Pregenerated sensors for NDUFB7 (Homo sapiens)
Ensembl gene IDs: ENSG00000099795Ensembl transcript IDs: ENST00000215565.3, ENST00000593353.5
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTTGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTaGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACA | + |
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Preference number: 1 (lower is better) Translates to: PLANSAAFFSRRFFR*SSLRSRSNSFMRIT Trigger: TGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| 3UTR CAA 90 bp | CCCTACAGGGCCACCTTGGGGTCCACTTCCCCGGGTCCCTGGCCTTaGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PYRATLGSTSPGPWP*ANSAAFFSRRFFRW Trigger: CCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGGCCAGGGACCCGGGGAAGTGGACCCCAAGGTGGCCCTGTAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCCCGCCGCTTCTTCCGCTGGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCACAGTCGTGCCGCTCCTaGTTGCAGGCCAGGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SPAASSAGAASAPAQTPSQSCRS*LQARKL Trigger: CAACTTCCTGGCCTGCAAGCAGGAGCGGCACGACTG...TGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCGGCGGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCGCCGCTTCTTCCGCTGGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCACTGAAGGCTTTTATTTaGCTGGTCCATAGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPAASSAGAASAPAQTPSLKAFI*LVHRVG Trigger: CCCCACCCTATGGACCAGTCAAATAAAAGCCTTCAG...TGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCGGCGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| 3UTR GCA 72 bp | GTCCACTTCCCCGGGTCCCTGGCCTTTGGCCAACTCTaGCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: VHFPGSLAFGQL*RLLLPPLLPLE Trigger: CTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGGCCAGGGACCCGGGGAAGTGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| 3UTR CCA 72 bp | TACAGGGCCACCTTGGGGTCCACTTCCCCGGGTCCCTaGCCTTTGGCCAACTCTGCCGCCTTCTTCTCCCGC | + |
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Preference number: 3 (lower is better) Translates to: YRATLGSTSPGP*PLANSAAFFSR Trigger: GCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGGCCAGGGACCCGGGGAAGTGGACCCCAAGGTGGCCCTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| 3UTR GCA 72 bp | GCTGGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATaGGCATCACATAGTCGCGGTGCTCGCAGTAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: AGAASAPAQTPS*ASHSRGARSSP Trigger: GGGACTACTGCGAGCACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| 3UTR CCA 72 bp | AACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTaGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATG | + |
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Preference number: 3 (lower is better) Translates to: NSAAFFSRRFFR*SSLRSRSNSFM Trigger: CATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CCA 90 bp | GTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAGGAACCTACAGGGCCACCTTaGGGTCCACTTCCCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VAVLAVVPVVPLLLAGQEPTGPP*GPLPRV Trigger: GACCCGGGGAAGTGGACCCCAAGGTGGCCCTGTAGG...TTCCTGGCCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | CCTTTGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGGAGCAGCGTGGGCCCCCATGGCTaGAGTCGCTGCAGATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PLANSAAFFSRRFFRWSSVGPHG*SRCRSL Trigger: CAGGGATCTGCAGCGACTGCAGCCATGGGGGCCCAC...GCTGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | GCCTTTGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGGAGCAGGGGAAGGTTGGCATCTaGAGGGGGTCGGGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: AFGQLCRLLLPPLLPLEQGKVGI*RGSGST Trigger: GGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCC...CTGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CCA 90 bp | GGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACATAGTCGCGGTCGCCGCTTCTTCCGCTaGAGCAGCCTCCGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GAASAPAQTPSCASHSRGRRFFR*SSLRSR Trigger: GCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCGGCG...ACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | AGTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAGGACACCATCGCGCTCCTTaGGTTCGGGGAAGCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SRGARSSPSRAAPACRPGHHRAP*VRGSRS Trigger: ACTACGGCTTCCCCGAACGCAAGGAGCGCGATGGTG...TCCTGGCCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CCA 90 bp | AGTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAGGAGGGGAAGCCGTAGTCTaGCGGGAAGGTTGGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SRGARSSPSRAAPACRPGGEAVV*REGWHL Trigger: CAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCC...TCCTGGCCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | TTTGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGGAGCAGCCTGTCGCTGCAGATCCCTaGAGCAGCCGAGGGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: FGQLCRLLLPPLLPLEQPVAADP*SSRGSP Trigger: AGGTGACCCTCGGCTGCTGCAGGGATCTGCAGCGAC...AGGCTGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | TTTGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGGAGCAGCCTCATGGCTGCAGTCGCTaGAGATCCCTGCAGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: FGQLCRLLLPPLLPLEQPHGCSR*RSLQQP Trigger: CGGCTGCTGCAGGGATCTGCAGCGACTGCAGCCATG...AGGCTGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | CATAGTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAAGCTGGAGCCTCAGCTaGGCGTCCATCATCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HSRGARSSPSRAAPACRPSWSLS*ASIISC Trigger: GCAGGAGATGATGGACGCGCAGCTGAGGCTCCAGCT...TGGCCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACTATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | TTTGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGGAGCAGCCTGCCTTTGGCCAACTCTaGCGCCTTCTTCTCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: FGQLCRLLLPPLLPLEQPAFGQL*RLLLPP Trigger: CGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGGC...AGGCTGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | CATAGTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAGCGTCCATCATCTCCTaGTGTGTGGCCACCATCGCG | + |
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Preference number: 4 (lower is better) Translates to: HSRGARSSPSRAAPACRPASIIS*CVATIA Trigger: CGCGATGGTGGCCACACAGCAGGAGATGATGGACGC...TGGCCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACTATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTCATGCGCATCACATAGTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGGTCTGGCGGGAAGGTTaGCATCTGCAGGGGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LLHAHHIVAVLAVVPVVPVWREG*HLQGVG Trigger: CCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGAC...CGGCACGACTGGGACTACTGCGAGCACCGCGACTATGTGATGCGCATGAAGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CCA 90 bp | CGCTTCTTCCGCTGGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCGACTGGTCCATAGGGTaGGGGGTGCACCCCCTACAG | + |
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Preference number: 4 (lower is better) Translates to: RFFRWSSLRSRSNSFMRIDWSIG*GVHPLQ Trigger: CTGTAGGGGGTGCACCCCCCACCCTATGGACCAGTC...GATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | CGCTTCTTCCGCTGGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCCAGTCGTGCCGCTCCTaGTTGCAGGCCAGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: RFFRWSSLRSRSNSFMRIQSCRS*LQARKL Trigger: CAACTTCCTGGCCTGCAAGCAGGAGCGGCACGACTG...GATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CCA 90 bp | TCTCCCGCCGCTTCTTCCGCTGGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCAGGCCAGGAAGTTaGGGAAGCTGTCACGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SPAASSAGAASAPAQTPSCRPGS*GSCHAC Trigger: GCAAGCGTGACAGCTTCCCCAACTTCCTGGCCTGCA...TGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGCGGCGGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CCA 90 bp | TCCGCTCCCGCTCAAACTCCTTCATGCGCATCACATAGTCGCGGTGCTCGCAGTTCATCTCCTGCTGTGTaGCCACCATCGCGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SAPAQTPSCASHSRGARSSSPAV*PPSRSL Trigger: CAAGGAGCGCGATGGTGGCCACACAGCAGGAGATGA...ACTGCGAGCACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR TCA 90 bp | CCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACATAGTCGCGGTGCTCGCACTGAAGGCTTTTATTTaGCTGGTCCATAGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PPLPLKLLHAHHIVAVLALKAFI*LVHRVG Trigger: CCCCACCCTATGGACCAGTCAAATAAAAGCCTTCAG...TGCGAGCACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACATAGTCGCGGTGGCTCAAACTCCTTCATaGGCATCACATAGTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: EQPPLPLKLLHAHHIVAVAQTPS*ASHSRG Trigger: ACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGC...CACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS CCA 90 bp | CCACCGAGGCATCGCCCAGGTAGCGCCGGACCAGGTGGGCCCCCATaGCTGCAGTCGCTGCAGATCCCTGCAGCAGCCGAGGGTCACCTA | + |
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Preference number: 5 (lower is better) Translates to: PPRHRPGSAGPGGPP*LQSLQIPAAAEGHL Trigger: TAGGTGACCCTCGGCTGCTGCAGGGATCTGCAGCGACTGCAGCCATGGGGGCCCACCTGGTCCGGCGCTACCTGGGCGATGCCTCGGTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000215565.3 ENST00000593353.5 |
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| CDS CCA 90 bp | CTCGCGCTCCTTGCGTTCGGGGAAGCCGTAGTCTGGCGGGAAGGTTaGCATCTGCAGGGGGTCGGGCTCCACCGAGGCATCGCCCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LALLAFGEAVVWREG*HLQGVGLHRGIAQV Trigger: TACCTGGGCGATGCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAGGAGCGCGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000215565.3 |
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| CDS CCA 90 bp | TGTGGCCACCATCTCGCGCTCCTTGCGTTCGGGGAAGCCGTAGTCTaGCGGGAAGGTTGGCATCTGCAGGGGGTCGGGCTCCACCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: CGHHLALLAFGEAVV*REGWHLQGVGLHRG Trigger: GCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAGGAGCGCGAGATGGTGGCCACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000215565.3 |
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| CDS CCA 90 bp | TGTGTGGCCACCATCGCGCTCCTTGCGTTCGGGGAAGCCGTAGTCTaGCGGGAAGGTTGGCATCTGCAGGGGGTCGGGCTCCACCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: CVATIALLAFGEAVV*REGWHLQGVGLHRG Trigger: GCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAGGAGCGCGATGGTGGCCACACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CAA 90 bp | AGTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAGGACCCTACAGGGCCACCTaGGGGTCCACTTCCCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: SRGARSSPSRAAPACRPGPYRAT*GSTSPG Trigger: ACCCGGGGAAGTGGACCCCAAGGTGGCCCTGTAGGG...TCCTGGCCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS CCA 90 bp | ATCGCGCTCCTTGCGTTCGGGGAAGCCGTAGTCTGGCGGGAAGGTTaGCATCTGCAGGGGGTCGGGCTCCACCGAGGCATCGCCCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: IALLAFGEAVVWREG*HLQGVGLHRGIAQV Trigger: TACCTGGGCGATGCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAGGAGCGCGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CAA 90 bp | GCTTCTTCCGCTGGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACCGGGTCCCTGGCCTTaGGCCAACTCTGCCGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ASSAGAASAPAQTPSCASPGPWP*ANSAAF Trigger: GAAGGCGGCAGAGTTGGCCAAAGGCCAGGGACCCGG...TGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCCAGCGGAAGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CAA 90 bp | GGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACATAGTCGCGGTAGTCTGGCGGGAAGGTaGGCATCTGCAGGGGGTCGG | + |
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Preference number: 5 (lower is better) Translates to: GAASAPAQTPSCASHSRGSLAGR*ASAGGR Trigger: CCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACT...ACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CAA 90 bp | GGCCTTTGGCCAACTCTGCCGCCTTCTTCTCCCGCCGCTTCTTCCGCTGGAGCAGGGAAGCTGTCACGCTaGCACTTGAGCAGCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: GLWPTLPPSSPAASSAGAGKLSR*HLSSRM Trigger: CATCCGGCTGCTCAAGTGCAAGCGTGACAGCTTCCC...TGCTCCAGCGGAAGAAGCGGCGGGAGAAGAAGGCGGCAGAGTTGGCCAAAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CAA 90 bp | AGTCGCGGTGCTCGCAGTAGTCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAGGATTGCAGGCCAGGAAGTaGGGGAAGCTGTCACGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SRGARSSPSRAAPACRPGLQARK*GKLSRL Trigger: CAAGCGTGACAGCTTCCCCAACTTCCTGGCCTGCAA...TCCTGGCCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACATAGTCGCGGTGCTGTCACGCTTGCACTaGAGCAGCCGGATGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: EQPPLPLKLLHAHHIVAVLSRLH*SSRMRW Trigger: CCACCTCATCCGGCTGCTCAAGTGCAAGCGTGACAG...CACCGCGACTATGTGATGCGCATGAAGGAGTTTGAGCGGGAGCGGAGGCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS GCA 72 bp | GCCCAGGTAGCGCCGGACCAGGTGGGCCCCCATGGCTaGAGTCGCTGCAGATCCCTGCAGCAGCCGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: AQVAPDQVGPHG*SRCRSLQQPRV Trigger: GACCCTCGGCTGCTGCAGGGATCTGCAGCGACTGCAGCCATGGGGGCCCACCTGGTCCGGCGCTACCTGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000215565.3 ENST00000593353.5 |
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| CDS CAA 90 bp | TCTCGCGCTCCTTGCGTTCGGGGAAGCCGTAGTCTGGCGGGAAGGTaGGCATCTGCAGGGGGTCGGGCTCCACCGAGGCATCGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SRAPCVRGSRSLAGR*ASAGGRAPPRHRPG Trigger: ACCTGGGCGATGCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAGGAGCGCGAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000215565.3 |
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| CDS CAA 90 bp | CATCGCGCTCCTTGCGTTCGGGGAAGCCGTAGTCTGGCGGGAAGGTaGGCATCTGCAGGGGGTCGGGCTCCACCGAGGCATCGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HRAPCVRGSRSLAGR*ASAGGRAPPRHRPG Trigger: ACCTGGGCGATGCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAGGAGCGCGATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS GCA 72 bp | CGCAGCTGGAGCCTCAGCTGCGCGTCCATCATCTCCTaGTGTGTGGCCACCATCGCGCTCCTTGCGTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RSWSLSCASIIS*CVATIALLAFG Trigger: CCCGAACGCAAGGAGCGCGATGGTGGCCACACAGCAGGAGATGATGGACGCGCAGCTGAGGCTCCAGCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593353.5 |
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| CDS CCA 72 bp | CTTGCGTTCGGGGAAGCCGTAGTCTGGCGGGAAGGTTaGCATCTGCAGGGGGTCGGGCTCCACCGAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LAFGEAVVWREG*HLQGVGLHRGI Trigger: GATGCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000215565.3 ENST00000593353.5 |
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| CDS CAA 72 bp | CCTTGCGTTCGGGGAAGCCGTAGTCTGGCGGGAAGGTaGGCATCTGCAGGGGGTCGGGCTCCACCGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PCVRGSRSLAGR*ASAGGRAPPRH Trigger: ATGCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACTACGGCTTCCCCGAACGCAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000215565.3 ENST00000593353.5 |
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| CDS GCA 72 bp | CGCAGCTGGAGCCTCAGCTGCGCGTCCATCATCTCCTaGTGTGTGGCCACCATCTCGCGCTCCTTGCGTTCG | + |
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Preference number: 6 (lower is better) Translates to: RSWSLSCASIIS*CVATISRSLRS Trigger: CGAACGCAAGGAGCGCGAGATGGTGGCCACACAGCAGGAGATGATGGACGCGCAGCTGAGGCTCCAGCTGCG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000215565.3 |
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| CDS CCA 72 bp | GGAGCCTCAGCTGCGCGTCCATCATCTCCTGCTGTGTaGCCACCATCTCGCGCTCCTTGCGTTCGGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GASAARPSSPAV*PPSRAPCVRGS Trigger: GCTTCCCCGAACGCAAGGAGCGCGAGATGGTGGCCACACAGCAGGAGATGATGGACGCGCAGCTGAGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000215565.3 |
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| CDS CAA 72 bp | TCCCAGTCGTGCCGCTCCTGCTTGCAGGCCAGGAAGTaGGGGAAGCTGTCACGCTTGCACTTGAGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SQSCRSCLQARK*GKLSRLHLSSR Trigger: CCGGCTGCTCAAGTGCAAGCGTGACAGCTTCCCCAACTTCCTGGCCTGCAAGCAGGAGCGGCACGACTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000215565.3 ENST00000593353.5 |
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| CDS CAA 72 bp | TGCTTGCAGGCCAGGAAGTTGGGGAAGCTGTCACGCTaGCACTTGAGCAGCCGGATGAGGTGGTGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: CLQARKLGKLSR*HLSSRMRWWAQ Trigger: CTGCGCCCACCACCTCATCCGGCTGCTCAAGTGCAAGCGTGACAGCTTCCCCAACTTCCTGGCCTGCAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000215565.3 ENST00000593353.5 |
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