Pregenerated sensors for NDUFA6-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000237037, ENSG00000280613, ENSG00000280811Ensembl transcript IDs: ENST00000417327.5, ENST00000434834.5, ENST00000439129.5, ENST00000536447.6, ENST00000547929.6, ENST00000595777.5, ENST00000600968.5, ENST00000608974.5, ENST00000609499.5, ENST00000610250.5, ENST00000610797.1, ENST00000613829.4, ENST00000614321.4, ENST00000617009.4, ENST00000617396.4, ENST00000621190.1, ENST00000625400.2, ENST00000625506.2, ENST00000625765.2, ENST00000626120.2, ENST00000626132.2, ENST00000626405.1, ENST00000627053.2, ENST00000627124.2, ENST00000627171.2, ENST00000627199.2, ENST00000627751.2, ENST00000628060.2, ENST00000628284.2, ENST00000628314.1, ENST00000628365.2, ENST00000628993.2, ENST00000629186.2, ENST00000629320.2, ENST00000629422.2, ENST00000629715.2, ENST00000630051.2, ENST00000630060.2, ENST00000630947.1, ENST00000631059.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGTCGCTCGGCGTCCCCGGCGCCAGCTCACGACCCAGCGACCTCCTaGGGCCCGAGCGTCCCCTGGCGGCAACGCCGGCTCGTTAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: SRSASPAPAHDPATS*GPSVPWRQRRLVRA Trigger: CGCTCTAACGAGCCGGCGTTGCCGCCAGGGGACGCTCGGGCCGCAGGAGGTCGCTGGGTCGTGAGCTGGCGCCGGGGACGCCGAGCGACT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000608974.5 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS GCA 90 bp | CTCTCCTGCGCTCGGGGTCCCGCCACGAGGAGGTTCTTCAAGGCCTaGGCGCCCACGGACACTACCAAGGAGCGCGGCGGGCAGCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: LSCARGPATRRFFKA*APTDTTKERGGQPD Trigger: ATCCGGCTGCCCGCCGCGCTCCTTGGTAGTGTCCGTGGGCGCGCAGGCCTTGAAGAACCTCCTCGTGGCGGGACCCCGAGCGCAGGAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000613829.4 ENST00000614321.4 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS GCA 90 bp | GACACCTCTCCTCGGGGTCCCGCCACGAGGAGGTTCTTCAAGGCCTaGGCGCCCACGGACACTACCAAGGAGCGCGGCGGGCAGCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: DTSPRGPATRRFFKA*APTDTTKERGGQPD Trigger: ATCCGGCTGCCCGCCGCGCTCCTTGGTAGTGTCCGTGGGCGCGCAGGCCTTGAAGAACCTCCTCGTGGCGGGACCCCGAGGAGAGGTGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000608974.5 ENST00000625506.2 ENST00000625765.2 |
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| CDS CCA 90 bp | GCGCCAGCTCACGACCCAGCGACCTCCTGCGGCCCGAGCGTCCCCTaGCGGCAACGCCGGCTCGTTAGAGCGAGCGACAGATGGTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: APAHDPATSCGPSVP*RQRRLVRASDRWCS Trigger: ACTACACCATCTGTCGCTCGCTCTAACGAGCCGGCGTTGCCGCCAGGGGACGCTCGGGCCGCAGGAGGTCGCTGGGTCGTGAGCTGGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000608974.5 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS GCA 90 bp | GAGATCCAGGGCTCGGGATGCGAATGTCCCTGTCTACGATGGGGCTaGCGTTACAGCCTTCCTCCCGGGGCTCTGGAGACGCGCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: EIQGSGCECPCLRWG*RYSLPPGALETRQL Trigger: GAGCTGGCGCGTCTCCAGAGCCCCGGGAGGAAGGCTGTAACGGCAGCCCCATCGTAGACAGGGACATTCGCATCCCGAGCCCTGGATCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629186.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS CCA 90 bp | TTTTCAGAGATCCAGGGCTCGGGATGCGAATGTCCCTGTCTACGATaGGGCTGCCGTTACAGCCTTCCTCCCGGGGCTCTGGAGACGCGC | + |
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Preference number: 5 (lower is better) Translates to: FSEIQGSGCECPCLR*GCRYSLPPGALETR Trigger: GCGCGTCTCCAGAGCCCCGGGAGGAAGGCTGTAACGGCAGCCCCATCGTAGACAGGGACATTCGCATCCCGAGCCCTGGATCTCTGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629186.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS GCA 90 bp | GCTAAGGAAGAGTTGGTTTACAGAAAAGTAAGTATATCCTGGCCCTaGAGAAAGCCGCCAGGCGGCAGGACAAGCCCCACCGCAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: AKEELVYRKVSISWP*RKPPGGRTSPTAAQ Trigger: CTGGGCTGCGGTGGGGCTTGTCCTGCCGCCTGGCGGCTTTCTGCAGGGCCAGGATATACTTACTTTTCTGTAAACCAACTCTTCCTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000595777.5 ENST00000626120.2 ENST00000629186.2 |
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| CDS TCA 90 bp | CCGTTACAGCCTTCCTCCCGGGGCTCTGGAGACGCGCCAGCTCTTTaGCACCTCTCCTGCGCTAAGGAAGAGTTGGTTTACAGAAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: PLQPSSRGSGDAPAL*HLSCAKEELVYRKV Trigger: TACTTTTCTGTAAACCAACTCTTCCTTAGCGCAGGAGAGGTGTCAAAGAGCTGGCGCGTCTCCAGAGCCCCGGGAGGAAGGCTGTAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000595777.5 ENST00000626120.2 ENST00000629186.2 |
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| CDS GCA 90 bp | AGCTTCCAAATTCTGGGCTGGTTTTCAGAGATCCAGGGCTCGGGATaGGAATGTCCCTGTCTACGATGGGGCTGCCGTTACAGCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SFQILGWFSEIQGSG*ECPCLRWGCRYSLP Trigger: AGGAAGGCTGTAACGGCAGCCCCATCGTAGACAGGGACATTCGCATCCCGAGCCCTGGATCTCTGAAAACCAGCCCAGAATTTGGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629186.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS CCA 90 bp | TCCTGCGCTAAGGAAGAGTTGGTTTACAGAAAAGTAAGTATATCCTaGCCCTGCAGAAAGCCGCCAGGCGGCAGGACAAGCCCCACCGCA | + |
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Preference number: 5 (lower is better) Translates to: SCAKEELVYRKVSIS*PCRKPPGGRTSPTA Trigger: TGCGGTGGGGCTTGTCCTGCCGCCTGGCGGCTTTCTGCAGGGCCAGGATATACTTACTTTTCTGTAAACCAACTCTTCCTTAGCGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000595777.5 ENST00000626120.2 ENST00000629186.2 |
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| CDS TCA 90 bp | TCGAAGCTGCCTGAGGTAGTCCCCTCTGAGGAACAGGAACAAGCATaGAGAGCAATGCACAGAGATCCAGAGACCTGGAGACGCCGTCAA | + |
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Preference number: 5 (lower is better) Translates to: SKLPEVVPSEEQEQA*RAMHRDPETWRRRQ Trigger: TTGACGGCGTCTCCAGGTCTCTGGATCTCTGTGCATTGCTCTTCATGCTTGTTCCTGTTCCTCAGAGGGGACTACCTCAGGCAGCTTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627171.2 ENST00000631059.2 |
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| CDS TCA 90 bp | TGGCCTGACCGTCTCCCCTGTGGGCAGGGCTGTCTACATTTGTCCTaGGATCTCTTCTGGTGGGAACAGCACTTTCCTCAGGAAAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: WPDRLPCGQGCLHLS*DLFWWEQHFPQESL Trigger: CAAACTTTCCTGAGGAAAGTGCTGTTCCCACCAGAAGAGATCTCAGGACAAATGTAGACAGCCCTGCCCACAGGGGAGACGGTCAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626405.1 |
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| CDS TCA 90 bp | TCGAAGCTGCCTGAGGTAGTACCCTCTGAGGAACAGGAACAAGCATaGAGAGCAATGCACAGAGATCCAGAGACCTGGAGACGCCGTCAA | + |
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Preference number: 5 (lower is better) Translates to: SKLPEVVPSEEQEQA*RAMHRDPETWRRRQ Trigger: TTGACGGCGTCTCCAGGTCTCTGGATCTCTGTGCATTGCTCTTCATGCTTGTTCCTGTTCCTCAGAGGGTACTACCTCAGGCAGCTTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617009.4 |
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| CDS CCA 90 bp | ACTGCTGTCCTCCACGTCTGTCCTCACCGACATAATGGGCTGGGCTaGGCACACAGGCAGTGCCCAAGAGTTTCTAATGAGCATATGATT | + |
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Preference number: 5 (lower is better) Translates to: TAVLHVCPHRHNGLG*AHRQCPRVSNEHMI Trigger: AATCATATGCTCATTAGAAACTCTTGGGCACTGCCTGTGTGCCCAGCCCAGCCCATTATGTCGGTGAGGACAGACGTGGAGGACAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439129.5 |
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| CDS GCA 90 bp | TTGAAGCCTAGAGGTGAAGGTTGTAGTGAGCCGAGATTGCATCATTaGACAATGGAGGGGAGCCACCAGCCTGGGCAACAAGAGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: LKPRGEGCSEPRLHH*TMEGSHQPGQQEEI Trigger: GATTTCCTCTTGTTGCCCAGGCTGGTGGCTCCCCTCCATTGTGCAATGATGCAATCTCGGCTCACTACAACCTTCACCTCTAGGCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000617009.4 ENST00000621190.1 ENST00000626405.1 ENST00000627171.2 ENST00000628314.1 ENST00000631059.2 |
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| CDS CCA 90 bp | CAGAATGGACGATCTAAAGTTCCTTCCAGCTTCCAAATTCTGGGCTaGTTTTCAGAGATCCAGGGCTCGGGATGCGAATGTCCCTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: QNGRSKVPSSFQILG*FSEIQGSGCECPCL Trigger: TAGACAGGGACATTCGCATCCCGAGCCCTGGATCTCTGAAAACCAGCCCAGAATTTGGAAGCTGGAAGGAACTTTAGATCGTCCATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000600968.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000628365.2 ENST00000629186.2 ENST00000629320.2 ENST00000629715.2 ENST00000630060.2 |
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| CDS CCA 90 bp | ACACTCAGAATGGACGATCTAAAGTTCCTTCCAGCTTCCAAATTCTaGGCTGGTTTTCAGAGATCCAGGGCTCGGGATGCGAATGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: TLRMDDLKFLPASKF*AGFQRSRARDANVP Trigger: AGGGACATTCGCATCCCGAGCCCTGGATCTCTGAAAACCAGCCCAGAATTTGGAAGCTGGAAGGAACTTTAGATCGTCCATTCTGAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000600968.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000628365.2 ENST00000629186.2 ENST00000629320.2 ENST00000629715.2 ENST00000630060.2 |
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| CDS GCA 72 bp | GCGTCCCCGGCGCCAGCTCACGACCCAGCGACCTCCTaGGGCCCGAGCGTCCCCTGGCGGCAACGCCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ASPAPAHDPATS*GPSVPWRQRRL Trigger: GAGCCGGCGTTGCCGCCAGGGGACGCTCGGGCCGCAGGAGGTCGCTGGGTCGTGAGCTGGCGCCGGGGACGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000608974.5 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS GCA 72 bp | GCTCGGGGTCCCGCCACGAGGAGGTTCTTCAAGGCCTaGGCGCCCACGGACACTACCAAGGAGCGCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: ARGPATRRFFKA*APTDTTKERGG Trigger: CCCGCCGCGCTCCTTGGTAGTGTCCGTGGGCGCGCAGGCCTTGAAGAACCTCCTCGTGGCGGGACCCCGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000613829.4 ENST00000614321.4 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS GCA 72 bp | CCTCGGGGTCCCGCCACGAGGAGGTTCTTCAAGGCCTaGGCGCCCACGGACACTACCAAGGAGCGCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: PRGPATRRFFKA*APTDTTKERGG Trigger: CCCGCCGCGCTCCTTGGTAGTGTCCGTGGGCGCGCAGGCCTTGAAGAACCTCCTCGTGGCGGGACCCCGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000608974.5 ENST00000625506.2 ENST00000625765.2 |
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| CDS CAA 72 bp | GCCTTCCTCCCGGGGCTCTGGAGACGCGCCAGCTCTTaGACACCTCTCCTGCGCTCGGGGTCCCGCCACGAG | + |
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Preference number: 6 (lower is better) Translates to: AFLPGLWRRASS*TPLLRSGSRHE Trigger: CTCGTGGCGGGACCCCGAGCGCAGGAGAGGTGTCAAAGAGCTGGCGCGTCTCCAGAGCCCCGGGAGGAAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000613829.4 ENST00000614321.4 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS CCA 72 bp | GATGGGGCTGCCGTTACAGCCTTCCTCCCGGGGCTCTaGAGACGCGCCAGCTCTTTGACACCTCTCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: DGAAVTAFLPGL*RRASSLTPLLR Trigger: GCGCAGGAGAGGTGTCAAAGAGCTGGCGCGTCTCCAGAGCCCCGGGAGGAAGGCTGTAACGGCAGCCCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000613829.4 ENST00000614321.4 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629186.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS CCA 72 bp | GATGGGGCTGCCGTTACAGCCTTCCTCCCGGGGCTCTaGAGACGCGCCAGCTCTTTGACACCTCTCCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: DGAAVTAFLPGL*RRASSLTPLLG Trigger: CCCGAGGAGAGGTGTCAAAGAGCTGGCGCGTCTCCAGAGCCCCGGGAGGAAGGCTGTAACGGCAGCCCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608974.5 ENST00000625506.2 ENST00000625765.2 |
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| CDS GCA 72 bp | GGCTCGGGATGCGAATGTCCCTGTCTACGATGGGGCTaGCGTTACAGCCTTCCTCCCGGGGCTCTGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: GSGCECPCLRWG*RYSLPPGALET Trigger: CGTCTCCAGAGCCCCGGGAGGAAGGCTGTAACGGCAGCCCCATCGTAGACAGGGACATTCGCATCCCGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629186.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS CCA 72 bp | ATCCAGGGCTCGGGATGCGAATGTCCCTGTCTACGATaGGGCTGCCGTTACAGCCTTCCTCCCGGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IQGSGCECPCLR*GCRYSLPPGAL Trigger: CAGAGCCCCGGGAGGAAGGCTGTAACGGCAGCCCCATCGTAGACAGGGACATTCGCATCCCGAGCCCTGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629186.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS TCA 72 bp | CCTTCCTCCCGGGGCTCTGGAGACGCGCCAGCTCTTTaGCACCTCTCCTGCGCTAAGGAAGAGTTGGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: PSSRGSGDAPAL*HLSCAKEELVY Trigger: GTAAACCAACTCTTCCTTAGCGCAGGAGAGGTGTCAAAGAGCTGGCGCGTCTCCAGAGCCCCGGGAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000595777.5 ENST00000626120.2 ENST00000629186.2 |
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| CDS CCA 72 bp | TGGCGGCAACGCCGGCTCGTTAGAGCGAGCGACAGATaGTGTAGTCCAAAGGCCAAGCGGCGTTTCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: WRQRRLVRASDR*CSPKAKRRFCR Trigger: TCTACAGAAACGCCGCTTGGCCTTTGGACTACACCATCTGTCGCTCGCTCTAACGAGCCGGCGTTGCCGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000439129.5 ENST00000627751.2 ENST00000628060.2 |
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| CDS GCA 72 bp | ATTCTGGGCTGGTTTTCAGAGATCCAGGGCTCGGGATaGGAATGTCCCTGTCTACGATGGGGCTGCCGTTAC | + |
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Preference number: 6 (lower is better) Translates to: ILGWFSEIQGSG*ECPCLRWGCRY Trigger: GTAACGGCAGCCCCATCGTAGACAGGGACATTCGCATCCCGAGCCCTGGATCTCTGAAAACCAGCCCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000417327.5 ENST00000439129.5 ENST00000536447.6 ENST00000595777.5 ENST00000608974.5 ENST00000613829.4 ENST00000614321.4 ENST00000625506.2 ENST00000625765.2 ENST00000626120.2 ENST00000626132.2 ENST00000627751.2 ENST00000628060.2 ENST00000629186.2 ENST00000629320.2 ENST00000630060.2 |
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| CDS TCA 72 bp | CCTCTTGGGCTCTATGACCAAACCCAAGAAGAGCACTaGGGCCCAGCTAAGTCTGGGAGTTCAGTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: PLGLYDQTQEEH*GPAKSGSSVHR Trigger: CCTGTGCACTGAACTCCCAGACTTAGCTGGGCCTCAGTGCTCTTCTTGGGTTTGGTCATAGAGCCCAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000547929.6 ENST00000610250.5 ENST00000627053.2 ENST00000629422.2 ENST00000630051.2 |
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| CDS TCA 72 bp | CGTCTCCCCTGTGGGCAGGGCTGTCTACATTTGTCCTaGGATCTCTTCTGGTGGGAACAGCACTTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RLPCGQGCLHLS*DLFWWEQHFPQ Trigger: CTGAGGAAAGTGCTGTTCCCACCAGAAGAGATCTCAGGACAAATGTAGACAGCCCTGCCCACAGGGGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626405.1 |
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| CDS TCA 72 bp | CATCTCCCCTGTGGGCAGGGCTGTCTACATTTGTCCTaGGATCTCTTCTGGTGGGAACAGCACTTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HLPCGQGCLHLS*DLFWWEQHFPQ Trigger: CTGAGGAAAGTGCTGTTCCCACCAGAAGAGATCTCAGGACAAATGTAGACAGCCCTGCCCACAGGGGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628314.1 |
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| CDS GCA 72 bp | AGAGGTGAAGGTTGTAGTGAGCCGAGATTGCATCATTaGACAATGGAGGGGAGCCACCAGCCTGGGCAACAA | + |
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Preference number: 6 (lower is better) Translates to: RGEGCSEPRLHH*TMEGSHQPGQQ Trigger: TTGTTGCCCAGGCTGGTGGCTCCCCTCCATTGTGCAATGATGCAATCTCGGCTCACTACAACCTTCACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000617009.4 ENST00000621190.1 ENST00000626405.1 ENST00000627171.2 ENST00000628314.1 ENST00000631059.2 |
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| CDS TCA 72 bp | TTGCAGTCCAGCCTAGGTGAGTCTCACTCTGACCTATaGGAGCGGAGAACACTGAGATATCTTGCCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: LQSSLGESHSDL*ERRTLRYLAHG Trigger: GCCATGGGCAAGATATCTCAGTGTTCTCCGCTCTCATAGGTCAGAGTGAGACTCACCTAGGCTGGACTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000434834.5 ENST00000439129.5 ENST00000610797.1 ENST00000613829.4 ENST00000627199.2 ENST00000627751.2 ENST00000628060.2 ENST00000628284.2 |
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| CDS TCA 72 bp | CCTGAGGTAGTCCCCTCTGAGGAACAGGAACAAGCATaGAGAGCAATGCACAGAGATCCAGAGACCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PEVVPSEEQEQA*RAMHRDPETWR Trigger: TCTCCAGGTCTCTGGATCTCTGTGCATTGCTCTTCATGCTTGTTCCTGTTCCTCAGAGGGGACTACCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627171.2 ENST00000631059.2 |
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| CDS CCA 72 bp | AAGGTTGTAGTGAGCCGAGATTGCATCATTGCACAATaGAGGGGAGCCACCAGCCTGGGCAACAAGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: KVVVSRDCIIAQ*RGATSLGNKRK Trigger: TTTCCTCTTGTTGCCCAGGCTGGTGGCTCCCCTCCATTGTGCAATGATGCAATCTCGGCTCACTACAACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000617009.4 ENST00000621190.1 ENST00000626405.1 ENST00000627171.2 ENST00000628314.1 ENST00000631059.2 |
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| CDS TCA 72 bp | CCTGAGGTAGTACCCTCTGAGGAACAGGAACAAGCATaGAGAGCAATGCACAGAGATCCAGAGACCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PEVVPSEEQEQA*RAMHRDPETWR Trigger: TCTCCAGGTCTCTGGATCTCTGTGCATTGCTCTTCATGCTTGTTCCTGTTCCTCAGAGGGTACTACCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617009.4 |
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| CDS TCA 72 bp | AGCTCGGCAGCTGCCCTCCCACAAAAGACAGGATTTTaGAAGCAGCAAGAGAGAAGAGACGTATCAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SSAAALPQKTGF*KQQERRDVSGS Trigger: ACTACCTGATACGTCTCTTCTCTCTTGCTGCTTTCAAAATCCTGTCTTTTGTGGGAGGGCAGCTGCCGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000617009.4 ENST00000621190.1 ENST00000626405.1 ENST00000627171.2 ENST00000628314.1 ENST00000631059.2 |
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| CDS CAA 72 bp | TACCATATCAGTGTCAGGCAGCTTATCCACCTCCTCTaGGGCTCTATGACCAAACCCAAGAAGAGCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: YHISVRQLIHLL*GSMTKPKKSTE Trigger: CTCAGTGCTCTTCTTGGGTTTGGTCATAGAGCCCAAGAGGAGGTGGATAAGCTGCCTGACACTGATATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000547929.6 ENST00000609499.5 ENST00000610250.5 ENST00000617396.4 ENST00000625400.2 ENST00000627053.2 ENST00000627124.2 ENST00000628993.2 ENST00000629422.2 ENST00000630051.2 ENST00000630947.1 |
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| CDS CAA 90 bp | CTGGGGGTCGTGACCAAAGAGGCCAGTCTTGATGACGCTAGAAATTaGCAGATAATCCTTTTACCATATCAGTGTCAGGCAGCTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: LGVVTKEASLDDARN*QIILLPYQCQAAYP Trigger: TGGATAAGCTGCCTGACACTGATATGGTAAAAGGATTATCTGCAAATTTCTAGCGTCATCAAGACTGGCCTCTTTGGTCACGACCCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000547929.6 ENST00000610250.5 ENST00000627053.2 ENST00000629422.2 ENST00000630051.2 |
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| CDS CAA 90 bp | GTCTCCCCTGTGGGCAAAGAGGCCAGTCTTGATGACGCTAGAAATTaGCAGATAATCCTTTTACCATATCAGTGTCAGGCAGCTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: VSPVGKEASLDDARN*QIILLPYQCQAAYP Trigger: TGGATAAGCTGCCTGACACTGATATGGTAAAAGGATTATCTGCAAATTTCTAGCGTCATCAAGACTGGCCTCTTTGCCCACAGGGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628993.2 |
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| CDS CAA 90 bp | ATCTCCCCTGTGGGCAAAGAGGCCAGTCTTGATGACGCTAGAAATTaGCAGATAATCCTTTTACCATATCAGTGTCAGGCAGCTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: ISPVGKEASLDDARN*QIILLPYQCQAAYP Trigger: TGGATAAGCTGCCTGACACTGATATGGTAAAAGGATTATCTGCAAATTTCTAGCGTCATCAAGACTGGCCTCTTTGCCCACAGGGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000609499.5 ENST00000625400.2 |
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| CDS TCA 72 bp | CAACATTGCCTGCTCTTCAGAAGAACTTTTAGTCTCTaGCCTATGAGAGCGGAGAACACTGAGATATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QHCLLFRRTFSL*PMRAENTEISC Trigger: GCAAGATATCTCAGTGTTCTCCGCTCTCATAGGTCAGAGACTAAAAGTTCTTCTGAAGAGCAGGCAATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000595777.5 ENST00000626120.2 ENST00000629186.2 |
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| CDS CAA 72 bp | GTGGGCAAAGAGGCCAGTCTTGATGACGCTAGAAATTaGCAGATAATCCTTTTACCATATCAGTGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VGKEASLDDARN*QIILLPYQCQA Trigger: TGCCTGACACTGATATGGTAAAAGGATTATCTGCAAATTTCTAGCGTCATCAAGACTGGCCTCTTTGCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000609499.5 ENST00000625400.2 ENST00000628993.2 |
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| CDS CAA 72 bp | GTGACCAAAGAGGCCAGTCTTGATGACGCTAGAAATTaGCAGATAATCCTTTTACCATATCAGTGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VTKEASLDDARN*QIILLPYQCQA Trigger: TGCCTGACACTGATATGGTAAAAGGATTATCTGCAAATTTCTAGCGTCATCAAGACTGGCCTCTTTGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000547929.6 ENST00000610250.5 ENST00000627053.2 ENST00000629422.2 ENST00000630051.2 |
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| CDS CAA 72 bp | CTCTTCAAAGAGGCCAGTCTTGATGACGCTAGAAATTaGCAGATAATCCTTTTACCATATCAGTGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LFKEASLDDARN*QIILLPYQCQA Trigger: TGCCTGACACTGATATGGTAAAAGGATTATCTGCAAATTTCTAGCGTCATCAAGACTGGCCTCTTTGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617396.4 ENST00000627124.2 ENST00000630947.1 |
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| CDS CAA 72 bp | TTCTGGTGGGAACAGCACTTTCCTCAGGAAAGTTTGTaGAAAGTCATCAGATCCATGATTGAAAATCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: FWWEQHFPQESL*KVIRSMIENRS Trigger: GCTTCGATTTTCAATCATGGATCTGATGACTTTCAACAAACTTTCCTGAGGAAAGTGCTGTTCCCACCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000626405.1 ENST00000627171.2 ENST00000628314.1 ENST00000631059.2 |
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| CDS CAA 72 bp | CTCTTCTGGTGGGAACAGCACTTTCCTCAGGAAAGTTaGTTGAAAGTCATCAGATCCATGATTGAAAATCGA | + |
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Preference number: 6 (lower is better) Translates to: LFWWEQHFPQES*LKVIRSMIENR Trigger: TCGATTTTCAATCATGGATCTGATGACTTTCAACAAACTTTCCTGAGGAAAGTGCTGTTCCCACCAGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000626405.1 ENST00000627171.2 ENST00000628314.1 ENST00000631059.2 |
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| CDS TCA 72 bp | TCAGGAAAGTTTGTTGAAAGTCATCAGATCCATGATTaGAAATCGAAGCTGCCTTTTAATTTGCTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGKFVESHQIHD*KSKLPFNLLLG Trigger: CCCCAGGAGCAAATTAAAAGGCAGCTTCGATTTTCAATCATGGATCTGATGACTTTCAACAAACTTTCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000621190.1 ENST00000626405.1 ENST00000628314.1 |
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