RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDST2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166507

Ensembl transcript IDs: ENST00000299641.8, ENST00000309979.11, ENST00000398701.2, ENST00000429742.1, ENST00000463410.1, ENST00000465929.1

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTaGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAGAACTGTGGGA +
Preference number: 1 (lower is better)
Translates to: PTSQDDGSKVPSTIM*GTKGSPFICPRTVG
Trigger: TCCCACAGTTCTGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR CCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCCCCCTACACCCTGCCTaGACCCTCTCATTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTPLHPA*TLSFLP
Trigger: GGGGAGGAATGAGAGGGTCCAGGCAGGGTGTAGGGG...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR GCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCCATTCCCCTACACCCTaGCTGGACCCTCTCATTCCT +
Preference number: 2 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPHSPTP*LDPLIP
Trigger: AGGAATGAGAGGGTCCAGGCAGGGTGTAGGGGAATG...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR GCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAACATTCCCCTACACCCTaGCTGGACCCTCTCATTCCT +
Preference number: 2 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEHSPTP*LDPLIP
Trigger: AGGAATGAGAGGGTCCAGGCAGGGTGTAGGGGAATG...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR CCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTACCTAGCACTATTATGTaGGGTACCAAAGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLPSTIM*GTKGSP
Trigger: GGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGG...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR GCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGAAGCAGGGGGCATTTTaGTGGTATGGGAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMKQGAF*WYGRLG
Trigger: TCCCAGCCTCCCATACCAGCAAAATGCCCCCTGCTT...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR CCA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCATTTGTCCCAGAACTGTaGGAAAAGGATACCCTTCCC +
Preference number: 2 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPFVPEL*EKDTLP
Trigger: GGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR GCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGAAGCAGGGGGCATTTTaGTGGTATGGGAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKKQGAF*WYGRLG
Trigger: TCCCAGCCTCCCATACCAGCAAAATGCCCCCTGCTT...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR-3UTR CCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCTTTGTCCCAGAACTGTaGGAAAAGGATACCCTTCCC +
Preference number: 2 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTFVPEL*EKDTLP
Trigger: GGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
3UTR CCA 72 bp CAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTaGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAGA +
Preference number: 3 (lower is better)
Translates to: QDDGSKVPSTIM*GTKGSPFICPR
Trigger: TCTGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGAGGGCCAGGACCAGCTaGCCCACCGCTGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARRARTS*PTAAAV
Trigger: GACTGCAGCAGCGGTGGGGCAGCTGGTCCTGGCCCT...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTAGAGGGGGAGGGGGCCAGGCTCTCCCCTTaGCCCTGGCTGAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPFSAISGLGATEVEGEGARLSP*PWLSAS
Trigger: TGAGGCGCTCAGCCAGGGCCAAGGGGAGAGCCTGGC...CCCCTCCCCCTCTACCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCCAGCTGCCCCACCGCTaGTGCAGTCTCCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RATGRSHCLAKGAIARGPQLPHR*CSLPRA
Trigger: TGCCCTTGGGAGACTGCAGCAGCGGTGGGGCAGCTG...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGGCCGCGTCCCGGGGCTaGCCGGCTTCCCTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRAASRG*PASLLS
Trigger: CGAAAGCAGGGAAGCCGGGCAGCCCCGGGACGCGGC...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR CCA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCGGCCCGACGAAGAACTaGTCCTGGCACTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RATGRSHCLAKGAIARGPGPTKN*SWHCGL
Trigger: GAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGGGCC...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGCTGCCCGGCTTCCCTaGTTTCGGGGCCACGGGCCG +
Preference number: 4 (lower is better)
Translates to: WEKDTLPFSAISGLGATEAARLP*FRGHGP
Trigger: CGGCCCGTGGCCCCGAAAGCAGGGAAGCCGGGCAGC...CTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGGGGCCGAGGTGGAACTaGAGGCCGTGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRGPRWN*RPCRAR
Trigger: CCTGGCCCTGCACGGCCTCCAGTTCCACCTCGGCCC...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGCTGCCCCACCGCTGCTaGAGTCTCCCAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRLPHRC*SLPRAG
Trigger: CCCTGCCCTTGGGAGACTGCAGCAGCGGTGGGGCAG...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTAGAGGGGGAGGGGGGGGATACTCCTCAGTaGTGGTCACCTGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: LPFSAISGLGATEVEGEGGDTPQ*WSPGCP
Trigger: GGGGCATCCAGGTGACCAGCACTGAGGAGTATCCCC...CCCCTCCCCCTCTACCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGATACCTCCGGCCTTTaGTCCGGCCTAGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARDTSGL*SGLDSE
Trigger: CTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATC...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGCGATCAGCAGCAGTATaGGGCGGTGCAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARRSAAV*GGAVPA
Trigger: AGCTGGAACTGCACCGCCTCATACTGCTGCTGATCG...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGCTCTCCACCTCGGATaGTCCGGTCTAGTTCACGAG +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARALHLG*SGLVHE
Trigger: CTCGTGAACTAGACCGGAGCATCCGAGGTGGAGAGC...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCGGGCCGAGGTGGAACTaGAGGCCGTGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTGPRWN*RPCRAR
Trigger: CCTGGCCCTGCACGGCCTCCAGTTCCACCTCGGCCC...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTAGAGGGGGAGGGGAGAGCTGCGTGTGGATaGGGTACACACCCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LPFSAISGLGATEVEGEGRAACG*GTHPSG
Trigger: ACCACTCGGGTGTGTACCCCATCCACACGCAGCTCT...CCCCTCCCCCTCTACCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGAGTGCCAGAGGGGTCTaGGAGGAGGCTGAAATCACC +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARSARGV*EEAEIT
Trigger: GGTGATTTCAGCCTCCTCCCAGACCCCTCTGGCACT...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGAGGGCCAGGACCAGCTaGCCCACCGCTGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPRARTS*PTAAAV
Trigger: GACTGCAGCAGCGGTGGGGCAGCTGGTCCTGGCCCT...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCACAAGACAGCGGTTCTaGAGGGAGCGTAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RATGRSHCLAKGAIARGPTRQRF*RERSAR
Trigger: TCTGGCACTACGCTCCCTGCAGAACCGCTGTCTTGT...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCAGCCAGGCTCTCCCCTTaGCCCTGGCTGAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPARLSP*PWLSAS
Trigger: TGAGGCGCTCAGCCAGGGCCAAGGGGAGAGCCTGGC...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCCAGCTGGCCGAAGGCTaGCAAGAAGCACTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RATGRSHCLAKGAIARGPQLAEG*QEALVH
Trigger: ATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTG...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTAGAGGGGGAGGGGAGCACGGAGCGATTGTaGAACAGGTGTGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: LPFSAISGLGATEVEGEGSTERL*NRCGCM
Trigger: CATGCAGCCACACCTGTTCCACAATCGCTCCGTGCT...CCCCTCCCCCTCTACCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCATCATACCCGGAGGACTaGGCGGCGTCCCCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPSYPED*AASPLS
Trigger: GGACAGCGGGGACGCCGCCCAGTCCTCCGGGTATGA...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR TCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTGGCGGCTGGGGCGTGTaGGATGCAGTAGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCGGWGV*DAVAGQ
Trigger: CTGCCCCGCTACTGCATCTCACACGCCCCAGCCGCC...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGAGAGGCGCTTGCCAGTaGGGTATGCAACAGCATCAA +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARRGACQ*GMQQHQ
Trigger: TTGATGCTGTTGCATACCTCACTGGCAAGCGCCTCT...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCCGGTGCAGTTCCAGCTaGCGAGCTGGGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTRCSSS*RAGRTT
Trigger: GGTGGTACGCCCAGCTCGGCAGCTGGAACTGCACCG...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACCCCTTGGCCCTGGCTaGGCGCCTCACATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPPLGPG*APHIKG
Trigger: ACCTTTGATGTGAGGCGCTCAGCCAGGGCCAAGGGG...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCGAGCAAACTGTTTGTTaGGCCTCATCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RATGRSHCLAKGAIARGPEQTVC*ASSGQP
Trigger: TGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTC...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCAGAAGATTGTGTGAGTaGAGAGGCCACATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RATGRSHCLAKGAIARGPRRLCE*RGHMSA
Trigger: GGCAGACATGTGGCCTCTTCACTCACACAATCTTCT...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCCAGCTGCCCCACCGCTaGTGCAGTCTCCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPQLPHR*CSLPRA
Trigger: TGCCCTTGGGAGACTGCAGCAGCGGTGGGGCAGCTG...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTTCCAGCTGCCGAGCTaGGCGTACCACCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRFQLPS*AYHLPQ
Trigger: TTGTGGAAGGTGGTACGCCCAGCTCGGCAGCTGGAA...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGAGTGCCAGAGGGGTCTaGGAGGAGGCTGAAATCACC +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRSARGV*EEAEIT
Trigger: GGTGATTTCAGCCTCCTCCCAGACCCCTCTGGCACT...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCAAAGGGGAAAGCCCTTaGGCTGGGCGCTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTKGESP*AGRSVG
Trigger: GCCTACTGAGCGCCCAGCTCAAGGGCTTTCCCCTTT...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCGATACCTCCGGCCTTTaGTCCGGCCTAGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTDTSGL*SGLDSE
Trigger: CTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATC...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AGGTACCTAGCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAGGGCCGCGTCGCGGCTaGTCCGCCATCTCCGAGCGA +
Preference number: 4 (lower is better)
Translates to: RYLALLCGVPKEAPLFVPGPRRG*SAISER
Trigger: TCGCTCGGAGATGGCGGAGCAGCCGCGACGCGGCCC...TGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR CCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTACTCTCCCCTTGGCCCTaGCTGAGCGCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLLSPWP*LSASHQ
Trigger: TTGATGTGAGGCGCTCAGCCAGGGCCAAGGGGAGAG...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGAGGCTAGGACTGTCTTaGAAGGGTAGAAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARRLGLS*KGRRIG
Trigger: TCCTATCCTTCTACCCTTCCAAGACAGTCCTAGCCT...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGAGCACGGAGCGATTGTaGAACAGGTGTGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRSTERL*NRCGCM
Trigger: CATGCAGCCACACCTGTTCCACAATCGCTCCGTGCT...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTTGTTGAGCCTCATCTaGTCAGCCAGCACGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRLLSLI*SASTER
Trigger: TCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAA...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCCGGGCAGGGCGGAGATaGGGATACTCCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPRAGRR*GYSSVL
Trigger: CAGCACTGAGGAGTATCCCCATCTCCGCCCTGCCCG...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTTGAGGCTGCTGGGTTaGTACGCAGCTCTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRLRLLG*YAALAH
Trigger: ATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAA...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGATACCCAGGAACTTCTaGATGCTCTCCATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARIPRNF*MLSIEA
Trigger: AGCCTCAATGGAGAGCATCCAGAAGTTCCTGGGTAT...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCGCTGGTATGGGAGGCTaGGACATCAGCCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTAGMGG*DISPDW
Trigger: CCAGTCTGGGCTGATGTCCCAGCCTCCCATACCAGC...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGCTGGATGCTCTCCATTaGGGCTGCTGGGTTGGTACG +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPLDALH*GCWVGT
Trigger: CGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAG...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGCTGCCCCACCGCTGCTaGAGTCTCCCAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKLPHRC*SLPRAG
Trigger: CCCTGCCCTTGGGAGACTGCAGCAGCGGTGGGGCAG...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCAGTCCCCTCGGCCAGGTaGCAACTCAGTGCTATAACG +
Preference number: 4 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPVPSAR*QLSAIT
Trigger: CGTTATAGCACTGAGTTGGCACCTGGCCGAGGGGAC...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTAGAGGGGGAGGGGCTTGCCAGTGAGGTATaGAACAGCATCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPFSAISGLGATEVEGEGLASEV*NSINED
Trigger: ATCTTCGTTGATGCTGTTGCATACCTCACTGGCAAG...CCCCTCCCCCTCTACCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGTGCTGGTCACCTGGATaGCCCACACGGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPCWSPG*PTRISR
Trigger: CCTGGAAATCCGTGTGGGGCATCCAGGTGACCAGCA...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCGGGGATACTCCTCAGTaGTGGTCACCTGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPGDTPQ*WSPGCP
Trigger: GGGGCATCCAGGTGACCAGCACTGAGGAGTATCCCC...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAGCTCTCCACCTCGGATaGTCCGGTCTAGTTCACGAG +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLALHLG*SGLVHE
Trigger: CTCGTGAACTAGACCGGAGCATCCGAGGTGGAGAGC...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGACCAGATATCTTTGTaGCTCTTGTCATCACAGGGA +
Preference number: 4 (lower is better)
Translates to: GGRATGRSHCLAKGAIARDQISL*LLSSQG
Trigger: TCCCTGTGATGACAAGAGGCACAAAGATATCTGGTC...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGAAGCAGGGGGCATTTTaGTGGTATGGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WEKDTLPFSAISGLGATEKQGAF*WYGRLG
Trigger: TCCCAGCCTCCCATACCAGCAAAATGCCCCCTGCTT...CTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTATTCCAGCTGCCGAGCTaGGCGTACCACCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLFQLPS*AYHLPQ
Trigger: TTGTGGAAGGTGGTACGCCCAGCTCGGCAGCTGGAA...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCACTGCGGGCTCAGCTaGCCGAAGGCTGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCHCGLS*PKAGKK
Trigger: CTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTG...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCGGTCCTGTACCACAGTaGGAAGCCGGGCCCGACGAA +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLGPVPQ*EAGPDE
Trigger: TTCGTCGGGCCCGGCTTCCCACTGTGGTACAGGACC...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGTTGTTGAGCCTCATCTaGTCAGCCAGCACGGAGCGA +
Preference number: 4 (lower is better)
Translates to: WEKDTLPFSAISGLGATELLSLI*SASTER
Trigger: TCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAA...CTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCTACACACCCGAGTGGTaGGGGGCCACAGCATACCCC +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLYTPEW*GATAYP
Trigger: GGGGTATGCTGTGGCCCCCCACCACTCGGGTGTGTA...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCAGAGCTGCGTGTGGATaGGGTACACACCCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTRAACG*GTHPSG
Trigger: ACCACTCGGGTGTGTACCCCATCCACACGCAGCTCT...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAACGGGCAGGGCGGAGATaGGGATACTCCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCERAGRR*GYSSVL
Trigger: CAGCACTGAGGAGTATCCCCATCTCCGCCCTGCCCG...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAGCCACGAGGGCACTaGCTGTCCAAGCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTKPRGH*LSKPAQ
Trigger: CTGAGCCGGCTTGGACAGCCAGTGCCCTCGTGGCTT...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCCCCCTACACCCTGCCTaGACCCTCTCATTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTPLHPA*TLSFLP
Trigger: GGGGAGGAATGAGAGGGTCCAGGCAGGGTGTAGGGG...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TTTGTCCCAGAACTGTGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCCCCTACACCCTGCCTaGACCCTCTCATTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FVPELWEKDTLPFSAISGPLHPA*TLSFLP
Trigger: GGGGAGGAATGAGAGGGTCCAGGCAGGGTGTAGGGG...GCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAGGCGGCTGGGGCGTGTaGGATGCAGTAGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTGGWGV*DAVAGQ
Trigger: CTGCCCCGCTACTGCATCTCACACGCCCCAGCCGCC...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGAGAGGCGCTTGCCAGTaGGGTATGCAACAGCATCAA +
Preference number: 4 (lower is better)
Translates to: WEKDTLPFSAISGLGATERGACQ*GMQQHQ
Trigger: TTGATGCTGTTGCATACCTCACTGGCAAGCGCCTCT...CTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGTCTGGGGTCCCACAATaGGGAACTTCGGGAGACGAT +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPSGVPQ*GTSGDD
Trigger: ATCGTCTCCCGAAGTTCCTCATTGTGGGACCCCAGA...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCCTGGATGCTCTCCATTaGGGCTGCTGGGTTGGTACG +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPLDALH*GCWVGT
Trigger: CGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAG...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCAAGAGGCCACATGTCTaGCGGGGCAGCACCATAATG +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTKRPHV*RGSTIM
Trigger: CATTATGGTGCTGCCCCGGCAGACATGTGGCCTCTT...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAACAAGACAGCGGTTCTaGAGGGAGCGTAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLTRQRF*RERSAR
Trigger: TCTGGCACTACGCTCCCTGCAGAACCGCTGTCTTGT...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTACCCAGACTGGAATGCTaGAGTTCTTCCCGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLPRLEC*SSSRSH
Trigger: GTGGCTTCGGGAAGAACTGCAGCATTCCAGTCTGGG...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCAAGCAGGGGGCATTTTaGTGGTATGGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTKQGAF*WYGRLG
Trigger: TCCCAGCCTCCCATACCAGCAAAATGCCCCCTGCTT...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAATGTCTCAGGTCACCATaGCCCCCTGGCCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCECLRSP*PPGPWL
Trigger: AAGCCATGGGCCAGGGGGCCATGGTGACCTGAGACA...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGGGCCCGACGAAGAACTaGTCCTGGCACTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKGPTKN*SWHCGL
Trigger: GAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGGGCC...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGGGTCCTGTACCACAGTaGGAAGCCGGGCCCGACGAA +
Preference number: 4 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMGPVPQ*EAGPDE
Trigger: TTCGTCGGGCCCGGCTTCCCACTGTGGTACAGGACC...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGTACACACCCGAGTGGTaGGGGGCCACAGCATACCCC +
Preference number: 4 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMYTPEW*GATAYP
Trigger: GGGGTATGCTGTGGCCCCCCACCACTCGGGTGTGTA...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTATCAGTGCTGGTCACCTaGATGCCCCACACGGATTTC +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLSVLVT*MPHTDF
Trigger: GAAATCCGTGTGGGGCATCCAGGTGACCAGCACTGA...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGGATACTCCTCAGTGCTaGTCACCTGGATGCCCCACA +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPDTPQC*SPGCPT
Trigger: TGTGGGGCATCCAGGTGACCAGCACTGAGGAGTATC...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCGATACTCCTCAGTGCTaGTCACCTGGATGCCCCACA +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTDTPQC*SPGCPT
Trigger: TGTGGGGCATCCAGGTGACCAGCACTGAGGAGTATC...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGCCCCTTGGCCCTGGCTaGGCGCCTCACATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKPLGPG*APHIKG
Trigger: ACCTTTGATGTGAGGCGCTCAGCCAGGGCCAAGGGG...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTATTCCTGCCCCAGCTGTaGGTATGCACTCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLFLPQL*VCTLHK
Trigger: TTTGTGGAGAGTGCATACTCACAGCTGGGGCAGGAA...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGCTCGGAAAAAGCCAATaGTGCCCACACCATACTCCA +
Preference number: 4 (lower is better)
Translates to: WEKDTLPFSAISGLGATELGKSQ*CPHHTP
Trigger: TGGAGTATGGTGTGGGCATCATTGGCTTTTTCCGAG...CTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCGGTTCATATGTACTATaGTTGGATTGGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: RATGRSHCLAKGAIARGPGSYVL*LDWKMV
Trigger: GACCATCTTCCAATCCAATCATAGTACATATGAACC...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCGGTCTGGGAGGAGGCTaGAATCACCTGATAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTGLGGG*NHLIEG
Trigger: ACCTTCTATCAGGTGATTTCAGCCTCCTCCCAGACC...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCCCCATGGCTTCAGGCTaGAAATCTTGCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPPMASG*KSCQAL
Trigger: GAGAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGG...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTGTCCCCTCGGCCAGGTaGCAACTCAGTGCTATAACG +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCVPSAR*QLSAIT
Trigger: CGTTATAGCACTGAGTTGGCACCTGGCCGAGGGGAC...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCCAGAACTCTTTGCGGTaGTTCAGCAGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTQNSLR*FSSMSS
Trigger: GGACGACATGCTGCTGAAGCACCGCAAAGAGTTCTG...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TTTGTCCCAGAACTGTGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCTGCTGGTCACCTGGATaGCCCACACGGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FVPELWEKDTLPFSAISGCWSPG*PTRISR
Trigger: CCTGGAAATCCGTGTGGGGCATCCAGGTGACCAGCA...GCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAATGGCCCCCTGGCCCATaGCTTCAGGCTGCAAATCTT +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEWPPGP*LQAANL
Trigger: AAGATTTGCAGCCTGAAGCCATGGGCCAGGGGGCCA...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAGTAGGCTGTGCTCGTaGGCTCGGAAAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLSRLCS*ARKKPM
Trigger: CATTGGCTTTTTCCGAGCCCACGAGCACAGCCTACT...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGACGAAGAACTGGTCCTaGCACTGCGGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMTKNWS*HCGLSW
Trigger: CCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGT...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAACATACCCCAGGTCCGTaGGAATCCCATGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEHTPGP*ESHAPE
Trigger: CTCTGGAGCATGGGATTCCCACGGACCTGGGGTATG...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCATACCCCAGGTCCGTaGGAATCCCATGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCHTPGP*ESHAPE
Trigger: CTCTGGAGCATGGGATTCCCACGGACCTGGGGTATG...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TTTGTCCCAGAACTGTGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCAGCCGTGTCCAACACTaGAGGAAGCGCACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: FVPELWEKDTLPFSAISGSRVQH*RKRTKL
Trigger: GAGCTTGGTGCGCTTCCTCCAGTGTTGGACACGGCT...GCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTAGCCGTGTCCAACACTaGAGGAAGCGCACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCSRVQH*RKRTKL
Trigger: GAGCTTGGTGCGCTTCCTCCAGTGTTGGACACGGCT...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGATAGTTCAGAGCAACTaGGTCTCCATGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPIVQSN*VSMGSL
Trigger: CAGCGAGCCCATGGAGACCCAGTTGCTCTGAACTAT...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTTTGTCCCAGAACTGTaGGAAAAGGATACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRFVPEL*EKDTLP
Trigger: GGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCATCACACAGCTCAGTTaGTGGGAGGGCTGGGATTCG +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPITQLS*WEGWDS
Trigger: CGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGAT...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR TCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGTGGGAACTAAGGTCCTaGGTTTGTTCTGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPWELRS*VCSGWS
Trigger: TGACCACCCAGAACAAACTCAGGACCTTAGTTCCCA...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCTCTGGGGTCCCACAATaGGGAACTTCGGGAGACGAT +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTSGVPQ*GTSGDD
Trigger: ATCGTCTCCCGAAGTTCCTCATTGTGGGACCCCAGA...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCCCCATGGCTTCAGGCTaGAAATCTTGCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLPMASG*KSCQAL
Trigger: GAGAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGG...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCACCACCAGAACTCTTTaGGGTGCTTCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTTTRTL*GASAAC
Trigger: ACATGCTGCTGAAGCACCGCAAAGAGTTCTGGTGGT...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCAAGAGGCCACATGTCTaGCGGGGCAGCACCATAATG +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLKRPHV*RGSTIM
Trigger: CATTATGGTGCTGCCCCGGCAGACATGTGGCCTCTT...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TTTGTCCCAGAACTGTGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCAGCCCAGACTGGAATaGTGCAGTTCTTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: FVPELWEKDTLPFSAISGQPRLE*CSSSRS
Trigger: GCTTCGGGAAGAACTGCAGCATTCCAGTCTGGGCTG...GCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCCATTCCCCTACACCCTaGCTGGACCCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLHSPTP*LDPLIP
Trigger: AGGAATGAGAGGGTCCAGGCAGGGTGTAGGGGAATG...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACAGGTAGATCCCACTaGCTGGCTAAAGGGGCCATA +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPTGRSH*LAKGAI
Trigger: TATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGT...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGTGTCTCAGGTCACCATaGCCCCCTGGCCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKCLRSP*PPGPWL
Trigger: AAGCCATGGGCCAGGGGGCCATGGTGACCTGAGACA...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTTCAGTGCTGGTCACCTaGATGCCCCACACGGATTTC +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCSVLVT*MPHTDF
Trigger: GAAATCCGTGTGGGGCATCCAGGTGACCAGCACTGA...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGCACAGGTTTTCTCCTTaGACCAGATATCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRHRFSP*TRYLCA
Trigger: GGCACAAAGATATCTGGTCCAAGGAGAAAACCTGTG...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCCTCAGTGTCCATATCTaGATACCTCCGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTLSVHI*IPPAFA
Trigger: AGCAAAGGCCGGAGGTATCCAGATATGGACACTGAG...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCAGGGCTGTTGAAGAACTaGATCTCCTCAAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPGLLKN*ISSNVL
Trigger: CAGCACATTTGAGGAGATTCAGTTCTTCAACAGCCC...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGAGTTCAGAAAGGGTGTaGTACCCAGGAACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPSSERV*YPGTSG
Trigger: TCCAGAAGTTCCTGGGTATCACACCCTTTCTGAACT...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGGCGCTCAGTAGGCTGTaGTCGTGGGCTCGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKALSRL*SWARKK
Trigger: CTTTTTCCGAGCCCACGAGCACAGCCTACTGAGCGC...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCCCAGGAACTTCTGGATaGTCTCCATTGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLPGTSG*SPLRLL
Trigger: CAGCAGCCTCAATGGAGAGCATCCAGAAGTTCCTGG...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCAGGAACTTCTGGATaGTCTCCATTGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCPGTSG*SPLRLL
Trigger: CAGCAGCCTCAATGGAGAGCATCCAGAAGTTCCTGG...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTACAGGTAGATCCCACTaGCTGGCTAAAGGGGCCATA +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCTGRSH*LAKGAI
Trigger: TATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGT...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAAGGACAGGGATTCCCTTaGGGAGTTTCCTTTACGAGG +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEGQGFP*GVSFTR
Trigger: CCTCGTAAAGGAAACTCCCCAAGGGAATCCCTGTCC...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAAGTACTTCTGTGCAAGTaGGACAGGAGGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEVLLCK*DRRKGL
Trigger: CAGACCCTTCCTCCTGTCCCACTTGCACAGAAGTAC...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCGTAGTCCCTGTTTTCTaGGGTCCCACAATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPVVPVF*GPTMRN
Trigger: GTTCCTCATTGTGGGACCCCAGAAAACAGGGACTAC...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCCTCAGTGTCCATATCTaGATACCTCCGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPLSVHI*IPPAFA
Trigger: AGCAAAGGCCGGAGGTATCCAGATATGGACACTGAG...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCGACATCAGCCCAGACTaGAATGCTGCAGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTDISPD*NAAVLP
Trigger: GGGAAGAACTGCAGCATTCCAGTCTGGGCTGATGTC...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCTCGGAAAAAGCCAATaGTGCCCACACCATACTCCA +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCLGKSQ*CPHHTP
Trigger: TGGAGTATGGTGTGGGCATCATTGGCTTTTTCCGAG...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp AGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTAAAGGGGAAAGCCCTTaGGCTGGGCGCTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RYTAADEEGNLIGLIHSPKGESP*AGRSVG
Trigger: GCCTACTGAGCGCCCAGCTCAAGGGCTTTCCCCTTT...AGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCTGGGAACTAAGGTCCTaGGTTTGTTCTGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTWELRS*VCSGWS
Trigger: TGACCACCCAGAACAAACTCAGGACCTTAGTTCCCA...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTATATCATCATCAAACCTaGGGGTCCGTGTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLYHHQT*GSVCSS
Trigger: TGAACTACACACGGACCCTCAGGTTTGATGATGATA...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TTTGTCCCAGAACTGTGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCATCCCCATTCAATGTaGATGACATTAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FVPELWEKDTLPFSAISGHPHSM*MTLGRP
Trigger: CGGCCTCCCTAATGTCATTCACATTGAATGGGGATG...GCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGTCATACTCGGCTCTATaGGCCACTGTCCGACCTCAT +
Preference number: 4 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMSYSAL*ATVRPH
Trigger: ATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGA...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAAATGGCCACAATTTCCTaGCCCAGCTGTGAGTATGCA +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEMATIS*PSCEYA
Trigger: TGCATACTCACAGCTGGGGCAGGAAATTGTGGCCAT...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AGGTACCTAGCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAGCGCTCAGTAGGCTGTaGTCGTGGGCTCGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RYLALLCGVPKEAPLFVPALSRL*SWARKK
Trigger: CTTTTTCCGAGCCCACGAGCACAGCCTACTGAGCGC...TGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACACAGCATGTCGTCCCCTaGATCCTCCTCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTQHVVP*ILLLCP
Trigger: GGGACAGAGGAGGAGGATGCAGGGGACGACATGCTG...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGTTCAAAGTACTTCTGTaGAAGTGGGACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPFKVLL*KWDRRK
Trigger: CTTCCTCCTGTCCCACTTGCACAGAAGTACTTTGAA...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGCATTCCCCTACACCCTaGCTGGACCCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKHSPTP*LDPLIP
Trigger: AGGAATGAGAGGGTCCAGGCAGGGTGTAGGGGAATG...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACACTCTCCCCTTGGCCCTaGCTGAGCGCCTCACATCAA +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTLSPWP*LSASHQ
Trigger: TTGATGTGAGGCGCTCAGCCAGGGCCAAGGGGAGAG...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAAGTTTCCTTTACGAGGTaGAGACGAGTCCCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEVSFTR*RRVPLA
Trigger: TGCTAAGGGGACTCGTCTCCACCTCGTAAAGGAAAC...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGGGACAGGGATTCCCTTaGGGAGTTTCCTTTACGAGG +
Preference number: 4 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMGQGFP*GVSFTR
Trigger: CCTCGTAAAGGAAACTCCCCAAGGGAATCCCTGTCC...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTTATTATCAGTCAATGTaGGCATGTCCCCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCYYQSM*ACPLGQ
Trigger: CTGGCCGAGGGGACATGCCCACATTGACTGATAATA...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCTATTATCAGTCAATGTaGGCATGTCCCCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTYYQSM*ACPLGQ
Trigger: CTGGCCGAGGGGACATGCCCACATTGACTGATAATA...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGCAGCTGGCCGAAGGCTaGCAAGAAGCACTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKQLAEG*QEALVH
Trigger: ATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTG...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTGTCCTGAGTTTGTTCTaGGTGGTCAACAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCVLSLF*VVNRAS
Trigger: TGAGGCTCTGTTGACCACCCAGAACAAACTCAGGAC...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCGTAGTCCCTGTTTTCTaGGGTCCCACAATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLVVPVF*GPTMRN
Trigger: GTTCCTCATTGTGGGACCCCAGAAAACAGGGACTAC...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCAATAGGAAATCAGTGCTaGCATTGGAAGGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPIGNQC*HWKEQG
Trigger: TCCCTGTTCCTTCCAATGCCAGCACTGATTTCCTAT...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTGCTGGTATGGGAGGCTaGGACATCAGCCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: RYTAADEEGNLIGLIHSPAGMGG*DISPDW
Trigger: CCAGTCTGGGCTGATGTCCCAGCCTCCCATACCAGC...AGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCCCTAGCACTATTATGTaGGGTACCAAAGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTPSTIM*GTKGSP
Trigger: GGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGG...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAACCTAGCACTATTATGTaGGGTACCAAAGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEPSTIM*GTKGSP
Trigger: GGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGG...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAAGCAGGTTCTCATAAATaGCCAAGACATAGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCEAGSHK*PRHSGH
Trigger: ATGGCCGCTATGTCTTGGTCATTTATGAGAACCTGC...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCGGGCTGTTGAAGAACTaGATCTCCTCAAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLGLLKN*ISSNVL
Trigger: CAGCACATTTGAGGAGATTCAGTTCTTCAACAGCCC...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTATACACTGCTGCGGATaGAGAGGGAAATCTCATTGG +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCIHCCG*RGKSHW
Trigger: CCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTAT...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCATACACTGCTGCGGATaGAGAGGGAAATCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTIHCCG*RGKSHW
Trigger: CCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTAT...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGTCATACTCGGCTCTATaGGCCACTGTCCGACCTCAT +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKSYSAL*ATVRPH
Trigger: ATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGA...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACATCAGGCTGCAAATCTTaGCAGGCTCTCCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTSGCKS*QALPLA
Trigger: GGCCAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGA...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGCAGAACTCTTTGCGGTaGTTCAGCAGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKQNSLR*FSSMSS
Trigger: GGACGACATGCTGCTGAAGCACCGCAAAGAGTTCTG...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGTTGGTACGCAGCTCTTaGCCATCCACAATCAGCAAC +
Preference number: 4 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMLVRSS*PSTISN
Trigger: GTTGCTGATTGTGGATGGGCAAGAGCTGCGTACCAA...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCACTGCGGGCTCAGCTaGCCGAAGGCTGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSHCGLS*PKAGKK
Trigger: CTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTG...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGGTACTTCTGTGCAAGTaGGACAGGAGGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKVLLCK*DRRKGL
Trigger: CAGACCCTTCCTCCTGTCCCACTTGCACAGAAGTAC...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCAAGCCACGAGGGCACTaGCTGTCCAAGCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSKPRGH*LSKPAQ
Trigger: CTGAGCCGGCTTGGACAGCCAGTGCCCTCGTGGCTT...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTTTTGTCCCAGAACTGTaGGAAAAGGATACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCFVPEL*EKDTLP
Trigger: GGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAACACAGCTCAGTTGGTaGGAGGGCTGGGATTCGACG +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTTQLSW*EGWDST
Trigger: CGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGT...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR TCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGAGAAGATTGTGTGAGTaGAGAGGCCACATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKRRLCE*RGHMSA
Trigger: GGCAGACATGTGGCCTCTTCACTCACACAATCTTCT...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGATGGCCACAATTTCCTaGCCCAGCTGTGAGTATGCA +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKMATIS*PSCEYA
Trigger: TGCATACTCACAGCTGGGGCAGGAAATTGTGGCCAT...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCGACCAGATATCTTTGTaGCTCTTGTCATCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTDQISL*LLSSQG
Trigger: TCCCTGTGATGACAAGAGGCACAAAGATATCTGGTC...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCAGACTGGAATGCTaGAGTTCTTCCCGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTPRLEC*SSSRSH
Trigger: GTGGCTTCGGGAAGAACTGCAGCATTCCAGTCTGGG...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTCAGCCCAGACTGGAATaGTGCAGTTCTTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RYTAADEEGNLIGLIHSPQPRLE*CSSSRS
Trigger: GCTTCGGGAAGAACTGCAGCATTCCAGTCTGGGCTG...AGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AGGTACCTAGCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAAGTAGGCTGTGCTCGTaGGCTCGGAAAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: RYLALLCGVPKEAPLFVPSRLCS*ARKKPM
Trigger: CATTGGCTTTTTCCGAGCCCACGAGCACAGCCTACT...TGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp ATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGACCGCTGGCAAGAAGCACTaGTTCATATGTACTATGATT +
Preference number: 4 (lower is better)
Translates to: ISSPQLGLILGSMSHCPTAGKKH*FICTMI
Trigger: AATCATAGTACATATGAACCAGTGCTTCTTGCCAGC...GGTCGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TTTGTCCCAGAACTGTGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCACAGGTTTTCTCCTTaGACCAGATATCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: FVPELWEKDTLPFSAISGHRFSP*TRYLCA
Trigger: GGCACAAAGATATCTGGTCCAAGGAGAAAACCTGTG...GCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTATAGGAAATCAGTGCTaGCATTGGAAGGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCIGNQC*HWKEQG
Trigger: TCCCTGTTCCTTCCAATGCCAGCACTGATTTCCTAT...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AGGTACCTAGCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAATAGTTCAGAGCAACTaGGTCTCCATGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RYLALLCGVPKEAPLFVPIVQSN*VSMGSL
Trigger: CAGCGAGCCCATGGAGACCCAGTTGCTCTGAACTAT...TGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTTTGAGGCTGCTGGGTTaGTACGCAGCTCTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RYTAADEEGNLIGLIHSPLRLLG*YAALAH
Trigger: ATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAA...AGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AGGTACCTAGCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAGACATCAGCCCAGACTaGAATGCTGCAGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RYLALLCGVPKEAPLFVPDISPD*NAAVLP
Trigger: GGGAAGAACTGCAGCATTCCAGTCTGGGCTGATGTC...TGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCATGGAGCCCAGGCTaGAAGCGATCAGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSPWSPG*KRSAAV
Trigger: TACTGCTGCTGATCGCTTTCAGCCTGGGCTCCATGG...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAGGTCTGGGAGGAGGCTaGAATCACCTGATAGAAGGT +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTGLGGG*NHLIEG
Trigger: ACCTTCTATCAGGTGATTTCAGCCTCCTCCCAGACC...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGTATCATCATCAAACCTaGGGGTCCGTGTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMYHHQT*GSVCSS
Trigger: TGAACTACACACGGACCCTCAGGTTTGATGATGATA...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCTCAGGCTGCAAATCTTaGCAGGCTCTCCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSSGCKS*QALPLA
Trigger: GGCCAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGA...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGAGGCTAGGACTGTCTTaGAAGGGTAGAAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKRLGLS*KGRRIG
Trigger: TCCTATCCTTCTACCCTTCCAAGACAGTCCTAGCCT...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGCATATGTACTATGATTaGATTGGAAGATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: DISSPQLGLILGSMSHCPHMYYD*IGRWSS
Trigger: ACTGGACCATCTTCCAATCCAATCATAGTACATATG...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTACATATGTACTATGATTaGATTGGAAGATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLHMYYD*IGRWSS
Trigger: ACTGGACCATCTTCCAATCCAATCATAGTACATATG...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCGCTGGCAAGAAGCACTaGTTCATATGTACTATGATT +
Preference number: 4 (lower is better)
Translates to: SSPFNVNDIREAGPQVDPAGKKH*FICTMI
Trigger: AATCATAGTACATATGAACCAGTGCTTCTTGCCAGC...GGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTGGTTCATATGTACTATaGTTGGATTGGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: KDISSPQLGLILGSMSHCGSYVL*LDWKMV
Trigger: GACCATCTTCCAATCCAATCATAGTACATATGAACC...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAGAGCAAACTGTTTGTTaGGCCTCATCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTEQTVC*ASSGQP
Trigger: TGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTC...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACACATCCCCATTCAATGTaGATGACATTAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTHPHSM*MTLGRP
Trigger: CGGCCTCCCTAATGTCATTCACATTGAATGGGGATG...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAGTTTCCTTTACGAGGTaGAGACGAGTCCCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTVSFTR*RRVPLA
Trigger: TGCTAAGGGGACTCGTCTCCACCTCGTAAAGGAAAC...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTGTCCTGAGTTTGTTCTaGGTGGTCAACAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RYTAADEEGNLIGLIHSPVLSLF*VVNRAS
Trigger: TGAGGCTCTGTTGACCACCCAGAACAAACTCAGGAC...AGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR TCA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAAGTTCAGAAAGGGTGTaGTACCCAGGAACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTSSERV*YPGTSG
Trigger: TCCAGAAGTTCCTGGGTATCACACCCTTTCTGAACT...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AGGTACCTAGCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCATTCAAAGTACTTCTGTaGAAGTGGGACAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RYLALLCGVPKEAPLFVPFKVLL*KWDRRK
Trigger: CTTCCTCCTGTCCCACTTGCACAGAAGTACTTTGAA...TGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTCTTGCCAGTGAGGTATaGAACAGCATCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: RYTAADEEGNLIGLIHSPLASEV*NSINED
Trigger: ATCTTCGTTGATGCTGTTGCATACCTCACTGGCAAG...AGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR GCA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCACCACCAGAACTCTTTaGGGTGCTTCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSTTRTL*GASAAC
Trigger: ACATGCTGCTGAAGCACCGCAAAGAGTTCTGGTGGT...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CCA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCATACCCAGGAACTTCTaGATGCTCTCCATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSIPRNF*MLSIEA
Trigger: AGCCTCAATGGAGAGCATCCAGAAGTTCCTGGGTAT...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp CTGGCCCAACCACCGCTCCCACCGGGGGAGGCGGCGCGCCGCCGCTaGTGGCACCCGCTCGGATCCACCGGCTCCGGCCCTAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LAQPPLPPGEAARRR*WHPLGSTGSGPSSR
Trigger: GCGGCTGCTAGGGCCGGAGCCGGTGGATCCGAGCGGGTGCCACCAGCGGCGGCGCGCCGCCTCCCCCGGTGGGAGCGGTGGTTGGGCCAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS GCA 90 bp CAGCCGCGCGACCTGGGTTCCGGGAAATCAAGCGGCCCTCCGCAGTaGCGGGCCGAGCCGCGGCCTCCGAGACGGCGGGCTCCGCGCCCC +
Preference number: 5 (lower is better)
Translates to: QPRDLGSGKSSGPPQ*RAEPRPPRRRAPRP
Trigger: GGGGCGCGGAGCCCGCCGTCTCGGAGGCCGCGGCTCGGCCCGGCACTGCGGAGGGCCGCTTGATTTCCCGGAACCCAGGTCGCGCGGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS CCA 90 bp CACCCGCTCGGATCCACCGGCTCCGGCCCTAGCAGCCGCGCGACCTaGGTTCCGGGAAATCAAGCGGCCCTCCGCAGTGCCGGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: HPLGSTGSGPSSRAT*VPGNQAALRSAGPS
Trigger: GCTCGGCCCGGCACTGCGGAGGGCCGCTTGATTTCCCGGAACCCAGGTCGCGCGGCTGCTAGGGCCGGAGCCGGTGGATCCGAGCGGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS CCA 90 bp GTCCTGTACCACAGTGGGAAGCCGGGCCCGACGAAGAACTGGTCCTaGCACTGCGGGCTCAGCTGGCCGAAGGCTGGCAAGAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: VLYHSGKPGPTKNWS*HCGLSWPKAGKKHW
Trigger: CCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGGGCCCGGCTTCCCACTGTGGTACAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGCCAGCACGGAGCGATaGTGGAACAGGTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GGRATGRSHCLAKGAIARASTER*WNRCGC
Trigger: GCAGCCACACCTGTTCCACAATCGCTCCGTGCTGGC...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 90 bp CAGGTCACCATGGCCCCCTGGCCCATGGCTTCAGGCTGCAAATCTTaGCAGGCTCTCCCCTTGGCCCTGGCTGAGCGCCTCACATCAAAG +
Preference number: 5 (lower is better)
Translates to: QVTMAPWPMASGCKS*QALPLALAERLTSK
Trigger: CTTTGATGTGAGGCGCTCAGCCAGGGCCAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGGCCAGGGGGCCATGGTGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS GCA 90 bp AGGCTGAAAGCGATCAGCAGCAGTATGAGGCGGTGCAGTTCCAGCTaGCGAGCTGGGCGTACCACCTTCCACAACTGGAGCATGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RLKAISSSMRRCSSS*RAGRTTFHNWSMAG
Trigger: CCCCGCCATGCTCCAGTTGTGGAAGGTGGTACGCCCAGCTCGGCAGCTGGAACTGCACCGCCTCATACTGCTGCTGATCGCTTTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 90 bp CCCATGGAGCCCAGGCTGAAAGCGATCAGCAGCAGTATGAGGCGGTaGAGTTCCAGCTGCCGAGCTGGGCGTACCACCTTCCACAACTGG +
Preference number: 5 (lower is better)
Translates to: PMEPRLKAISSSMRR*SSSCRAGRTTFHNW
Trigger: CCAGTTGTGGAAGGTGGTACGCCCAGCTCGGCAGCTGGAACTGCACCGCCTCATACTGCTGCTGATCGCTTTCAGCCTGGGCTCCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 90 bp TACCACAGTGGGAAGCCGGGCCCGACGAAGAACTGGTCCTGGCACTaGGGGCTCAGCTGGCCGAAGGCTGGCAAGAAGCACTGGTTCATA +
Preference number: 5 (lower is better)
Translates to: YHSGKPGPTKNWSWH*GLSWPKAGKKHWFI
Trigger: TATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGGGCCCGGCTTCCCACTGTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 90 bp TTCGACGTCAGGCCTGTCAAGCTCCAGAGCCGCGTTCTTAGCCGCTaGATTTTAGCTTCATACCCGGAGGACTGGGCGGCGTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: FDVRPVKLQSRVLSR*ILASYPEDWAASPL
Trigger: CAGCGGGGACGCCGCCCAGTCCTCCGGGTATGAAGCTAAAATGCAGCGGCTAAGAACGCGGCTCTGGAGCTTGACAGGCCTGACGTCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309979.11
ENST00000398701.2
CDS-3UTR CAA 90 bp CTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTAGAGGGGGAGGGGAAAAGGGGAAAGCCCTaGAGCTGGGCGCTCAGTAGG +
Preference number: 5 (lower is better)
Translates to: LPFSAISGLGATEVEGEGKRGKP*SWALSR
Trigger: CCTACTGAGCGCCCAGCTCAAGGGCTTTCCCCTTTT...CCCCTCCCCCTCTACCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGTAGAGGGGGAGGGGTCCAGGCAGAGGCGCTaGCCAGTGAGGTATGCAACA +
Preference number: 5 (lower is better)
Translates to: LPFSAISGLGATEVEGEGSRQRR*PVRYAT
Trigger: TGTTGCATACCTCACTGGCAAGCGCCTCTGCCTGGA...CCCCTCCCCCTCTACCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS TCA 90 bp AGTCATCACCAGGCAGTGGCCCTGGTTCTAGGCGGCTGGGGCGTGTaGGATGCAGTAGCGGGGCAGAAGGATTCACTTGGTAGTCCCGGA +
Preference number: 5 (lower is better)
Translates to: SHHQAVALVLGGWGV*DAVAGQKDSLGSPG
Trigger: TCCGGGACTACCAAGTGAATCCTTCTGCCCCGCTACTGCATCTCACACGCCCCAGCCGCCTAGAACCAGGGCCACTGCCTGGTGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp TATACAGAGTCCACTTGTCTCAGGTCACCATGGCCCCCTGGCCCATaGCTTCAGGCTGCAAATCTTGCCAGGCTCTCCCCTTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: YTESTCLRSPWPPGP*LQAANLARLSPWPW
Trigger: CCAGGGCCAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGGCCAGGGGGCCATGGTGACCTGAGACAAGTGGACTCTGTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS CCA 90 bp CCCTCTACCTTGCCCAGGATCACACAGCTCAGTTGGTGGGAGGGCTaGGATTCGACGTCAGGCCTGTCAAGCTCCAGAGCCGCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: PSTLPRITQLSWWEG*DSTSGLSSSRAAFL
Trigger: TAAGAACGCGGCTCTGGAGCTTGACAGGCCTGACGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAAGGTAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS CCA 90 bp GGGCAACTATACAGAGTCCACTTGTCTCAGGTCACCATGGCCCCCTaGCCCATGGCTTCAGGCTGCAAATCTTGCCAGGCTCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GQLYRVHLSQVTMAP*PMASGCKSCQALPL
Trigger: CAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGGCCAGGGGGCCATGGTGACCTGAGACAAGTGGACTCTGTATAGTTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS CCA 90 bp GAAGCAGGGGGCAACTATACAGAGTCCACTTGTCTCAGGTCACCATaGCCCCCTGGCCCATGGCTTCAGGCTGCAAATCTTGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EAGGNYTESTCLRSP*PPGPWLQAANLARL
Trigger: GAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGGCCAGGGGGCCATGGTGACCTGAGACAAGTGGACTCTGTATAGTTGCCCCCTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS-3UTR CAA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGGGCAGAAGGATTCACTaGGTAGTCCCGGAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRGRRIH*VVPEPQ
Trigger: TTGGGGCTCCGGGACTACCAAGTGAATCCTTCTGCC...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp AAGCCGGGCCCGACGAAGAACTGGTCCTGGCACTGCGGGCTCAGCTaGCCGAAGGCTGGCAAGAAGCACTGGTTCATATGTACTATGATT +
Preference number: 5 (lower is better)
Translates to: KPGPTKNWSWHCGLS*PKAGKKHWFICTMI
Trigger: AATCATAGTACATATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGGGCCCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp GCCCAGACTGGAATGCTGCAGTTCTTCCCGAAGCCACGAGGGCACTaGCTGTCCAAGCCGGCTCAGCAGCTTCGACAACTCCAAATTATG +
Preference number: 5 (lower is better)
Translates to: AQTGMLQFFPKPRGH*LSKPAQQLRQLQIM
Trigger: CATAATTTGGAGTTGTCGAAGCTGCTGAGCCGGCTTGGACAGCCAGTGCCCTCGTGGCTTCGGGAAGAACTGCAGCATTCCAGTCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp CTTAGAACCTTGCCCAGGATCACACAGCTCAGTTGGTGGGAGGGCTaGGATTCGACGTCAGGCCTGTCAAGCTCCAGAGCCGCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: LRTLPRITQLSWWEG*DSTSGLSSSRAAFL
Trigger: TAAGAACGCGGCTCTGGAGCTTGACAGGCCTGACGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAAGGTTCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS TCA 90 bp GGCTTCAGGCTGCAAATCTTGCCAGGCTCTCCCCTTGGCCCTGGCTaGGCGCCTCACATCAAAGGTCAGCAAAGTTCAATCTCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: GFRLQILPGSPLGPG*APHIKGQQSSISSP
Trigger: AGGGGAAGAGATTGAACTTTGCTGACCTTTGATGTGAGGCGCTCAGCCAGGGCCAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS GCA 90 bp GGAAAAGACGGGACTCAGTGTCCATATCTGGATACCTCCGGCCTTTaGTCCGGCCTAGACAGCGAGTCTTACCACCTTCAAGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GKDGTQCPYLDTSGL*SGLDSESYHLQVPG
Trigger: GCCAGGGACTTGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGTCCCGTCTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp TTCAATCTCTTCCCCTCTACCTTGCCCAGGATCACACAGCTCAGTTaGTGGGAGGGCTGGGATTCGACGTCAGGCCTGTCAAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: FNLFPSTLPRITQLS*WEGWDSTSGLSSSR
Trigger: TCTGGAGCTTGACAGGCCTGACGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAAGGTAGAGGGGAAGAGATTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR CAA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGAAAAGGGGAAAGCCCTaGAGCTGGGCGCTCAGTAGG +
Preference number: 5 (lower is better)
Translates to: DISSPQLGLILGSMSHCPKRGKP*SWALSR
Trigger: CCTACTGAGCGCCCAGCTCAAGGGCTTTCCCCTTTT...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp GGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGGAACCACCAGAACTCTTaGCGGTGCTTCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: GKRIPFPSQPSQAWGLLRNHQNS*RCFSSM
Trigger: CATGCTGCTGAAGCACCGCAAAGAGTTCTGGTGGTT...CCTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTGCCAGCACGGAGCGATaGTGGAACAGGTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: KDISSPQLGLILGSMSHCASTER*WNRCGC
Trigger: GCAGCCACACCTGTTCCACAATCGCTCCGTGCTGGC...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp GGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGTTGGACCAGATATCTTaGTGCCTCTTGTCATCACAG +
Preference number: 5 (lower is better)
Translates to: GGRATGRSHCLAKGAIARLDQIS*CLLSSQ
Trigger: CTGTGATGACAAGAGGCACAAAGATATCTGGTCCAA...CCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CGGGCCACAGGTAGATCCCACTGCCTGGCTAAAGGGGCCATAGCAAGGGGTCCCTCACAGGTTTTCTCCTaGGACCAGATATCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: RATGRSHCLAKGAIARGPSQVFS*DQISLC
Trigger: GCACAAAGATATCTGGTCCAAGGAGAAAACCTGTGA...GGGACCCCTTGCTATGGCCCCTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTGGATACCTCCGGCCTTaGCTCCGGCCTAGACAGCGA +
Preference number: 5 (lower is better)
Translates to: KDISSPQLGLILGSMSHCGYLRP*LRPRQR
Trigger: TCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCC...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCACTCTTCCCCTCTACCTaGCCCAGGATCACACAGCTC +
Preference number: 5 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPLFPST*PRITQL
Trigger: GAGCTGTGTGATCCTGGGCAAGGTAGAGGGGAAGAG...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS GCA 90 bp CCACTGCCAACTTGCCATCCAGCCACCCATGCGAACCTAAATTCATaGCCACCACTAGCTCCTCACAGCAGTCTGACCCCAAACCTTGAC +
Preference number: 5 (lower is better)
Translates to: PLPTCHPATHANLNS*PPLAPHSSLTPNLD
Trigger: GTCAAGGTTTGGGGTCAGACTGCTGTGAGGAGCTAGTGGTGGGCATGAATTTAGGTTCGCATGGGTGGCTGGATGGCAAGTTGGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS CCA 90 bp GTGGGAATCCCATGCTCCAGAGCAAACTGTTTGTTGAGCCTCATCTaGTCAGCCAGCACGGAGCGATTGTGGAACAGGTGTGGCTGCATG +
Preference number: 5 (lower is better)
Translates to: VGIPCSRANCLLSLI*SASTERLWNRCGCM
Trigger: CATGCAGCCACACCTGTTCCACAATCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGAGCATGGGATTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCAGGGACAGGGATTCCCTaGGGGAGTTTCCTTTACGAG +
Preference number: 5 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPGTGIP*GSFLYE
Trigger: CTCGTAAAGGAAACTCCCCAAGGGAATCCCTGTCCC...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 90 bp TGGCTTTACTTACCTCAGTGTCCATATCTGGATACCTCCGGCCTTTaGTCCGGCCTAGACAGCGAGTCTTACCACCTTCAAGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: WLYLPQCPYLDTSGL*SGLDSESYHLQVPG
Trigger: GCCAGGGACTTGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGGTAAGTAAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429742.1
CDS-3UTR CAA 90 bp GACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCCGCTATACAGAGTCCACTaGTCTCAGGTCACCATGGCC +
Preference number: 5 (lower is better)
Translates to: DISSPQLGLILGSMSHCPLYRVH*SQVTMA
Trigger: GGCCATGGTGACCTGAGACAAGTGGACTCTGTATAG...CGGACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp GCTCATACTCGGCTCTATGAGCCACTGTCCGACCTCATCCCCATTCAATGTGAAAGCACTGTGATGATCTaGGCTCGTGGCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: AHTRLYEPLSDLIPIQCESTVMI*ARGRRA
Trigger: TGCCCTCCTGCCACGAGCCAAGATCATCACAGTGCT...TTCACATTGAATGGGGATGAGGTCGGACAGTGGCTCATAGAGCCGAGTATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTGCCCTGTCAGCAGGGTaGGTGAGCACTGTGATGATC +
Preference number: 5 (lower is better)
Translates to: KDISSPQLGLILGSMSHCALSAG*VSTVMI
Trigger: GATCATCACAGTGCTCACCAACCCTGCTGACAGGGC...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CACTGTCCGACCTCATCCCCATTCAATGTGAATGACATTAGGGAGGCCGGGCCAGTTGGTACGCAGCTCTaGCCCATCCACAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: HCPTSSPFNVNDIREAGPVGTQL*PIHNQQ
Trigger: TTGCTGATTGTGGATGGGCAAGAGCTGCGTACCAAC...TGGCCCGGCCTCCCTAATGTCATTCACATTGAATGGGGATGAGGTCGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CCCACCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCATTGAGGCTGCTGGGTaGGTACGCAGCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PTSQDDGSKVPSTIMWGTIEAAG*VRSSCP
Trigger: TGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAAT...GGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS TCA 90 bp GTTCAGAAAGGGTGTGATACCCAGGAACTTCTGGATGCTCTCCATTaGGGCTGCTGGGTTGGTACGCAGCTCTTGCCCATCCACAATCAG +
Preference number: 5 (lower is better)
Translates to: VQKGCDTQELLDALH*GCWVGTQLLPIHNQ
Trigger: CTGATTGTGGATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGAAGTTCCTGGGTATCACACCCTTTCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000429742.1
CDS TCA 90 bp TTCATGCCCACCACTAGCTCCTCACAGCAGTCTGACCCCAAACCTTaGCCCTTTTCTTCAACTTGTCTGCCCAGGGAGGTGGACAGTGAA +
Preference number: 5 (lower is better)
Translates to: FMPTTSSSQQSDPKP*PFSSTCLPREVDSE
Trigger: TTCACTGTCCACCTCCCTGGGCAGACAAGTTGAAGAAAAGGGTCAAGGTTTGGGGTCAGACTGCTGTGAGGAGCTAGTGGTGGGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS CCA 90 bp TCCTGGCACTGCGGGCTCAGCTGGCCGAAGGCTGGCAAGAAGCACTaGTTCATATGTACTATGATTGGATTGGAAGATGGTCCAGTCATC +
Preference number: 5 (lower is better)
Translates to: SWHCGLSWPKAGKKH*FICTMIGLEDGPVI
Trigger: GATGACTGGACCATCTTCCAATCCAATCATAGTACATATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp GACGAAGAACTGGTCCTGGCACTGCGGGCTCAGCTGGCCGAAGGCTaGCAAGAAGCACTGGTTCATATGTACTATGATTGGATTGGAAGA +
Preference number: 5 (lower is better)
Translates to: DEELVLALRAQLAEG*QEALVHMYYDWIGR
Trigger: TCTTCCAATCCAATCATAGTACATATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp GACACAGAATCAGATCCTGGAAGTGGAGAGGGATTCCCCTGCCCCTaGCTTTACTTACCTCAGTGTCCATATCTGGATACCTCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: DTESDPGSGEGFPCP*LYLPQCPYLDTSGL
Trigger: AAGGCCGGAGGTATCCAGATATGGACACTGAGGTAAGTAAAGCCAGGGGCAGGGGAATCCCTCTCCACTTCCAGGATCTGATTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429742.1
CDS-3UTR CAA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCGGGACAGGGATTCCCTaGGGGAGTTTCCTTTACGAG +
Preference number: 5 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLGTGIP*GSFLYE
Trigger: CTCGTAAAGGAAACTCCCCAAGGGAATCCCTGTCCC...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGGCCCTGTCAGCAGGGTaGGTGAGCACTGTGATGATC +
Preference number: 5 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMALSAG*VSTVMI
Trigger: GATCATCACAGTGCTCACCAACCCTGCTGACAGGGC...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGATTGAGGCTGCTGGGTaGGTACGCAGCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMIEAAG*VRSSCP
Trigger: TGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAAT...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCTCTGGATGCTCTCCATaGAGGCTGCTGGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLSGCSP*RLLGWY
Trigger: GTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGA...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 90 bp AGACTTTCTATTTGCCCCACTGCCAACTTGCCATCCAGCCACCCATaGGAACCTAAATTCATGCCCACCACTAGCTCCTCACAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: RLSICPTANLPSSHP*EPKFMPTTSSSQQS
Trigger: AGACTGCTGTGAGGAGCTAGTGGTGGGCATGAATTTAGGTTCGCATGGGTGGCTGGATGGCAAGTTGGCAGTGGGGCAAATAGAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS-3UTR CAA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTCTATACAGAGTCCACTaGTCTCAGGTCACCATGGCC +
Preference number: 5 (lower is better)
Translates to: KDISSPQLGLILGSMSHCLYRVH*SQVTMA
Trigger: GGCCATGGTGACCTGAGACAAGTGGACTCTGTATAG...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp TGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCCTGGGGGCTACTGAGTTGGACCAGATATCTTaGTGCCTCTTGTCATCACAG +
Preference number: 5 (lower is better)
Translates to: WEKDTLPFSAISGLGATELDQIS*CLLSSQ
Trigger: CTGTGATGACAAGAGGCACAAAGATATCTGGTCCAA...CTCAGTAGCCCCCAGGCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAGGATACCTCCGGCCTTaGCTCCGGCCTAGACAGCGA +
Preference number: 5 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTGYLRP*LRPRQR
Trigger: TCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCC...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGGATCACACAGCTCAGTaGGTGGGAGGGCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKDHTAQ*VGGLGF
Trigger: GAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATC...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS-3UTR CAA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTAATATCTTTGTGCCTCTaGTCATCACAGGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLISLCL*SSQGFC
Trigger: GCAGAATCCCTGTGATGACAAGAGGCACAAAGATAT...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AATGTGAATGACATTAGGGAGGCCGGGCCACAGGTAGATCCCACTGCCTGGCTATCACAGGTTTTCTCCTaGGACCAGATATCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: NVNDIREAGPQVDPTAWLSQVFS*DQISLC
Trigger: GCACAAAGATATCTGGTCCAAGGAGAAAACCTGTGA...TAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCATTCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 90 bp AATCTCCTCAAATGTGCTGGGGCTAGGGAAGCTGCTAGTTACAGCTaGGTGCAGGCTCAGGAAGAAGTGAATAGCTGTAGTCCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: NLLKCAGAREAASYS*VQAQEEVNSCSPCF
Trigger: AAAACAGGGACTACAGCTATTCACTTCTTCCTGAGCCTGCACCCAGCTGTAACTAGCAGCTTCCCTAGCCCCAGCACATTTGAGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCAGGGGCAAGGGTTCCTaGGCCTTAGGGCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSRGKGS*ALGLVD
Trigger: GTCCACCAGCCCTAAGGCCAAGGAACCCTTGCCCCT...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGAACCACCAGAACTCTTaGCGGTGCTTCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKNHQNS*RCFSSM
Trigger: CATGCTGCTGAAGCACCGCAAAGAGTTCTGGTGGTT...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp GAGGGAAATCTCATTGGACTAATACATTCCCCTACACCCTGCCTGGACCCTCTCTCCAGAGCAAACTGTTaGTTGAGCCTCATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: EGNLIGLIHSPTPCLDPLSRANC*LSLIWS
Trigger: TGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGA...GAGAGGGTCCAGGCAGGGTGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAAGCACTGTGATGATCTaGGCTCGTGGCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTSTVMI*ARGRRA
Trigger: TGCCCTCCTGCCACGAGCCAAGATCATCACAGTGCT...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp TTTGTCCCAGAACTGTGGGAAAAGGATACCCTTCCCTTCTCAGCCATCTCAGGCAAGTTGAAGGTGAAGTaGGGAACTAAGGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: FVPELWEKDTLPFSAISGKLKVK*GTKVLS
Trigger: ACTCAGGACCTTAGTTCCCAACTTCACCTTCAACTT...GCCTGAGATGGCTGAGAAGGGAAGGGTATCCTTTTCCCACAGTTCTGGGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTTCTGGATGCTCTCCATaGAGGCTGCTGGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: RYTAADEEGNLIGLIHSPSGCSP*RLLGWY
Trigger: GTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGA...AGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCGGCAGAAGGATTCACTaGGTAGTCCCGGAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSGRRIH*VVPEPQ
Trigger: TTGGGGCTCCGGGACTACCAAGTGAATCCTTCTGCC...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AAGGACATTTCTAGCCCACAGCTAGGGCTCATACTCGGCTCTATGAGCCACTGTTGTACTATGATTGGATaGGAAGATGGTCCAGTCATC +
Preference number: 5 (lower is better)
Translates to: KDISSPQLGLILGSMSHCCTMIG*EDGPVI
Trigger: GATGACTGGACCATCTTCCAATCCAATCATAGTACA...ACAGTGGCTCATAGAGCCGAGTATGAGCCCTAGCTGTGGGCTAGAAATGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGTCAACGAAGATAAGTTaGTGGAGCCAGAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMSTKIS*WSQKER
Trigger: CCTTTCCTTCTGGCTCCACAAACTTATCTTCGTTGA...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGAAGTTGAAGGTGAAGTaGGGAACTAAGGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMKLKVK*GTKVLS
Trigger: ACTCAGGACCTTAGTTCCCAACTTCACCTTCAACTT...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp CCTCCCAAGATGATGGGTCAAAGGTACCTAGCACTATTATGTGGGGTACCAAAGTCCAGAGCAAACTGTTaGTTGAGCCTCATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PPKMMGQRYLALLCGVPKSRANC*LSLIWS
Trigger: TGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGA...CTTTGGTACCCCACATAATAGTGCTAGGTACCTTTGACCCATCATCTTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAGTTGGTACGCAGCTCTaGCCCATCCACAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTVGTQL*PIHNQQ
Trigger: TTGCTGATTGTGGATGGGCAAGAGCTGCGTACCAAC...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp ATGCAAGGGGTCTCTCCCATAGCCAGGTATAGAATAGATACACTGCTGCGGATGTGTACTATGATTGGATaGGAAGATGGTCCAGTCATC +
Preference number: 5 (lower is better)
Translates to: MQGVSPIARYRIDTLLRMCTMIG*EDGPVI
Trigger: GATGACTGGACCATCTTCCAATCCAATCATAGTACA...CATCCGCAGCAGTGTATCTATTCTATACCTGGCTATGGGAGAGACCCCTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAAGAGCAAACTGTTTGTaGAGCCTCATCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTRANCL*SLIWSA
Trigger: GGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCT...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS TCA 90 bp AGAGGTAGGGAAAAGGTACATGCTCCATTATCCCCATTTCACATATaGGTAACTCAGAGAAGCTTAGAACCTTGCCCAGGATCACACAGC +
Preference number: 5 (lower is better)
Translates to: RGREKVHAPLSPFHI*VTQRSLEPCPGSHS
Trigger: GCTGTGTGATCCTGGGCAAGGTTCTAAGCTTCTCTGAGTTACTCATATGTGAAATGGGGATAATGGAGCATGTACCTTTTCCCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS-3UTR CAA 90 bp AGGTACCTAGCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCATCAACGAAGATAAGTTaGTGGAGCCAGAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: RYLALLCGVPKEAPLFVPSTKIS*WSQKER
Trigger: CCTTTCCTTCTGGCTCCACAAACTTATCTTCGTTGA...TGGGACAAATAAAGGGGCTTCCTTTGGTACCCCACATAATAGTGCTAGGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp AATAGATACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCAGAGCAAACTGTTTGTaGAGCCTCATCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: NRYTAADEEGNLIGLIHSRANCL*SLIWSA
Trigger: GGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCT...GGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTATCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS-3UTR CAA 90 bp TACACTGCTGCGGATGAAGAGGGAAATCTCATTGGACTAATACATTCCCCTACAATATCTTTGTGCCTCTaGTCATCACAGGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: YTAADEEGNLIGLIHSPTISLCL*SSQGFC
Trigger: GCAGAATCCCTGTGATGACAAGAGGCACAAAGATAT...TGTAGGGGAATGTATTAGTCCAATGAGATTTCCCTCTTCATCCGCAGCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp GACCTGGGTTCCGGGAAATCAAGCGGCCCTCCGCAGTaGCGGGCCGAGCCGCGGCCTCCGAGACGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: DLGSGKSSGPPQ*RAEPRPPRRRA
Trigger: AGCCCGCCGTCTCGGAGGCCGCGGCTCGGCCCGGCACTGCGGAGGGCCGCTTGATTTCCCGGAACCCAGGTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS GCA 72 bp CTTCCCTGCTTTCGGGGCCACGGGCCGCGTCGCGGCTaGTCCGCCATCTCCGAGCGAACGCTCTGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: LPCFRGHGPRRG*SAISERTLCRS
Trigger: GCTGCGGCAGAGCGTTCGCTCGGAGATGGCGGAGCAGCCGCGACGCGGCCCGTGGCCCCGAAAGCAGGGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS CCA 72 bp GGATCCACCGGCTCCGGCCCTAGCAGCCGCGCGACCTaGGTTCCGGGAAATCAAGCGGCCCTCCGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: GSTGSGPSSRAT*VPGNQAALRSA
Trigger: GGCACTGCGGAGGGCCGCTTGATTTCCCGGAACCCAGGTCGCGCGGCTGCTAGGGCCGGAGCCGGTGGATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS CCA 72 bp CACAGTGGGAAGCCGGGCCCGACGAAGAACTGGTCCTaGCACTGCGGGCTCAGCTGGCCGAAGGCTGGCAAG +
Preference number: 6 (lower is better)
Translates to: HSGKPGPTKNWS*HCGLSWPKAGK
Trigger: CTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGGGCCCGGCTTCCCACTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp ATGGCCCCCTGGCCCATGGCTTCAGGCTGCAAATCTTaGCAGGCTCTCCCCTTGGCCCTGGCTGAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: MAPWPMASGCKS*QALPLALAERL
Trigger: GAGGCGCTCAGCCAGGGCCAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGGCCAGGGGGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS CCA 72 bp CTGTACCACAGTGGGAAGCCGGGCCCGACGAAGAACTaGTCCTGGCACTGCGGGCTCAGCTGGCCGAAGGCT +
Preference number: 6 (lower is better)
Translates to: LYHSGKPGPTKN*SWHCGLSWPKA
Trigger: AGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGGGCCCGGCTTCCCACTGTGGTACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp GGTAGCGGGCAGGGCGGAGATGGGGATACTCCTCAGTaGTGGTCACCTGGATGCCCCACACGGATTTCCAGG +
Preference number: 6 (lower is better)
Translates to: GSGQGGDGDTPQ*WSPGCPTRISR
Trigger: CCTGGAAATCCGTGTGGGGCATCCAGGTGACCAGCACTGAGGAGTATCCCCATCTCCGCCCTGCCCGCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 72 bp CAGCAGTATGAGGCGGTGCAGTTCCAGCTGCCGAGCTaGGCGTACCACCTTCCACAACTGGAGCATGGCGGG +
Preference number: 6 (lower is better)
Translates to: QQYEAVQFQLPS*AYHLPQLEHGG
Trigger: CCCGCCATGCTCCAGTTGTGGAAGGTGGTACGCCCAGCTCGGCAGCTGGAACTGCACCGCCTCATACTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS TCA 72 bp CAGGCAGTGGCCCTGGTTCTAGGCGGCTGGGGCGTGTaGGATGCAGTAGCGGGGCAGAAGGATTCACTTGGT +
Preference number: 6 (lower is better)
Translates to: QAVALVLGGWGV*DAVAGQKDSLG
Trigger: ACCAAGTGAATCCTTCTGCCCCGCTACTGCATCTCACACGCCCCAGCCGCCTAGAACCAGGGCCACTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp GCGATCAGCAGCAGTATGAGGCGGTGCAGTTCCAGCTaGCGAGCTGGGCGTACCACCTTCCACAACTGGAGC +
Preference number: 6 (lower is better)
Translates to: AISSSMRRCSSS*RAGRTTFHNWS
Trigger: GCTCCAGTTGTGGAAGGTGGTACGCCCAGCTCGGCAGCTGGAACTGCACCGCCTCATACTGCTGCTGATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp TGGTATGGGAGGCTGGGACATCAGCCCAGACTGGAATaGTGCAGTTCTTCCCGAAGCCACGAGGGCACTGGC +
Preference number: 6 (lower is better)
Translates to: WYGRLGHQPRLE*CSSSRSHEGTG
Trigger: GCCAGTGCCCTCGTGGCTTCGGGAAGAACTGCAGCATTCCAGTCTGGGCTGATGTCCCAGCCTCCCATACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp AGGCCTGTCAAGCTCCAGAGCCGCGTTCTTAGCCGCTaGATTTTAGCTTCATACCCGGAGGACTGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RPVKLQSRVLSR*ILASYPEDWAA
Trigger: CGCCGCCCAGTCCTCCGGGTATGAAGCTAAAATGCAGCGGCTAAGAACGCGGCTCTGGAGCTTGACAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309979.11
ENST00000398701.2
CDS CCA 72 bp GGAATGCTGCAGTTCTTCCCGAAGCCACGAGGGCACTaGCTGTCCAAGCCGGCTCAGCAGCTTCGACAACTC +
Preference number: 6 (lower is better)
Translates to: GMLQFFPKPRGH*LSKPAQQLRQL
Trigger: GAGTTGTCGAAGCTGCTGAGCCGGCTTGGACAGCCAGTGCCCTCGTGGCTTCGGGAAGAACTGCAGCATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 72 bp TTGCCCAGGATCACACAGCTCAGTTGGTGGGAGGGCTaGGATTCGACGTCAGGCCTGTCAAGCTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LPRITQLSWWEG*DSTSGLSSSRA
Trigger: GGCTCTGGAGCTTGACAGGCCTGACGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309979.11
ENST00000398701.2
CDS CCA 72 bp CCCTCTACCTTGCCCAGGATCACACAGCTCAGTTGGTaGGAGGGCTGGGATTCGACGTCAGGCCTGTCAAGC +
Preference number: 6 (lower is better)
Translates to: PSTLPRITQLSW*EGWDSTSGLSS
Trigger: GCTTGACAGGCCTGACGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAAGGTAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS CCA 72 bp CCGACGAAGAACTGGTCCTGGCACTGCGGGCTCAGCTaGCCGAAGGCTGGCAAGAAGCACTGGTTCATATGT +
Preference number: 6 (lower is better)
Translates to: PTKNWSWHCGLS*PKAGKKHWFIC
Trigger: ACATATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAGTTCTTCGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 90 bp CCCTGGCCCATGGCTTCAGGCTGCAAATCTTGCCAGGCTCTCCCCTaGGCCCTGGCTGAGCGCCTCACATCAAAGGTCAGCAAAGTTCAA +
Preference number: 6 (lower is better)
Translates to: PWPMASGCKSCQALP*ALAERLTSKVSKVQ
Trigger: TTGAACTTTGCTGACCTTTGATGTGAGGCGCTCAGCCAGGGCCAAGGGGAGAGCCTGGCAAGATTTGCAGCCTGAAGCCATGGGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS CAA 90 bp GTTCAATCTCTTCCCCTCTACCTTGCCCAGGATCACACAGCTCAGTaGGTGGGAGGGCTGGGATTCGACGTCAGGCCTGTCAAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: VQSLPLYLAQDHTAQ*VGGLGFDVRPVKLQ
Trigger: CTGGAGCTTGACAGGCCTGACGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAAGGTAGAGGGGAAGAGATTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309979.11
CDS CCA 72 bp GGAGGAAGGGTCTGTAGGCGCAGCCGTGTCCAACACTaGAGGAAGCGCACCAAGCTCTCAAAGGTGTATAGG +
Preference number: 6 (lower is better)
Translates to: GGRVCRRSRVQH*RKRTKLSKVYR
Trigger: CCTATACACCTTTGAGAGCTTGGTGCGCTTCCTCCAGTGTTGGACACGGCTGCGCCTACAGACCCTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 72 bp CTTAGAACCTTGCCCAGGATCACACAGCTCAGTTGGTaGGAGGGCTGGGATTCGACGTCAGGCCTGTCAAGC +
Preference number: 6 (lower is better)
Translates to: LRTLPRITQLSW*EGWDSTSGLSS
Trigger: GCTTGACAGGCCTGACGTCGAATCCCAGCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAAGGTTCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS TCA 72 bp GGGTGTGATACCCAGGAACTTCTGGATGCTCTCCATTaGGGCTGCTGGGTTGGTACGCAGCTCTTGCCCATC +
Preference number: 6 (lower is better)
Translates to: GCDTQELLDALH*GCWVGTQLLPI
Trigger: GATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGAAGTTCCTGGGTATCACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000429742.1
CDS CCA 72 bp CCAAGACATAGCGGCCATGGGTATTATCAGTCAATGTaGGCATGTCCCCTCGGCCAGGTGCCAACTCAGTGC +
Preference number: 6 (lower is better)
Translates to: PRHSGHGYYQSM*ACPLGQVPTQC
Trigger: GCACTGAGTTGGCACCTGGCCGAGGGGACATGCCCACATTGACTGATAATACCCATGGCCGCTATGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 72 bp CTGGTCCTGGCACTGCGGGCTCAGCTGGCCGAAGGCTaGCAAGAAGCACTGGTTCATATGTACTATGATTGG +
Preference number: 6 (lower is better)
Translates to: LVLALRAQLAEG*QEALVHMYYDW
Trigger: CCAATCATAGTACATATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCAGTGCCAGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 72 bp AGGTCCGTGGGAATCCCATGCTCCAGAGCAAACTGTTaGTTGAGCCTCATCTGGTCAGCCAGCACGGAGCGA +
Preference number: 6 (lower is better)
Translates to: RSVGIPCSRANC*LSLIWSASTER
Trigger: TCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGAGCATGGGATTCCCACGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 72 bp CGGGACTCAGTGTCCATATCTGGATACCTCCGGCCTTaGCTCCGGCCTAGACAGCGAGTCTTACCACCTTCA +
Preference number: 6 (lower is better)
Translates to: RDSVSISGYLRP*LRPRQRVLPPS
Trigger: TGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 90 bp AGGAAAAGACGGGACTCAGTGTCCATATCTGGATACCTCCGGCCTTaGCTCCGGCCTAGACAGCGAGTCTTACCACCTTCAAGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: RKRRDSVSISGYLRP*LRPRQRVLPPSSPW
Trigger: CCAGGGACTTGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGTCCCGTCTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS TCA 72 bp CCGTGGGAATCCCATGCTCCAGAGCAAACTGTTTGTTaGGCCTCATCTGGTCAGCCAGCACGGAGCGATTGT +
Preference number: 6 (lower is better)
Translates to: PWESHAPEQTVC*ASSGQPARSDC
Trigger: ACAATCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGAGCATGGGATTCCCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp GGGACTCAGTGTCCATATCTGGATACCTCCGGCCTTTaGTCCGGCCTAGACAGCGAGTCTTACCACCTTCAA +
Preference number: 6 (lower is better)
Translates to: GTQCPYLDTSGL*SGLDSESYHLQ
Trigger: TTGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp ACTTGCCATCCAGCCACCCATGCGAACCTAAATTCATaGCCACCACTAGCTCCTCACAGCAGTCTGACCCCA +
Preference number: 6 (lower is better)
Translates to: TCHPATHANLNS*PPLAPHSSLTP
Trigger: TGGGGTCAGACTGCTGTGAGGAGCTAGTGGTGGGCATGAATTTAGGTTCGCATGGGTGGCTGGATGGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS CCA 72 bp GGCAACTATACAGAGTCCACTTGTCTCAGGTCACCATaGCCCCCTGGCCCATGGCTTCAGGCTGCAAATCTT +
Preference number: 6 (lower is better)
Translates to: GNYTESTCLRSP*PPGPWLQAANL
Trigger: AAGATTTGCAGCCTGAAGCCATGGGCCAGGGGGCCATGGTGACCTGAGACAAGTGGACTCTGTATAGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000465929.1
CDS CAA 72 bp TCCGTGGGAATCCCATGCTCCAGAGCAAACTGTTTGTaGAGCCTCATCTGGTCAGCCAGCACGGAGCGATTG +
Preference number: 6 (lower is better)
Translates to: SVGIPCSRANCL*SLIWSASTERL
Trigger: CAATCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGAGCATGGGATTCCCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 90 bp GTGATACCCAGGAACTTCTGGATGCTCTCCATTGAGGCTGCTGGGTaGGTACGCAGCTCTTGCCCATCCACAATCAGCAACTGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: VIPRNFWMLSIEAAG*VRSSCPSTISNCPE
Trigger: CTCTGGACAGTTGCTGATTGTGGATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGAAGTTCCTGGGTATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000429742.1
CDS CAA 90 bp CTGGCTTTACTTACCTCAGTGTCCATATCTGGATACCTCCGGCCTTaGCTCCGGCCTAGACAGCGAGTCTTACCACCTTCAAGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LALLTSVSISGYLRP*LRPRQRVLPPSSPW
Trigger: CCAGGGACTTGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGGTAAGTAAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429742.1
CDS TCA 72 bp ACCACTAGCTCCTCACAGCAGTCTGACCCCAAACCTTaGCCCTTTTCTTCAACTTGTCTGCCCAGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: TTSSSQQSDPKP*PFSSTCLPREV
Trigger: CACCTCCCTGGGCAGACAAGTTGAAGAAAAGGGTCAAGGTTTGGGGTCAGACTGCTGTGAGGAGCTAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS GCA 72 bp ATTTGCCCCACTGCCAACTTGCCATCCAGCCACCCATaGGAACCTAAATTCATGCCCACCACTAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ICPTANLPSSHP*EPKFMPTTSSS
Trigger: TGAGGAGCTAGTGGTGGGCATGAATTTAGGTTCGCATGGGTGGCTGGATGGCAAGTTGGCAGTGGGGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS GCA 72 bp CCTTCCATCCCTGATCCTTGCCTAAGACTTTCTATTTaGCCCACTGCCAACTTGCCATCCAGCCACCCATGC +
Preference number: 6 (lower is better)
Translates to: PSIPDPCLRLSI*PTANLPSSHPC
Trigger: GCATGGGTGGCTGGATGGCAAGTTGGCAGTGGGGCAAATAGAAAGTCTTAGGCAAGGATCAGGGATGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS CCA 72 bp CCATGCTCCAGAGCAAACTGTTTGTTGAGCCTCATCTaGTCAGCCAGCACGGAGCGATTGTGGAACAGGTGT +
Preference number: 6 (lower is better)
Translates to: PCSRANCLLSLI*SASTERLWNRC
Trigger: ACACCTGTTCCACAATCGCTCCGTGCTGGCTGACCAGATGAGGCTCAACAAACAGTTTGCTCTGGAGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 72 bp GGAACTTCTGGATGCTCTCCATTGAGGCTGCTGGGTTaGTACGCAGCTCTTGCCCATCCACAATCAGCAACT +
Preference number: 6 (lower is better)
Translates to: GTSGCSPLRLLG*YAALAHPQSAT
Trigger: AGTTGCTGATTGTGGATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGAAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000429742.1
CDS CAA 72 bp AGGAACTTCTGGATGCTCTCCATTGAGGCTGCTGGGTaGGTACGCAGCTCTTGCCCATCCACAATCAGCAAC +
Preference number: 6 (lower is better)
Translates to: RNFWMLSIEAAG*VRSSCPSTISN
Trigger: GTTGCTGATTGTGGATGGGCAAGAGCTGCGTACCAACCCAGCAGCCTCAATGGAGAGCATCCAGAAGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000429742.1
CDS CAA 72 bp CTTACCTCAGTGTCCATATCTGGATACCTCCGGCCTTaGCTCCGGCCTAGACAGCGAGTCTTACCACCTTCA +
Preference number: 6 (lower is better)
Translates to: LTSVSISGYLRP*LRPRQRVLPPS
Trigger: TGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGGTAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429742.1
CDS CAA 90 bp AGGCGCTTGCCAGTGAGGTATGCAACAGCATCAACGAAGATAAGTTaGTGGAGCCAGAAGGAAAGGCCATGTCCAAAGAGCACCCGCTGG +
Preference number: 6 (lower is better)
Translates to: RRLPVRYATASTKIS*WSQKERPCPKSTRW
Trigger: CCAGCGGGTGCTCTTTGGACATGGCCTTTCCTTCTGGCTCCACAAACTTATCTTCGTTGATGCTGTTGCATACCTCACTGGCAAGCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp GTCAAGGTCCAGGCAGAGGCGCTTGCCAGTGAGGTATaGAACAGCATCAACGAAGATAAGTTTGTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: VKVQAEALASEV*NSINEDKFVEP
Trigger: TGGCTCCACAAACTTATCTTCGTTGATGCTGTTGCATACCTCACTGGCAAGCGCCTCTGCCTGGACCTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp GAACTCTTTGCGGTGCTTCAGCAGCATGTCGTCCCCTaGATCCTCCTCCTCTGTCCCAGTATGATAGAACTT +
Preference number: 6 (lower is better)
Translates to: ELFAVLQQHVVP*ILLLCPSMIEL
Trigger: AAGTTCTATCATACTGGGACAGAGGAGGAGGATGCAGGGGACGACATGCTGCTGAAGCACCGCAAAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp TTACCTCAGTGTCCATATCTGGATACCTCCGGCCTTTaGTCCGGCCTAGACAGCGAGTCTTACCACCTTCAA +
Preference number: 6 (lower is better)
Translates to: LPQCPYLDTSGL*SGLDSESYHLQ
Trigger: TTGAAGGTGGTAAGACTCGCTGTCTAGGCCGGAGCAAAGGCCGGAGGTATCCAGATATGGACACTGAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429742.1
CDS CAA 90 bp ATCCCTGATCCTTGCCTAAGACTTTCTATTTGCCCCACTGCCAACTaGCCATCCAGCCACCCATGCGAACCTAAATTCATGCCCACCACT +
Preference number: 6 (lower is better)
Translates to: IPDPCLRLSICPTAN*PSSHPCEPKFMPTT
Trigger: AGTGGTGGGCATGAATTTAGGTTCGCATGGGTGGCTGGATGGCAAGTTGGCAGTGGGGCAAATAGAAAGTCTTAGGCAAGGATCAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS CCA 72 bp TGCGGGCTCAGCTGGCCGAAGGCTGGCAAGAAGCACTaGTTCATATGTACTATGATTGGATTGGAAGATGGT +
Preference number: 6 (lower is better)
Translates to: CGLSWPKAGKKH*FICTMIGLEDG
Trigger: ACCATCTTCCAATCCAATCATAGTACATATGAACCAGTGCTTCTTGCCAGCCTTCGGCCAGCTGAGCCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 90 bp GGTCCCACAATGAGGAACTTCGGGAGACGATCACAGGTTTTCTCCTaGGACCAGATATCTTTGTGCCTCTTGTCATCACAGGGATTCTGC +
Preference number: 6 (lower is better)
Translates to: GPTMRNFGRRSQVFS*DQISLCLLSSQGFC
Trigger: GCAGAATCCCTGTGATGACAAGAGGCACAAAGATATCTGGTCCAAGGAGAAAACCTGTGATCGTCTCCCGAAGTTCCTCATTGTGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS GCA 72 bp ATTATCAGTCAATGTGGGCATGTCCCCTCGGCCAGGTaGCAACTCAGTGCTATAACGAAAACGACTAGACTC +
Preference number: 6 (lower is better)
Translates to: IISQCGHVPSAR*QLSAITKTTRL
Trigger: GAGTCTAGTCGTTTTCGTTATAGCACTGAGTTGGCACCTGGCCGAGGGGACATGCCCACATTGACTGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CCA 72 bp AAGGTGAAGTTGGGAACTAAGGTCCTGAGTTTGTTCTaGGTGGTCAACAGAGCCTCAACATCAGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: KVKLGTKVLSLF*VVNRASTSATF
Trigger: GAAGGTGGCTGATGTTGAGGCTCTGTTGACCACCCAGAACAAACTCAGGACCTTAGTTCCCAACTTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000463410.1
CDS CAA 72 bp GGCAAGAAGCACTGGTTCATATGTACTATGATTGGATaGGAAGATGGTCCAGTCATCACCAGGCAGTGGCCC +
Preference number: 6 (lower is better)
Translates to: GKKHWFICTMIG*EDGPVITRQWP
Trigger: GGGCCACTGCCTGGTGATGACTGGACCATCTTCCAATCCAATCATAGTACATATGAACCAGTGCTTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 72 bp CCTTGCCTAAGACTTTCTATTTGCCCCACTGCCAACTaGCCATCCAGCCACCCATGCGAACCTAAATTCATG +
Preference number: 6 (lower is better)
Translates to: PCLRLSICPTAN*PSSHPCEPKFM
Trigger: CATGAATTTAGGTTCGCATGGGTGGCTGGATGGCAAGTTGGCAGTGGGGCAAATAGAAAGTCTTAGGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463410.1
CDS CAA 72 bp CCAGTGAGGTATGCAACAGCATCAACGAAGATAAGTTaGTGGAGCCAGAAGGAAAGGCCATGTCCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: PVRYATASTKIS*WSQKERPCPKS
Trigger: GCTCTTTGGACATGGCCTTTCCTTCTGGCTCCACAAACTTATCTTCGTTGATGCTGTTGCATACCTCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299641.8
ENST00000309979.11
CDS CAA 72 bp AAGTTGAAGGTGAAGTTGGGAACTAAGGTCCTGAGTTaGTTCTGGGTGGTCAACAGAGCCTCAACATCAGCC +
Preference number: 6 (lower is better)
Translates to: KLKVKLGTKVLS*FWVVNRASTSA
Trigger: GGCTGATGTTGAGGCTCTGTTGACCACCCAGAACAAACTCAGGACCTTAGTTCCCAACTTCACCTTCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299641.8
ENST00000309979.11
ENST00000463410.1
CDS CAA 72 bp ATTTCACATATGAGTAACTCAGAGAAGCTTAGAACCTaGCCCAGGATCACACAGCTCAGTTGGTGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: ISHMSNSEKLRT*PRITQLSWWEG
Trigger: GCCCTCCCACCAACTGAGCTGTGTGATCCTGGGCAAGGTTCTAAGCTTCTCTGAGTTACTCATATGTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398701.2
CDS TCA 72 bp GAAAAGGTACATGCTCCATTATCCCCATTTCACATATaGGTAACTCAGAGAAGCTTAGAACCTTGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: EKVHAPLSPFHI*VTQRSLEPCPG
Trigger: TCCTGGGCAAGGTTCTAAGCTTCTCTGAGTTACTCATATGTGAAATGGGGATAATGGAGCATGTACCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398701.2