RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFV1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167792

Ensembl transcript IDs: ENST00000322776.11, ENST00000415352.6, ENST00000524838.5, ENST00000524876.5, ENST00000525086.5, ENST00000526138.5, ENST00000526169.1, ENST00000526770.5, ENST00000527355.5, ENST00000527923.1, ENST00000528314.1, ENST00000528328.1, ENST00000528377.1, ENST00000528548.5, ENST00000529867.5, ENST00000529927.5, ENST00000530014.5, ENST00000530103.5, ENST00000530638.1, ENST00000531250.1, ENST00000532244.5, ENST00000532260.1, ENST00000532303.5, ENST00000532343.5, ENST00000533075.5, ENST00000533919.5, ENST00000534139.5, ENST00000534352.1, ENST00000647561.1

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGGGAGTCGATCTCGGCCGGCCGGGCA +
Preference number: 1 (lower is better)
Translates to: QAAPSPRAQIVWPSI*LLISHRESISAGRA
Trigger: TGCCCGGCCGGCCGAGATCGACTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR GCA 90 bp GCAGCTTGTGAGGATCATGGCGTAAGATCTCCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCC +
Preference number: 1 (lower is better)
Translates to: AACEDHGVRSPGPCR*PAPPRLRSPPDTWA
Trigger: GGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTTACGCCATGATCCTCACAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR GCA 90 bp CTTCCAGCAGCTTGTGAGGATCATGGCGTAAGATCTCCCGGTCCTTaGAGGTGCCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACT +
Preference number: 1 (lower is better)
Translates to: LPAACEDHGVRSPGP*RCPAPPRLRSPPDT
Trigger: AGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTTACGCCATGATCCTCACAAGCTGCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR-3UTR TCA 90 bp CGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGCAGCCTGCCGGGCCTaGTGCTGCTGGGCAAACCGC +
Preference number: 2 (lower is better)
Translates to: RCIRSSSSGRKWRIRPCTAACRA*CCWANR
Trigger: GCGGTTTGCCCAGCAGCATCAGGCCCGGCAGGCTGC...TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527355.5
3UTR-3UTR GCA 90 bp CCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGGCCAGGCAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCC +
Preference number: 2 (lower is better)
Translates to: PLLELRPKVADQTLHRPGRPVCA*TSASKS
Trigger: GGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCT...GCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
3UTR CAA 90 bp GCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAGTCGATCTCGGCCGGCCGGGCATCC +
Preference number: 2 (lower is better)
Translates to: AAPSPRAQIVWPSIC*LISHRESISAGRAS
Trigger: GGATGCCCGGCCGGCCGAGATCGACTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR-3UTR CCA 90 bp CCGAAAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCGTCCAGCATTCCACATaGATAGACGCAGGACAGCAG +
Preference number: 2 (lower is better)
Translates to: PKVADQTLHRPGGPVTQSVQHST*IDAGQQ
Trigger: CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGAC...GCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527355.5
3UTR-3UTR CCA 90 bp CAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACA +
Preference number: 2 (lower is better)
Translates to: QTAASAPRAPAESGGSDPSSGRK*RIRPCT
Trigger: TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCT...AGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR-3UTR CCA 90 bp GGGAAGCCAGCGCCTCCACGGCCCCTCAAACCCGATGTCTTGATCTCGCCCAGGTTCAGCCTCCAGTCATaGCGGCCGTACAGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: GKPAPPRPLKPDVLISPRFSLQS*RPYRLV
Trigger: CACCAACCTGTACGGCCGCCATGACTGGAGGCTGAA...CCTGGGCGAGATCAAGACATCGGGTTTGAGGGGCCGTGGAGGCGCTGGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR-3UTR GCA 90 bp CAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAA +
Preference number: 2 (lower is better)
Translates to: QARRPRHPEHKSYGLLSAAQACL*LHQRIE
Trigger: TTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGC...AGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
3UTR-3UTR CCA 90 bp ATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCACACCCTCACGGCATaGGGTACACTGGCCACAGCT +
Preference number: 2 (lower is better)
Translates to: IRPCTGQAAPSPRAQIVWHTLTA*GTLATA
Trigger: AGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTG...CCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
3UTR-3UTR TCA 90 bp GGTGCCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCCTGCCATCGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCT +
Preference number: 2 (lower is better)
Translates to: GARLPLVCVHHQILGPAIGRTGW*KSGLHP
Trigger: AGGATGAAGACCGGATTTTCACCAACCTGTACGGCC...GATGGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR CAA 90 bp AGATACTTGGGCCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCAGCGCCTCCACGGCCCCTCAAACCC +
Preference number: 2 (lower is better)
Translates to: RYLGLPSEGLFMKLH*RPVGKPAPPRPLKP
Trigger: GGGTTTGAGGGGCCGTGGAGGCGCTGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGGCCCAAGTATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR-3UTR GCA 90 bp CTGGCCACAGCTCTCGTGCTTATAGAACTCAATGAGGCGGGCGATGGCTTTCACCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: LATALVLIELNEAGDGFHRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...GTGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGCACGAGAGCTGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
3UTR CAA 90 bp TCGCCCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCCTCCAGTCA +
Preference number: 2 (lower is better)
Translates to: SPRIQSGPFSRISFV*YQSPRLREPFSLQS
Trigger: TGACTGGAGGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR-3UTR GCA 90 bp CAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 2 (lower is better)
Translates to: QARRPRHPEHKSYGLLSAVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...AGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR CCA 72 bp AACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCG +
Preference number: 3 (lower is better)
Translates to: NRCIRSSSSGRK*RIRPCTGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR TCA 72 bp AGCCAGCGCCTCCACGGCCCCTCAAACCCGATGTCTTaGTCTCGCCCAGGATCCAGTCGGGCCCCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: SQRLHGPSNPMS*SRPGSSRAPSA
Trigger: TGCTGAAGGGGCCCGACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAGGGGCCGTGGAGGCGCTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR-3UTR CAA 90 bp TCATGGCGTAAGATCTCCCGGTCCTTGCAGGTGCCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTaGGGCCTGCCATCTGAGGGC +
Preference number: 3 (lower is better)
Translates to: SWRKISRSLQVPGSPSSAFTTRY*GLPSEG
Trigger: GCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAA...CGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTTACGCCATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR-3UTR CAA 90 bp AAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAATGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 3 (lower is better)
Translates to: KWRIRPCTGQAAPSPRAQWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...TTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR GCA 72 bp GAGGATCATGGCGTAAGATCTCCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTGCGTTCACCACCAGAT +
Preference number: 3 (lower is better)
Translates to: EDHGVRSPGPCR*PAPPRLRSPPD
Trigger: ATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTTACGCCATGATCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR GCA 72 bp GCTTGTGAGGATCATGGCGTAAGATCTCCCGGTCCTTaGAGGTGCCCGGCTCCCCCTCGTCTGCGTTCACCA +
Preference number: 3 (lower is better)
Translates to: ACEDHGVRSPGP*RCPAPPRLRSP
Trigger: TGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTTACGCCATGATCCTCACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR GCA 72 bp CATGACGATCACCGCAGCTGTGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAAGTCCATCAGCACCGT +
Preference number: 3 (lower is better)
Translates to: HDDHRSCAQACL*LHQRIEVHQHR
Trigger: ACGGTGCTGATGGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
3UTR-3UTR CAA 90 bp TGGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGCAGCACTCGCTTTATaGTCCAGCATTCCACATGGA +
Preference number: 3 (lower is better)
Translates to: WRIRPCTGQAAPSPRAQIAALAL*SSIPHG
Trigger: TCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGC...GATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527355.5
3UTR-3UTR CAA 90 bp CCACCAGGCAGCCTTCCAGCAGCTTGTGAGGATCATGGCGTAAGATCTCCCGGTTGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: PPGSLPAACEDHGVRSPGWRPYR*VKIRSS
Trigger: TGAAGACCGGATTTTCACCAACCTGTACGGCCGCCA...ACCGGGAGATCTTACGCCATGATCCTCACAAGCTGCTGGAAGGCTGCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
3UTR TCA 72 bp TACACTGGCCACAGCTCTCGTGCTTATAGAACTCAATaGGGCGGGCGATGGCTTTCACGATGTCCGTCGAGC +
Preference number: 3 (lower is better)
Translates to: YTGHSSRAYRTQ*GGRWLSRCPSS
Trigger: GCTCGACGGACATCGTGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGCACGAGAGCTGTGGCCAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp GCAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGGCGGATCAGACCCTaGACAGGCCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ANRCIRSSSSGRKWRIRPWRIRP*TGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA...GGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR GCA 90 bp TGCTGGGCAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCTGGCGGATCAGACCCTaGACAGGCCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: CWANRCIRSSSSGRKWRIWRIRP*TGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA...GATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR TCA 90 bp CCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTAGCAGCCTGCCGGGCCTaGTGCTGCTGGGCAAACCGC +
Preference number: 4 (lower is better)
Translates to: PAQARRPRHPEHKSYGLLAACRA*CCWANR
Trigger: GCGGTTTGCCCAGCAGCATCAGGCCCGGCAGGCTGC...TAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS-3UTR CCA 90 bp CCACGGCCCCTCAAACCCGATGTCTTGATCTCGCCCAGGATCCAGTCGGGCCCCTCGCGGCGGGCCAGATaGGTCACCTCACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PRPLKPDVLISPRIQSGPSRRAR*VTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGA...GGGGCCCGACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAGGGGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp GCAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCTGGGCAAACCGCTaGATCCGCTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ANRCIRSSSSGRKWRIRPCWANR*IRSSSS
Trigger: GGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA...GGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR GCA 90 bp AACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCTGCTGGGCAAACCGCTaGATCCGCTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NRCIRSSSSGRKWRIRPCCWANR*IRSSSS
Trigger: GGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA...GCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR CAA 72 bp AAGCCAGCGCCTCCACGGCCCCTCAAACCCGATGTCTaGATCTCGCCCAGGATCCAGTCGGGCCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KPAPPRPLKPDV*ISPRIQSGPFS
Trigger: GCTGAAGGGGCCCGACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAGGGGCCGTGGAGGCGCTGGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp CCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCCTGCCATCTGAGGGCTTATGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPRLRSPPDTWACHLRAYEQPPC*QHRGGP
Trigger: TGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTC...ATAAGCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp TCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCGCTTCAGGCGGGGCTTaGCCTGCTTGCCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: SDPAQARRPRHPEHKSYGASGGA*PACPQW
Trigger: CCATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGC...GCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp CACGATGTCCGTCGAGCGGTCCATGACGATCACCGCAGCTGTGCCCAGGCCTGTCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HDVRRAVHDDHRSCAQACRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...ACAGGCCTGGGCACAGCTGCGGTGATCGTCATGGACCGCTCGACGGACATCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CCA 90 bp GCAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: ANRCIRSSSSGRKWRIRPHGGRL*GTLPLS
Trigger: AGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTG...GGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CCA 90 bp ACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCGACAGCAGGCCAGGGTaGTGGGCTAAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TLHRPGGPVTQSTNRMAFDSRPG*WAKRQP
Trigger: AGGCTGCCTCTTAGCCCACCACCCTGGCCTGCTGTC...GAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527355.5
3UTR CAA 72 bp GGCCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCAGCGCCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: GLPSEGLFMKLH*RPVGKPAPPRP
Trigger: GGGCCGTGGAGGCGCTGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR TCA 90 bp CGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACACCTCAATGGACTCGATaGGCGCTGTCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RCIRSSSSGRKWRIRPCTPQWTR*ALSPLH
Trigger: GTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGG...TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR TCA 90 bp ATGGCTTTCACGATGTCCGTCGAGCGGTCCATGACGATCACCGCAGCTGTGCCCCCGTCGAGCGGTCCATaGCGATCACCGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: MAFTMSVERSMTITAAVPPSSGP*RSPQLC
Trigger: GCACAGCTGCGGTGATCGTCATGGACCGCTCGACGG...GGGCACAGCTGCGGTGATCGTCATGGACCGCTCGACGGACATCGTGAAAGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp GGTGCCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCCTGCCATCCGGCTCCCCCTCGTCTaGGTTCACCACCAGATACTT +
Preference number: 4 (lower is better)
Translates to: GARLPLVCVHHQILGPAIRLPLV*VHHQIL
Trigger: AAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCG...GATGGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp GGCCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTTGAGGCCAGTGGGGAAGCCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GLPSEGLFMKLHLRPVGKPGPCR*PAPPRL
Trigger: CAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGG...CTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp GTCCGTCGAGCGGTCCATGACGATCACCGCAGCTGTGCCCAGGCCTGTCTGTGCGATTGTGGGGGACACTaGCACTGTCTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: VRRAVHDDHRSCAQACLCDCGGH*HCLHVG
Trigger: GCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATC...GCACAGACAGGCCTGGGCACAGCTGCGGTGATCGTCATGGACCGCTCGACGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CCA 90 bp CAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: QTAASAPRAPAESGGSDPHGGRL*GTLPLS
Trigger: AGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTG...AGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CCA 90 bp TGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGGCCGGCATGGGGTACACTaGCCACAGCTCTCGTGCTTA +
Preference number: 4 (lower is better)
Translates to: CIRSSSSGRKWRIRPCTGRHGVH*PQLSCL
Trigger: TAAGCACGAGAGCTGTGGCCAGTGTACCCCATGCCG...GCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CCA 90 bp TATCTGCTTGCTGATCTCCCACAGGGAGTCGATCTCGGCCGGCCGGGCATCCCCCACACCCTCACGGCATaGGGTACACTGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: YLLADLPQGVDLGRPGIPHTLTA*GTLATA
Trigger: AGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTG...GGGGATGCCCGGCCGGCCGAGATCGACTCCCTGTGGGAGATCAGCAAGCAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CCA 90 bp GCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGGTCCAGCATTCCACATaGATAGACGCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: APRAPAESGGSDPAQARRVQHST*IDAGQQ
Trigger: CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGAC...CCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS-3UTR TCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGCAGCCTGCCGGGCCTaGTGCTGCTGGGCAAACCGC +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVAACRA*CCWANR
Trigger: GCGGTTTGCCCAGCAGCATCAGGCCCGGCAGGCTGC...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRREQPPC*QHRGGP
Trigger: TGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTC...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TGQAAPSPRAQIVWPSICRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...GCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR GCA 90 bp CGAAAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACCCCCTCACGAAACGTaGCATCACCTTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: RKWRIRPCTGQAAPSPRAPPHET*HHLVHP
Trigger: TGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG...TGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CCA 90 bp CAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTCGTTGGCCACAGTTGTaGGGCAGCCAAACACTCCCA +
Preference number: 4 (lower is better)
Translates to: QTAASAPRAPAESGGSDPRWPQL*GSQTLP
Trigger: TGGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACG...AGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CCA 90 bp ATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: IRPCTGQAAPSPRAQIVWSSGRK*RIRPCT
Trigger: TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCT...CCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR TCA 90 bp CAGGTGCCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCCTGCCAGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: QVPGSPSSAFTTRYLGLPGRTGW*KSGLHP
Trigger: AGGATGAAGACCGGATTTTCACCAACCTGTACGGCC...TGGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR TCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGGCAGCCTGCCGGGCCTaGTGCTGCTGGGCAAACCGC +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQAACRA*CCWANR
Trigger: GCGGTTTGCCCAGCAGCATCAGGCCCGGCAGGCTGC...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGCAGCCTGCCGGGCCTaGTGCTGCTGGGCAAACCGC +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARAACRA*CCWANR
Trigger: GCGGTTTGCCCAGCAGCATCAGGCCCGGCAGGCTGC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGCAGCCTGCCGGGCCTaGTGCTGCTGGGCAAACCGC +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGAACRA*CCWANR
Trigger: GCGGTTTGCCCAGCAGCATCAGGCCCGGCAGGCTGC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGEQPPC*QHRGGP
Trigger: TGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAEQPPC*QHRGGP
Trigger: TGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTC...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQEQPPC*QHRGGP
Trigger: TGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTC...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQPGPCR*PAPPRL
Trigger: CAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGG...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAPGPCR*PAPPRL
Trigger: CAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGPGPCR*PAPPRL
Trigger: CAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARPGPCR*PAPPRL
Trigger: CAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACCCGGTCCTTGCAGGTaGCCGGCTCCCCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTPGPCR*PAPPRL
Trigger: CAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTTGAGGCCAGTGGGGAAGAGATCTCCCGGTCCTTaGAGGTGCCCGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GLPSEGLFMKLHLRPVGKRSPGP*RCPAPP
Trigger: AGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCT...CTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTGGCGGATCAGACCCTaGACAGGCCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGWRIRP*TGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGTGGCGGATCAGACCCTaGACAGGCCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVWRIRP*TGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTGGCGGATCAGACCCTaGACAGGCCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQWRIRP*TGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGTGGCGGATCAGACCCTaGACAGGCCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARWRIRP*TGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTTGGCGGATCAGACCCTaGACAGGCCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGWRIRP*TGQAAP
Trigger: CGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GCCAGTGGGGAAGCCAGCGCCTCCACGGCCCCTCAAACCCGATGTCTTGATCTCTCACCACCAGATACTTaGGCCTGCCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASGEASASTAPQTRCLDLSPPDT*ACHLRA
Trigger: AGCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGA...GAGATCAAGACATCGGGTTTGAGGGGCCGTGGAGGCGCTGGCTTCCCCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAAGCCCTGCCAGACTGTaGGCTTCCCCACCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTASPARL*ASPPRA
Trigger: CGCCCGGGGTGGGGAAGCCCACAGTCTGGCAGGGCT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCTGGCGCCGGGGCTTCTaGGAGATGTGGTCCCACCGG +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRWRRGF*EMWSHR
Trigger: CCGGTGGGACCACATCTCCCAGAAGCCCCGGCGCCA...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR TCA 90 bp CCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCCTGCCATCTGAGGTCAAACCCGATGTCTTaGTCTCGCCCAGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: PAPPRLRSPPDTWACHLRSNPMS*SRPGSS
Trigger: ACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGA...CCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR TCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGTGTCCCAGCCGCCCGTaGCACCCCCAGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRCPSRP*HPQHAS
Trigger: AGAAGCATGCTGGGGGTGTCACGGGCGGCTGGGACA...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGTGTCCCAGCCGCCCGTaGCACCCCCAGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVCPSRP*HPQHAS
Trigger: AGAAGCATGCTGGGGGTGTCACGGGCGGCTGGGACA...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTCCTCGGGGGAGGACTaGGAGGCCAGTGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQASSGED*EASALA
Trigger: CGCCAAGGCACTGGCCTCTCAGTCCTCCCCCGAGGA...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR GCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGAGATCTCCCGGTCCTTaGAGGTGCCCGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVRSPGP*RCPAPP
Trigger: AGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCT...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TCACGAAACGTGCCATCACCTTGTTCATCCAGTCCACACCCTCACGGCATGGGGAGGCGGGGCTTGCCCTaGTTGCCCTCAATGGACTCG +
Preference number: 4 (lower is better)
Translates to: SRNVPSPCSSSPHPHGMGRRGLP*LPSMDS
Trigger: CGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCGCCT...CCCCATGCCGTGAGGGTGTGGACTGGATGAACAAGGTGATGGCACGTTTCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp TGGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: WRIRPCTGQAAPSPRAQIVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...GATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGCCCAGTGCGAGCCCTaGCAGACTGTGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVAQCEP*QTVGFP
Trigger: GGGGAAGCCCACAGTCTGGCAGGGCTCGCACTGGGC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp CGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RIRPCTGQAAPSPRAQIVSTVQG*LTWPEM
Trigger: CATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA...TACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CCA 90 bp AAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGTCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KPLHPLLELRPKVADQTLSTVQG*LTWPEM
Trigger: CATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA...CAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACAGCAGCGGCAGCTaGAGGGTGGGCAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGHSSGS*RVGSTR
Trigger: GCGAGTGCTGCCCACCCTCCAGCTGCCGCTGCTGTG...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACAGCAGCGGCAGCTaGAGGGTGGGCAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQHSSGS*RVGSTR
Trigger: GCGAGTGCTGCCCACCCTCCAGCTGCCGCTGCTGTG...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGAGAGGCCAGTGCCTTaGCGCCGGGGCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGERPVP*RRGFWE
Trigger: CTCCCAGAAGCCCCGGCGCCAAGGCACTGGCCTCTC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR TCA 90 bp CCCGATGTCTTGATCTCGCCCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCCCTTCCAGCAGCTTGTaGGGATCATGGCGTAAGATC +
Preference number: 4 (lower is better)
Translates to: PDVLISPRIQSGPFSRISPSSSL*GSWRKI
Trigger: GATCTTACGCCATGATCCTCACAAGCTGCTGGAAGG...GGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGGGCGAGATCAAGACATCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR TCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGTGTCCCAGCCGCCCGTaGCACCCCCAGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQCPSRP*HPQHAS
Trigger: AGAAGCATGCTGGGGGTGTCACGGGCGGCTGGGACA...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTTGCTGATCTCCCACTGTCCCAGCCGCCCGTaGCACCCCCAGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSPRAQIVWPSICLLISHCPSRP*HPQHAS
Trigger: AGAAGCATGCTGGGGGTGTCACGGGCGGCTGGGACA...GTGGGAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS-3UTR TCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTGTCCCAGCCGCCCGTaGCACCCCCAGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQACPSRP*HPQHAS
Trigger: AGAAGCATGCTGGGGGTGTCACGGGCGGCTGGGACA...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGTGTCCCAGCCGCCCGTaGCACCCCCAGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQCPSRP*HPQHAS
Trigger: AGAAGCATGCTGGGGGTGTCACGGGCGGCTGGGACA...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCCGTCGAGCGGTCCATaGCGATCACCGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGPSSGP*RSPQLC
Trigger: GCACAGCTGCGGTGATCGTCATGGACCGCTCGACGG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCCGTCGAGCGGTCCATaGCGATCACCGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVPSSGP*RSPQLC
Trigger: GCACAGCTGCGGTGATCGTCATGGACCGCTCGACGG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCCGTCGAGCGGTCCATaGCGATCACCGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARPSSGP*RSPQLC
Trigger: GCACAGCTGCGGTGATCGTCATGGACCGCTCGACGG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTTGCTGATCTCACACCGAGCGGTCCATaGCGATCACCGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GPVTQSTNRMAFYLLADLTPSGP*RSPQLC
Trigger: GCACAGCTGCGGTGATCGTCATGGACCGCTCGGTGT...GAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS-3UTR TCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCCGTGTCGCCGCTaGAACGCACAGATACCCGCG +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGQPCRR*NAQIPA
Trigger: CGCGGGTATCTGTGCGTTTCAGCGGCGACACGGCTG...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532303.5
CDS-3UTR GCA 90 bp TTGCAGGTGCCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCCTGCCAGATACTTGGGCCTaGCATCTGAGGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: LQVPGSPSSAFTTRYLGLPDTWA*HLRAYS
Trigger: TGAATAAGCCCTCAGATGGCAGGCCCAAGTATCTGG...CAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCAGATCTCCCGGTCCTTaGAGGTGCCCGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGRSPGP*RCPAPP
Trigger: AGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCT...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGAGATCTCCCGGTCCTTaGAGGTGCCCGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQRSPGP*RCPAPP
Trigger: AGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCT...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAAGATCTCCCGGTCCTTaGAGGTGCCCGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTARSPGP*RCPAPP
Trigger: AGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAGGCGGGGCTTGCCCTaGTTGCCCTCAATGGACTCG +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRRRGLP*LPSMDS
Trigger: CGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCGCCT...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGAGGCGGGGCTTGCCCTaGTTGCCCTCAATGGACTCG +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVRRGLP*LPSMDS
Trigger: CGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCGCCT...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAA +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRAQACL*LHQRIE
Trigger: TTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGC...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTGGCCACAGCTCTCGTGCTTATAGAACTCAATGAGGCGGGCGATGGCTTTCACGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAA +
Preference number: 4 (lower is better)
Translates to: LATALVLIELNEAGDGFHAQACL*LHQRIE
Trigger: TTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGC...GTGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGCACGAGAGCTGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTAGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RIRPCTGQAAPSPRAQIVVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...TACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGTGCTGGGCAAACCGCTaGATCCGCTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRCWANR*IRSSSS
Trigger: GGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGTCGCGGCGGGCCAGATaGGTCACCTCACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQSRRAR*VTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGA...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTCGCGGCGGGCCAGATaGGTCACCTCACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQASRRAR*VTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGA...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCTCGCGGCGGGCCAGATaGGTCACCTCACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGSRRAR*VTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGA...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGATCGCGGCGGGCCAGATaGGTCACCTCACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGSRRAR*VTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGA...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGAGGCAGCCTGCCGGGCCTGATGCTGCTGGGCAAACCGCTGCATCCGCTCCTCCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: RGSLPGLMLLGKPLHPLLQGWLT*PEMLNS
Trigger: ACTATTCAACATCTCTGGCCATGTCAACCACCCTTG...GAGGAGCGGATGCAGCGGTTTGCCCAGCAGCATCAGGCCCGGCAGGCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS-3UTR CCA 90 bp GGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: GGSDPAQARRPRHPEHKSQGWLT*PEMLNS
Trigger: ACTATTCAACATCTCTGGCCATGTCAACCACCCTTG...CGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCCTCCCTCCACCGGGCTaGCATTTAGCGGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRLPPPG*HLAVAV
Trigger: GACAGCCACCGCTAAATGCCAGCCCGGTGGAGGGAG...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR TCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCTGTCGTGTCGCCGCTaGAACGCACAGATACCCGCG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGLSCRR*NAQIPA
Trigger: CGCGGGTATCTGTGCGTTTCAGCGGCGACACGACAG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR TCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCTGTCGTGTCGCCGCTaGAACGCACAGATACCCGCG +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARLSCRR*NAQIPA
Trigger: CGCGGGTATCTGTGCGTTTCAGCGGCGACACGACAG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR TCA 90 bp ACTCAGGGAACCTTTCAGCCTCCAGTCATGGCGGCCGTACAGGTTGGTGAAAATAGGACGTGTCGCCGCTaGAACGCACAGATACCCGCG +
Preference number: 4 (lower is better)
Translates to: TQGTFQPPVMAAVQVGENRTCRR*NAQIPA
Trigger: CGCGGGTATCTGTGCGTTTCAGCGGCGACACGTCCT...ATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGCTGAAAGGTTCCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGAGGCGGGGCTTGCCCTaGTTGCCCTCAATGGACTCG +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVRRGLP*LPSMDS
Trigger: CGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCGCCT...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTAGGCGGGGCTTGCCCTaGTTGCCCTCAATGGACTCG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGRRGLP*LPSMDS
Trigger: CGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCGCCT...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCTTCAGGCGGGGCTTaGCCTGCTTGCCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGASGGA*PACPQW
Trigger: CCATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGC...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGCTTCAGGCGGGGCTTaGCCTGCTTGCCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVASGGA*PACPQW
Trigger: CCATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCTTCAGGCGGGGCTTaGCCTGCTTGCCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQASGGA*PACPQW
Trigger: CCATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGC...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCTTCAGGCGGGGCTTaGCCTGCTTGCCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTASGGA*PACPQW
Trigger: CCATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGC...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GATGGCTTTCACGATGTCCGTCGAGCGGTCCATGACGATCACCGCAGCTGTGCCCTGAGTTGCGTTCTCTaGCAAAGCCAGCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: DGFHDVRRAVHDDHRSCALSCVL*QSQQTR
Trigger: CCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAG...GGCACAGCTGCGGTGATCGTCATGGACCGCTCGACGGACATCGTGAAAGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp GATGGCTTTCACGATGTCCGTCGAGCGGTCCATGACGATCACCGCAGCTGTGCCGTTTGGTGCCTGAGTTaGGTTCTCTGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DGFHDVRRAVHDDHRSCAVWCLS*VLCQSQ
Trigger: CTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAAC...GGCACAGCTGCGGTGATCGTCATGGACCGCTCGACGGACATCGTGAAAGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVRPVCA*TSASKS
Trigger: GGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCT...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTTGCTGATCTCAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GPVTQSTNRMAFYLLADLRPVCA*TSASKS
Trigger: GGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCT...GAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR GCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAA +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGAQACL*LHQRIE
Trigger: TTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGC...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAA +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQAQACL*LHQRIE
Trigger: TTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGC...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAA +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGAQACL*LHQRIE
Trigger: TTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCGATCACCGCAGCTGTaGCCAGGCCTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQRSPQL*PGLSVP
Trigger: AGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCG...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGATGCTGGGCAAACCGCTaGATCCGCTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGCWANR*IRSSSS
Trigger: GGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCTGCTGGGCAAACCGCTaGATCCGCTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGCWANR*IRSSSS
Trigger: GGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTTGCTGGGCAAACCGCTaGATCCGCTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGCWANR*IRSSSS
Trigger: GGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGTGCTGGGCAAACCGCTaGATCCGCTCCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQCWANR*IRSSSS
Trigger: GGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAGCA...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCACCCCGGGCGTCCGTGTaGTCGAGGAAGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: WRVGSTRFIVQHSTWIDAPRASV*SRKDCR
Trigger: TCTGCAATCCTTCCTCGAGCACACGGACGCCCGGGG...TGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR GCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCGCACCGGTATCGCTaGGCCCCTTCAACTTCGCCA +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGAHRYR*APSTSP
Trigger: TGGCGAAGTTGAAGGGGCGCAGCGATACCGGTGCGC...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTTGAGGCCAGTGGGGAAGTTCAGCCTCCAGTCATaGCGGCCGTACAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GLPSEGLFMKLHLRPVGKFSLQS*RPYRLV
Trigger: CACCAACCTGTACGGCCGCCATGACTGGAGGCTGAA...CTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVHGGRL*GTLPLS
Trigger: AGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTG...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGCACACCCTCACGGCATaGGGTACACTGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVHTLTA*GTLATA
Trigger: AGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTG...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTGGGCAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGAGAGCACAAATCGTATaGCCTTCTATCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGKPLHPLLELRPKVADQRAQIV*PSICLL
Trigger: CAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCT...CTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CCA 90 bp TGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGACAGCAGGCCAGGGTaGTGGGCTAAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WRVGSTRFIVQHSTWIDADSRPG*WAKRQP
Trigger: AGGCTGCCTCTTAGCCCACCACCCTGGCCTGCTGTC...TGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGGACAGCAGGCCAGGGTaGTGGGCTAAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQDSRPG*WAKRQP
Trigger: AGGCTGCCTCTTAGCCCACCACCCTGGCCTGCTGTC...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGACAGCAGGCCAGGGTaGTGGGCTAAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVDSRPG*WAKRQP
Trigger: AGGCTGCCTCTTAGCCCACCACCCTGGCCTGCTGTC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGACAGCAGGCCAGGGTaGTGGGCTAAGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGDSRPG*WAKRQP
Trigger: AGGCTGCCTCTTAGCCCACCACCCTGGCCTGCTGTC...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp ACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCGCTTATAGAACTCAATaGGGCGGGCGATGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TGQAAPSPRAQIVWPSICAYRTQ*GGRWLS
Trigger: TGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGC...GCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGCGGCTCCCCCTCGTCTaGGTTCACCACCAGATACTT +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRRLPLV*VHHQIL
Trigger: AAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCG...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCGATTGTGGGGGACACTaGCACTGTCTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRDCGGH*HCLHVG
Trigger: GCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATC...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR GCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGATTGTGGGGGACACTaGCACTGTCTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVDCGGH*HCLHVG
Trigger: GCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATC...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQRPVCA*TSASKS
Trigger: GGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCT...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTARPVCA*TSASKS
Trigger: GGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQARPVCA*TSASKS
Trigger: GGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCT...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQRPVCA*TSASKS
Trigger: GGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCT...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCCACACACAGACAGCATaGTTCTCAATCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NRCIRSSSSGRKWRIRPCHTQTA*FSISSF
Trigger: GAAAGAACTGATTGAGAAGCATGCTGTCTGTGTGTG...GCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGTTCAGCCTCCAGTCATaGCGGCCGTACAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRFSLQS*RPYRLV
Trigger: CACCAACCTGTACGGCCGCCATGACTGGAGGCTGAA...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQHGGRL*GTLPLS
Trigger: AGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQHGGRL*GTLPLS
Trigger: AGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTG...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGHGGRL*GTLPLS
Trigger: AGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCACACCCTCACGGCATaGGGTACACTGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGHTLTA*GTLATA
Trigger: AGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCACACCCTCACGGCATaGGGTACACTGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGHTLTA*GTLATA
Trigger: AGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCACACCCTCACGGCATaGGGTACACTGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARHTLTA*GTLATA
Trigger: AGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACACCCTCACGGCATaGGGTACACTGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQHTLTA*GTLATA
Trigger: AGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTG...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTSSGRK*RIRPCT
Trigger: TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCT...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTASSGRK*RIRPCT
Trigger: TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGSSGRK*RIRPCT
Trigger: TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCT...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGSSGRK*RIRPCT
Trigger: TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCT...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGAGCTCCGGCCGAAAGTaGCGGATCAGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQSSGRK*RIRPCT
Trigger: TGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCT...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCGGCAGCTGGAGGGTaGGCAGCACTCGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAAAAGG*AALALL
Trigger: CAATAAAGCGAGTGCTGCCCACCCTCCAGCTGCCGC...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
3UTR CAA 72 bp TCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAGTCGATCTCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SPRAQIVWPSIC*LISHRESISAG
Trigger: GCCGGCCGAGATCGACTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
3UTR CAA 72 bp CCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTaGTCTTGTACCAGTCACCTCGACTCAGGGAACCTT +
Preference number: 4 (lower is better)
Translates to: PGSSRAPSAGSP*SCTSHLDSGNL
Trigger: AAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR TCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCCTCAATGGACTCGATaGGCGCTGTCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQPQWTR*ALSPLH
Trigger: GTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACCTCAATGGACTCGATaGGCGCTGTCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAPQWTR*ALSPLH
Trigger: GTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGG...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCCTCAATGGACTCGATaGGCGCTGTCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQPQWTR*ALSPLH
Trigger: GTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCCTCAATGGACTCGATaGGCGCTGTCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVPQWTR*ALSPLH
Trigger: GTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCCTCAATGGACTCGATaGGCGCTGTCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAPQWTR*ALSPLH
Trigger: GTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTCATGGCCAGAGATGTTaGATAGTTTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QARRPRHPEHKSYGLLSAHGQRC*IVWCLS
Trigger: ACTCAGGCACCAAACTATTCAACATCTCTGGCCATG...AGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCGGCTCCCCCTCGTCTaGGTTCACCACCAGATACTT +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARRLPLV*VHHQIL
Trigger: AAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACGGCTCCCCCTCGTCTaGGTTCACCACCAGATACTT +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTRLPLV*VHHQIL
Trigger: AAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCGGCTCCCCCTCGTCTaGGTTCACCACCAGATACTT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGRLPLV*VHHQIL
Trigger: AAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCGGCTCCCCCTCGTCTaGGTTCACCACCAGATACTT +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGRLPLV*VHHQIL
Trigger: AAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGTCTCGGATGGCCACCTaGAGATTGGAGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRSRMAT*RLEASL
Trigger: CAATGAGGCCTCCAATCTGCAGGTGGCCATCCGAGA...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGATTGTGGGGGACACTaGCACTGTCTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQDCGGH*HCLHVG
Trigger: GCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATC...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGATTGTGGGGGACACTaGCACTGTCTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTADCGGH*HCLHVG
Trigger: GCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATC...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGATTGTGGGGGACACTaGCACTGTCTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVDCGGH*HCLHVG
Trigger: GCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCATCGCATGTCGCCTTCTaGTGGGTCCTGGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: WRVGSTRFIVQHSTWIDASHVAF*WVLVCS
Trigger: GGAACACACCAGGACCCAGCAGAAGGCGACATGCGA...TGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTTCAGCCTCCAGTCATaGCGGCCGTACAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGFSLQS*RPYRLV
Trigger: CACCAACCTGTACGGCCGCCATGACTGGAGGCTGAA...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGTTCAGCCTCCAGTCATaGCGGCCGTACAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQFSLQS*RPYRLV
Trigger: CACCAACCTGTACGGCCGCCATGACTGGAGGCTGAA...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGTTCAGCCTCCAGTCATaGCGGCCGTACAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVFSLQS*RPYRLV
Trigger: CACCAACCTGTACGGCCGCCATGACTGGAGGCTGAA...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCTCACCACCAGATACTTaGGCCTGCCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRSPPDT*ACHLRA
Trigger: AGCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGA...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCATAGGCCTCTCGGATaGCCACCTGCAGATTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQHRPLG*PPADWR
Trigger: CCTCCAATCTGCAGGTGGCCATCCGAGAGGCCTATG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCATAGGCCTCTCGGATaGCCACCTGCAGATTGGAGG +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGHRPLG*PPADWR
Trigger: CCTCCAATCTGCAGGTGGCCATCCGAGAGGCCTATG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCATAGGCCTCTCGGATaGCCACCTGCAGATTGGAGG +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVHRPLG*PPADWR
Trigger: CCTCCAATCTGCAGGTGGCCATCCGAGAGGCCTATG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCGTTGGCCACAGTTGTaGGGCAGCCAAACACTCCCA +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQARWPQL*GSQTLP
Trigger: TGGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACGTTGGCCACAGTTGTaGGGCAGCCAAACACTCCCA +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGRWPQL*GSQTLP
Trigger: TGGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACG...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCGTTGGCCACAGTTGTaGGGCAGCCAAACACTCCCA +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQRWPQL*GSQTLP
Trigger: TGGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACGGCATGGGGTACACTaGCCACAGCTCTCGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTARHGVH*PQLSCL
Trigger: TAAGCACGAGAGCTGTGGCCAGTGTACCCCATGCCG...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCGGCATGGGGTACACTaGCCACAGCTCTCGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQRHGVH*PQLSCL
Trigger: TAAGCACGAGAGCTGTGGCCAGTGTACCCCATGCCG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCGGCATGGGGTACACTaGCCACAGCTCTCGTGCTTA +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARRHGVH*PQLSCL
Trigger: TAAGCACGAGAGCTGTGGCCAGTGTACCCCATGCCG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACGGCATGGGGTACACTaGCCACAGCTCTCGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTRHGVH*PQLSCL
Trigger: TAAGCACGAGAGCTGTGGCCAGTGTACCCCATGCCG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCGGCATGGGGTACACTaGCCACAGCTCTCGTGCTTA +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQRHGVH*PQLSCL
Trigger: TAAGCACGAGAGCTGTGGCCAGTGTACCCCATGCCG...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
3UTR CAA 72 bp ATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTCAGGGAACCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: IQSGPFSRISFV*YQSPRLREPFS
Trigger: GCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR TCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRGRTGW*KSGLHP
Trigger: AGGATGAAGACCGGATTTTCACCAACCTGTACGGCC...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR TCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGTCAAACCCGATGTCTTaGTCTCGCCCAGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVSNPMS*SRPGSS
Trigger: ACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGA...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCTCTCGGATGGCCACCTaGAGATTGGAGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGSRMAT*RLEASL
Trigger: CAATGAGGCCTCCAATCTGCAGGTGGCCATCCGAGA...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTCTCGGATGGCCACCTaGAGATTGGAGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQASRMAT*RLEASL
Trigger: CAATGAGGCCTCCAATCTGCAGGTGGCCATCCGAGA...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGTCTCGGATGGCCACCTaGAGATTGGAGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQSRMAT*RLEASL
Trigger: CAATGAGGCCTCCAATCTGCAGGTGGCCATCCGAGA...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACATCTCGGATGGCCACCTaGAGATTGGAGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTSRMAT*RLEASL
Trigger: CAATGAGGCCTCCAATCTGCAGGTGGCCATCCGAGA...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGCTTGCCAATCAGACCTaGCTCATAGGCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRLANQT*LIGLSD
Trigger: ATCCGAGAGGCCTATGAGGCAGGTCTGATTGGCAAG...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTTTGGTGCCTGAGTTaGGTTCTCTGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVVWCLS*VLCQSQ
Trigger: CTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAAC...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCCCCCCTCACGAAACGTaGCATCACCTTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRPPHET*HHLVHP
Trigger: TGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR GCA 90 bp ACGGCATGGGGTACACTGGCCACAGCTCTCGTGCTTATAGAACTCAATGAGGCGCCCCCTCACGAAACGTaGCATCACCTTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: TAWGTLATALVLIELNEAPPHET*HHLVHP
Trigger: TGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG...CGCCTCATTGAGTTCTATAAGCACGAGAGCTGTGGCCAGTGTACCCCATGCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTCACCACCAGATACTTaGGCCTGCCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGSPPDT*ACHLRA
Trigger: AGCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGA...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGTCACCACCAGATACTTaGGCCTGCCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVSPPDT*ACHLRA
Trigger: AGCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGA...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCTCACCACCAGATACTTaGGCCTGCCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGSPPDT*ACHLRA
Trigger: AGCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGA...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCTCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRSTVQG*LTWPEM
Trigger: CATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGTCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVSTVQG*LTWPEM
Trigger: CATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCGTCCAGCATTCCACATaGATAGACGCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRVQHST*IDAGQQ
Trigger: CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGAC...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGATAGAGACGCTAGGTaGCGCGCAGGAAAGACGTCA +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGDRDAR*RAGKTS
Trigger: TGACGTCTTTCCTGCGCGCCACCTAGCGTCTCTATC...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGATAGAGACGCTAGGTaGCGCGCAGGAAAGACGTCA +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGDRDAR*RAGKTS
Trigger: TGACGTCTTTCCTGCGCGCCACCTAGCGTCTCTATC...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCACATGTCGCCTTCTGCTaGGTCCTGGTGTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: WRVGSTRFIVQHSTWIDAHVAFC*VLVCST
Trigger: AGTGGAACACACCAGGACCCAGCAGAAGGCGACATG...TGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR TCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARGRTGW*KSGLHP
Trigger: AGGATGAAGACCGGATTTTCACCAACCTGTACGGCC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQGRTGW*KSGLHP
Trigger: AGGATGAAGACCGGATTTTCACCAACCTGTACGGCC...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR TCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVGRTGW*KSGLHP
Trigger: AGGATGAAGACCGGATTTTCACCAACCTGTACGGCC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTTCAAACCCGATGTCTTaGTCTCGCCCAGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGSNPMS*SRPGSS
Trigger: ACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGA...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTCAAACCCGATGTCTTaGTCTCGCCCAGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGSNPMS*SRPGSS
Trigger: ACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGA...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGTCAAACCCGATGTCTTaGTCTCGCCCAGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQSNPMS*SRPGSS
Trigger: ACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGA...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACTTGGGCCTGCCATCTaGGGGCTTATTCATGAAGCT +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTALGPAI*GLIHEA
Trigger: AGCTTCATGAATAAGCCCTCAGATGGCAGGCCCAAG...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCTTGGGCCTGCCATCTaGGGGCTTATTCATGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGLGPAI*GLIHEA
Trigger: AGCTTCATGAATAAGCCCTCAGATGGCAGGCCCAAG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCTTGGGCCTGCCATCTaGGGGCTTATTCATGAAGCT +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQLGPAI*GLIHEA
Trigger: AGCTTCATGAATAAGCCCTCAGATGGCAGGCCCAAG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCCTTCCAGCAGCTTGTaGGGATCATGGCGTAAGATC +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGPSSSL*GSWRKI
Trigger: GATCTTACGCCATGATCCTCACAAGCTGCTGGAAGG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACCTTCCAGCAGCTTGTaGGGATCATGGCGTAAGATC +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGPSSSL*GSWRKI
Trigger: GATCTTACGCCATGATCCTCACAAGCTGCTGGAAGG...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCCTTCCAGCAGCTTGTaGGGATCATGGCGTAAGATC +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVPSSSL*GSWRKI
Trigger: GATCTTACGCCATGATCCTCACAAGCTGCTGGAAGG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCCTTCCAGCAGCTTGTaGGGATCATGGCGTAAGATC +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARPSSSL*GSWRKI
Trigger: GATCTTACGCCATGATCCTCACAAGCTGCTGGAAGG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCCTTCCAGCAGCTTGTaGGGATCATGGCGTAAGATC +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQPSSSL*GSWRKI
Trigger: GATCTTACGCCATGATCCTCACAAGCTGCTGGAAGG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGCCAGATACTTGGGCCTaGCATCTGAGGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVPDTWA*HLRAYS
Trigger: TGAATAAGCCCTCAGATGGCAGGCCCAAGTATCTGG...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTTGCCAATCAGACCTaGCTCATAGGCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGLANQT*LIGLSD
Trigger: ATCCGAGAGGCCTATGAGGCAGGTCTGATTGGCAAG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCTTGCCAATCAGACCTaGCTCATAGGCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQLANQT*LIGLSD
Trigger: ATCCGAGAGGCCTATGAGGCAGGTCTGATTGGCAAG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCTTGCCAATCAGACCTaGCTCATAGGCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVLANQT*LIGLSD
Trigger: ATCCGAGAGGCCTATGAGGCAGGTCTGATTGGCAAG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCTGAGTTGCGTTCTCTaGCAAAGCCAGCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGLSCVL*QSQQTR
Trigger: CCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCTGAGTTGCGTTCTCTaGCAAAGCCAGCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARLSCVL*QSQQTR
Trigger: CCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCTGAGTTGCGTTCTCTaGCAAAGCCAGCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGLSCVL*QSQQTR
Trigger: CCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTGAGTTGCGTTCTCTaGCAAAGCCAGCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGLSCVL*QSQQTR
Trigger: CCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACTGAGTTGCGTTCTCTaGCAAAGCCAGCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTLSCVL*QSQQTR
Trigger: CCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCTGAGTTGCGTTCTCTaGCAAAGCCAGCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQLSCVL*QSQQTR
Trigger: CCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGTTTGGTGCCTGAGTTaGGTTCTCTGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGVWCLS*VLCQSQ
Trigger: CTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAAC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTTGGTGCCTGAGTTaGGTTCTCTGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARVWCLS*VLCQSQ
Trigger: CTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAAC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGTTTGGTGCCTGAGTTaGGTTCTCTGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQVWCLS*VLCQSQ
Trigger: CTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAAC...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGTTTGGTGCCTGAGTTaGGTTCTCTGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTVWCLS*VLCQSQ
Trigger: CTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAAC...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGTTTGGTGCCTGAGTTaGGTTCTCTGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQVWCLS*VLCQSQ
Trigger: CTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAAC...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCCCCTCACGAAACGTaGCATCACCTTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGPPHET*HHLVHP
Trigger: TGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCCCCCTCACGAAACGTaGCATCACCTTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAPPHET*HHLVHP
Trigger: TGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACCCCCTCACGAAACGTaGCATCACCTTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTPPHET*HHLVHP
Trigger: TGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCCCCCTCACGAAACGTaGCATCACCTTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARPPHET*HHLVHP
Trigger: TGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGAATTATTCTGCCCAGTaGGAGCCCTGCCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVNYSAQ*EPCQTV
Trigger: CACAGTCTGGCAGGGCTCGCACTGGGCAGAATAATT...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR GCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAACGTTGCAATTATTCTaGCCAGTGCGAGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTATLQLF*PVRALP
Trigger: TGGCAGGGCTCGCACTGGGCAGAATAATTGCAACGT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGTGTGCACCTGCGGTATaGATCGGTGTATCATGGGAG +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQCAPAV*IGVSWE
Trigger: CTCCCATGATACACCGATGCATACCGCAGGTGCACA...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTATTCGGCGTTTAGTGTaGACCTGCGGTATGCATCGG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGIRRLV*TCGMHR
Trigger: CCGATGCATACCGCAGGTGCACACTAAACGCCGAAT...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAAATGAGGTTTTCTTaGGTGCTGTCGTGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGQMRFS*VLSCRR
Trigger: GCGGCGACACGACAGCACCCAAGAAAACCTCATTTG...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CCA 90 bp TGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCACAAATGAGGTTTTCTTaGGTGCTGTCGTGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: WRVGSTRFIVQHSTWIDAQMRFS*VLSCRR
Trigger: GCGGCGACACGACAGCACCCAAGAAAACCTCATTTG...TGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQSTVQG*LTWPEM
Trigger: CATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCATCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTASTVQG*LTWPEM
Trigger: CATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGTCCAGCATTCCACATaGATAGACGCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGVQHST*IDAGQQ
Trigger: CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGAC...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGTCCAGCATTCCACATaGATAGACGCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGVQHST*IDAGQQ
Trigger: CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGAC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTCCAGCATTCCACATaGATAGACGCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAVQHST*IDAGQQ
Trigger: CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGAC...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGGTCCAGCATTCCACATaGATAGACGCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQVQHST*IDAGQQ
Trigger: CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGAC...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCAAATGAGGTTTTCTTaGGTGCTGTCCGCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVQMRFS*VLSARE
Trigger: TTCCCGCGCGGACAGCACCCAAGAAAACCTCATTTG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529927.5
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGTGGTGGAGCTGGACTaGAATCTAGGCCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGVVELD*NLGLSS
Trigger: GGAAGAAAGGCCTAGATTCCAGTCCAGCTCCACCAC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCTTCCCAGGAGGTCTTaGAAGCCTGATGAACTCGTC +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGLPRRS*KPDELV
Trigger: GACGAGTTCATCAGGCTTCCAAGACCTCCTGGGAAG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR TCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVLQRAK*GFLGCC
Trigger: ACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGLQRAK*GFLGCC
Trigger: ACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTALQRAK*GFLGCC
Trigger: ACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAG...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR TCA 90 bp ATCTCCTTTGTCTTGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCCTCCAGCTTGGGCCTGCCATCTaGGGGCTTATTCATGAAGCT +
Preference number: 4 (lower is better)
Translates to: ISFVLYQSPRLREPFSLQLGPAI*GLIHEA
Trigger: AGCTTCATGAATAAGCCCTCAGATGGCAGGCCCAAG...CTGGAGGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR TCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCCATGGCCAGAGATGTTaGATAGTTTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRHGQRC*IVWCLS
Trigger: ACTCAGGCACCAAACTATTCAACATCTCTGGCCATG...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR TCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGCTTATAGAACTCAATaGGGCGGGCGATGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVAYRTQ*GGRWLS
Trigger: TGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCTTATAGAACTCAATaGGGCGGGCGATGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAAYRTQ*GGRWLS
Trigger: TGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGC...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCTTATAGAACTCAATaGGGCGGGCGATGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGAYRTQ*GGRWLS
Trigger: TGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGC...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCTTCCAGTCCTCATGGTaGGGAACCATCTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRFQSSW*GTISVL
Trigger: AAGAACAGAGATGGTTCCTCACCATGAGGACTGGAA...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR GCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACCAGATACTTGGGCCTaGCATCTGAGGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGPDTWA*HLRAYS
Trigger: TGAATAAGCCCTCAGATGGCAGGCCCAAGTATCTGG...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCCAGATACTTGGGCCTaGCATCTGAGGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARPDTWA*HLRAYS
Trigger: TGAATAAGCCCTCAGATGGCAGGCCCAAGTATCTGG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCCAGATACTTGGGCCTaGCATCTGAGGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGPDTWA*HLRAYS
Trigger: TGAATAAGCCCTCAGATGGCAGGCCCAAGTATCTGG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGTATGGCCTTCTATCTaGTTGCTGATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQVWPSI*LLISHR
Trigger: CCTGTGGGAGATCAGCAAGCAGATAGAAGGCCATAC...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTTTCCTGGAACCCTCTaGTGTGGTCCTCGTGATAAG +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGFPGTL*CGPRDK
Trigger: CTTATCACGAGGACCACAGCAGAGGGTTCCAGGAAA...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR GCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCGTTTAGTGTGCACCTaGGGTATGCATCGGTGTATC +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQRLVCT*GMHRCI
Trigger: GATACACCGATGCATACCGCAGGTGCACACTAAACG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGCCTTCTGCTGGGTCCTaGTGTGTTCCACTTTCTATA +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRPSAGS*CVPLSI
Trigger: TATAGAAAGTGGAACACACCAGGACCCAGCAGAAGG...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR TCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCATGGCCAGAGATGTTaGATAGTTTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGHGQRC*IVWCLS
Trigger: ACTCAGGCACCAAACTATTCAACATCTCTGGCCATG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCATGGCCAGAGATGTTaGATAGTTTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQHGQRC*IVWCLS
Trigger: ACTCAGGCACCAAACTATTCAACATCTCTGGCCATG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACATGGCCAGAGATGTTaGATAGTTTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAHGQRC*IVWCLS
Trigger: ACTCAGGCACCAAACTATTCAACATCTCTGGCCATG...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR TCA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCATGGCCAGAGATGTTaGATAGTTTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVHGQRC*IVWCLS
Trigger: ACTCAGGCACCAAACTATTCAACATCTCTGGCCATG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCGTGACACCCCCAGCATaGTTCTCAATCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAVTPPA*FSISSF
Trigger: GAAAGAACTGATTGAGAAGCATGCTGGGGGTGTCAC...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTGACACCCCCAGCATaGTTCTCAATCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAVTPPA*FSISSF
Trigger: GAAAGAACTGATTGAGAAGCATGCTGGGGGTGTCAC...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGTGACACCCCCAGCATaGTTCTCAATCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQVTPPA*FSISSF
Trigger: GAAAGAACTGATTGAGAAGCATGCTGGGGGTGTCAC...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGACACCCCCAGCATaGTTCTCAATCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARVTPPA*FSISSF
Trigger: GAAAGAACTGATTGAGAAGCATGCTGGGGGTGTCAC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGTGACACCCCCAGCATaGTTCTCAATCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGVTPPA*FSISSF
Trigger: GAAAGAACTGATTGAGAAGCATGCTGGGGGTGTCAC...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACATGGCCACCTGCAGATTaGAGGCCTCATTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTWPPAD*RPHCRI
Trigger: AATTCTACAATGAGGCCTCCAATCTGCAGGTGGCCA...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTGGCCACCTGCAGATTaGAGGCCTCATTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQWPPAD*RPHCRI
Trigger: AATTCTACAATGAGGCCTCCAATCTGCAGGTGGCCA...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCTGGCCACCTGCAGATTaGAGGCCTCATTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGWPPAD*RPHCRI
Trigger: AATTCTACAATGAGGCCTCCAATCTGCAGGTGGCCA...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGATGGCCACCTGCAGATTaGAGGCCTCATTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGWPPAD*RPHCRI
Trigger: AATTCTACAATGAGGCCTCCAATCTGCAGGTGGCCA...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp TGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCATCTTTTTCAGTTTCCTaGAACCCTCTGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: WRVGSTRFIVQHSTWIDASFSVS*NPLLWS
Trigger: GGACCACAGCAGAGGGTTCCAGGAAACTGAAAAAGA...TGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR TCA 90 bp GTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTTGCTGATCTCCCACAGCATGGCCAGAGATGTTaGATAGTTTGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VTQSTNRMAFYLLADLPQHGQRC*IVWCLS
Trigger: ACTCAGGCACCAAACTATTCAACATCTCTGGCCATG...CTGTGGGAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR TCA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGATAGCCCGATCCTCATaGCTACGTTGCAATTATTCT +
Preference number: 4 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRIARSS*LRCNYS
Trigger: AGAATAATTGCAACGTAGTCATGAGGATCGGGCTAT...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CCA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARQGWLT*PEMLNS
Trigger: ACTATTCAACATCTCTGGCCATGTCAACCACCCTTG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGQGWLT*PEMLNS
Trigger: ACTATTCAACATCTCTGGCCATGTCAACCACCCTTG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAQGWLT*PEMLNS
Trigger: ACTATTCAACATCTCTGGCCATGTCAACCACCCTTG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQQGWLT*PEMLNS
Trigger: ACTATTCAACATCTCTGGCCATGTCAACCACCCTTG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGQGWLT*PEMLNS
Trigger: ACTATTCAACATCTCTGGCCATGTCAACCACCCTTG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGAGAGCACAAATCGTATaGCCTTCTATCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQRAQIV*PSICLL
Trigger: CAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCT...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAAGAGCACAAATCGTATaGCCTTCTATCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTRAQIV*PSICLL
Trigger: CAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCT...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGAGAGCACAAATCGTATaGCCTTCTATCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQRAQIV*PSICLL
Trigger: CAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCT...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTAGAGCACAAATCGTATaGCCTTCTATCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGRAQIV*PSICLL
Trigger: CAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCT...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAAGAGCACAAATCGTATaGCCTTCTATCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTARAQIV*PSICLL
Trigger: CAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CCA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGAGAGCACAAATCGTATaGCCTTCTATCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQRAQIV*PSICLL
Trigger: CAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCT...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR GCA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGATCTCTCTAAAACGTaGTGTTTACAAAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTADLSKT*CLQNSF
Trigger: AAAGGAGTTTTGTAAACAGCACGTTTTAGAGAGATC...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS GCA 90 bp GGGTGCTGTCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCAGATGGGTCACCTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: GCCPRGKRPAEQPPC*QHRGGPDGSPHAVT
Trigger: GGTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGACAGCACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529927.5
CDS GCA 90 bp GAGAAGGGCTCTCCAGAGGCCACTACAGACCCCAGGGACTGCTCGTaGACGGGCGCGGCCGCGACACCCGGCCCCAAACACCCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: EKGSPEATTDPRDCS*TGAAATPGPKHPWP
Trigger: GGGCCACGGGTGTTTGGGGCCGGGTGTCGCGGCCGCGCCCGTGCACGAGCAGTCCCTGGGGTCTGTAGTGGCCTCTGGAGAGCCCTTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530014.5
ENST00000532260.1
CDS GCA 90 bp TCTTGGGTGCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCAGATGGGTCACCTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: SWVPRGKRPAEQPPC*QHRGGPDGSPHAVT
Trigger: GGTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGCACCCAAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532343.5
CDS GCA 90 bp CACAGATACCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCAGATGGGTCACCTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: HRYPRGKRPAEQPPC*QHRGGPDGSPHAVT
Trigger: GGTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGGTATCTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000322776.11
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000526138.5
ENST00000528328.1
ENST00000528548.5
ENST00000529867.5
ENST00000530014.5
ENST00000530103.5
ENST00000530638.1
ENST00000532244.5
ENST00000532260.1
ENST00000532303.5
ENST00000533075.5
ENST00000534139.5
ENST00000647561.1
CDS GCA 90 bp TGTAGATACCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCAGATGGGTCACCTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: CRYPRGKRPAEQPPC*QHRGGPDGSPHAVT
Trigger: GGTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGGTATCTACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415352.6
CDS-3UTR CAA 90 bp GGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTGGGCCTGCCATCTGAGGGCAAGATCTCCCGGTCCTaGCAGGTGCCCGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GSPSSAFTTRYLGLPSEGKISRS*QVPGSP
Trigger: GGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTT...GCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CAA 90 bp TGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGGCCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTG +
Preference number: 5 (lower is better)
Translates to: CIRSSSSGRKWRIRPCTGLHGGR*WGTLPL
Trigger: CAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAG...GCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CAA 90 bp GCAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTG +
Preference number: 5 (lower is better)
Translates to: ANRCIRSSSSGRKWRIRPLHGGR*WGTLPL
Trigger: CAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAG...GGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS GCA 90 bp CAGGAGGAGGGACAGCAGGCGGCCCTGGGGGAGCCTGTGTGTTGTTaGCAGCCTACTCTCTATCTGGCCCCAGCCGGGAAGCCACTCAGA +
Preference number: 5 (lower is better)
Translates to: QEEGQQAALGEPVCC*QPTLYLAPAGKPLR
Trigger: TCTGAGTGGCTTCCCGGCTGGGGCCAGATAGAGAGTAGGCTGGCAACAACACACAGGCTCCCCCAGGGCCGCCTGCTGTCCCTCCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CCA 90 bp TTCATAGCACTGAGGCTGAGGAACTGGCGCGATAGAGACGCTAGGTaGCGCGCAGGAAAGACGTCACGCGCCCGACGCCAGCGCCGCGCA +
Preference number: 5 (lower is better)
Translates to: FIALRLRNWRDRDAR*RAGKTSRARRQRRA
Trigger: TGCGCGGCGCTGGCGTCGGGCGCGTGACGTCTTTCCTGCGCGCCACCTAGCGTCTCTATCGCGCCAGTTCCTCAGCCTCAGTGCTATGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CAA 90 bp AACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: NRCIRSSSSGRKWRIRPCATVST*ATVVGQ
Trigger: CTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGC...GCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS CCA 90 bp ACCAGCCGAGCAGCCGCCGTGTTGCCAGCATCGCGGCGGGCCAGATaGGTCACCTCACGCTGTCACCTTCATAGCACTGAGGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: TSRAAAVLPASRRAR*VTSRCHLHSTEAEE
Trigger: TTCCTCAGCCTCAGTGCTATGAAGGTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000528328.1
ENST00000529927.5
ENST00000532244.5
ENST00000532303.5
ENST00000532343.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGTGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: APRAPAESGGSDPAQARRWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...CCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS TCA 90 bp TCCAAAGGGAGCCTAGCCAGATCCCGGGTGTCACAGGACACAGTCTaGCCCAGGGTTACGCCAGGCCTTACCCACGTCTGCGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SKGSLARSRVSQDTV*PRVTPGLTHVCGEG
Trigger: CCCTTCCCCGCAGACGTGGGTAAGGCCTGGCGTAACCCTGGGTCAGACTGTGTCCTGTGACACCCGGGATCTGGCTAGGCTCCCTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS GCA 90 bp CGAGCGGTCCATGACGATCACCGCAGCTGTGCCCAGGCCTGTCTGTaGCTGCACCAGCGCATCGAAGTCCATCAGCACCGTCTCACACAC +
Preference number: 5 (lower is better)
Translates to: RAVHDDHRSCAQACL*LHQRIEVHQHRLTH
Trigger: GTGTGTGAGACGGTGCTGATGGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCGTCATGGACCGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000527923.1
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARRAAAV*PASRRA
Trigger: GGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGRAAAV*PASRRA
Trigger: GGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQRAAAV*PASRRA
Trigger: GGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GCAGGATCTCCTTTGTCTTGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCCCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: AGSPLSCTSHLDSGNLSARAAAV*PASRRA
Trigger: GGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCG...GGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CAA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGRAAAV*PASRRA
Trigger: GGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCG...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: APRAPAESGGSDPAQARRTVQGW*TWPEML
Trigger: CAACATCTCTGGCCATGTCAACCACCCTTGCACTGT...CCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CAA 90 bp CGAAAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCAGTCTCACACACAGACTaGGGGATCAGTGGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: RKWRIRPCTGQAAPSPRAVSHTD*GISGVD
Trigger: GTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGAC...TGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS GCA 90 bp CGGTCCATGACGATCACCGCAGCTGTGCCCAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCCATCAGCACCGTCTCACACACAGAC +
Preference number: 5 (lower is better)
Translates to: RSMTITAAVPRPVCA*TSASKSISTVSHTD
Trigger: GTCTGTGTGTGAGACGGTGCTGATGGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCGTCATGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000527923.1
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 90 bp CTCTGCCAAAGCCAGCAAACCAGGTACCTCCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCTCCACGTTGGCCACAGTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LCQSQQTRYLHGGRL*GTLPLSPRWPQLWG
Trigger: GCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAGGTACCTGGTTTGCTGGCTTTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 90 bp GACTACGTTGCAATTATTCTGCCCAGTGCGAGCCCTGCCAGACTGTaGGCTTCCCCACCCCGGGCGTCCGTGTGCTCGAGGAAGGATTGC +
Preference number: 5 (lower is better)
Translates to: DYVAIILPSASPARL*ASPPRASVCSRKDC
Trigger: GCAATCCTTCCTCGAGCACACGGACGCCCGGGGTGGGGAAGCCCACAGTCTGGCAGGGCTCGCACTGGGCAGAATAATTGCAACGTAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CAA 90 bp CGTAAGATCTCCCGGTCCTTGCAGGTGCCCGGCTCCCCCTCGTCTGCGTTCACCTTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RKISRSLQVPGSPSSAFTFMKLH*RPVGKP
Trigger: TGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAA...GGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS TCA 90 bp CATTGCCTTGTTCACCCCATGCCCTTAGCCTCAGAACAGGCACTGTaGAGGTGGAGCCACAGAGCAGCACTGGTGCGGAGGGGACCGAGG +
Preference number: 5 (lower is better)
Translates to: HCLVHPMPLASEQAL*RWSHRAALVRRGPR
Trigger: CCTCGGTCCCCTCCGCACCAGTGCTGCTCTGTGGCTCCACCTTCACAGTGCCTGTTCTGAGGCTAAGGGCATGGGGTGAACAAGGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS GCA 90 bp CAGGCAGGTCATAGCCCGATCCTCATGACTACGTTGCAATTATTCTaGCCAGTGCGAGCCCTGCCAGACTGTGGGCTTCCCCACCCCGGG +
Preference number: 5 (lower is better)
Translates to: QAGHSPILMTTLQLF*PVRALPDCGLPHPG
Trigger: CCCGGGGTGGGGAAGCCCACAGTCTGGCAGGGCTCGCACTGGGCAGAATAATTGCAACGTAGTCATGAGGATCGGGCTATGACCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CCA 90 bp CTCCACGGCGGCAGATTGTGGGGGACACTGCCACTGTCTCCACGTTaGCCACAGTTGTGGGGCAGCCAAACACTCCTTCAGGGAAATGGG +
Preference number: 5 (lower is better)
Translates to: LHGGRLWGTLPLSPR*PQLWGSQTLLQGNG
Trigger: CCCATTTCCCTGAAGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CCA 90 bp GGGTCACCTCACGCTGTCACCTTCATAGCACTGAGGCTGAGGAACTaGCGCGATAGAGACGCTAGGTGGCGCGCAGGAAAGACGTCACGC +
Preference number: 5 (lower is better)
Translates to: GSPHAVTFIALRLRN*RDRDARWRAGKTSR
Trigger: GCGTGACGTCTTTCCTGCGCGCCACCTAGCGTCTCTATCGCGCCAGTTCCTCAGCCTCAGTGCTATGAAGGTGACAGCGTGAGGTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAAGATCTCCCGGTCCTaGCAGGTGCCCGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRKISRS*QVPGSP
Trigger: GGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTT...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTGGGCAAACCGCTGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGGAGCCACAAGCATTCTaGCCAATCAGACCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LGKPLHPLLELRPKVADQEPQAF*PIRPAS
Trigger: TGAGGCAGGTCTGATTGGCAAGAATGCTTGTGGCTC...CTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTTTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CAA 90 bp AAGTGGCGGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: KWRIRPCTGQAAPSPRAQSLVPE*RSLPKP
Trigger: TGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACT...TTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCCGCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS GCA 90 bp CCCCCTCACGAAACGTGCCATCACCTTGTTCATCCAGTCCACACCTaGAGCCACAGCCACAAGAGAGGGCCTGATGATCTCCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PPHETCHHLVHPVHT*SHSHKRGPDDLPSQ
Trigger: CTGGCTGGGGAGATCATCAGGCCCTCTCTTGTGGCTGTGGCTGCAGGTGTGGACTGGATGAACAAGGTGATGGCACGTTTCGTGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534352.1
CDS-3UTR CAA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGAAGATCTCCCGGTCCTaGCAGGTGCCCGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQKISRS*QVPGSP
Trigger: GGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTT...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGAAGATCTCCCGGTCCTaGCAGGTGCCCGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARKISRS*QVPGSP
Trigger: GGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTT...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAAAGATCTCCCGGTCCTaGCAGGTGCCCGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAKISRS*QVPGSP
Trigger: GGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CCTCACGAAACGTGCCATCACCTTGTTCATCCAGTCCACACCCTCACGGCATGGCGGGGCTTGCCCTGCTaGCCCTCAATGGACTCGATG +
Preference number: 5 (lower is better)
Translates to: PHETCHHLVHPVHTLTAWRGLPC*PSMDSM
Trigger: CATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCG...CCATGCCGTGAGGGTGTGGACTGGATGAACAAGGTGATGGCACGTTTCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CAA 90 bp CTCAATGAGGCGGGCGATGGCTTTCACGATGTCCGTCGAGCGGTCCATGACGATCCACGTTGGCCACAGTaGTGGGGCAGCCAAACACTC +
Preference number: 5 (lower is better)
Translates to: LNEAGDGFHDVRRAVHDDPRWPQ*WGSQTL
Trigger: GAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGG...ATCGTCATGGACCGCTCGACGGACATCGTGAAAGCCATCGCCCGCCTCATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CAA 90 bp GGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATTGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: GSDPAQARRPRHPEHKSYWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...ATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CAA 90 bp ACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCAAACGTGCCATCACCTaGTTCATCCAGTCCACACCG +
Preference number: 5 (lower is better)
Translates to: TLHRPGGPVTQSTNRMAFKRAIT*FIQSTP
Trigger: CGGTGTGGACTGGATGAACAAGGTGATGGCACGTTT...GAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS GCA 90 bp TTCAGCCACTTCAGGGCGCAGAGCAGTGGACGGGAAATCAGGAGGTaGGCATCCCTAAATGGGGCAATGACCCCTTCACGCCCTACAAGG +
Preference number: 5 (lower is better)
Translates to: FSHFRAQSSGREIRR*ASLNGAMTPSRPTR
Trigger: CCTTGTAGGGCGTGAAGGGGTCATTGCCCCATTTAGGGATGCGCACCTCCTGATTTCCCGTCCACTGCTCTGCGCCCTGAAGTGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524876.5
ENST00000526138.5
ENST00000528328.1
ENST00000528548.5
ENST00000532260.1
CDS GCA 90 bp AGCCCTGGAAGGAGGCTTTGGGAGCCAAGTCCCATTTGGGATGCATaGAGGACTGGCCACCACTCCCCCAGTTCAACCACTGACAGACCA +
Preference number: 5 (lower is better)
Translates to: SPGRRLWEPSPIWDA*RTGHHSPSSTTDRP
Trigger: TGGTCTGTCAGTGGTTGAACTGGGGGAGTGGTGGCCAGTCCTGCATGCATCCCAAATGGGACTTGGCTCCCAAAGCCTCCTTCCAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524838.5
ENST00000528377.1
CDS CCA 90 bp GGCGCAGAGCAGTGGACGGGAAATCAGGAGGTGCGCATCCCTAAATaGGGCAATGACCCCTTCACGCCCTACAAGGCTGTGACAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GAEQWTGNQEVRIPK*GNDPFTPYKAVTRR
Trigger: TCTCCTTGTCACAGCCTTGTAGGGCGTGAAGGGGTCATTGCCCCATTTAGGGATGCGCACCTCCTGATTTCCCGTCCACTGCTCTGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526138.5
ENST00000528548.5
ENST00000532260.1
CDS CCA 90 bp GGGTGCTGTCTAGGGAGACAAAGGGTCAGGAGGCCCAGAGTGCTCTaGGGCCATGAGGGATTGGGCCAGAAGCTACAGAATCTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GCCLGRQRVRRPRVL*GHEGLGQKLQNLGS
Trigger: AGACCCAAGATTCTGTAGCTTCTGGCCCAATCCCTCATGGCCCCAGAGCACTCTGGGCCTCCTGACCCTTTGTCTCCCTAGACAGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528314.1
ENST00000528377.1
CDS CCA 90 bp CGGCCCTGGGGGAGCCTGTGTGTTGTTGCCAGCCTACTCTCTATCTaGCCCCAGCCGGGAAGCCACTCAGAAATCCCTAAGAACAATCCA +
Preference number: 5 (lower is better)
Translates to: RPWGSLCVVASLLSI*PQPGSHSEIPKNNP
Trigger: TGGATTGTTCTTAGGGATTTCTGAGTGGCTTCCCGGCTGGGGCCAGATAGAGAGTAGGCTGGCAACAACACACAGGCTCCCCCAGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS-3UTR CAA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGCGGGGCTTGCCCTGCTaGCCCTCAATGGACTCGATG +
Preference number: 5 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRRGLPC*PSMDSM
Trigger: CATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCG...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGGGCTTCAGGCGGGGCTaGCCCTGCTTGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQGFRRG*PCLPSM
Trigger: CATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGCC...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGCTTCAGGCGGGGCTaGCCCTGCTTGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGGFRRG*PCLPSM
Trigger: CATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGCC...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGGCTTCAGGCGGGGCTaGCCCTGCTTGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARGFRRG*PCLPSM
Trigger: CATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGCC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGGCTTCAGGCGGGGCTaGCCCTGCTTGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVGFRRG*PCLPSM
Trigger: CATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGCC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTG +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGLHGGR*WGTLPL
Trigger: CAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTG +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQLHGGR*WGTLPL
Trigger: CAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTG +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQALHGGR*WGTLPL
Trigger: CAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTG +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGLHGGR*WGTLPL
Trigger: CAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAG...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TATCTGCTTGCTGATCTCCCACAGGGAGTCGATCTCGGCCGGCCGGGCATCCCCGCAGCACTCGCTTTATaGTCCAGCATTCCACATGGA +
Preference number: 5 (lower is better)
Translates to: YLLADLPQGVDLGRPGIPAALAL*SSIPHG
Trigger: TCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGC...GGGGATGCCCGGCCGGCCGAGATCGACTCCCTGTGGGAGATCAGCAAGCAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527355.5
CDS CCA 90 bp ATCGAAGTCCATCAGCACCGTCTCACACACAGACTTGGGGATCAGTaGGGTAGACGAGCCGCCAGGGATCACAGCAAGGAGGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: IEVHQHRLTHRLGDQ*GRRAARDHSKEVVP
Trigger: TGGGACAACCTCCTTGCTGTGATCCCTGGCGGCTCGTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGACGGTGCTGATGGACTTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000527923.1
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS CCA 90 bp GCTCCGGGACCCAACACACTAAGGGCACTGTCTCACCTCCAGTCATaGCGGCCGTACAGGTTGGTGAAAATCCGGTCTTCATCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: APGPNTLRALSHLQS*RPYRLVKIRSSSFS
Trigger: GCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTGAGACAGTGCCCTTAGTGTGTTGGGTCCCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526138.5
ENST00000528377.1
ENST00000534139.5
CDS CCA 90 bp AGCATTAGGAGCCCTGGAAGGAGGCTTTGGGAGCCAAGTCCCATTTaGGATGCATGCAGGACTGGCCACCACTCCCCCAGTTCAACCACT +
Preference number: 5 (lower is better)
Translates to: SIRSPGRRLWEPSPI*DACRTGHHSPSSTT
Trigger: AGTGGTTGAACTGGGGGAGTGGTGGCCAGTCCTGCATGCATCCCAAATGGGACTTGGCTCCCAAAGCCTCCTTCCAGGGCTCCTAATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524838.5
ENST00000528377.1
CDS-3UTR CAA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCGGGGCTTGCCCTGCTaGCCCTCAATGGACTCGATG +
Preference number: 5 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVRGLPC*PSMDSM
Trigger: CATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCGGGGCTTGCCCTGCTaGCCCTCAATGGACTCGATG +
Preference number: 5 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGRGLPC*PSMDSM
Trigger: CATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCGGGGCTTGCCCTGCTaGCCCTCAATGGACTCGATG +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARRGLPC*PSMDSM
Trigger: CATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCG...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCGGGGCTTGCCCTGCTaGCCCTCAATGGACTCGATG +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGRGLPC*PSMDSM
Trigger: CATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTTGCTGATCTCCCACAGGGCTTCAGGCGGGGCTaGCCCTGCTTGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: VTQSTNRMAFYLLADLPQGFRRG*PCLPSM
Trigger: CATTGAGGGCAAGCAGGGCAAGCCCCGCCTGAAGCC...CTGTGGGAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CAA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGCCACGTTGGCCACAGTaGTGGGGCAGCCAAACACTC +
Preference number: 5 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVPRWPQ*WGSQTL
Trigger: GAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGG...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVATVST*ATVVGQ
Trigger: CTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGC...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQATVST*ATVVGQ
Trigger: CTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGC...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGATVST*ATVVGQ
Trigger: CTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGC...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARATVST*ATVVGQ
Trigger: CTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQATVST*ATVVGQ
Trigger: CTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGC...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: TGQAAPSPRAQIVWPSICSLVPE*RSLPKP
Trigger: TGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACT...GCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CAA 90 bp TGCATCCGCTCCTCGAGCTCCGGCCGAAAGTGGCGGATCAGACCCTGCACAGGCGAGATGTTGAATAGTTaGGTGCCTGAGTTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: CIRSSSSGRKWRIRPCTGEMLNS*VPELRS
Trigger: AGAACGCAACTCAGGCACCAAACTATTCAACATCTC...GCCTGTGCAGGGTCTGATCCGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CAA 90 bp CCACGGCCCCTCAAACCCGATGTCTTGATCTCGCCCAGGATCCAGTCGGGCCCCCCAAATGAGGTTTTCTaGGGTGCTGTCTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: PRPLKPDVLISPRIQSGPPNEVF*GAVCKT
Trigger: AGTTTTGCAGACAGCACCCAAGAAAACCTCATTTGG...GGGGCCCGACTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAGGGGCCGTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS TCA 90 bp GTACAGGTTGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCCGCGCGGGAAGCGACCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: VQVGENPVFILQRAK*GFLGCCPRGKRPAE
Trigger: CTCGGCTGGTCGCTTCCCGCGCGGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529927.5
CDS GCA 90 bp CCTTTCAGCCTGGACAGAATAGGGAAGGCAATGAAGGGGACACCTTaGTCCGGGACCCAACACACTAAGGGCACTGTCTCACCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: PFSLDRIGKAMKGTP*SGTQHTKGTVSPPV
Trigger: GACTGGAGGTGAGACAGTGCCCTTAGTGTGTTGGGTCCCGGAGCAAGGTGTCCCCTTCATTGCCTTCCCTATTCTGTCCAGGCTGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528377.1
ENST00000534139.5
CDS-3UTR CAA 90 bp GGCCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTTGAGGCCAGTGGGGAAGTGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GLPSEGLFMKLHLRPVGKWRPYR*VKIRSS
Trigger: TGAAGACCGGATTTTCACCAACCTGTACGGCCGCCA...CTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CAA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCTTCACCACCAGATACTaGGGCCTGCCATCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRFTTRY*GLPSEG
Trigger: GCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAA...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CAA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACCACGTTGGCCACAGTaGTGGGGCAGCCAAACACTC +
Preference number: 5 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAPRWPQ*WGSQTL
Trigger: GAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGG...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCCACGTTGGCCACAGTaGTGGGGCAGCCAAACACTC +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAPRWPQ*WGSQTL
Trigger: GAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGCCACGTTGGCCACAGTaGTGGGGCAGCCAAACACTC +
Preference number: 5 (lower is better)
Translates to: HSLYCPAFHMDRRRTAGQPRWPQ*WGSQTL
Trigger: GAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGG...CTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGCCACGTTGGCCACAGTaGTGGGGCAGCCAAACACTC +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQPRWPQ*WGSQTL
Trigger: GAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGG...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCTCCAAGGCAGGGGGTaGTTCGCGGAGTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGLQGRG*FAEFFP
Trigger: TGGGAAGAACTCCGCGAACAACCCCCTGCCTTGGAG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGCTCGAGGAAGGATaGCAGACTCCAAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARVLEEG*QTPRQG
Trigger: CCCCTGCCTTGGAGTCTGCAATCCTTCCTCGAGCAC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS TCA 90 bp TCTAGGGAGACAAAGGGTCAGGAGGCCCAGAGTGCTCTGGGGCCATaGGGGATTGGGCCAGAAGCTACAGAATCTTGGGTCTCCCTATTT +
Preference number: 5 (lower is better)
Translates to: SRETKGQEAQSALGP*GIGPEATESWVSLF
Trigger: AAATAGGGAGACCCAAGATTCTGTAGCTTCTGGCCCAATCCCTCATGGCCCCAGAGCACTCTGGGCCTCCTGACCCTTTGTCTCCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528314.1
ENST00000528377.1
CDS-3UTR CAA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGATTCACCACCAGATACTaGGGCCTGCCATCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGFTTRY*GLPSEG
Trigger: GCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAA...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTTCACCACCAGATACTaGGGCCTGCCATCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAFTTRY*GLPSEG
Trigger: GCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAA...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTTCACCACCAGATACTaGGGCCTGCCATCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQFTTRY*GLPSEG
Trigger: GCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAA...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGATCAGACCCTGCACAGGCCAGGCGGCCCCGTCACCCAGAGCACAAATCGTATGAGATGTTGAATAGTTaGGTGCCTGAGTTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: GSDPAQARRPRHPEHKSYEMLNS*VPELRS
Trigger: AGAACGCAACTCAGGCACCAAACTATTCAACATCTC...ATACGATTTGTGCTCTGGGTGACGGGGCCGCCTGGCCTGTGCAGGGTCTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527355.5
ENST00000533919.5
CDS-3UTR CAA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCGTCTCACACACAGACTaGGGGATCAGTGGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRVSHTD*GISGVD
Trigger: GTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGAC...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CAA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCACCAAATGAGGTTTTCTaGGGTGCTGTCCGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAPNEVF*GAVRAG
Trigger: TCCCGCGCGGACAGCACCCAAGAAAACCTCATTTGG...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529927.5
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGAGGTCCCTCTGTCCTTaGCCTTCCCAGGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARRSLCP*PSQEVL
Trigger: CAAGACCTCCTGGGAAGGCAAAGGACAGAGGGACCT...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS GCA 90 bp GTCAAAATCATAGCCAGAGCCACAAGCATTCTTGCCAATCAGACCTaGCTCATAGGCCTCTCGGATGGCCACCTGCAGATTGGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: VKIIARATSILANQT*LIGLSDGHLQIGGL
Trigger: GAGGCCTCCAATCTGCAGGTGGCCATCCGAGAGGCCTATGAGGCAGGTCTGATTGGCAAGAATGCTTGTGGCTCTGGCTATGATTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000529927.5
ENST00000532244.5
ENST00000532303.5
ENST00000532343.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACCAAATGAGGTTTTCTaGGGTGCTGTCGTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTPNEVF*GAVVSP
Trigger: CGGCGACACGACAGCACCCAAGAAAACCTCATTTGG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CAA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGCCAAATGAGGTTTTCTaGGGTGCTGTCGTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVPNEVF*GAVVSP
Trigger: CGGCGACACGACAGCACCCAAGAAAACCTCATTTGG...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGWRPYR*VKIRSS
Trigger: TGAAGACCGGATTTTCACCAACCTGTACGGCCGCCA...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTWRPYR*VKIRSS
Trigger: TGAAGACCGGATTTTCACCAACCTGTACGGCCGCCA...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000647561.1
CDS-3UTR CAA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGTGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVWRPYR*VKIRSS
Trigger: TGAAGACCGGATTTTCACCAACCTGTACGGCCGCCA...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGTGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARWRPYR*VKIRSS
Trigger: TGAAGACCGGATTTTCACCAACCTGTACGGCCGCCA...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCCTCAAACCCGATGTCTaGATCTCGCCCAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQALKPDV*ISPRIQ
Trigger: CTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAG...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACTCAAACCCGATGTCTaGATCTCGCCCAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTLKPDV*ISPRIQ
Trigger: CTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCTCAAACCCGATGTCTaGATCTCGCCCAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGLKPDV*ISPRIQ
Trigger: CTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAG...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GCAGGATCTCCTTTGTCTTGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCCCTCAAACCCGATGTCTaGATCTCGCCCAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: AGSPLSCTSHLDSGNLSALKPDV*ISPRIQ
Trigger: CTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAG...GGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTCTCAAACCCGATGTCTaGATCTCGCCCAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGLKPDV*ISPRIQ
Trigger: CTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAG...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCTCAAACCCGATGTCTaGATCTCGCCCAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQLKPDV*ISPRIQ
Trigger: CTGGATCCTGGGCGAGATCAAGACATCGGGTTTGAG...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCTTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGFMKLH*RPVGKP
Trigger: TGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAA...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGATTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGFMKLH*RPVGKP
Trigger: TGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAA...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGTTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQFMKLH*RPVGKP
Trigger: TGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAA...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACATTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTFMKLH*RPVGKP
Trigger: TGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAA...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCAGGATCTCCTTTGTCTTGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCTTCACCACCAGATACTaGGGCCTGCCATCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SRISFVLYQSPRLREPFSFTTRY*GLPSEG
Trigger: GCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAA...GCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CAA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRSLVPE*RSLPKP
Trigger: TGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACT...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTGTTCATCCAGTCCACACCCTCACGGCATGGGGTACACTGGCCACAGCTCTCACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LVHPVHTLTAWGTLATALTWPEM*NSLVPE
Trigger: CTCAGGCACCAAACTATTCAACATCTCTGGCCATGT...GAGAGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGTGGACTGGATGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CAA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRTVQGW*TWPEML
Trigger: CAACATCTCTGGCCATGTCAACCACCCTTGCACTGT...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAGTCTCACACACAGACTaGGGGATCAGTGGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGVSHTD*GISGVD
Trigger: GTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGAC...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGTCTCACACACAGACTaGGGGATCAGTGGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTVSHTD*GISGVD
Trigger: GTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGAC...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTCTCACACACAGACTaGGGGATCAGTGGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARVSHTD*GISGVD
Trigger: GTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGAC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGTCTCACACACAGACTaGGGGATCAGTGGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQVSHTD*GISGVD
Trigger: GTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGAC...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAAACGTGCCATCACCTaGTTCATCCAGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: EGGQHSLYCPAFHMDRRRKRAIT*FIQSTP
Trigger: GGGTGTGGACTGGATGAACAAGGTGATGGCACGTTT...CCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCCCCGTCACCCAGAGCACAAATCGTATGGCCTTCTATCTGCTTGCTGATCTCAAACGTGCCATCACCTaGTTCATCCAGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: GPVTQSTNRMAFYLLADLKRAIT*FIQSTP
Trigger: GGGTGTGGACTGGATGAACAAGGTGATGGCACGTTT...GAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533919.5
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGTGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTTGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTTGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACATGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCATGGCCTTCTATCTGCTaGCTGATCTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAWPSIC*LISHRE
Trigger: CTCCCTGTGGGAGATCAGCAAGCAGATAGAAGGCCA...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGAGGCTCAGGGGGATTTaGTCCTTTGTCTGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVRLRGI*SFVCGH
Trigger: ATGCCCACAGACAAAGGACAAAATCCCCCTGAGCCT...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CAA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCATAAGAGTGACCTTTTaGGCCTGCTCTCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRIRVTF*ACSPQL
Trigger: GAGCTGGGGAGAGCAGGCCAAAAAGGTCACTCTTAT...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS TCA 90 bp GTACAGGTTGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTAGATACCCGCGCGGGAAGCGACCA +
Preference number: 5 (lower is better)
Translates to: VQVGENPVFILQRAK*GFLGCCRYPRGKRP
Trigger: TGGTCGCTTCCCGCGCGGGTATCTACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415352.6
CDS TCA 90 bp ACCTCGACTCAGGGAACCTCCAGTCATGGCGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCTTCAGCGAGCCAAATGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: TSTQGTSSHGGRTGW*KSGLHPSASQMRFS
Trigger: AGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTTCCCTGAGTCGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530638.1
CDS TCA 90 bp CAGCAGGTTGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCGTGTCGCCGCTGAAACGCACAGA +
Preference number: 5 (lower is better)
Translates to: QQVGENPVFILQRAK*GFLGCCRVAAETHR
Trigger: TCTGTGCGTTTCAGCGGCGACACGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533075.5
CDS-3UTR CAA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGTCAGCAGGATCTCCTTaGTCTTGTACCAGTCACCTC +
Preference number: 5 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVSAGSP*SCTSHL
Trigger: GAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGA...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCGAGCCACAAGCATTCTaGCCAATCAGACCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAEPQAF*PIRPAS
Trigger: TGAGGCAGGTCTGATTGGCAAGAATGCTTGTGGCTC...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGAGCCACAAGCATTCTaGCCAATCAGACCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGEPQAF*PIRPAS
Trigger: TGAGGCAGGTCTGATTGGCAAGAATGCTTGTGGCTC...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGAGCCACAAGCATTCTaGCCAATCAGACCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQAREPQAF*PIRPAS
Trigger: TGAGGCAGGTCTGATTGGCAAGAATGCTTGTGGCTC...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAGAGCCACAAGCATTCTaGCCAATCAGACCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGEPQAF*PIRPAS
Trigger: TGAGGCAGGTCTGATTGGCAAGAATGCTTGTGGCTC...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGSLVPE*RSLPKP
Trigger: TGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACT...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQSLVPE*RSLPKP
Trigger: TGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACT...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGSLVPE*RSLPKP
Trigger: TGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACT...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTATVQGW*TWPEML
Trigger: CAACATCTCTGGCCATGTCAACCACCCTTGCACTGT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARTVQGW*TWPEML
Trigger: CAACATCTCTGGCCATGTCAACCACCCTTGCACTGT...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTTVQGW*TWPEML
Trigger: CAACATCTCTGGCCATGTCAACCACCCTTGCACTGT...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGTVQGW*TWPEML
Trigger: CAACATCTCTGGCCATGTCAACCACCCTTGCACTGT...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTAAACGTGCCATCACCTaGTTCATCCAGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGKRAIT*FIQSTP
Trigger: GGGTGTGGACTGGATGAACAAGGTGATGGCACGTTT...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAAAACGTGCCATCACCTaGTTCATCCAGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: GQHSLYCPAFHMDRRRTAKRAIT*FIQSTP
Trigger: GGGTGTGGACTGGATGAACAAGGTGATGGCACGTTT...TGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTAAACGTGCCATCACCTaGTTCATCCAGTCCACACCC +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGKRAIT*FIQSTP
Trigger: GGGTGTGGACTGGATGAACAAGGTGATGGCACGTTT...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCGCAGCACTCGCTTTATaGTCCAGCATTCCACATGGA +
Preference number: 5 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRAALAL*SSIPHG
Trigger: TCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGC...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CAA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAGCCGGCTCCCAGCCTTaGATGCCACAAGTAAACAAA +
Preference number: 5 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGAGSQP*MPQVNK
Trigger: TTTGTTTACTTGTGGCATCAAAGGCTGGGAGCCGGC...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS TCA 90 bp GTACAGGTTGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCGTGTCGCCGCTGAAACGCACAGA +
Preference number: 5 (lower is better)
Translates to: VQVGENPVFILQRAK*GFLGCCRVAAETHR
Trigger: TCTGTGCGTTTCAGCGGCGACACGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322776.11
ENST00000525086.5
ENST00000647561.1
CDS TCA 90 bp TCAGGGAACCTTTCAGCCTCCAGTCATGGCGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCTTCAGCGAGCCAAATGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SGNLSASSHGGRTGW*KSGLHPSASQMRFS
Trigger: AGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGCTGAAAGGTTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000528314.1
ENST00000528328.1
ENST00000528548.5
ENST00000529927.5
ENST00000530014.5
ENST00000530103.5
ENST00000532244.5
ENST00000532343.5
ENST00000647561.1
CDS CCA 90 bp AAGGGCACAGACATCTCCTCCTCCACAGTGCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGTTTGGTGCCTGAGTTGCGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: KGTDISSSTVQGWLT*PEMLNSLVPELRSL
Trigger: CAGAGAACGCAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGAGGAGGAGATGTCTGTGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTC +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQRISFV*YQSPRL
Trigger: GAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCT...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTC +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQARISFV*YQSPRL
Trigger: GAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCT...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTC +
Preference number: 5 (lower is better)
Translates to: QHSLYCPAFHMDRRRTAGRISFV*YQSPRL
Trigger: GAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCT...GCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTC +
Preference number: 5 (lower is better)
Translates to: VGSTRFIVQHSTWIDAGQRISFV*YQSPRL
Trigger: GAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCT...CTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp ACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTC +
Preference number: 5 (lower is better)
Translates to: TRFIVQHSTWIDAGQQARRISFV*YQSPRL
Trigger: GAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCT...CCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGTCAGCAGGATCTCCTTaGTCTTGTACCAGTCACCTC +
Preference number: 5 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVSAGSP*SCTSHL
Trigger: GAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGA...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTTCAGCAGGATCTCCTTaGTCTTGTACCAGTCACCTC +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGSAGSP*SCTSHL
Trigger: GAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGA...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVTWPEM*NSLVPE
Trigger: CTCAGGCACCAAACTATTCAACATCTCTGGCCATGT...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCGCAGCACTCGCTTTATaGTCCAGCATTCCACATGGA +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQAAALAL*SSIPHG
Trigger: TCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGC...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGCAGCACTCGCTTTATaGTCCAGCATTCCACATGGA +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGAALAL*SSIPHG
Trigger: TCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGC...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACACCAAATGAGGTTTTCTaGGGTGCTGTAGATACCCGC +
Preference number: 5 (lower is better)
Translates to: GGQHSLYCPAFHMDRRRTPNEVF*GAVDTR
Trigger: GCGGGTATCTACAGCACCCAAGAAAACCTCATTTGG...TGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415352.6
CDS TCA 90 bp GTACAGGTTGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCTCGGCCGAAGAGGCGAAATGTGT +
Preference number: 5 (lower is better)
Translates to: VQVGENPVFILQRAK*GFLGCCLGRRGEMC
Trigger: ACACATTTCGCCTCTTCGGCCGAGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524876.5
ENST00000526138.5
ENST00000528548.5
CDS TCA 90 bp GTACAGGTTGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCTAGGGAGACAAAGGGTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: VQVGENPVFILQRAK*GFLGCCLGRQRVRR
Trigger: CCTCCTGACCCTTTGTCTCCCTAGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528314.1
ENST00000528377.1
CDS-3UTR CAA 90 bp AGCAGGATCTCCTTTGTCTTGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTC +
Preference number: 5 (lower is better)
Translates to: SRISFVLYQSPRLREPFSRISFV*YQSPRL
Trigger: GAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCT...GCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CAA 90 bp CAGCAGGATCTCCTTTGTCTTGTACCAGTCACCTCGACTCAGGGAACCTTTCAGTCAGCAGGATCTCCTTaGTCTTGTACCAGTCACCTC +
Preference number: 5 (lower is better)
Translates to: QQDLLCLVPVTSTQGTFQSAGSP*SCTSHL
Trigger: GAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGA...CTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS-3UTR CAA 90 bp CGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGAGATGTTGAATAGTTaGGTGCCTGAGTTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: RFIVQHSTWIDAGQQARVEMLNS*VPELRS
Trigger: AGAACGCAACTCAGGCACCAAACTATTCAACATCTC...CACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCGAGATGTTGAATAGTTaGGTGCCTGAGTTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRREMLNS*VPELRS
Trigger: AGAACGCAACTCAGGCACCAAACTATTCAACATCTC...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322776.11
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGTWPEM*NSLVPE
Trigger: CTCAGGCACCAAACTATTCAACATCTCTGGCCATGT...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGAACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RVGSTRFIVQHSTWIDAGTWPEM*NSLVPE
Trigger: CTCAGGCACCAAACTATTCAACATCTCTGGCCATGT...TCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp GGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GSTRFIVQHSTWIDAGQQTWPEM*NSLVPE
Trigger: CTCAGGCACCAAACTATTCAACATCTCTGGCCATGT...CTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp AGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: STRFIVQHSTWIDAGQQATWPEM*NSLVPE
Trigger: CTCAGGCACCAAACTATTCAACATCTCTGGCCATGT...GGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp CTGGAGGGTGGGCAGCACTCGCTTTATTGTCCAGCATTCCACATGGATAGACGCATCCTCATGACTACGTaGCAATTATTCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: LEGGQHSLYCPAFHMDRRILMTT*QLFCPV
Trigger: CACTGGGCAGAATAATTGCAACGTAGTCATGAGGAT...GCGTCTATCCATGTGGAATGCTGGACAATAAAGCGAGTGCTGCCCACCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CCA 90 bp AGTTCTTTCAAGGGCACAGACATCTCCTCCTCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATGTTGAATAGTTTGGTGCCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SSFKGTDISSSTVQG*LTWPEMLNSLVPEL
Trigger: CAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGAGGAGGAGATGTCTGTGCCCTTGAAAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 90 bp ATGCCACAAGTAAACAAACCTCGCATGTCGCCTTCTGCTGGGTCCTaGTGTGTTCCACTTTCTATAGATTCGGCGTTTAGTGTGCACCTG +
Preference number: 5 (lower is better)
Translates to: MPQVNKPRMSPSAGS*CVPLSIDSAFSVHL
Trigger: CAGGTGCACACTAAACGCCGAATCTATAGAAAGTGGAACACACCAGGACCCAGCAGAAGGCGACATGCGAGGTTTGTTTACTTGTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS-3UTR CAA 90 bp CTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGAGATGTTGAATAGTTaGGTGCCTGAGTTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: LYCPAFHMDRRRTAGQGGEMLNS*VPELRS
Trigger: AGAACGCAACTCAGGCACCAAACTATTCAACATCTC...ACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TCGCTTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGAGATGTTGAATAGTTaGGTGCCTGAGTTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: SLYCPAFHMDRRRTAGQGEMLNS*VPELRS
Trigger: AGAACGCAACTCAGGCACCAAACTATTCAACATCTC...ACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS-3UTR CAA 90 bp TTTATTGTCCAGCATTCCACATGGATAGACGCAGGACAGCAGGCCAGGGTGGTGACCATCTCTGTTCTTTaGTGCTGTAATCATCCTTCC +
Preference number: 5 (lower is better)
Translates to: FIVQHSTWIDAGQQARVVTISVL*CCNHPS
Trigger: GGAAGGATGATTACAGCACAAAAGAACAGAGATGGT...CACCACCCTGGCCTGCTGTCCTGCGTCTATCCATGTGGAATGCTGGACAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS GCA 72 bp CACGCGCCCGACGCCAGCGCCGCGCACCGGTATCGCTaGGCCCCTTCAACTTCGCCAGCGGCCCCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: HAPDASAAHRYR*APSTSPAAPPP
Trigger: AGGAGGCGGGGCCGCTGGCGAAGTTGAAGGGGCGCAGCGATACCGGTGCGCGGCGCTGGCGTCGGGCGCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS GCA 72 bp CCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTTaGCAGCATCGCGGCGGGCCAGATGGGTCACCTCAC +
Preference number: 6 (lower is better)
Translates to: PRGKRPAEQPPC*QHRGGPDGSPH
Trigger: GTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000526138.5
ENST00000528328.1
ENST00000528548.5
ENST00000529867.5
ENST00000529927.5
ENST00000530014.5
ENST00000530103.5
ENST00000530638.1
ENST00000532244.5
ENST00000532260.1
ENST00000532303.5
ENST00000532343.5
ENST00000533075.5
ENST00000534139.5
ENST00000647561.1
CDS GCA 72 bp AAGGGCTCTCCAGAGGCCACTACAGACCCCAGGGACTaGTCGTGCACGGGCGCGGCCGCGACACCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: KGSPEATTDPRD*SCTGAAATPGP
Trigger: GGGGCCGGGTGTCGCGGCCGCGCCCGTGCACGAGCAGTCCCTGGGGTCTGTAGTGGCCTCTGGAGAGCCCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530014.5
ENST00000532260.1
CDS CAA 72 bp CCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCCAGATGGGTCACCTCA +
Preference number: 6 (lower is better)
Translates to: PAREATSRAAAV*PASRRARWVTS
Trigger: TGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000526138.5
ENST00000528328.1
ENST00000528548.5
ENST00000529867.5
ENST00000530014.5
ENST00000530103.5
ENST00000530638.1
ENST00000532244.5
ENST00000532260.1
ENST00000532303.5
ENST00000533075.5
ENST00000534139.5
ENST00000647561.1
CDS CAA 72 bp GCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCCAGATGGGTCACCTCA +
Preference number: 6 (lower is better)
Translates to: AAREATSRAAAV*PASRRARWVTS
Trigger: TGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532343.5
CDS CAA 72 bp TCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCCAGATGGGTCACCTCA +
Preference number: 6 (lower is better)
Translates to: SAREATSRAAAV*PASRRARWVTS
Trigger: TGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529927.5
CDS CAA 90 bp TGGGTGCTGTCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCCAGATGGGTCACCTCACGCTGTCAC +
Preference number: 6 (lower is better)
Translates to: WVLSAREATSRAAAV*PASRRARWVTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGACAGCACCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529927.5
CDS GCA 72 bp TCTCCAGAGGCCACTACAGACCCCAGGGACTGCTCGTaGACGGGCGCGGCCGCGACACCCGGCCCCAAACAC +
Preference number: 6 (lower is better)
Translates to: SPEATTDPRDCS*TGAAATPGPKH
Trigger: GTGTTTGGGGCCGGGTGTCGCGGCCGCGCCCGTGCACGAGCAGTCCCTGGGGTCTGTAGTGGCCTCTGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530014.5
ENST00000532260.1
CDS CCA 72 bp TCAACCAGGCCGGAGCGGGGGCCTTCCCGCCTGGCCTaGGGAGAAGGGCTCTCCAGAGGCCACTACAGACCC +
Preference number: 6 (lower is better)
Translates to: STRPERGPSRLA*GEGLSRGHYRP
Trigger: GGGTCTGTAGTGGCCTCTGGAGAGCCCTTCTCCCCAGGCCAGGCGGGAAGGCCCCCGCTCCGGCCTGGTTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530014.5
ENST00000532260.1
CDS CCA 72 bp ACCGGCCTGGGGTCCGCCTTCCTCCCTCCACCGGGCTaGCATTTAGCGGTGGCTGTCCCCACCGCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: TGLGSAFLPPPG*HLAVAVPTARS
Trigger: AGAGCGAGCGGTGGGGACAGCCACCGCTAAATGCCAGCCCGGTGGAGGGAGGAAGGCGGACCCCAGGCCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CAA 90 bp GCACAGATACCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCCAGATGGGTCACCTCACGCTGTCAC +
Preference number: 6 (lower is better)
Translates to: AQIPAREATSRAAAV*PASRRARWVTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGGTATCTGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000322776.11
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000526138.5
ENST00000528328.1
ENST00000528548.5
ENST00000529867.5
ENST00000530014.5
ENST00000530103.5
ENST00000530638.1
ENST00000532244.5
ENST00000532260.1
ENST00000532303.5
ENST00000533075.5
ENST00000534139.5
ENST00000647561.1
CDS CAA 90 bp TTCTTGGGTGCCGCGCGGGAAGCGACCAGCCGAGCAGCCGCCGTGTaGCCAGCATCGCGGCGGGCCAGATGGGTCACCTCACGCTGTCAC +
Preference number: 6 (lower is better)
Translates to: FLGAAREATSRAAAV*PASRRARWVTSRCH
Trigger: GTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGCTCGGCTGGTCGCTTCCCGCGCGGCACCCAAGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532343.5
CDS GCA 72 bp CTCCCGGTCCTTGCAGGTGCCCGGCTCCCCCTCGTCTaGGTTCACCACCAGATACTTGGGCCTGCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: LPVLAGARLPLV*VHHQILGPAGA
Trigger: GGCCCCTGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525086.5
CDS GCA 72 bp GCCAGACTGTGGGCTTCCCCACCCCGGGCGTCCGTGTaGTCGAGGAAGGATTGCAGACTCCAAGGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: ARLWASPPRASV*SRKDCRLQGRG
Trigger: CCCCCTGCCTTGGAGTCTGCAATCCTTCCTCGAGCACACGGACGCCCGGGGTGGGGAAGCCCACAGTCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CCA 72 bp CCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTTaGGCCTGCAGGGGCCCACAGGTCAGACAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: PAPPRLRSPPDT*ACRGPQVRQAA
Trigger: GGCAGCCTGTCTGACCTGTGGGCCCCTGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525086.5
CDS CAA 72 bp CCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTaGGGCCTGCAGGGGCCCACAGGTCAGACAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PGSPSSAFTTRY*GLQGPTGQTGC
Trigger: GCAGCCTGTCTGACCTGTGGGCCCCTGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525086.5
CDS GCA 72 bp GGACAGCAGGCGGCCCTGGGGGAGCCTGTGTGTTGTTaGCAGCCTACTCTCTATCTGGCCCCAGCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: GQQAALGEPVCC*QPTLYLAPAGK
Trigger: CTTCCCGGCTGGGGCCAGATAGAGAGTAGGCTGGCAACAACACACAGGCTCCCCCAGGGCCGCCTGCTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CCA 72 bp CAGCAAGTCAGAGGGTCAAGGGAGTCGGCCCCGCGTTaGGACCCGTTCCCCTACTTCAACCAGGCCGGAGCG +
Preference number: 6 (lower is better)
Translates to: QQVRGSRESAPR*DPFPYFNQAGA
Trigger: CGCTCCGGCCTGGTTGAAGTAGGGGAACGGGTCCCAACGCGGGGCCGACTCCCTTGACCCTCTGACTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530014.5
ENST00000532260.1
CDS CCA 72 bp GCAATTATTCTGCCCAGTGCGAGCCCTGCCAGACTGTaGGCTTCCCCACCCCGGGCGTCCGTGTGCTCGAGG +
Preference number: 6 (lower is better)
Translates to: AIILPSASPARL*ASPPRASVCSR
Trigger: CCTCGAGCACACGGACGCCCGGGGTGGGGAAGCCCACAGTCTGGCAGGGCTCGCACTGGGCAGAATAATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CCA 72 bp CTGAGGCTGAGGAACTGGCGCGATAGAGACGCTAGGTaGCGCGCAGGAAAGACGTCACGCGCCCGACGCCAG +
Preference number: 6 (lower is better)
Translates to: LRLRNWRDRDAR*RAGKTSRARRQ
Trigger: CTGGCGTCGGGCGCGTGACGTCTTTCCTGCGCGCCACCTAGCGTCTCTATCGCGCCAGTTCCTCAGCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CAA 72 bp GGGACAGCAGGCGGCCCTGGGGGAGCCTGTGTGTTGTaGCCAGCCTACTCTCTATCTGGCCCCAGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: GTAGGPGGACVL*PAYSLSGPSRE
Trigger: TTCCCGGCTGGGGCCAGATAGAGAGTAGGCTGGCAACAACACACAGGCTCCCCCAGGGCCGCCTGCTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CAA 72 bp CCAGCAAGTCAGAGGGTCAAGGGAGTCGGCCCCGCGTaGGGACCCGTTCCCCTACTTCAACCAGGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: PASQRVKGVGPA*GPVPLLQPGRS
Trigger: GCTCCGGCCTGGTTGAAGTAGGGGAACGGGTCCCAACGCGGGGCCGACTCCCTTGACCCTCTGACTTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530014.5
ENST00000532260.1
CDS CAA 90 bp CCTCCACGGCGGCAGATTGTGGGGGACACTGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAGCCAAACACTCCCACGTCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: PPRRQIVGDTATVST*ATVVGQPNTPTSAG
Trigger: CCCCGCAGACGTGGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 90 bp TTGCAGGTGCCCGGCTCCCCCTCGTCTGCGTTCACCACCAGATACTaGGGCCTGCAGGGGCCCACAGGTCAGACAGGCTGCCATCTGAGG +
Preference number: 6 (lower is better)
Translates to: LQVPGSPSSAFTTRY*GLQGPTGQTGCHLR
Trigger: CCTCAGATGGCAGCCTGTCTGACCTGTGGGCCCCTGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525086.5
CDS CCA 72 bp GCAGCCGCCGTGTTGCCAGCATCGCGGCGGGCCAGATaGGTCACCTCACGCTGTCACCTTCATAGCACTGAG +
Preference number: 6 (lower is better)
Translates to: AAAVLPASRRAR*VTSRCHLHSTE
Trigger: CTCAGTGCTATGAAGGTGACAGCGTGAGGTGACCCATCTGGCCCGCCGCGATGCTGGCAACACGGCGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000528328.1
ENST00000528548.5
ENST00000529927.5
ENST00000532244.5
ENST00000532303.5
ENST00000532343.5
ENST00000647561.1
CDS TCA 72 bp GGCGGGGCTTGCCCTGCTTGCCCTCAATGGACTCGATaGGCGCTGTCTCCTCTCCACAGATGTAGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GGACPACPQWTR*ALSPLHRCRPQ
Trigger: CTGGGGCCTACATCTGTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000529927.5
ENST00000532244.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS GCA 72 bp CCAGGTACCTCCACGGCGGCAGATTGTGGGGGACACTaGCACTGTCTCCACGTTGGCCACAGTTGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: PGTSTAADCGGH*HCLHVGHSCGA
Trigger: TGCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAGGTACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 72 bp GGGACACTGCCACTGTCTCCACGTTGGCCACAGTTGTaGGGCAGCCAAACACTCCCACGTCTGCGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GTLPLSPRWPQL*GSQTLPRLRGR
Trigger: CCTTCCCCGCAGACGTGGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 90 bp GGGATCAGTGGGGTAGACGAGCCGCCAGGGATCACAGCAAGGAGGTaGTCCCAGCCGCCCGTGACACCCCCAGCATGCTTCTCAATCAGT +
Preference number: 6 (lower is better)
Translates to: GISGVDEPPGITARR*SQPPVTPPACFSIS
Trigger: ACTGATTGAGAAGCATGCTGGGGGTGTCACGGGCGGCTGGGACAACCTCCTTGCTGTGATCCCTGGCGGCTCGTCTACCCCACTGATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS TCA 72 bp AGCCTAGCCAGATCCCGGGTGTCACAGGACACAGTCTaGCCCAGGGTTACGCCAGGCCTTACCCACGTCTGC +
Preference number: 6 (lower is better)
Translates to: SLARSRVSQDTV*PRVTPGLTHVC
Trigger: GCAGACGTGGGTAAGGCCTGGCGTAACCCTGGGTCAGACTGTGTCCTGTGACACCCGGGATCTGGCTAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS GCA 72 bp ACGATCACCGCAGCTGTGCCCAGGCCTGTCTGTGCCTaGACCAGCGCATCGAAGTCCATCAGCACCGTCTCA +
Preference number: 6 (lower is better)
Translates to: TITAAVPRPVCA*TSASKSISTVS
Trigger: TGAGACGGTGCTGATGGACTTCGATGCGCTGGTGCAGGCACAGACAGGCCTGGGCACAGCTGCGGTGATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000527923.1
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 72 bp AGCCAGCAAACCAGGTACCTCCACGGCGGCAGATTGTaGGGGACACTGCCACTGTCTCCACGTTGGCCACAG +
Preference number: 6 (lower is better)
Translates to: SQQTRYLHGGRL*GTLPLSPRWPQ
Trigger: CTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAGGTACCTGGTTTGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 72 bp AGGCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCAGCGCCTCCACGGCCC +
Preference number: 6 (lower is better)
Translates to: RLPSEGLFMKLH*RPVGKPAPPRP
Trigger: GGGCCGTGGAGGCGCTGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525086.5
CDS CAA 90 bp AGGTCAGACAGGCTGCCATCTGAGGGCTTATTCATGAAGCTCCACTaGAGGCCAGTGGGGAAGCCAGCGCCTCCACGGCCCCTCAAACCC +
Preference number: 6 (lower is better)
Translates to: RSDRLPSEGLFMKLH*RPVGKPAPPRPLKP
Trigger: GGGTTTGAGGGGCCGTGGAGGCGCTGGCTTCCCCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGCCTGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525086.5
CDS CAA 90 bp CCTCCACGGCGGCAGATTGTGGGGGACACTGCCACTGTCTCCACGTaGGCCACAGTTGTGGGGCAGCCAAACACTCCTTCAGGGAAATGG +
Preference number: 6 (lower is better)
Translates to: PPRRQIVGDTATVST*ATVVGQPNTPSGKW
Trigger: CCATTTCCCTGAAGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CAA 90 bp TCGCCCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTCAGGGAACCTCCAGTCATGGCGGCC +
Preference number: 6 (lower is better)
Translates to: SPRIQSGPFSRISFV*YQSPRLREPPVMAA
Trigger: GGCCGCCATGACTGGAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530638.1
CDS CAA 90 bp GCGTCCGTGTGCTCGAGGAAGGATTGCAGACTCCAAGGCAGGGGGTaGTTCGCGGAGTTCTTCCCAGAGGGCCTGTCACGGAATCCTAGG +
Preference number: 6 (lower is better)
Translates to: ASVCSRKDCRLQGRG*FAEFFPEGLSRNPR
Trigger: CCTAGGATTCCGTGACAGGCCCTCTGGGAAGAACTCCGCGAACAACCCCCTGCCTTGGAGTCTGCAATCCTTCCTCGAGCACACGGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS TCA 72 bp GTTCACCCCATGCCCTTAGCCTCAGAACAGGCACTGTaGAGGTGGAGCCACAGAGCAGCACTGGTGCGGAGG +
Preference number: 6 (lower is better)
Translates to: VHPMPLASEQAL*RWSHRAALVRR
Trigger: CCTCCGCACCAGTGCTGCTCTGTGGCTCCACCTTCACAGTGCCTGTTCTGAGGCTAAGGGCATGGGGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CAA 72 bp CAAAGCCAGCAAACCAGGTACCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTGTCTCCACGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: QSQQTRYLHGGR*WGTLPLSPRWP
Trigger: TGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAGGTACCTGGTTTGCTGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 72 bp TGCTCGAGGAAGGATTGCAGACTCCAAGGCAGGGGGTaGTTCGCGGAGTTCTTCCCAGAGGGCCTGTCACGG +
Preference number: 6 (lower is better)
Translates to: CSRKDCRLQGRG*FAEFFPEGLSR
Trigger: CCGTGACAGGCCCTCTGGGAAGAACTCCGCGAACAACCCCCTGCCTTGGAGTCTGCAATCCTTCCTCGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CAA 90 bp GTTCTCTGCCAAAGCCAGCAAACCAGGTACCTCCACGGCGGCAGATaGTGGGGGACACTGCCACTGTCTCCACGTTGGCCACAGTTGTGG +
Preference number: 6 (lower is better)
Translates to: VLCQSQQTRYLHGGR*WGTLPLSPRWPQLW
Trigger: CCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCACAATCTGCCGCCGTGGAGGTACCTGGTTTGCTGGCTTTGGCAGAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 90 bp TGCACCAGCGCATCGAAGTCCATCAGCACCGTCTCACACACAGACTaGGGGATCAGTGGGGTAGACGAGCCGCCAGGGATCACAGCAAGG +
Preference number: 6 (lower is better)
Translates to: CTSASKSISTVSHTD*GISGVDEPPGITAR
Trigger: CCTTGCTGTGATCCCTGGCGGCTCGTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGACGGTGCTGATGGACTTCGATGCGCTGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000527923.1
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS CAA 90 bp TCGCCCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCCGTGTCGCC +
Preference number: 6 (lower is better)
Translates to: SPRIQSGPFSRISFV*YQSPRLREPFSRVA
Trigger: GGCGACACGGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532303.5
CDS GCA 72 bp TTCAGGGCGCAGAGCAGTGGACGGGAAATCAGGAGGTaGGCATCCCTAAATGGGGCAATGACCCCTTCACGC +
Preference number: 6 (lower is better)
Translates to: FRAQSSGREIRR*ASLNGAMTPSR
Trigger: GCGTGAAGGGGTCATTGCCCCATTTAGGGATGCGCACCTCCTGATTTCCCGTCCACTGCTCTGCGCCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524876.5
ENST00000526138.5
ENST00000528328.1
ENST00000528548.5
ENST00000532260.1
CDS CCA 72 bp CATCAGCACCGTCTCACACACAGACTTGGGGATCAGTaGGGTAGACGAGCCGCCAGGGATCACAGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: HQHRLTHRLGDQ*GRRAARDHSKE
Trigger: CTCCTTGCTGTGATCCCTGGCGGCTCGTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGACGGTGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000527923.1
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS CCA 72 bp CACGCTGTCACCTTCATAGCACTGAGGCTGAGGAACTaGCGCGATAGAGACGCTAGGTGGCGCGCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: HAVTFIALRLRN*RDRDARWRAGK
Trigger: CTTTCCTGCGCGCCACCTAGCGTCTCTATCGCGCCAGTTCCTCAGCCTCAGTGCTATGAAGGTGACAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532303.5
ENST00000647561.1
CDS CAA 72 bp GCATCGAAGTCCATCAGCACCGTCTCACACACAGACTaGGGGATCAGTGGGGTAGACGAGCCGCCAGGGATC +
Preference number: 6 (lower is better)
Translates to: ASKSISTVSHTD*GISGVDEPPGI
Trigger: GATCCCTGGCGGCTCGTCTACCCCACTGATCCCCAAGTCTGTGTGTGAGACGGTGCTGATGGACTTCGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526770.5
ENST00000527355.5
ENST00000527923.1
ENST00000529927.5
ENST00000532303.5
ENST00000647561.1
CDS CAA 72 bp TGGGGGACACTGCCACTGTCTCCACGTTGGCCACAGTaGTGGGGCAGCCAAACACTCCTTCAGGGAAATGGG +
Preference number: 6 (lower is better)
Translates to: WGTLPLSPRWPQ*WGSQTLLQGNG
Trigger: CCCATTTCCCTGAAGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CAA 90 bp TCGCCCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCCTGGACAGA +
Preference number: 6 (lower is better)
Translates to: SPRIQSGPFSRISFV*YQSPRLREPFSLDR
Trigger: TCTGTCCAGGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526770.5
ENST00000528377.1
ENST00000534139.5
CDS CAA 90 bp CGACTCAGGGAACCTTTCAGCCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCGTGTCGCCGCTGAAACGCACA +
Preference number: 6 (lower is better)
Translates to: RLREPFSLQSWRPYR*VKIRSSSVSPLKRT
Trigger: TGTGCGTTTCAGCGGCGACACGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGCTGAAAGGTTCCCTGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529867.5
CDS CAA 90 bp TCGCCCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTCAGGGAACCTTTCAGCAGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: SPRIQSGPFSRISFV*YQSPRLREPFSRLV
Trigger: CACCAACCTGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533075.5
CDS GCA 72 bp AGGAGGCTTTGGGAGCCAAGTCCCATTTGGGATGCATaGAGGACTGGCCACCACTCCCCCAGTTCAACCACT +
Preference number: 6 (lower is better)
Translates to: RRLWEPSPIWDA*RTGHHSPSSTT
Trigger: AGTGGTTGAACTGGGGGAGTGGTGGCCAGTCCTGCATGCATCCCAAATGGGACTTGGCTCCCAAAGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524838.5
ENST00000528377.1
CDS GCA 72 bp TGGAAGGAGGCTTTGGGAGCCAAGTCCCATTTGGGATaGATGCAGGACTGGCCACCACTCCCCCAGTTCAAC +
Preference number: 6 (lower is better)
Translates to: WKEALGAKSHLG*MQDWPPLPQFN
Trigger: GTTGAACTGGGGGAGTGGTGGCCAGTCCTGCATGCATCCCAAATGGGACTTGGCTCCCAAAGCCTCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524838.5
ENST00000528377.1
CDS GCA 72 bp AGGTTAAATGAAGCCACAGCAAGCAAGCCCCCAACCTaGCCGATGCTCACCCTCACGGCATGGGGTACACTG +
Preference number: 6 (lower is better)
Translates to: RLNEATASKPPT*PMLTLTAWGTL
Trigger: CAGTGTACCCCATGCCGTGAGGGTGAGCATCGGGCAGGTTGGGGGCTTGCTTGCTGTGGCTTCATTTAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534352.1
CDS GCA 72 bp TTCAGCGAGCCAAATGAGGTTTTCTTGGGTGCTGTCTaGAAAACTTCCGCCAGGCCGAGGACGTGTCGCCGC +
Preference number: 6 (lower is better)
Translates to: FSEPNEVFLGAV*KTSARPRTCRR
Trigger: GCGGCGACACGTCCTCGGCCTGGCGGAAGTTTTGCAGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530103.5
CDS CCA 72 bp CAGTGGACGGGAAATCAGGAGGTGCGCATCCCTAAATaGGGCAATGACCCCTTCACGCCCTACAAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: QWTGNQEVRIPK*GNDPFTPYKAV
Trigger: CACAGCCTTGTAGGGCGTGAAGGGGTCATTGCCCCATTTAGGGATGCGCACCTCCTGATTTCCCGTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526138.5
ENST00000528548.5
ENST00000532260.1
CDS CCA 72 bp CAGTGGACGGGAAATCAGGAGGTGCGCATCCCTAAATaGGGCAATGACCCCTTCACGCCCTACAAGGCGTGT +
Preference number: 6 (lower is better)
Translates to: QWTGNQEVRIPK*GNDPFTPYKAC
Trigger: ACACGCCTTGTAGGGCGTGAAGGGGTCATTGCCCCATTTAGGGATGCGCACCTCCTGATTTCCCGTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524876.5
ENST00000528328.1
CDS CCA 72 bp GGGAGCCTGTGTGTTGTTGCCAGCCTACTCTCTATCTaGCCCCAGCCGGGAAGCCACTCAGAAATCCCTAAG +
Preference number: 6 (lower is better)
Translates to: GSLCVVASLLSI*PQPGSHSEIPK
Trigger: CTTAGGGATTTCTGAGTGGCTTCCCGGCTGGGGCCAGATAGAGAGTAGGCTGGCAACAACACACAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CCA 72 bp GGGACACTGCCACTGTCTCCACGTTGGCCACAGTTGTaGGGCAGCCAAACACTCCTTCAGGGAAATGGGAAG +
Preference number: 6 (lower is better)
Translates to: GTLPLSPRWPQL*GSQTLLQGNGK
Trigger: CTTCCCATTTCCCTGAAGGAGTGTTTGGCTGCCCCACAACTGTGGCCAACGTGGAGACAGTGGCAGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CAA 72 bp GTCAGGAGGCCCAGAGTGCTCTGGGGCCATGAGGGATaGGGCCAGAAGCTACAGAATCTTGGGTCTCCCTAT +
Preference number: 6 (lower is better)
Translates to: VRRPRVLWGHEG*GQKLQNLGSPY
Trigger: ATAGGGAGACCCAAGATTCTGTAGCTTCTGGCCCAATCCCTCATGGCCCCAGAGCACTCTGGGCCTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528314.1
ENST00000528377.1
CDS CAA 72 bp GAACCTTTCAGCCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCGTGTCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: EPFSLQSWRPYR*VKIRSSSVSPL
Trigger: CAGCGGCGACACGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGCTGAAAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529867.5
CDS CAA 72 bp CCAGGATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTaGTCTTGTACCAGTCACCTCGACTCAGGGAACCTC +
Preference number: 6 (lower is better)
Translates to: PGSSRAPSAGSP*SCTSHLDSGNL
Trigger: GAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530638.1
CDS GCA 72 bp CAAGGAGAGAATGAAAGACTAGGGGTCTTCACAACCTaGAAAACTTCCGCCAGGCCGAGGACGTGTCGCCGC +
Preference number: 6 (lower is better)
Translates to: QGENERLGVFTT*KTSARPRTCRR
Trigger: GCGGCGACACGTCCTCGGCCTGGCGGAAGTTTTGCAGGTTGTGAAGACCCCTAGTCTTTCATTCTCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526138.5
ENST00000528548.5
CDS GCA 72 bp CATAGCCCGATCCTCATGACTACGTTGCAATTATTCTaGCCAGTGCGAGCCCTGCCAGACTGTGGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: HSPILMTTLQLF*PVRALPDCGLP
Trigger: GGGAAGCCCACAGTCTGGCAGGGCTCGCACTGGGCAGAATAATTGCAACGTAGTCATGAGGATCGGGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CAA 72 bp GCACTGTCTCACCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: ALSHLQSWRPYR*VKIRSSSFSEP
Trigger: TGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTGAGACAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526138.5
ENST00000528377.1
ENST00000534139.5
CDS CAA 72 bp GACTCAGGGAACCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: DSGNLQSWRPYR*VKIRSSSFSEP
Trigger: TGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTTCCCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530638.1
CDS CAA 72 bp ATCCAGTCGGGCCCCTTCAGCAGGATCTCCTTTGTCTaGTACCAGTCACCTCGACTCAGGGAACCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: IQSGPFSRISFV*YQSPRLREPPV
Trigger: GACTGGAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530638.1
CDS CAA 90 bp GGGTGGTTGACATGGCCAGAGATGTTGAATAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCAGCAAACCAGGTACCTCCACGGCGG +
Preference number: 6 (lower is better)
Translates to: GWLTWPEMLNSLVPE*RSLPKPANQVPPRR
Trigger: CCGCCGTGGAGGTACCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS TCA 72 bp GGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCCGCGCGGGAAGCGA +
Preference number: 6 (lower is better)
Translates to: GENPVFILQRAK*GFLGCCPRGKR
Trigger: TCGCTTCCCGCGCGGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529927.5
CDS TCA 72 bp CAGGGAACCTCCAGTCATGGCGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCTTCAGCGAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: QGTSSHGGRTGW*KSGLHPSASQM
Trigger: CATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530638.1
CDS TCA 72 bp TACACTGGCCACAGCTCTCGTGCTTATAGAACTCAATaGGGCGGGCGATGGCTTTCACGATGTCCGTCTGGG +
Preference number: 6 (lower is better)
Translates to: YTGHSSRAYRTQ*GGRWLSRCPSG
Trigger: CCCAGACGGACATCGTGAAAGCCATCGCCCGCCTCATTGAGTTCTATAAGCACGAGAGCTGTGGCCAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531250.1
ENST00000534352.1
CDS GCA 72 bp GTGTGTCCCAGGGTCCTGCACCCATGGCAGAGCCCCTaGTCTAATATCCCCTTATCATTCTTATCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: VCPRVLHPWQSP*SNIPLSFLSLL
Trigger: CAGCAGGGATAAGAATGATAAGGGGATATTAGAGCAGGGGCTCTGCCATGGGTGCAGGACCCTGGGACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526770.5
CDS CCA 72 bp AAGAGCACTTTTCAGCCACTTCAGGGCGCAGAGCAGTaGACGGGAAATCAGGAGGTGCGCATCCCTAAATGG +
Preference number: 6 (lower is better)
Translates to: KSTFQPLQGAEQ*TGNQEVRIPKW
Trigger: CCATTTAGGGATGCGCACCTCCTGATTTCCCGTCCACTGCTCTGCGCCCTGAAGTGGCTGAAAAGTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524876.5
ENST00000526138.5
ENST00000528328.1
ENST00000528548.5
ENST00000532260.1
CDS CCA 72 bp CCCAACACACTAAGGGCACTGTCTCACCTCCAGTCATaGCGGCCGTACAGGTTGGTGAAAATCCGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: PNTLRALSHLQS*RPYRLVKIRSS
Trigger: TGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTGAGACAGTGCCCTTAGTGTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526138.5
ENST00000528377.1
ENST00000534139.5
CDS CCA 72 bp TACACCAGCAGCATTAGGAGCCCTGGAAGGAGGCTTTaGGAGCCAAGTCCCATTTGGGATGCATGCAGGACT +
Preference number: 6 (lower is better)
Translates to: YTSSIRSPGRRL*EPSPIWDACRT
Trigger: AGTCCTGCATGCATCCCAAATGGGACTTGGCTCCCAAAGCCTCCTTCCAGGGCTCCTAATGCTGCTGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524838.5
ENST00000528377.1
CDS CAA 72 bp GAACCTTTCAGCCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: EPFSLQSWRPYR*VKIRSSSFSEP
Trigger: TGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGCTGAAAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000528314.1
ENST00000528328.1
ENST00000528548.5
ENST00000529927.5
ENST00000530014.5
ENST00000530103.5
ENST00000532244.5
ENST00000532343.5
ENST00000647561.1
CDS CAA 72 bp AGTCAGGCAGGTCATAGCCCGATCCTCATGACTACGTaGCAATTATTCTGCCCAGTGCGAGCCCTGCCAGAC +
Preference number: 6 (lower is better)
Translates to: SQAGHSPILMTT*QLFCPVRALPD
Trigger: GTCTGGCAGGGCTCGCACTGGGCAGAATAATTGCAACGTAGTCATGAGGATCGGGCTATGACCTGCCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS CAA 90 bp CGACTCAGGGAACCTTTCAGCCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATGAGGTT +
Preference number: 6 (lower is better)
Translates to: RLREPFSLQSWRPYR*VKIRSSSFSEPNEV
Trigger: AACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGCTGAAAGGTTCCCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000528314.1
ENST00000528328.1
ENST00000528548.5
ENST00000529927.5
ENST00000530014.5
ENST00000530103.5
ENST00000532244.5
ENST00000532343.5
ENST00000647561.1
CDS CAA 90 bp AGTCACCTCGACTCAGGGAACCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATGAGGTT +
Preference number: 6 (lower is better)
Translates to: SHLDSGNLQSWRPYR*VKIRSSSFSEPNEV
Trigger: AACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTTCCCTGAGTCGAGGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530638.1
CDS CAA 90 bp GGAGTGAAAAGTCAGGCAGGTCATAGCCCGATCCTCATGACTACGTaGCAATTATTCTGCCCAGTGCGAGCCCTGCCAGACTGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: GVKSQAGHSPILMTT*QLFCPVRALPDCGL
Trigger: AAGCCCACAGTCTGGCAGGGCTCGCACTGGGCAGAATAATTGCAACGTAGTCATGAGGATCGGGCTATGACCTGCCTGACTTTTCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647561.1
CDS TCA 72 bp CTTTCAGCCTCCAGTCATGGCGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCTTCAGCGAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: LSASSHGGRTGW*KSGLHPSASQM
Trigger: CATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000524838.5
ENST00000524876.5
ENST00000525086.5
ENST00000528314.1
ENST00000528328.1
ENST00000528548.5
ENST00000529927.5
ENST00000530014.5
ENST00000530103.5
ENST00000532244.5
ENST00000532343.5
ENST00000647561.1
CDS TCA 72 bp GGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTAGATACCCGCGCGGG +
Preference number: 6 (lower is better)
Translates to: GENPVFILQRAK*GFLGCCRYPRG
Trigger: CCCGCGCGGGTATCTACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415352.6
CDS TCA 72 bp GGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCTCGGCCGAAGAGGC +
Preference number: 6 (lower is better)
Translates to: GENPVFILQRAK*GFLGCCLGRRG
Trigger: GCCTCTTCGGCCGAGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524876.5
ENST00000526138.5
ENST00000528548.5
CDS TCA 72 bp TGTCTCACCTCCAGTCATGGCGGCCGTACAGGTTGGTaGAAATCCGGTCTTCATCCTTCAGCGAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: CLTSSHGGRTGW*KSGLHPSASQM
Trigger: CATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526138.5
ENST00000528377.1
ENST00000534139.5
CDS TCA 72 bp GGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCGTGTCGCCGCTGAAACGC +
Preference number: 6 (lower is better)
Translates to: GENPVFILQRAK*GFLGCVSPLKR
Trigger: GCGTTTCAGCGGCGACACGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524838.5
ENST00000530638.1
ENST00000532244.5
ENST00000534139.5
CDS TCA 72 bp CCTCTTCCACCTTGCTTTATCTCAGGCTGCAGGAACTaGGACCTGAGTGCTGGCAAGAGGGTTTTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: PLPPCFISGCRN*DLSAGKRVFWE
Trigger: CTCCCAGAAAACCCTCTTGCCAGCACTCAGGTCTCAGTTCCTGCAGCCTGAGATAAAGCAAGGTGGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531250.1
CDS GCA 72 bp ATAGCCAGAGCCACAAGCATTCTTGCCAATCAGACCTaGCTCATAGGCCTCTCGGATGGCCACCTGCAGATT +
Preference number: 6 (lower is better)
Translates to: IARATSILANQT*LIGLSDGHLQI
Trigger: AATCTGCAGGTGGCCATCCGAGAGGCCTATGAGGCAGGTCTGATTGGCAAGAATGCTTGTGGCTCTGGCTAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000529927.5
ENST00000532244.5
ENST00000532303.5
ENST00000532343.5
ENST00000647561.1
CDS CCA 72 bp GGTCTTCATCCTTCAGCGAGCCAAATGAGGTTTTCTTaGGTGCTGTCTAGGGAGACAAAGGGTCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: GLHPSASQMRFS*VLSRETKGQEA
Trigger: GGCCTCCTGACCCTTTGTCTCCCTAGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528314.1
ENST00000528377.1
CDS CAA 90 bp ACACTAAGGGCACTGTCTCACCTCCAGTCATGGCGGCCGTACAGGTaGGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATGAGGTT +
Preference number: 6 (lower is better)
Translates to: TLRALSHLQSWRPYR*VKIRSSSFSEPNEV
Trigger: AACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACCAACCTGTACGGCCGCCATGACTGGAGGTGAGACAGTGCCCTTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526138.5
ENST00000528377.1
ENST00000534139.5
CDS TCA 72 bp GGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCGTGTCGCCGCTGAA +
Preference number: 6 (lower is better)
Translates to: GENPVFILQRAK*GFLGCCRVAAE
Trigger: TTCAGCGGCGACACGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322776.11
ENST00000525086.5
ENST00000533075.5
ENST00000647561.1
CDS CAA 72 bp GGCACAGACATCTCCTCCTCCACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTGAATAGTTTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: GTDISSSTVQGW*TWPEMLNSLVP
Trigger: AGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGAGGAGGAGATGTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 90 bp ATCTCCTCCTCCACAGTGCAAGGGTGGTTGACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAGTTGCGTTCTCTGCCAAAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ISSSTVQGWLTWPEM*NSLVPELRSLPKPA
Trigger: TGCTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGAGGAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 90 bp TCCACAGTGCAAGGGTGGTTGACATGGCCAGAGATGTTGAATAGTTaGGTGCCTGAGTTGCGTTCTCTGCCAAAGCCAGCAAACCAGGTA +
Preference number: 6 (lower is better)
Translates to: STVQGWLTWPEMLNS*VPELRSLPKPANQV
Trigger: TACCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 90 bp TCTTTCAAGGGCACAGACATCTCCTCCTCCACAGTGCAAGGGTGGTaGACATGGCCAGAGATGTTGAATAGTTTGGTGCCTGAGTTGCGT +
Preference number: 6 (lower is better)
Translates to: SFKGTDISSSTVQGW*TWPEMLNSLVPELR
Trigger: ACGCAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGAGGAGGAGATGTCTGTGCCCTTGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 72 bp GACATCTCCTCCTCCACAGTGCAAGGGTGGTTGACATaGCCAGAGATGTTGAATAGTTTGGTGCCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: DISSSTVQGWLT*PEMLNSLVPEL
Trigger: CAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGAGGAGGAGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 72 bp AAGGGCACAGACATCTCCTCCTCCACAGTGCAAGGGTaGTTGACATGGCCAGAGATGTTGAATAGTTTGGTG +
Preference number: 6 (lower is better)
Translates to: KGTDISSSTVQG*LTWPEMLNSLV
Trigger: CACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGAGGAGGAGATGTCTGTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CAA 72 bp TCCACAGTGCAAGGGTGGTTGACATGGCCAGAGATGTaGAATAGTTTGGTGCCTGAGTTGCGTTCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: STVQGWLTWPEM*NSLVPELRSLP
Trigger: TGGCAGAGAACGCAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGTCAACCACCCTTGCACTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS TCA 72 bp GGTGAAAATCCGGTCTTCATCCTTCAGCGAGCCAAATaGGGTTTTCTTGGGTGCTGTCTAGGGAGACAAAGG +
Preference number: 6 (lower is better)
Translates to: GENPVFILQRAK*GFLGCCLGRQR
Trigger: CCTTTGTCTCCCTAGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGGATGAAGACCGGATTTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528314.1
ENST00000528377.1
CDS TCA 72 bp AACACCTCAGAACAACTGTGCTGGGTGAGGGGTGTGTaGGTGCACACTGAACACCTTCTCATCTGTCTACAT +
Preference number: 6 (lower is better)
Translates to: NTSEQLCWVRGV*VHTEHLLICLH
Trigger: ATGTAGACAGATGAGAAGGTGTTCAGTGTGCACTCACACACCCCTCACCCAGCACAGTTGTTCTGAGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524838.5
ENST00000528377.1
CDS CAA 72 bp ACATGGCCAGAGATGTTGAATAGTTTGGTGCCTGAGTaGCGTTCTCTGCCAAAGCCAGCAAACCAGGTACCT +
Preference number: 6 (lower is better)
Translates to: TWPEMLNSLVPE*RSLPKPANQVP
Trigger: AGGTACCTGGTTTGCTGGCTTTGGCAGAGAACGCAACTCAGGCACCAAACTATTCAACATCTCTGGCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322776.11
ENST00000415352.6
ENST00000526169.1
ENST00000526770.5
ENST00000527355.5
ENST00000529927.5
ENST00000532303.5
ENST00000533919.5
ENST00000647561.1
CDS CCA 72 bp GTAAACAAACCTCGCATGTCGCCTTCTGCTGGGTCCTaGTGTGTTCCACTTTCTATAGATTCGGCGTTTAGT +
Preference number: 6 (lower is better)
Translates to: VNKPRMSPSAGS*CVPLSIDSAFS
Trigger: ACTAAACGCCGAATCTATAGAAAGTGGAACACACCAGGACCCAGCAGAAGGCGACATGCGAGGTTTGTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647561.1