Pregenerated sensors for NDUFAF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000123545

Ensembl transcript IDs: ENST00000316149.8, ENST00000489477.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	GAAGAAACTCAATCTCCAAGAAGATATAGTCTCCCAAAGATCCCCCAAGTAGTATGTGCTCAGTCATGCTaGCATGCACTTATGAAATAT	+
Preference number: 2 (lower is better) Translates to: EETQSPRRYSLPKIPQVVCAQSC*HALMKY Trigger: ATATTTCATAAGTGCATGTCAGCATGACTGAGCACA...TACTACTTGGGGGATCTTTGGGAGACTATATCTTCTTGGAGATTGAGTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316149.8
3UTR-3UTR CCA 90 bp	GAAGAAACTCAATCTCCAAGAAGATATAGTCTCCCAAAGATCCCCCAAGTAGTAAAGCAGAAATTCCCATaGGACTTACCTATCTGTCAA	+
Preference number: 2 (lower is better) Translates to: EETQSPRRYSLPKIPQVVKQKFP*DLPICQ Trigger: TTGACAGATAGGTAAGTCCCATGGGAATTTCTGCTT...TACTACTTGGGGGATCTTTGGGAGACTATATCTTCTTGGAGATTGAGTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316149.8
CDS-3UTR CCA 90 bp	GAAGAAACTCAATCTCCAAGAAGATATAGTCTCCCAAAGATCCCCCAAGTAGTAGGTTCAGGCCGCACGTaGGAACACCGGCGCAGGACA	+
Preference number: 4 (lower is better) Translates to: EETQSPRRYSLPKIPQVVGSGRT*EHRRRT Trigger: TGTCCTGCGCCGGTGTTCCCACGTGCGGCCTGAACC...TACTACTTGGGGGATCTTTGGGAGACTATATCTTCTTGGAGATTGAGTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316149.8
CDS-3UTR GCA 90 bp	GAAGAAACTCAATCTCCAAGAAGATATAGTCTCCCAAAGATCCCCCAAGTAGTACTCCTCATAACATTATaGGCTCAGGTTCAGGCCGCA	+
Preference number: 4 (lower is better) Translates to: EETQSPRRYSLPKIPQVVLLITL*AQVQAA Trigger: TGCGGCCTGAACCTGAGCGCATAATGTTATGAGGAG...TACTACTTGGGGGATCTTTGGGAGACTATATCTTCTTGGAGATTGAGTTTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316149.8
CDS CAA 72 bp	GCAGCTTTTACTTTTCCCATAATTATGGTCACATTGTaGCTCATTTGTTTAATGGCTGTGTCCTTCACAACA	+
Preference number: 6 (lower is better) Translates to: AAFTFPIIMVTL*LICLMAVSFTT Trigger: TGTTGTGAAGGACACAGCCATTAAACAAATGAGCAACAATGTGACCATAATTATGGGAAAAGTAAAAGCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489477.1
CDS CAA 72 bp	TCAGCAGCTTTTACTTTTCCCATAATTATGGTCACATaGTTGCTCATTTGTTTAATGGCTGTGTCCTTCACA	+
Preference number: 6 (lower is better) Translates to: SAAFTFPIIMVT*LLICLMAVSFT Trigger: TGTGAAGGACACAGCCATTAAACAAATGAGCAACAATGTGACCATAATTATGGGAAAAGTAAAAGCTGCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489477.1

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