLQP*ASPGPGSTDTALPS
Trigger: AGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCAGCACCCCTGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR TCA 90 bp GGGCACAGTGGTGGCTACCTGGCTAGGTTGGGCACTACAGGGGCATaGCTCCTACTAGGTAGAAGAATGTCACCGAAGAGGGCAGGGTGT +
Preference number: 1 (lower is better)
Translates to: GHSGGYLARLGTTGA*LLLGRRMSPKRAGC
Trigger: ACACCCTGCCCTCTTCGGTGACATTCTTCTACCTAGTAGGAGTCATGCCCCTGTAGTGCCCAACCTAGCCAGGTAGCCACCACTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATaGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCTAGAAAAA +
Preference number: 1 (lower is better)
Translates to: RPPSLNNRETPSCGG*IEKKLLHQSVCLEK
Trigger: TTTTTCTAGACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR CCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGACAAGAAGAAGGGGCTaGTGGGCTCCTCCACGGGCC +
Preference number: 2 (lower is better)
Translates to: PGPGSTDTALPSQVGAGATRRRG*WAPPRA
Trigger: GGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCTTGT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR CAA 90 bp CCAGGAGGCAGGGGTGCTGGCTCCAGGAAGCCGCCCCCTTCAACCTaGGGCTTCACCAGGACCTGGCAGCACAGACACTGCTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: PGGRGAGSRKPPPST*GFTRTWQHRHCSAF
Trigger: GAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCAGCACCCCTGCCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR CCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGAGAAGAAGGGGCTGGTaGGCTCCTCCACGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRRRRGW*APPRAS
Trigger: AGAGGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCT...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR CCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGACAAGAAGAAGGGGCTaGTGGGCTCCTCCACGGGCC +
Preference number: 2 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRTRRRG*WAPPRA
Trigger: GGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCTTGT...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAAGAAGAAGGGGCTGGTaGGCTCCTCCACGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: APGSRPLQPWASPGPGSTRRRGW*APPRAS
Trigger: AGAGGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCT...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR TCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACTTGTGGAGGATGGATTaGAAAGAAGCTTCTGCACCA +
Preference number: 2 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHLWRMD*KEASAP
Trigger: TGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAA...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR CCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGCCTTCTTGTGGAGGATaGATTGAAAAGAAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRPSCGG*IEKKLL
Trigger: CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGG...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR CCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAACAAGAAGAAGGGGCTaGTGGGCTCCTCCACGGGCC +
Preference number: 2 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKTRRRG*WAPPRA
Trigger: GGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCTTGT...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR-3UTR CAA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACACTTGTGGAGGATGGATaGAAAAGAAGCTTCTGCACC +
Preference number: 3 (lower is better)
Translates to: APGSRPLQPWASPGPGSTLVEDG*KRSFCT
Trigger: GGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAG...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR TCA 72 bp GGTGGCTACCTGGCTAGGTTGGGCACTACAGGGGCATaGCTCCTACTAGGTAGAAGAATGTCACCGAAGAGG +
Preference number: 3 (lower is better)
Translates to: GGYLARLGTTGA*LLLGRRMSPKR
Trigger: CCTCTTCGGTGACATTCTTCTACCTAGTAGGAGTCATGCCCCTGTAGTGCCCAACCTAGCCAGGTAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
3UTR CCA 72 bp TCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATaGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: SLNNRETPSCGG*IEKKLLHQSVC
Trigger: ACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCGGGCAGAGGCGGGAGTaGGGCTTCCACACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGGQRRE*GFHTRS
Trigger: AGACCTGGTGTGGAAGCCCCACTCCCGCCTCTGCCC...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACCTCTGCCTTCTCAGGTaGGGGCAGGGGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHLCLLR*GQGRPP
Trigger: AGGAGGCCGCCCCTGCCCCCACCTGAGAAGGCAGAG...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGAGTCCCGTCCCACCGTaGACCAAGCAGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGASPVPP*TKQLAP
Trigger: TGGTGCCAGCTGCTTGGTGCACGGTGGGACGGGACT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGGGGCAGAGGCGGGAGTaGGGCTTCCACACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRGQRRE*GFHTRS
Trigger: AGACCTGGTGTGGAAGCCCCACTCCCGCCTCTGCCC...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCAGAAGAAGGGGCTGGTaGGCTCCTCCACGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGRRRGW*APPRAS
Trigger: AGAGGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCT...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGAGAAGAAGGGGCTGGTaGGCTCCTCCACGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGARRRGW*APPRAS
Trigger: AGAGGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCCGCCCCCTTCAACCTTaGGCTTCACCAGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGRPLQP*ASPGPG
Trigger: GCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCG...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGGCTCTGCCAAGCGGCTaGTCTGGGCTTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRALPSG*SGLPDP
Trigger: AGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGC...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGTTTGCAAGGCCTGGTaGCAATGCCAGCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGAVCKAW*QCQPRA
Trigger: TGCCCGTGGCTGGCATTGTCACCAGGCCTTGCAAAC...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCCCTCCCAATCAGCTCTaGCAAGCGGCTGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGPPNQL*QAADLG
Trigger: GCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGG...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGTCCTGCCGGACCAGCTaGAGGTGCATGTTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGASCRTS*RCMLVP
Trigger: TGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGA...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGAGTTCCTCACGCCAGTaGTCCCCCGCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGASSSRQ*SPADTG
Trigger: GCCAGTATCTGCGGGGGACCACTGGCGTGAGGAACT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCGAGAGGGCCTCAGGCTaGCTCAGTGTGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGERASG*LSVSTL
Trigger: CAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTC...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGCTGGCACCAAGATCCTaGAGAGGGCCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRLAPRS*RGPQAG
Trigger: GCCAGCCTGAGGCCCTCTCCAGGATCTTGGTGCCAG...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACATCCTCCACGGGCCTCTaGGAGGCTGTCAGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTSSTGL*EAVSPV
Trigger: GACGGGACTGACAGCCTCCCAGAGGCCCGTGGAGGA...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACACAAGAAGAAGGGGCTaGTGGGCTCCTCCACGGGCC +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHTRRRG*WAPPRA
Trigger: GGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCTTGT...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGGGCTCTGCAGGTGCTaGAAGCAGTTCCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGAGLCRC*KQFLTP
Trigger: TGGCGTGAGGAACTGCTTCCAGCACCTGCAGAGCCC...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564166.1
CDS-3UTR TCA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCTCAGTGTGTCCACCTTaGCGTGCCGGAACGCCTTAC +
Preference number: 4 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGSVCPP*RAGTPY
Trigger: GTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGA...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACTCCTGCCGGACCAGCTaGAGGTGCATGTTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHSCRTS*RCMLVP
Trigger: TGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGA...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGTTACACAGGGGGCTCTaGAGGTGCCTCTTCCACGCC +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRLHRGL*RCLFHA
Trigger: GGCGTGGAAGAGGCACCTGCAGAGCCCCCTGTGTAA...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGTGTCCACCTTGACGTaGCGGAACGCCTTACACAGG +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGAVSTLT*RNALHR
Trigger: CCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACAC...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAAGTCCCGTCCCACCGTaGACCAAGCAGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAASPVPP*TKQLAP
Trigger: TGGTGCCAGCTGCTTGGTGCACGGTGGGACGGGACT...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAGCCCACGGCCATCCCTaGAGGTGTAGGTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAAHGHP*RCRSTV
Trigger: GACTGTGGACCTACACCTGCAGGGATGGCCGTGGGC...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGAAGCGGGTCACAAACTaGTCCACGTTGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGAKRVTN*STLLPP
Trigger: GGGTGGGAGCAACGTGGACCAGTTTGTGACCCGCTT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACGCCAAGCGGCTGATCTaGGCTTCCAGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHAKRLI*ASRPSS
Trigger: GGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGC...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACTGGCACCAAGATCCTaGAGAGGGCCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAALAPRS*RGPQAG
Trigger: GCCAGCCTGAGGCCCTCTCCAGGATCTTGGTGCCAG...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGTGCATTAGGCAGGGATaGGTGGAGGGCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGACIRQG*VEGSSK
Trigger: CTTGGAGCTGCCCTCCACCCATCCCTGCCTAATGCA...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACACTCCCCTCACCCACGTaGAAGCGGCTGCCAGTACCA +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTLPSPT*KRLPVP
Trigger: TGGTACTGGCAGCCGCTTCCACGTGGGTGAGGGGAG...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR TCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGCGCTGTGGCTGGGTTTaGTGTGGTTCTGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRRCGWV*CGSVGA
Trigger: AGCTCCGACAGAACCACATCAAACCCAGCCACAGCG...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAGCTCCAAGGCTGGCCTaGACCTACAAGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAAPRLA*TYKTRC
Trigger: GCACCTGGTCTTGTAGGTTCAGGCCAGCCTTGGAGC...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGTCTGACAGGCGCTGCTaGAGGTCGAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRSDRRC*RSNHSA
Trigger: AGCACTGTGGTTCGACCTGCAGCAGCGCCTGTCAGA...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCTCATCTGACAGGCGCTaGTGCAGGTCGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGSSDRR*CRSNHS
Trigger: ACTGTGGTTCGACCTGCAGCAGCGCCTGTCAGATGA...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGAGACGAAGTTCCGGCTaGATTAGGCAGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGARRSSG*IRQGWV
Trigger: CACCCATCCCTGCCTAATGCAGCCGGAACTTCGTCT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACGTCTGTGCCGCGCTGTaGCTGGGTTTGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHVCAAL*LGLMWF
Trigger: GAACCACATCAAACCCAGCCACAGCGCGGCACAGAC...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGATAGCCATGAGCTTGTaGTTGGGGGCAGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRIAMSL*LGAEAG
Trigger: TCCCGCCTCTGCCCCCAACCACAAGCTCATGGCTAT...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAGCCAAGCGGCTGATCTaGGCTTCCAGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAAKRLI*ASRPSS
Trigger: GGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGC...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACGGCTTCACCAGGACCTaGCAGCACAGACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHGFTRT*QHRHCS
Trigger: AGAGCAGTGTCTGTGCTGCCAGGTCCTGGTGAAGCC...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAAGCAGCGACTGGATCTaGTTGGCCGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAASSDWI*LAVSFR
Trigger: CCTGAAGGAGACGGCCAATCAGATCCAGTCGCTGCT...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACACGCTGTGGCTGGGTTTaGTGTGGTTCTGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTRCGWV*CGSVGA
Trigger: AGCTCCGACAGAACCACATCAAACCCAGCCACAGCG...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGAAAGGTGAAGCCATCTaGGAGCCTCACGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGAKGEAI*EPHGSD
Trigger: ATCACTGCCGTGAGGCTCTCAGATGGCTTCACCTTT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACATCAGTGTGTCCACCTTaGCGTGCCGGAACGCCTTAC +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTSVCPP*RAGTPY
Trigger: GTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGA...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCATCAGTGTGTCCACCTTaGCGTGCCGGAACGCCTTAC +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAASVCPP*RAGTPY
Trigger: GTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGA...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAAGAAACTCGCTCAGTTaGTCGGGGCACACGGCCATC +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTRNSLS*SGHTAI
Trigger: GATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCT...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAGTGTCCACCTTGACGTaGCGGAACGCCTTACACAGG +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTVSTLT*RNALHR
Trigger: CCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACAC...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACATGGCAGCACAGACACTaGTCTGCCTTCTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTWQHRH*SAFSGG
Trigger: CCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCA...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCATGGTCTGTTCCTCGATaGCCTCCACCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAWSVPR*PPPHSP
Trigger: TGGAGAGTGCGGTGGAGGCCATCGAGGAACAGACCA...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACTGGTTCTGTCGGAGCTaGCTGGTCTGTTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHWFCRS*LVCSSM
Trigger: CATCGAGGAACAGACCAGCCAGCTCCGACAGAACCA...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACACGTGCACCAAGCAGCTaGCACCAAGATCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTRAPSS*HQDPGE
Trigger: CTCTCCAGGATCTTGGTGCCAGCTGCTTGGTGCACG...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAGGCTTCACCAGGACCTaGCAGCACAGACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTGFTRT*QHRHCS
Trigger: AGAGCAGTGTCTGTGCTGCCAGGTCCTGGTGAAGCC...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAGCTACCTGGCTAGGTTaGGCACTACAGGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAATWLG*ALQGHD
Trigger: GTCATGCCCCTGTAGTGCCCAACCTAGCCAGGTAGC...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAGCTACCTGGCTAGGTTaGGCACTACAGGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTATWLG*ALQGHD
Trigger: GTCATGCCCCTGTAGTGCCCAACCTAGCCAGGTAGC...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGGGTTTATTTGGCGCCTaGGCACAGTGGTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRGLFGA*AQWWLP
Trigger: AGGTAGCCACCACTGTGCCCAGGCGCCAAATAAACC...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAAGAGCCTCACGGCAGTaGTGTGGAAGCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTRASRQ*CGSSSS
Trigger: TGAGGAACTGCTTCCACATCACTGCCGTGAGGCTCT...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACACAGACCCTCTTCCTTTaGATCCTCCGTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTQTLFL*ILRGRW
Trigger: CCATCTGCCACGGAGGATGCAAAGGAAGAGGGTCTG...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAGACCCTCTTCCTTTaGATCCTCCGTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAQTLFL*ILRGRW
Trigger: CCATCTGCCACGGAGGATGCAAAGGAAGAGGGTCTG...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAGGCACTACAGGGGCATaGCTCCTACTAGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTGTTGA*LLLGRR
Trigger: TCTTCTACCTAGTAGGAGTCATGCCCCTGTAGTGCC...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACTTTCCAGTGACATCTaGATCCGTGGGACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAALSSDI*IRGTEL
Trigger: CAGCTCTGTCCCACGGATTCAGATGTCACTGGAAAG...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACGAACCACAGTGCTTTaGTCTCCAGCCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAARTTVL*SPASQS
Trigger: TGATTGGGAGGCTGGAGAGCAAAGCACTGTGGTTCG...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAGCAGGTGCATGTTGGTaGCATCTTCATCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTAGACW*HLHLTG
Trigger: GCCTGTCAGATGAAGATGGCACCAACATGCACCTGC...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGAATCACACAGCTCCTTaGTGTCCACATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGPGSTDTALPSQVGAGANHTAP*CPHGWC
Trigger: ACACCAACCATGTGGACACCAAGGAGCTGTGTGATT...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAATCCTCCGTGGCAGATaGAAGGGTCTTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTILRGR*KGLALF
Trigger: GAACAAGGCAAGACCCTTCCATCTGCCACGGAGGAT...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACGCTGCAGGTGCATGTTaGTGCCATCTTCATCTGACA +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHAAGAC*CHLHLT
Trigger: TGTCAGATGAAGATGGCACCAACATGCACCTGCAGC...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACATGTTTCCAGGGAGGTTaGGCAAAGTCCGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTCFQGG*AKSDRG
Trigger: ACCTCTGTCGGACTTTGCCCAACCTCCCTGGAAACA...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGAGTCCCGTCCCACCGTaGACCAAGCAGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWSPVPP*TKQLAP
Trigger: TGGTGCCAGCTGCTTGGTGCACGGTGGGACGGGACT...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGCACAACCTTTACCACTaGAGTCCTTCCAAAACCCCT +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRHNLYH*SPSKTP
Trigger: AGGGGTTTTGGAAGGACTGCAGTGGTAAAGGTTGTG...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAGGGGCTCGCCCATCCTaGCGCCCACCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEGARPS*RPPSAA
Trigger: TGCTGCGCTGGGTGGGCGCCAGGATGGGCGAGCCCC...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR CCA 90 bp GGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACTGGTGTCCACATGGTTaGTGTTGTCAGAGTCAATCG +
Preference number: 4 (lower is better)
Translates to: GSRKPPPSTLGFTRTWQHWCPHG*CCQSQS
Trigger: CGATTGACTCTGACAACACCAACCATGTGGACACCA...GTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR CCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGCGCCCCCTTCAACCTTaGGCTTCACCAGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWRPLQP*ASPGPG
Trigger: GCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCG...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCATCCTTCCAAAACCCCTaGTGTGTTTCCAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAASFQNP*CVSREV
Trigger: AACCTCCCTGGAAACACACCAGGGGTTTTGGAAGGA...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR TCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGCACCGCACTCTCCACTaGGCTCAGCAGCGACTGGAT +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWHRTLH*AQQRLD
Trigger: ATCCAGTCGCTGCTGAGCTCAGTGGAGAGTGCGGTG...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACATCTGCAAAGAAGAGCTaGAATTCCTCCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTSAKKS*NSSKDS
Trigger: GCTGTCCTTGGAGGAATTCCAGCTCTTCTTTGCAGA...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTCCTCCACGGGCCTCTaGGAGGCTGTCAGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWISSTGL*EAVSPV
Trigger: GACGGGACTGACAGCCTCCCAGAGGCCCGTGGAGGA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGAGCAGCGACTGGATCTaGTTGGCCGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWSSDWI*LAVSFR
Trigger: CCTGAAGGAGACGGCCAATCAGATCCAGTCGCTGCT...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGCTCTGCCAAGCGGCTaGTCTGGGCTTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIALPSG*SGLPDP
Trigger: AGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGC...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACATTGTGGAGGATGGATTaGAAAGAAGCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: APGSRPLQPWASPGPGSTLWRMD*KEASAP
Trigger: TGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAA...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGATTAAGGACGCCATCTaGAAAGAAGAGCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRIKDAI*KEELEF
Trigger: GAATTCCAGCTCTTCTTTGCAGATGGCGTCCTTAAT...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAACTCTGCCTTCTCAGGTaGGGGCAGGGGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIELCLLR*GQGRPP
Trigger: AGGAGGCCGCCCCTGCCCCCACCTGAGAAGGCAGAG...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTCGCCCCCTTCAACCTTaGGCTTCACCAGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIRPLQP*ASPGPG
Trigger: GCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCG...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGTCCCGGAGCAGCCTGTaGGCGCCGGCCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLSRSSL*APALHR
Trigger: CCTGTGCAGGGCCGGCGCGCACAGGCTGCTCCGGGA...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR GCA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAATTAAGGACGCCATCTaGAAAGAAGAGCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAIKDAI*KEELEF
Trigger: GAATTCCAGCTCTTCTTTGCAGATGGCGTCCTTAAT...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTTACACAGGGGGCTCTaGAGGTGCCTCTTCCACGCC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWILHRGL*RCLFHA
Trigger: GGCGTGGAAGAGGCACCTGCAGAGCCCCCTGTGTAA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGAGCCACGGGCAGGACTaGGTTAATTTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWSHGQD*VNFGVQ
Trigger: CTGCACCCCAAAATTAACGCAGTCCTGCCCGTGGCT...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGCGCCAAACGCTCAGCTaGACACAACCACACTCCGAA +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWRQTLS*TQPHSE
Trigger: TTCGGAGTGTGGTTGTGTGCAGCTGAGCGTTTGGCG...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGTGGCTGGGTTTGATGTaGTTCTGTCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWWLGLM*FCRSWL
Trigger: CAGCCAGCTCCGACAGAACCACATCAAACCCAGCCA...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTAGTTCCTCACGCCAGTaGTCCCCCGCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWISSSRQ*SPADTG
Trigger: GCCAGTATCTGCGGGGGACCACTGGCGTGAGGAACT...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGCTCACGGCAGTGATGTaGAAGCAGTTCCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWLTAVM*KQFLTP
Trigger: TGGCGTGAGGAACTGCTTCCACATCACTGCCGTGAG...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCCTCTGCCTTCTCAGGTaGGGGCAGGGGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVLCLLR*GQGRPP
Trigger: AGGAGGCCGCCCCTGCCCCCACCTGAGAAGGCAGAG...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGCGAACCACAGTGCTTTaGTCTCCAGCCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWRTTVL*SPASQS
Trigger: TGATTGGGAGGCTGGAGAGCAAAGCACTGTGGTTCG...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTGGCAGCACAGACACTaGTCTGCCTTCTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIWQHRH*SAFSGG
Trigger: CCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTCTGTCGGAGCTGGCTaGTCTGTTCCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWISVGAG*SVPRWP
Trigger: AGGCCATCGAGGAACAGACCAGCCAGCTCCGACAGA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATCCTCCGTGGCAGATaGAAGGGTCTTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWILRGR*KGLALF
Trigger: GAACAAGGCAAGACCCTTCCATCTGCCACGGAGGAT...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTCGTGCACCAAGCAGCTaGCACCAAGATCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIRAPSS*HQDPGE
Trigger: CTCTCCAGGATCTTGGTGCCAGCTGCTTGGTGCACG...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCTCCTCCACGGGCCTCTaGGAGGCTGTCAGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVSSTGL*EAVSPV
Trigger: GACGGGACTGACAGCCTCCCAGAGGCCCGTGGAGGA...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGGAAAATGTCCAGGATaGCGGCGGTGCCCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLGKCPG*RRCPRA
Trigger: CGCGCGGGGGCACCGCCGTCATCCTGGACATTTTCC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR GCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGCAAACTGGTCCACGTTaGTCCCACCCTCATATACCT +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWQTGPR*SHPHIP
Trigger: AGGTATATGAGGGTGGGAGCAACGTGGACCAGTTTG...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAATCCACACCAGGTCTGTaGCGCGCTGTGGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIESTPGL*RAVAGF
Trigger: AAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGA...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTGGTTCTGTCGGAGCTaGCTGGTCTGTTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIWFCRS*LVCSSM
Trigger: CATCGAGGAACAGACCAGCCAGCTCCGACAGAACCA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAGAGAGGGCCTCAGGCTaGCTCAGTGTGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEERASG*LSVSTL
Trigger: CAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTC...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCACAAGAAGAAGGGGCTaGTGGGCTCCTCCACGGGCC +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVTRRRG*WAPPRA
Trigger: GGCCCGTGGAGGAGCCCACCAGCCCCTTCTTCTTGT...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGGTTTATTTGGCGCCTaGGCACAGTGGTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIGLFGA*AQWWLP
Trigger: AGGTAGCCACCACTGTGCCCAGGCGCCAAATAAACC...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTAGTCATCAGTCCACGTaGCTTCACCCACCGCCAAAC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWISHQST*LHPPPN
Trigger: GTTTGGCGGTGGGTGAAGCCACGTGGACTGATGACT...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR TCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTAAAGGTGAAGCCATCTaGGAGCCTCACGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIKGEAI*EPHGSD
Trigger: ATCACTGCCGTGAGGCTCTCAGATGGCTTCACCTTT...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGTTCTGCCTTTCCAGTaGCATCTGAATCCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIVLPFQ*HLNPWD
Trigger: GTCCCACGGATTCAGATGTCACTGGAAAGGCAGAAC...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR TCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGTGCTCCCAGCCACGCTaGCACACACACGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLCSQPR*HTHAGP
Trigger: TGGGCCTGCGTGTGTGTGTCAGCGTGGCTGGGAGCA...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGCAGGTGCATGTTGGTaGCATCTTCATCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIAGACW*HLHLTG
Trigger: GCCTGTCAGATGAAGATGGCACCAACATGCACCTGC...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAGAAACTCGCTCAGTTaGTCGGGGCACACGGCCATC +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIERNSLS*SGHTAI
Trigger: GATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCT...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAATGGCAGCACAGACACTaGTCTGCCTTCTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEWQHRH*SAFSGG
Trigger: CCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCA...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAGTCTGTGCCGCGCTGTaGCTGGGTTTGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEVCAAL*LGLMWF
Trigger: GAACCACATCAAACCCAGCCACAGCGCGGCACAGAC...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAATAGCCATGAGCTTGTaGTTGGGGGCAGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEIAMSL*LGAEAG
Trigger: TCCCGCCTCTGCCCCCAACCACAAGCTCATGGCTAT...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAGTCCCCCGCAGATACTaGCGCAGAGAGTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEVPRRY*RRESRN
Trigger: GTTTCTGGACTCTCTGCGCCAGTATCTGCGGGGGAC...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCAGTTCCTCACGCCAGTaGTCCCCCGCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVSSSRQ*SPADTG
Trigger: GCCAGTATCTGCGGGGGACCACTGGCGTGAGGAACT...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAACTGGCACCAAGATCCTaGAGAGGGCCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKLAPRS*RGPQAG
Trigger: GCCAGCCTGAGGCCCTCTCCAGGATCTTGGTGCCAG...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGTCAGAGTCAATCGTGTaGAAGAGATCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWSESIV*KRSSSS
Trigger: AGAACTGGAGGATCTCTTTCACACGATTGACTCTGA...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAACACCGCACTCTCCACTaGGCTCAGCAGCGACTGGAT +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKHRTLH*AQQRLD
Trigger: ATCCAGTCGCTGCTGAGCTCAGTGGAGAGTGCGGTG...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAACCTCCCAATCAGCTCTaGCAAGCGGCTGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKPPNQL*QAADLG
Trigger: GCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGG...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAATCATCTGACAGGCGCTaGTGCAGGTCGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIESSDRR*CRSNHS
Trigger: ACTGTGGTTCGACCTGCAGCAGCGCCTGTCAGATGA...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAATGGCTGGGTTTGATGTaGTTCTGTCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEWLGLM*FCRSWL
Trigger: CAGCCAGCTCCGACAGAACCACATCAAACCCAGCCA...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGCTGCAGGTGCATGTTaGTGCCATCTTCATCTGACA +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIAAGAC*CHLHLT
Trigger: TGTCAGATGAAGATGGCACCAACATGCACCTGCAGC...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCGTCCCCCGCAGATACTaGCGCAGAGAGTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVVPRRY*RRESRN
Trigger: GTTTCTGGACTCTCTGCGCCAGTATCTGCGGGGGAC...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCGGGCAGCTCCAAGGCTaGCCTGAACCTACAAGACCA +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVGQLQG*PEPTRP
Trigger: TGGTCTTGTAGGTTCAGGCCAGCCTTGGAGCTGCCC...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAATTAGGCAGGGATGGGTaGAGGGCAGCTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKLGRDG*RAAPRL
Trigger: CAGCCTTGGAGCTGCCCTCCACCCATCCCTGCCTAA...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR TCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAGGCACTACAGGGGCATaGCTCCTACTAGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEGTTGA*LLLGRR
Trigger: TCTTCTACCTAGTAGGAGTCATGCCCCTGTAGTGCC...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGCTTCCTGCAGCCTCTaGCCGGATACTGGGATCCTT +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKASCSL*PDTGIL
Trigger: AAGGATCCCAGTATCCGGTCAGAGGCTGCAGGAAGC...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAATCTGACAGGCGCTGCTaGAGGTCGAACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKSDRRC*RSNHSA
Trigger: AGCACTGTGGTTCGACCTGCAGCAGCGCCTGTCAGA...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTCTGCAAAGAAGAGCTaGAATTCCTCCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWISAKKS*NSSKDS
Trigger: GCTGTCCTTGGAGGAATTCCAGCTCTTCTTTGCAGA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTCCTTGGTGTCCACATaGTTGGTGTTGTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWISLVST*LVLSES
Trigger: TGACTCTGACAACACCAACCATGTGGACACCAAGGA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR CCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAAAGCGGGTCACAAACTaGTCCACGTTGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKKRVTN*STLLPP
Trigger: GGGTGGGAGCAACGTGGACCAGTTTGTGACCCGCTT...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAATGGTCTGTTCCTCGATaGCCTCCACCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKWSVPR*PPPHSP
Trigger: TGGAGAGTGCGGTGGAGGCCATCGAGGAACAGACCA...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCCTCACGGCAGTGATGTaGAAGCAGTTCCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVLTAVM*KQFLTP
Trigger: TGGCGTGAGGAACTGCTTCCACATCACTGCCGTGAG...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGAGAGGGCCTCAGGCTaGCTCAGTGTGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLERASG*LSVSTL
Trigger: CAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGCTACCTGGCTAGGTTaGGCACTACAGGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKATWLG*ALQGHD
Trigger: GTCATGCCCCTGTAGTGCCCAACCTAGCCAGGTAGC...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAACAAACTGGTCCACGTTaGTCCCACCCTCATATACCT +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEQTGPR*SHPHIP
Trigger: AGGTATATGAGGGTGGGAGCAACGTGGACCAGTTTG...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR GCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGTGTCCACCTTGACGTaGCGGAACGCCTTACACAGG +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLVSTLT*RNALHR
Trigger: CCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACAC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAATTACACAGGGGGCTCTaGAGGTGCTGGAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKLHRGL*RCWKQF
Trigger: GAACTGCTTCCAGCACCTGCAGAGCCCCCTGTGTAA...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564166.1
CDS-3UTR GCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAACTGATGAGGGATGTTaGAGACAGAGGCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKTDEGC*RQRPSP
Trigger: AGGGGAGGGCCTCTGTCTGCAACATCCCTCATCAGT...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR GCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCGCACGGCGGAAAATCTaGAGAAAAGAGAGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVARRKI*RKERRS
Trigger: ACTCCGCCTCTCTTTTCTGCAGATTTTCCGCCGTGC...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGTCTGTCGGAGCTGGCTaGTCTGTTCCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLSVGAG*SVPRWP
Trigger: AGGCCATCGAGGAACAGACCAGCCAGCTCCGACAGA...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGTCCCCCGCAGATACTaGCGCAGAGAGTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLVPRRY*RRESRN
Trigger: GTTTCTGGACTCTCTGCGCCAGTATCTGCGGGGGAC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCGTGCACCAAGCAGCTaGCACCAAGATCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLRAPSS*HQDPGE
Trigger: CTCTCCAGGATCTTGGTGCCAGCTGCTTGGTGCACG...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGGCTTCACCAGGACCTaGCAGCACAGACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLGFTRT*QHRHCS
Trigger: AGAGCAGTGTCTGTGCTGCCAGGTCCTGGTGAAGCC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGGTTTATTTGGCGCCTaGGCACAGTGGTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKGLFGA*AQWWLP
Trigger: AGGTAGCCACCACTGTGCCCAGGCGCCAAATAAACC...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGGTCCACAAAGTAATTTaGTGTTGTCAGAGTCAATCG +
Preference number: 4 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWVHKVI*CCQSQS
Trigger: CGATTGACTCTGACAACACCAAATTACTTTGTGGAC...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR TCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGAGAGCCTCACGGCAGTaGTGTGGAAGCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLRASRQ*CGSSSS
Trigger: TGAGGAACTGCTTCCACATCACTGCCGTGAGGCTCT...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CCA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTCCTTCTTGTGGAGGATaGATTGAAAAGAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIPSCGG*IEKKLL
Trigger: CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGG...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAATTGTGGAGGATGGATTaGAAAGAAGCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIELWRMD*KEASAP
Trigger: TGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAA...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR TCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGGCACTACAGGGGCATaGCTCCTACTAGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLGTTGA*LLLGRR
Trigger: TCTTCTACCTAGTAGGAGTCATGCCCCTGTAGTGCC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR GCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGACCTACAAGACCAGGTaGCTCCTCGTTCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLTYKTR*LLVLPF
Trigger: GAAAGGCAGAACGAGGAGGCACCTGGTCTTGTAGGT...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCCTCTGACCGGATACTaGGATCCTTCTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLPLTGY*DPSLLP
Trigger: TGGGAGAAGAGAAGGATCCCAGTATCCGGTCAGAGG...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR TCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCTCAGAGTCAATCGTGTaGAAGAGATCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVSESIV*KRSSSS
Trigger: AGAACTGGAGGATCTCTTTCACACGATTGACTCTGA...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR TCA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCTTGTGGAGGATGGATTaGAAAGAAGCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVLWRMD*KEASAP
Trigger: TGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAA...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAACCTTCTTGTGGAGGATaGATTGAAAAGAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEPSCGG*IEKKLL
Trigger: CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGG...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CCA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCCTTCTTGTGGAGGATaGATTGAAAAGAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLPSCGG*IEKKLL
Trigger: CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGG...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CAA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGCCGCCCCCTTCAACCTaGGGCTTCACCAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: PGPGSTDTALPSQVGAGAPPPST*GFTRTW
Trigger: CCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGG...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CAA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGGCCATGAGCTTGTGGTaGGGGGCAGAGGCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRAMSLW*GAEAGV
Trigger: CACTCCCGCCTCTGCCCCCAACCACAAGCTCATGGC...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS GCA 90 bp GTGGTTGGGGGCAGAGGCGGGAGTGGGGCTTCCACACCAGGTCTGTaGCGCGCTGTGGCTGGGTTTGATGTGGTTCTGTCGGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VVGGRGGSGASTPGL*RAVAGFDVVLSELA
Trigger: AGCCAGCTCCGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAAGCCCCACTCCCGCCTCTGCCCCCAACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000681513.1
CDS GCA 90 bp GTCCCCCGCAGATACTGGCGCAGAGAGTCCAGAAACTCGCTCAGTTaGTCGGGGCACACGGCCATCTCCTGCCGGACCAGCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VPRRYWRRESRNSLS*SGHTAISCRTSCRC
Trigger: GCACCTGCAGCTGGTCCGGCAGGAGATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCTGGACTCTCTGCGCCAGTATCTGCGGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000567703.1
ENST00000681513.1
CDS-3UTR CAA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCCTCAGTGTGTCCACCTaGACGTGCCGGAACGCCTTA +
Preference number: 5 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGLSVST*TCRNAL
Trigger: TAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAG...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS TCA 90 bp CCAAGATCCTGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTTaGCGTGCCGGAACGCCTTACACAGGGGGCTCTGCAGGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: PRSWRGPQAGSVCPP*RAGTPYTGGSAGAS
Trigger: AGAGGCACCTGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGATCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000681513.1
CDS TCA 90 bp CCAAGATCCTGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTTaGCGTGCCGGAACGCCTTACACAGGGGGCTCTGCAGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: PRSWRGPQAGSVCPP*RAGTPYTGGSAGAG
Trigger: TCCAGCACCTGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGATCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564166.1
CDS GCA 90 bp ATCCTGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTTGACGTaGCGGAACGCCTTACACAGGGGGCTCTGCAGGTGCCTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ILERASGWLSVSTLT*RNALHRGLCRCLFH
Trigger: GTGGAAGAGGCACCTGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000681513.1
CDS GCA 90 bp ATCCTGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTTGACGTaGCGGAACGCCTTACACAGGGGGCTCTGCAGGTGCTGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ILERASGWLSVSTLT*RNALHRGLCRCWKQ
Trigger: CTGCTTCCAGCACCTGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564166.1
CDS GCA 90 bp GTGGTTGGGGGCAGAGGCGGGAGTGGGGCTTCCACACCAGGTCTGTaGCGCGCTGTGGCTGGGTTTGATGTGGTTCTGTCTTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: VVGGRGGSGASTPGL*RAVAGFDVVLSCTV
Trigger: CACAGTGCAAGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAAGCCCCACTCCCGCCTCTGCCCCCAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS-3UTR CAA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACAGAAACTCGCTCAGTaGCTCGGGGCACACGGCCAT +
Preference number: 5 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAQKLAQ*LGAHGH
Trigger: ATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCTG...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS CCA 90 bp GTGCACCAAGCAGCTGGCACCAAGATCCTGGAGAGGGCCTCAGGCTaGCTCAGTGTGTCCACCTTGACGTGCCGGAACGCCTTACACAGG +
Preference number: 5 (lower is better)
Translates to: VHQAAGTKILERASG*LSVSTLTCRNALHR
Trigger: CCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGATCTTGGTGCCAGCTGCTTGGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
ENST00000681513.1
CDS-3UTR CAA 90 bp CCAGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCAGATGGAAGGGTCTaGCCTTGTTCCATAGCCATG +
Preference number: 5 (lower is better)
Translates to: PGPGSTDTALPSQVGAGAADGRV*PCSIAM
Trigger: CATGGCTATGGAACAAGGCAAGACCCTTCCATCTGC...CGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACCAGACCCTCTTCCTTaGCATCCTCCGTGGCAGATG +
Preference number: 5 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAPDPLP*HPPWQM
Trigger: CATCTGCCACGGAGGATGCAAAGGAAGAGGGTCTGG...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp GCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCACACCAGACCCTCTTCCTTaGCATCCTCCGTGGCAGATG +
Preference number: 5 (lower is better)
Translates to: APGSRPLQPWASPGPGSTPDPLP*HPPWQM
Trigger: CATCTGCCACGGAGGATGCAAAGGAAGAGGGTCTGG...TGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS GCA 90 bp AGGACGCCAAGAGTTCAGAAAAGCAGCCGCAGACGAAGTTCCGGCTaGATTAGGCAGGGATGGGTGGAGGGCAGCTCCAAGGCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: RTPRVQKSSRRRSSG*IRQGWVEGSSKAGL
Trigger: CAGGCCAGCCTTGGAGCTGCCCTCCACCCATCCCTGCCTAATGCAGCCGGAACTTCGTCTGCGGCTGCTTTTCTGAACTCTTGGCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS CCA 90 bp GTGATGTGGAAGCAGTTCCTCACGCCAGTGGTCCCCCGCAGATACTaGCGCAGAGAGTCCAGAAACTCGCTCAGTTGCTCGGGGCACACG +
Preference number: 5 (lower is better)
Translates to: VMWKQFLTPVVPRRY*RRESRNSLSCSGHT
Trigger: CGTGTGCCCCGAGCAACTGAGCGAGTTTCTGGACTCTCTGCGCCAGTATCTGCGGGGGACCACTGGCGTGAGGAACTGCTTCCACATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000681513.1
CDS-3UTR CAA 90 bp GTGTGGGTCATGCGTGGCCATGTGAGGGGTAGGGGAGAGGCCAGGACCAGGAGGACAAACTGGTCCACGTaGCTCCCACCCTCATATACC +
Preference number: 5 (lower is better)
Translates to: VWVMRGHVRGRGEARTRRTNWST*LPPSYT
Trigger: GGTATATGAGGGTGGGAGCAACGTGGACCAGTTTGT...CCTCCTGGTCCTGGCCTCTCCCCTACCCCTCACATGGCCACGCATGACCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCATCGAACCACAGTGCTTaGCTCTCCAGCCTCCCAATC +
Preference number: 5 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAASNHSA*LSSLPI
Trigger: GATTGGGAGGCTGGAGAGCAAAGCACTGTGGTTCGA...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS TCA 90 bp GCAGGTGTTTGCTCTCCAGCCTCCCAATCAGCTCTGCCAAGCGGCTaGTCTGGGCTTCCAGACCCTCTTCCTTTGCATCCTCCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: AGVCSPASQSALPSG*SGLPDPLPLHPPWQ
Trigger: CTGCCACGGAGGATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGGCTGGAGAGCAAACACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566836.1
CDS GCA 90 bp CCGGACCAGCTGCAGGTGTTTGCTCTCCAGCCTCCCAATCAGCTCTaGCAAGCGGCTGATCTGGGCTTCCAGACCCTCTTCCTTTGCATC +
Preference number: 5 (lower is better)
Translates to: PDQLQVFALQPPNQL*QAADLGFQTLFLCI
Trigger: GATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGGCTGGAGAGCAAACACCTGCAGCTGGTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566836.1
CDS CCA 90 bp GTGGCAGATGGAAGGGTCTTGCCTTGTTCCATAGCCATGAGCTTGTaGTTGGGGGCAGAGGCGGGAGTGGGGCTTCCACACCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: VADGRVLPCSIAMSL*LGAEAGVGLPHQVC
Trigger: ACAGACCTGGTGTGGAAGCCCCACTCCCGCCTCTGCCCCCAACCACAAGCTCATGGCTATGGAACAAGGCAAGACCCTTCCATCTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS CCA 90 bp CAGAAAAGCAGCCGCAGACGAAGTTCCGGCTGCATTAGGCAGGGATaGGTGGAGGGCAGCTCCAAGGCTGGCCTGAACCTACAAGACCAG +
Preference number: 5 (lower is better)
Translates to: QKSSRRRSSGCIRQG*VEGSSKAGLNLQDQ
Trigger: CTGGTCTTGTAGGTTCAGGCCAGCCTTGGAGCTGCCCTCCACCCATCCCTGCCTAATGCAGCCGGAACTTCGTCTGCGGCTGCTTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CAA 90 bp AGGACCTGGCAGCACAGACACTGCTCTGCCTTCTCAGGTGGGGGCAGGGGCGGCCTTGTGGAGGATGGATaGAAAAGAAGCTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: RTWQHRHCSAFSGGGRGGLVEDG*KRSFCT
Trigger: GGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAG...GCCGCCCCTGCCCCCACCTGAGAAGGCAGAGCAGTGTCTGTGCTGCCAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS TCA 90 bp ACAGTGCTTTGCTCTCCAGCCTCCCAATCAGCTCTGCCAAGCGGCTaGTCTGGGCTTCCAGACCCTCTTCCTTTGCATCCTCCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TVLCSPASQSALPSG*SGLPDPLPLHPPWQ
Trigger: CTGCCACGGAGGATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGGCTGGAGAGCAAAGCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000567703.1
ENST00000681513.1
CDS CCA 90 bp GCTTTGCTCTCCAGCCTCCCAATCAGCTCTGCCAAGCGGCTGATCTaGGCTTCCAGACCCTCTTCCTTTGCATCCTCCGTGGCAGATGGA +
Preference number: 5 (lower is better)
Translates to: ALLSSLPISSAKRLI*ASRPSSFASSVADG
Trigger: TCCATCTGCCACGGAGGATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGGCTGGAGAGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000567703.1
ENST00000681513.1
CDS-3UTR CAA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCATGGAAGGGTCTTGCCTaGTTCCATAGCCATGAGCTT +
Preference number: 5 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAWKGLA*FHSHEL
Trigger: AAGCTCATGGCTATGGAACAAGGCAAGACCCTTCCA...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS TCA 90 bp GAGTGGGGCTTCCACACCAGGTCTGTGCCGCGCTGTGGCTGGGTTTaGTGTGGTTCTGTCTTGCACTGTGTCCAGCACATAGTAGGGACT +
Preference number: 5 (lower is better)
Translates to: EWGFHTRSVPRCGWV*CGSVLHCVQHIVGT
Trigger: AGTCCCTACTATGTGCTGGACACAGTGCAAGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAAGCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS GCA 90 bp CAGGTCGAACCACAGTGCTTTGCTCTCCAGCCTCCCAATCAGCTCTaGCAAGCGGCTGATCTGGGCTTCCAGACCCTCTTCCTTTGCATC +
Preference number: 5 (lower is better)
Translates to: QVEPQCFALQPPNQL*QAADLGFQTLFLCI
Trigger: GATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGGCTGGAGAGCAAAGCACTGTGGTTCGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000567703.1
ENST00000681513.1
CDS CCA 90 bp TGTTTGCTCTCCAGCCTCCCAATCAGCTCTGCCAAGCGGCTGATCTaGGCTTCCAGACCCTCTTCCTTTGCATCCTCCGTGGCAGATGGA +
Preference number: 5 (lower is better)
Translates to: CLLSSLPISSAKRLI*ASRPSSFASSVADG
Trigger: TCCATCTGCCACGGAGGATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGGCTGGAGAGCAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566836.1
CDS CCA 90 bp CCAGAAGACACACAGAGTGCCCTGTGCACGGCCCCAACACCCGCTTaGTCTCTGTGCATCGCGGTCTTGGTGCATTCTGGAATTTGTCTC +
Preference number: 5 (lower is better)
Translates to: PEDTQSALCTAPTPA*SLCIAVLVHSGICL
Trigger: GAGACAAATTCCAGAATGCACCAAGACCGCGATGCACAGAGACCAAGCGGGTGTTGGGGCCGTGCACAGGGCACTCTGTGTGTCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS-3UTR CAA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTCCGCCCCCTTCAACCTaGGGCTTCACCAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIPPPST*GFTRTW
Trigger: CCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGG...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS GCA 90 bp GAGGTGTTTGCAAGGCCTGGTGACAATGCCAGCCACGGGCAGGACTaGGTTAATTTTGGGGTGCAGGAGGAGAAACAGGACGCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: EVFARPGDNASHGQD*VNFGVQEEKQDAKS
Trigger: ACTCTTGGCGTCCTGTTTCTCCTCCTGCACCCCAAAATTAACGCAGTCCTGCCCGTGGCTGGCATTGTCACCAGGCCTTGCAAACACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CAA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAGCCATGAGCTTGTGGTaGGGGGCAGAGGCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEAMSLW*GAEAGV
Trigger: CACTCCCGCCTCTGCCCCCAACCACAAGCTCATGGC...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTCAGAAACTCGCTCAGTaGCTCGGGGCACACGGCCAT +
Preference number: 5 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIQKLAQ*LGAHGH
Trigger: ATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCTG...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp TGGCTCCAGGAAGCCGCCCCCTTCAACCTTGGGCTTCACCAGGACCTGGCAGCAGGTCCACAAAGTAATTaGGTGTTGTCAGAGTCAATC +
Preference number: 5 (lower is better)
Translates to: WLQEAAPFNLGLHQDLAAGPQSN*VLSESI
Trigger: GATTGACTCTGACAACACCAAATTACTTTGTGGACC...TGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAAGGGGGCGGCTTCCTGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CAA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGAGCTGCAGGTGCATGTaGGTGCCATCTTCATCTGAC +
Preference number: 5 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWSCRCM*VPSSSD
Trigger: GTCAGATGAAGATGGCACCAACATGCACCTGCAGCT...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS TCA 90 bp CTCCTCTGTCTCCCAGAACTCATAGATGACAAAGGTGAAGCCATCTaGGAGCCTCACGGCAGTGATGTGGAAGCAGTTCCTCACGCCAGT +
Preference number: 5 (lower is better)
Translates to: LLCLPELIDDKGEAI*EPHGSDVEAVPHAS
Trigger: ACTGGCGTGAGGAACTGCTTCCACATCACTGCCGTGAGGCTCTCAGATGGCTTCACCTTTGTCATCTATGAGTTCTGGGAGACAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000681513.1
CDS-3UTR CAA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGTTCCCATCATCATTTTaGTCCGCACGGCGGAAAATG +
Preference number: 5 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWFPSSF*SARRKM
Trigger: CATTTTCCGCCGTGCGGACAAAAATGATGATGGGAA...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR CAA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAACTCAGTGTGTCCACCTaGACGTGCCGGAACGCCTTA +
Preference number: 5 (lower is better)
Translates to: RPPSLNNRETPSCGGWIELSVST*TCRNAL
Trigger: TAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAG...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CAA 90 bp CAGGGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGTTCCCATCATCATTTTaGTCCGCACGGCGGAAAATC +
Preference number: 5 (lower is better)
Translates to: QGRPPSLNNRETPSCGGWFPSSF*SARRKI
Trigger: GATTTTCCGCCGTGCGGACAAAAATGATGATGGGAA...CCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CAA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGCGCTGTGGCTGGGTTaGATGTGGTTCTGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKALWLG*MWFCRS
Trigger: GCTCCGACAGAACCACATCAAACCCAGCCACAGCGC...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTTGGAAGGGTCTTGCCTaGTTCCATAGCCATGAGCTT +
Preference number: 5 (lower is better)
Translates to: GRPPSLNNRETPSCGGWIWKGLA*FHSHEL
Trigger: AAGCTCATGGCTATGGAACAAGGCAAGACCCTTCCA...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp CGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAGTCCGACAGAGGTGTTaGCAAGGCCTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: RPPSLNNRETPSCGGWIEVRQRC*QGLVTM
Trigger: CATTGTCACCAGGCCTTGCAAACACCTCTGTCGGAC...TTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CAA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCTCGAACCACAGTGCTTaGCTCTCCAGCCTCCCAATC +
Preference number: 5 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVSNHSA*LSSLPI
Trigger: GATTGGGAGGCTGGAGAGCAAAGCACTGTGGTTCGA...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp GGGCGGCCTCCTTCACTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTCTTGTGGAGGATGGATaGAAAAGAAGCTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: GRPPSLNNRETPSCGGWILVEDG*KRSFCT
Trigger: GGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAG...AATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAGTGAAGGAGGCCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CAA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAACCAACCAGGGTTTATTaGGCGCCTGGGCACAGTGGT +
Preference number: 5 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKPTRVY*APGHSG
Trigger: ACCACTGTGCCCAGGCGCCAAATAAACCCTGGTTGG...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CAA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCAGCTGCAGGTGCATGTaGGTGCCATCTTCATCTGAC +
Preference number: 5 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVSCRCM*VPSSSD
Trigger: GTCAGATGAAGATGGCACCAACATGCACCTGCAGCT...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCTCAGTGTGTCCACCTaGACGTGCCGGAACGCCTTA +
Preference number: 5 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLLSVST*TCRNAL
Trigger: TAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAG...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CAA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCCAACCAGGGTTTATTaGGCGCCTGGGCACAGTGGT +
Preference number: 5 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLPTRVY*APGHSG
Trigger: ACCACTGTGCCCAGGCGCCAAATAAACCCTGGTTGG...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS-3UTR CAA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGTGTTTCCAGGGAGGTaGGGCAAAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLVFPGR*GKVRQR
Trigger: CCTCTGTCGGACTTTGCCCAACCTCCCTGGAAACAC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS TCA 90 bp AGCTCCTTGGTGTCCACATGGTTGGTGTTGTCAGAGTCAATCGTGTaGAAGAGATCCTCCAGTTCTTTCTCATTAAGGACGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: SSLVSTWLVLSESIV*KRSSSSFSLRTPSA
Trigger: TGCAGATGGCGTCCTTAATGAGAAAGAACTGGAGGATCTCTTTCACACGATTGACTCTGACAACACCAACCATGTGGACACCAAGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000681513.1
CDS-3UTR CAA 90 bp ACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAACAAACTGGTCCACGTaGCTCCCACCCTCATATACC +
Preference number: 5 (lower is better)
Translates to: TGKHLLVEDGLKRSFCTKTNWST*LPPSYT
Trigger: GGTATATGAGGGTGGGAGCAACGTGGACCAGTTTGT...TTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS-3UTR CAA 90 bp CACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCACCAAAGTGTCTGTCAGGACTGCGTTAATTTaGGGGTGCAGGAGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: HLLVEDGLKRSFCTKVSVRTALI*GCRRRN
Trigger: GTTTCTCCTCCTGCACCCCAAAATTAACGCAGTCCT...GACAGACACTTTGGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CAA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGGCAGATGGAAGGGTCTaGCCTTGTTCCATAGCCATG +
Preference number: 5 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLADGRV*PCSIAM
Trigger: CATGGCTATGGAACAAGGCAAGACCCTTCCATCTGC...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000565691.5
CDS TCA 90 bp CCATGTGGTCCACAAAGTAATTTGGTGTTGTCAGAGTCAATCGTGTaGAAGAGATCCTCCAGTTCTTTCTCATTAAGGACGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: PCGPQSNLVLSESIV*KRSSSSFSLRTPSA
Trigger: TGCAGATGGCGTCCTTAATGAGAAAGAACTGGAGGATCTCTTTCACACGATTGACTCTGACAACACCAAATTACTTTGTGGACCACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS-3UTR CAA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGTTGGTGTCCACATGGTaGGTGTTGTCAGAGTCAATC +
Preference number: 5 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLLVSTW*VLSESI
Trigger: GATTGACTCTGACAACACCAACCATGTGGACACCAA...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305202.9
CDS-3UTR CAA 90 bp CTTAACAACAGGGAAACACCTTCTTGTGGAGGATGGATTGAAAAGAAGCTTCTGCTTGTGGAGGATGGATaGAAAAGAAGCTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: LNNRETPSCGGWIEKKLLLVEDG*KRSFCT
Trigger: GGTGCAGAAGCTTCTTTTCAATCCATCCTCCACAAG...CAGAAGCTTCTTTTCAATCCATCCTCCACAAGAAGGTGTTTCCCTGTTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
CDS CCA 72 bp GGGATGTTGCAGACAGAGGCCCTCCCCTCACCCACGTaGAAGCGGCTGCCAGTACCACCAGCCTGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: GMLQTEALPSPT*KRLPVPPACSQ
Trigger: CTGGGAGCAGGCTGGTGGTACTGGCAGCCGCTTCCACGTGGGTGAGGGGAGGGCCTCTGTCTGCAACATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS CAA 90 bp GGTCCCCCGCAGATACTGGCGCAGAGAGTCCAGAAACTCGCTCAGTaGCTCGGGGCACACGGCCATCTCCTGCCGGACCAGCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: GPPQILAQRVQKLAQ*LGAHGHLLPDQLQV
Trigger: CACCTGCAGCTGGTCCGGCAGGAGATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCTGGACTCTCTGCGCCAGTATCTGCGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000567703.1
ENST00000681513.1
CDS GCA 72 bp AGGGCCTCAGGCTGGCTCAGTGTGTCCACCTTGACGTaGCGGAACGCCTTACACAGGGGGCTCTGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RASGWLSVSTLT*RNALHRGLCRC
Trigger: GCACCTGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
ENST00000681513.1
CDS CCA 72 bp GCAGCTGGCACCAAGATCCTGGAGAGGGCCTCAGGCTaGCTCAGTGTGTCCACCTTGACGTGCCGGAACGCC +
Preference number: 6 (lower is better)
Translates to: AAGTKILERASG*LSVSTLTCRNA
Trigger: GGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGATCTTGGTGCCAGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
ENST00000681513.1
CDS CAA 72 bp CTGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTaGACGTGCCGGAACGCCTTACACAGGGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LERASGWLSVST*TCRNALHRGLC
Trigger: GCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
ENST00000681513.1
CDS TCA 72 bp TGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTTaGCGTGCCGGAACGCCTTACACAGGGGGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: WRGPQAGSVCPP*RAGTPYTGGSA
Trigger: TGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000564166.1
ENST00000565691.5
ENST00000681513.1
CDS TCA 72 bp GGCAGGGATGGGTGGAGGGCAGCTCCAAGGCTGGCCTaGACCTACAAGACCAGGTGCCTCCTCGTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: GRDGWRAAPRLA*TYKTRCLLVLP
Trigger: AGGCAGAACGAGGAGGCACCTGGTCTTGTAGGTTCAGGCCAGCCTTGGAGCTGCCCTCCACCCATCCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS CCA 72 bp GGAGTGGGGCTTCCACACCAGGTCTGTGCCGCGCTGTaGCTGGGTTTGATGTGGTTCTGTCGGAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: GVGLPHQVCAAL*LGLMWFCRSWL
Trigger: CAGCCAGCTCCGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAAGCCCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000681513.1
CDS CAA 90 bp ACCAAGATCCTGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTaGACGTGCCGGAACGCCTTACACAGGGGGCTCTGCAGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: TKILERASGWLSVST*TCRNALHRGLCRCL
Trigger: GAGGCACCTGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGATCTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000681513.1
CDS CAA 90 bp ACCAAGATCCTGGAGAGGGCCTCAGGCTGGCTCAGTGTGTCCACCTaGACGTGCCGGAACGCCTTACACAGGGGGCTCTGCAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: TKILERASGWLSVST*TCRNALHRGLCRCW
Trigger: CCAGCACCTGCAGAGCCCCCTGTGTAAGGCGTTCCGGCACGTCAAGGTGGACACACTGAGCCAGCCTGAGGCCCTCTCCAGGATCTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564166.1
CDS TCA 72 bp CTGGGCCAGGGAGAGGCAAGCGCTTCCTGCAGCCTCTaGCCGGATACTGGGATCCTTCTCTTCTCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LGQGEASASCSL*PDTGILLFSQE
Trigger: CTCCTGGGAGAAGAGAAGGATCCCAGTATCCGGTCAGAGGCTGCAGGAAGCGCTTGCCTCTCCCTGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS GCA 72 bp AGATACTGGCGCAGAGAGTCCAGAAACTCGCTCAGTTaGTCGGGGCACACGGCCATCTCCTGCCGGACCAGC +
Preference number: 6 (lower is better)
Translates to: RYWRRESRNSLS*SGHTAISCRTS
Trigger: GCTGGTCCGGCAGGAGATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCTGGACTCTCTGCGCCAGTATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS CCA 72 bp TGTGGTTCTGTCGGAGCTGGCTGGTCTGTTCCTCGATaGCCTCCACCGCACTCTCCACTGAGCTCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: CGSVGAGWSVPR*PPPHSPLSSAA
Trigger: CGCTGCTGAGCTCAGTGGAGAGTGCGGTGGAGGCCATCGAGGAACAGACCAGCCAGCTCCGACAGAACCACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000681513.1
CDS CCA 72 bp GGCTCTGCAGGTGCTGGAAGCAGTTCCTCACGCCAGTaGTCCCCCGCAGATACTGGCGCAGAGAGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: GSAGAGSSSSRQ*SPADTGAESPE
Trigger: TTCTGGACTCTCTGCGCCAGTATCTGCGGGGGACCACTGGCGTGAGGAACTGCTTCCAGCACCTGCAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564166.1
CDS CAA 72 bp CAGATACTGGCGCAGAGAGTCCAGAAACTCGCTCAGTaGCTCGGGGCACACGGCCATCTCCTGCCGGACCAG +
Preference number: 6 (lower is better)
Translates to: QILAQRVQKLAQ*LGAHGHLLPDQ
Trigger: CTGGTCCGGCAGGAGATGGCCGTGTGCCCCGAGCAACTGAGCGAGTTTCTGGACTCTCTGCGCCAGTATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS CAA 72 bp CACACAGAGTGCCCTGTGCACGGCCCCAACACCCGCTaGGTCTCTGTGCATCGCGGTCTTGGTGCATTCTGG +
Preference number: 6 (lower is better)
Translates to: HTECPVHGPNTR*VSVHRGLGAFW
Trigger: CCAGAATGCACCAAGACCGCGATGCACAGAGACCAAGCGGGTGTTGGGGCCGTGCACAGGGCACTCTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CAA 90 bp TCCGTGGCAGATGGAAGGGTCTTGCCTTGTTCCATAGCCATGAGCTaGTGGTTGGGGGCAGAGGCGGGAGTGGGGCTTCCACACCAGGTC +
Preference number: 6 (lower is better)
Translates to: SVADGRVLPCSIAMS*WLGAEAGVGLPHQV
Trigger: GACCTGGTGTGGAAGCCCCACTCCCGCCTCTGCCCCCAACCACAAGCTCATGGCTATGGAACAAGGCAAGACCCTTCCATCTGCCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS GCA 72 bp ACAGACACTCCCCCAGAAGACACACAGAGTGCCCTGTaGACGGCCCCAACACCCGCTTGGTCTCTGTGCATC +
Preference number: 6 (lower is better)
Translates to: TDTPPEDTQSAL*TAPTPAWSLCI
Trigger: GATGCACAGAGACCAAGCGGGTGTTGGGGCCGTGCACAGGGCACTCTGTGTGTCTTCTGGGGGAGTGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CCA 72 bp ACACAGAGTGCCCTGTGCACGGCCCCAACACCCGCTTaGTCTCTGTGCATCGCGGTCTTGGTGCATTCTGGA +
Preference number: 6 (lower is better)
Translates to: TQSALCTAPTPA*SLCIAVLVHSG
Trigger: TCCAGAATGCACCAAGACCGCGATGCACAGAGACCAAGCGGGTGTTGGGGCCGTGCACAGGGCACTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CAA 72 bp CTTCCACACCAGGTCTGTGCCGCGCTGTGGCTGGGTTaGATGTGGTTCTGTCGGAGCTGGCTGGTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LPHQVCAALWLG*MWFCRSWLVCS
Trigger: GGAACAGACCAGCCAGCTCCGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000681513.1
CDS TCA 72 bp ACCGCACTCTCCACTGAGCTCAGCAGCGACTGGATCTaGTTGGCCGTCTCCTTCAGGAGGAAGCGGGTCACA +
Preference number: 6 (lower is better)
Translates to: TALSTELSSDWI*LAVSFRRKRVT
Trigger: TGTGACCCGCTTCCTCCTGAAGGAGACGGCCAATCAGATCCAGTCGCTGCTGAGCTCAGTGGAGAGTGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000681513.1
CDS TCA 72 bp TTCCACACCAGGTCTGTGCCGCGCTGTGGCTGGGTTTaGTGTGGTTCTGTCGGAGCTGGCTGGTCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: FHTRSVPRCGWV*CGSVGAGWSVP
Trigger: AGGAACAGACCAGCCAGCTCCGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000681513.1
CDS GCA 72 bp GCCCTGTGCACGGCCCCAACACCCGCTTGGTCTCTGTaGATCGCGGTCTTGGTGCATTCTGGAATTTGTCTC +
Preference number: 6 (lower is better)
Translates to: ALCTAPTPAWSL*IAVLVHSGICL
Trigger: GAGACAAATTCCAGAATGCACCAAGACCGCGATGCACAGAGACCAAGCGGGTGTTGGGGCCGTGCACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CCA 72 bp AAGCAGTTCCTCACGCCAGTGGTCCCCCGCAGATACTaGCGCAGAGAGTCCAGAAACTCGCTCAGTTGCTCG +
Preference number: 6 (lower is better)
Translates to: KQFLTPVVPRRY*RRESRNSLSCS
Trigger: CGAGCAACTGAGCGAGTTTCTGGACTCTCTGCGCCAGTATCTGCGGGGGACCACTGGCGTGAGGAACTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000681513.1
CDS CCA 72 bp GGAGTGGGGCTTCCACACCAGGTCTGTGCCGCGCTGTaGCTGGGTTTGATGTGGTTCTGTCTTGCACTGTGT +
Preference number: 6 (lower is better)
Translates to: GVGLPHQVCAAL*LGLMWFCLALC
Trigger: ACACAGTGCAAGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAAGCCCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CAA 72 bp TTTCCAGGGAGGTTGGGCAAAGTCCGACAGAGGTGTTaGCAAGGCCTGGTGACAATGCCAGCCACGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FPGRLGKVRQRC*QGLVTMPATGR
Trigger: CCTGCCCGTGGCTGGCATTGTCACCAGGCCTTGCAAACACCTCTGTCGGACTTTGCCCAACCTCCCTGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS CAA 90 bp GGAGTGGGGCTTCCACACCAGGTCTGTGCCGCGCTGTGGCTGGGTTaGATGTGGTTCTGTCTTGCACTGTGTCCAGCACATAGTAGGGAC +
Preference number: 6 (lower is better)
Translates to: GVGLPHQVCAALWLG*MWFCLALCPAHSRD
Trigger: GTCCCTACTATGTGCTGGACACAGTGCAAGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAAGCCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CAA 90 bp CCTGGTGTGTTTCCAGGGAGGTTGGGCAAAGTCCGACAGAGGTGTTaGCAAGGCCTGGTGACAATGCCAGCCACGGGCAGGACTGCGTTA +
Preference number: 6 (lower is better)
Translates to: PGVFPGRLGKVRQRC*QGLVTMPATGRTAL
Trigger: TAACGCAGTCCTGCCCGTGGCTGGCATTGTCACCAGGCCTTGCAAACACCTCTGTCGGACTTTGCCCAACCTCCCTGGAAACACACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS CAA 90 bp CCCAGAAGACACACAGAGTGCCCTGTGCACGGCCCCAACACCCGCTaGGTCTCTGTGCATCGCGGTCTTGGTGCATTCTGGAATTTGTCT +
Preference number: 6 (lower is better)
Translates to: PRRHTECPVHGPNTR*VSVHRGLGAFWNLS
Trigger: AGACAAATTCCAGAATGCACCAAGACCGCGATGCACAGAGACCAAGCGGGTGTTGGGGCCGTGCACAGGGCACTCTGTGTGTCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS TCA 72 bp TGCTCTCCAGCCTCCCAATCAGCTCTGCCAAGCGGCTaGTCTGGGCTTCCAGACCCTCTTCCTTTGCATCCT +
Preference number: 6 (lower is better)
Translates to: CSPASQSALPSG*SGLPDPLPLHP
Trigger: AGGATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTGGCAGAGCTGATTGGGAGGCTGGAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS GCA 72 bp CAAGCGGCTGATCTGGGCTTCCAGACCCTCTTCCTTTaGATCCTCCGTGGCAGATGGAAGGGTCTTGCCTTG +
Preference number: 6 (lower is better)
Translates to: QAADLGFQTLFL*ILRGRWKGLAL
Trigger: CAAGGCAAGACCCTTCCATCTGCCACGGAGGATGCAAAGGAAGAGGGTCTGGAAGCCCAGATCAGCCGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS GCA 72 bp GCAAGGCCTGGTGACAATGCCAGCCACGGGCAGGACTaGGTTAATTTTGGGGTGCAGGAGGAGAAACAGGAC +
Preference number: 6 (lower is better)
Translates to: ARPGDNASHGQD*VNFGVQEEKQD
Trigger: GTCCTGTTTCTCCTCCTGCACCCCAAAATTAACGCAGTCCTGCCCGTGGCTGGCATTGTCACCAGGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS GCA 72 bp TGCATGTTGGTGCCATCTTCATCTGACAGGCGCTGCTaGAGGTCGAACCACAGTGCTTTGCTCTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: CMLVPSSSDRRC*RSNHSALLSSL
Trigger: GAGGCTGGAGAGCAAAGCACTGTGGTTCGACCTGCAGCAGCGCCTGTCAGATGAAGATGGCACCAACATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000567703.1
ENST00000681513.1
CDS GCA 72 bp AGGTGCATGTTGGTGCCATCTTCATCTGACAGGCGCTaGTGCAGGTCGAACCACAGTGCTTTGCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RCMLVPSSSDRR*CRSNHSALLSS
Trigger: GCTGGAGAGCAAAGCACTGTGGTTCGACCTGCAGCAGCGCCTGTCAGATGAAGATGGCACCAACATGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000567703.1
ENST00000681513.1
CDS CCA 72 bp CACCAGGTCTGTGCCGCGCTGTGGCTGGGTTTGATGTaGTTCTGTCTTGCACTGTGTCCAGCACATAGTAGG +
Preference number: 6 (lower is better)
Translates to: HQVCAALWLGLM*FCLALCPAHSR
Trigger: CCTACTATGTGCTGGACACAGTGCAAGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CAA 90 bp CAAGGCCTGGTGACAATGCCAGCCACGGGCAGGACTGCGTTAATTTaGGGGTGCAGGAGGAGAAACAGGACGCCAAGAGTTCAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: QGLVTMPATGRTALI*GCRRRNRTPRVQKS
Trigger: GCTTTTCTGAACTCTTGGCGTCCTGTTTCTCCTCCTGCACCCCAAAATTAACGCAGTCCTGCCCGTGGCTGGCATTGTCACCAGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565691.5
CDS TCA 72 bp TTCCACACCAGGTCTGTGCCGCGCTGTGGCTGGGTTTaGTGTGGTTCTGTCTTGCACTGTGTCCAGCACATA +
Preference number: 6 (lower is better)
Translates to: FHTRSVPRCGWV*CGSVLHCVQHI
Trigger: TATGTGCTGGACACAGTGCAAGACAGAACCACATCAAACCCAGCCACAGCGCGGCACAGACCTGGTGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567703.1
CDS CCA 72 bp TTGGCCGTCTCCTTCAGGAGGAAGCGGGTCACAAACTaGTCCACGTTGCTCCCACCCTCATATACCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LAVSFRRKRVTN*STLLPPSYTFL
Trigger: CAAGAAGGTATATGAGGGTGGGAGCAACGTGGACCAGTTTGTGACCCGCTTCCTCCTGAAGGAGACGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000681513.1
CDS CAA 72 bp CTTTGCATCCTCCGTGGCAGATGGAAGGGTCTTGCCTaGTTCCATAGCCATGAGCTTGTGGTTGGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: LCILRGRWKGLA*FHSHELVVGGR
Trigger: TCTGCCCCCAACCACAAGCTCATGGCTATGGAACAAGGCAAGACCCTTCCATCTGCCACGGAGGATGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS CAA 72 bp TCTTCCTTTGCATCCTCCGTGGCAGATGGAAGGGTCTaGCCTTGTTCCATAGCCATGAGCTTGTGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: SSFASSVADGRV*PCSIAMSLWLG
Trigger: CCCCAACCACAAGCTCATGGCTATGGAACAAGGCAAGACCCTTCCATCTGCCACGGAGGATGCAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000566836.1
ENST00000567703.1
ENST00000681513.1
CDS TCA 72 bp CTCCCAGAACTCATAGATGACAAAGGTGAAGCCATCTaGGAGCCTCACGGCAGTGATGTGGAAGCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: LPELIDDKGEAI*EPHGSDVEAVP
Trigger: AGGAACTGCTTCCACATCACTGCCGTGAGGCTCTCAGATGGCTTCACCTTTGTCATCTATGAGTTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305202.9
ENST00000565691.5
ENST00000681513.1
CDS TCA 72 bp GTGTCCACATGGTTGGTGTTGTCAGAGTCAATCGTGTaGAAGAGATCCTCCAGTTCTTTCTCATTAAGGACG +
Preference number: 6 (lower is better)
Translates to: VSTWLVLSESIV*KRSSSSFSLRT
Trigger: CGTCCTTAATGAGAAAGAACTGGAGGATCTCTTTCACACGATTGACTCTGACAACACCAACCATGTGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305202.9
ENST00000681513.1
CDS TCA 72 bp CCACAAAGTAATTTGGTGTTGTCAGAGTCAATCGTGTaGAAGAGATCCTCCAGTTCTTTCTCATTAAGGACG +
Preference number: 6 (lower is better)
Translates to: PQSNLVLSESIV*KRSSSSFSLRT
Trigger: CGTCCTTAATGAGAAAGAACTGGAGGATCTCTTTCACACGATTGACTCTGACAACACCAAATTACTTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565691.5