RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCOR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196498

Ensembl transcript IDs: ENST00000356219.7, ENST00000404121.6, ENST00000404621.5, ENST00000405201.5, ENST00000413172.1, ENST00000418829.5, ENST00000420698.5, ENST00000429285.6, ENST00000440187.5, ENST00000440337.3, ENST00000443451.6, ENST00000448008.1, ENST00000448614.1, ENST00000453428.1, ENST00000458234.5, ENST00000461081.2, ENST00000464377.1, ENST00000473999.2, ENST00000493859.1, ENST00000494460.1, ENST00000536195.1, ENST00000542565.1, ENST00000542927.5

Found 2452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTaGCCGCCTGCGTGTGGCTGCCACACGCCTGCCGTGCCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: GVEVRGHPALGPWPP*PPACGCHTPAVPPP
Trigger: GGGAGGGGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp GGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTaGCCGCCCTGGCCGCCTGCGTGTGGCTGCCACACGCCTGCCGTG +
Preference number: 1 (lower is better)
Translates to: GGSGVEVRGHPALGP*PPWPPACGCHTPAV
Trigger: CACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp CGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTCC +
Preference number: 1 (lower is better)
Translates to: RTDGWRRRRTQGLLP*LGESAAALLLQGRS
Trigger: GGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp CAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTCCTGTG +
Preference number: 1 (lower is better)
Translates to: QMDGGAGGLRGSFLG*GSRQPPCSCRAVPV
Trigger: CACAGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp GAGTCACTCGCTGTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGG +
Preference number: 1 (lower is better)
Translates to: ESLAVGECLVLRAEQ*LGLLVPGVVGASEG
Trigger: CCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGCGAGTGACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418829.5
3UTR GCA 90 bp CCCCGCCCTGTTCTGAGTCACTCGCTGTCGGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGG +
Preference number: 1 (lower is better)
Translates to: PRPVLSHSLSESVSY*EQSSGLGSSSQAWW
Trigger: CCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGCGAGTGACTCAGAACAGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418829.5
3UTR CCA 90 bp TTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGTG +
Preference number: 1 (lower is better)
Translates to: FGSKCIRGRQWRGGA*SSCFGSLAALAACV
Trigger: CACGCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp GGAGGCGGAGGGAGGGCGCGGGGGCTGCGAGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTG +
Preference number: 1 (lower is better)
Translates to: GGGGRARGLRAQFRL*FQMHSGEAVAWRCV
Trigger: CACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCCCTCCGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp TGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTaGGGACCGGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTC +
Preference number: 1 (lower is better)
Translates to: WPDLVSSNLVGWGSL*GPERAHWGLDRACV
Trigger: GACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR GCA 90 bp GGAGGGCGCGGGGGCTGCGAGCTCAGTTTAGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGC +
Preference number: 1 (lower is better)
Translates to: GGRGGCELSLDFGSK*IRGRQWRGGAWSSC
Trigger: GCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR GCA 90 bp CAGCCCGGGGCGGGAGTCTTAGTTAAGGCTTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCA +
Preference number: 1 (lower is better)
Translates to: QPGAGVLVKALDRQG*RLWTDRWMEAQADS
Trigger: TGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAAAGCCTTAACTAAGACTCCCGCCCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp GTTAAGGCTTTAGACAGGCAAGGATGCCGGCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGG +
Preference number: 1 (lower is better)
Translates to: VKALDRQGCRLWTDR*MEAQADSGAPSLVG
Trigger: CCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAAAGCCTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp GCGGGAGTCTTAGTTAAGGCTTTAGACAGGCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCT +
Preference number: 1 (lower is better)
Translates to: AGVLVKALDRQGCRL*TDRWMEAQADSGAP
Trigger: AGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAAAGCCTTAACTAAGACTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp CAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTaGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: QFRLWFQMHSGEAVA*RCVVILLWVPGRPG
Trigger: GCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTaGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCC +
Preference number: 1 (lower is better)
Translates to: ELSLDFGSKCIRGRQ*RGGAWSSCFGSLAA
Trigger: GGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR GCA 90 bp TTTTTAATTAGAACGACGTGTGTAAATGACAGAATACCACCACCCTaGGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCC +
Preference number: 1 (lower is better)
Translates to: FLIRTTCVNDRIPPP*ADGGHRIRIEFILP
Trigger: GGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTACACACGTCGTTCTAATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR TCA 90 bp ACCACGGGGCAAGTGTTTCATGGAGTTTTAAACTTCTGCTCCGAATaGATCATACGAATACAAAGTGGTCAAATCGTCTTTCCGACCACT +
Preference number: 1 (lower is better)
Translates to: TTGQVFHGVLNFCSE*IIRIQSGQIVFPTT
Trigger: AGTGGTCGGAAAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCATGAAACACTTGCCCCGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR CCA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGGAGGCCCGGTGGGGGTaGGGAAGCCATGACACCCGC +
Preference number: 2 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLEARWG*GSHDTR
Trigger: GCGGGTGTCATGGCTTCCCCACCCCCACCGGGCCTC...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
3UTR-3UTR TCA 90 bp ACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGGGGGTGGGGAAGCCATaGCACCCGCCTGCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: TASRAVAWAPRPRRGGGQGVGKP*HPPAAA
Trigger: TGCGGCTGCAGGCGGGTGTCATGGCTTCCCCACCCC...CTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
3UTR CAA 90 bp CACTCGCTGTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: HSLSESVSYCEQSSG*GSSSQAWWGPARGP
Trigger: CGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGCGAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418829.5
3UTR CAA 90 bp ACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTC +
Preference number: 2 (lower is better)
Translates to: TDRWMEAQADSGAPS*VGGVGSRPAPAGPF
Trigger: GAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCAGCCGCCCTGCTCCTaGAGGGCCGTTCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: DRACVHLSRALSGMGGGGQPPCS*RAVPVA
Trigger: AGCCACAGGAACGGCCCTGCAGGAGCAGGGCGGCTG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGAC +
Preference number: 2 (lower is better)
Translates to: RGGAWSSCFGSLAALAACLWTDR*MEAQAD
Trigger: GTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCAGCCGCCCTGCTCCTaGAGGGCCGTTCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQQPPCS*RAVPVA
Trigger: AGCCACAGGAACGGCCCTGCAGGAGCAGGGCGGCTG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAQGLLP*LGESAA
Trigger: GGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGTGGTCATCCTGCTTTaGGTCCCTGGCCGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAVVILL*VPGRPG
Trigger: GCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCAC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR TCA 90 bp CCCCCGCCCTGTTCTGAGTCACTCGCTGTCGGAGAGTGTCTCGTACTGCGAGCAGGGGTGGGGAAGCCATaGCACCCGCCTGCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: PPPCSESLAVGECLVLRAGVGKP*HPPAAA
Trigger: TGCGGCTGCAGGCGGGTGTCATGGCTTCCCCACCCC...TGCTCGCAGTACGAGACACTCTCCGACAGCGAGTGACTCAGAACAGGGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418829.5
3UTR-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTAGTCGGCAGCCGCCCTaGTCCTGCAGGGCCGTTCCT +
Preference number: 2 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLSRQPP*SCRAVP
Trigger: AGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACT...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 2 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGAGCAATCTCGTTGGCTaGGGCAGTCTGTGGGGACCG +
Preference number: 2 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSNLVG*GSLWGP
Trigger: CGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCT...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCAGCCGCCCTGCTCCTaGAGGGCCGTTCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARQPPCS*RAVPVA
Trigger: AGCCACAGGAACGGCCCTGCAGGAGCAGGGCGGCTG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCCGCCTGCGTGTGGCTaGCACACGCCTGCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAPPACG*HTPAVP
Trigger: GGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLQGLLP*LGESAA
Trigger: GGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 2 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGTGCGTGGTCATCCTaGTTTGGGTCCCTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGAWSS*FGSLAA
Trigger: GGCGGCCAGGGACCCAAAGCAGGATGACCACGCACC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: FPAISLAGAVCGDRNERTGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 2 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCTGGCCGCCTGCGTGTaGCTGCCACACGCCTGCCGT +
Preference number: 2 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNLAACV*LPHACR
Trigger: ACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACAGCCGCCCTGCTCCTaGAGGGCCGTTCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGQPPCS*RAVPVA
Trigger: AGCCACAGGAACGGCCCTGCAGGAGCAGGGCGGCTG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 2 (lower is better)
Translates to: GTSALGAGQGLRPSVQSALDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGAC +
Preference number: 2 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALLWTDR*MEAQAD
Trigger: GTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACATTCGGGGGAGGCAGTaGCGTGGAGGTGCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHIRGRQ*RGGAWS
Trigger: TGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGAGCGCACTGGGGGCTaGACAGGGCCTGCGTCCATC +
Preference number: 2 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAERTGG*TGPASI
Trigger: GATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCAGTGGCGTGGAGGTaGGTGGTCATCCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHAVAWR*VVILLW
Trigger: CCAAAGCAGGATGACCACGCACCTCCACGCCACTGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: DRACVHLSRALSGMGGGGDFGSK*IRGRQW
Trigger: CCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCTGGCCGCCTGCGTGTaGCTGCCACACGCCTGCCGT +
Preference number: 2 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALAACV*LPHACR
Trigger: ACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACCCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: ATEYASNSFCPRKGGREDPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 2 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 2 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 2 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAATTCGGGGGAGGCAGTaGCGTGGAGGTGCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGIRGRQ*RGGAWS
Trigger: TGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 2 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALLDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGCAGTGGCGTGGAGGTaGGTGGTCATCCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNAVAWR*VVILLW
Trigger: CCAAAGCAGGATGACCACGCACCTCCACGCCACTGC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCCTTGGTCCTGCGAGTaGTGGGGTCACCGACTGTCG +
Preference number: 2 (lower is better)
Translates to: PAQMAATEYASNSFCPRKPWSCE*WGHRLS
Trigger: CGACAGTCGGTGACCCCATCACTCGCAGGACCAAGG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHDFGSK*IRGRQW
Trigger: CCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACCACCGACTGTCGGCCTaGACACGCCTCTTGAACGGT +
Preference number: 2 (lower is better)
Translates to: ATEYASNSFCPRKGGREDHRLSA*TRLLNG
Trigger: ACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCGGTG...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR TCA 90 bp TCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATCACGAGTCCGTGACCTaGTGGAGCTGGCTCCAGGCT +
Preference number: 2 (lower is better)
Translates to: SLLCKPNRGFHEVAGDADHESVT*WSWLQA
Trigger: AGCCTGGAGCCAGCTCCATCAGGTCACGGACTCGTG...ATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR TCA 90 bp CTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTAAGGCCACGAGTCCGTaGCCTGATGGAGCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: LLCKPNRGFHEVAGDADAKATSP*PDGAGS
Trigger: GGAGCCAGCTCCATCAGGTCACGGACTCGTGGCCTT...AGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGDFGSK*IRGRQW
Trigger: CCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 2 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 2 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTTCCAGCAATCTCGTTaGCTGGGGCAGTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: ATEYASNSFCPRKGGREDFQQSR*LGQSVG
Trigger: CCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTTCCAGCAATCTCGTTaGCTGGGGCAGTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREFQQSR*LGQSVG
Trigger: CCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGG +
Preference number: 2 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHAQFRL*FQMHSG
Trigger: CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGG +
Preference number: 2 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALAQFRL*FQMHSG
Trigger: CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp CTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTTCACAGCAGCGCGACTaGGCCTTCTACCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LLCKPNRGFHEVAGDADASQQRD*AFYPRP
Trigger: TGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGA...AGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 2 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CCA 90 bp TCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATTTCTGTAGCAACTGCTaGCTGCCTGCGTTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SLLCKPNRGFHEVAGDADFCSNC*LPAFSF
Trigger: AAAAGAAAACGCAGGCAGCCAGCAGTTGCTACAGAA...ATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR TCA 90 bp CTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTTTTCTGCAGCACTTTTaGAAAAACAGCCATGTGCAT +
Preference number: 2 (lower is better)
Translates to: LLCKPNRGFHEVAGDADAFLQHF*KNSHVH
Trigger: ATGCACATGGCTGTTTTTTCAAAAGTGCTGCAGAAA...AGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR GCA 90 bp CATACGAATACAAAGTGGTCAAATCGTCTTTCCGACCACTCGCTCCTTTGTAAACGTTTCTGTAGCAACTaGTGGCTGCCTGCGTTTTCT +
Preference number: 2 (lower is better)
Translates to: HTNTKWSNRLSDHSLLCKRFCSN*WLPAFS
Trigger: AGAAAACGCAGGCAGCCAGCAGTTGCTACAGAAACG...TTTACAAAGGAGCGAGTGGTCGGAAAGACGATTTGACCACTTTGTATTCGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR TCA 90 bp TTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTAACAAGGGTGAGTGCTaGAATCACAGCAGCGCGACT +
Preference number: 2 (lower is better)
Translates to: FKLLLRMNHTNTKWSNRLNKGEC*NHSSAT
Trigger: AGTCGCGCTGCTGTGATTTCAGCACTCACCCTTGTT...AAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR GCA 90 bp TTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTGTTTGTAGCCAGGGATaGTCACACCTTTTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: FKLLLRMNHTNTKWSNRLVCSQG*SHLFCC
Trigger: ACAGCAGAAAAGGTGTGAGCATCCCTGGCTACAAAC...AAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR TCA 90 bp TTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTGTGATGCAGATGCTTTaGAAATCACGTTTCTGTAGC +
Preference number: 2 (lower is better)
Translates to: FKLLLRMNHTNTKWSNRLVMQML*KSRFCS
Trigger: GCTACAGAAACGTGATTTTCAAAGCATCTGCATCAC...AAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR TCA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATAAACAGCCATGTGCATaGAGAAAAAGCAACATTTCC +
Preference number: 2 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNKQPCA*RKSNIS
Trigger: GGAAATGTTGCTTTTTCTTCATGCACATGGCTGTTT...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR GCA 72 bp TCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTaGGTGTGGCTGCCACACGCCTGCCGTGCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: SSCFGSLAALAA*VWLPHACRAPS
Trigger: GGAGGGGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR GCA 72 bp CGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTaGTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGTG +
Preference number: 3 (lower is better)
Translates to: RGRQWRGGAWSS*FGSLAALAACV
Trigger: CACGCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp GGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: GGAGGLRGSFLG*GSRQPPCSCRA
Trigger: GGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp GGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTaGCCGCCCTGGCCGCCTGCGTGTGGCTGCCACACG +
Preference number: 3 (lower is better)
Translates to: GVEVRGHPALGP*PPWPPACGCHT
Trigger: CGTGTGGCAGCCACACGCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp GGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: GWRRRRTQGLLP*LGESAAALLLQ
Trigger: CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGGCTCCTTCCTTGGTaGGGGGAGTCGGCAGCCGCC +
Preference number: 3 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGLLPW*GESAAA
Trigger: GGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR GCA 72 bp TTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTaGAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACA +
Preference number: 3 (lower is better)
Translates to: FLGWGSRQPPCS*RAVPVARWDLT
Trigger: TGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp GCTGTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: AVGECLVLRAEQ*LGLLVPGVVGA
Trigger: GGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418829.5
3UTR CCA 72 bp AAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: KCIRGRQWRGGA*SSCFGSLAALA
Trigger: GGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp ACAGGCAAGGATGCCGGCTCTGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: TGKDAGSGRTDG*RRRRTQGLLPW
Trigger: CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp CCCCCAGGCCGCACCTGGCCCTTTTGTCCGCCCACCTaGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGG +
Preference number: 3 (lower is better)
Translates to: PPGRTWPFCPPT*PDLVSSNLVGW
Trigger: CCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCCAGGTGCGGCCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCGTGGTCATCCTGCTTaGGGTCCCTGGCCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: FPAISLAGAVCGDRNERTRGHPA*GPWPPW
Trigger: CCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp TTAGACAGGCAAGGATGCCGGCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: LDRQGCRLWTDR*MEAQADSGAPS
Trigger: GGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp GGGAGGGCGCGGGGGCTGCGAGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGG +
Preference number: 3 (lower is better)
Translates to: GRARGLRAQFRL*FQMHSGEAVAW
Trigger: CCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp TTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTaGGGACCGGAACGAGCGCACTGGGGGCTGGACAGG +
Preference number: 3 (lower is better)
Translates to: LVSSNLVGWGSL*GPERAHWGLDR
Trigger: CCTGTCCAGCCCCCAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGGCTCCTTCCTTGGTaGGGGGAGTCGGCAGCCGCC +
Preference number: 3 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGLLPW*GESAAA
Trigger: GGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR CCA 72 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTaGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGG +
Preference number: 3 (lower is better)
Translates to: TWPDLVSSNLVG*GSLWGPERAHW
Trigger: CCAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGC +
Preference number: 3 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSGAPS*VGGVGS
Trigger: GCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCGTGGTCATCCTGCTTaGGGTCCCTGGCCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRERGHPA*GPWPPW
Trigger: CCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR GCA 72 bp GGGGGCTGCGAGCTCAGTTTAGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGG +
Preference number: 3 (lower is better)
Translates to: GGCELSLDFGSK*IRGRQWRGGAW
Trigger: CCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTCGCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR GCA 72 bp GTTCTGAGTCACTCGCTGTCGGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAG +
Preference number: 3 (lower is better)
Translates to: VLSHSLSESVSY*EQSSGLGSSSQ
Trigger: CTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGCGAGTGACTCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
3UTR CCA 72 bp CTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTaGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: LWFQMHSGEAVA*RCVVILLWVPG
Trigger: GCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp GCACCTGGCCCTTTTGTCCGCCCACCTGGCCTGACTTaGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: APGPFVRPPGLT*FPAISLAGAVC
Trigger: ACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGC +
Preference number: 3 (lower is better)
Translates to: PAQMAATEYASNSFCPRKSGAPS*VGGVGS
Trigger: GCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGC +
Preference number: 3 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSGAPS*VGGVGS
Trigger: GCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR GCA 72 bp GCGGGAGTCTTAGTTAAGGCTTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGATGGATGGAGGCGCAG +
Preference number: 3 (lower is better)
Translates to: AGVLVKALDRQG*RLWTDRWMEAQ
Trigger: CTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAAAGCCTTAACTAAGACTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTTTCCAGCAATCTCGTaGGCTGGGGCAGTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: ATEYASNSFCPRKGGREDFPAIS*AGAVCG
Trigger: CCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR TCA 72 bp GATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTaGACGGTAAGCAGAGATCAAAAGCACAGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: DGVTDCRPAHAS*TVSRDQKHSSS
Trigger: ACTGCTGCTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR CCA 72 bp TTAGTTAAGGCTTTAGACAGGCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAGGCGCAGGCGGACTCA +
Preference number: 3 (lower is better)
Translates to: LVKALDRQGCRL*TDRWMEAQADS
Trigger: TGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAAAGCCTTAACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CCA 72 bp TTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTaGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: LDFGSKCIRGRQ*RGGAWSSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCCCACCTGGCCTGACTaGGTTTCCAGCAATCTCGTT +
Preference number: 3 (lower is better)
Translates to: PAQMAATEYASNSFCPRKPTWPD*VSSNLV
Trigger: AACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR GCA 72 bp AGAACGACGTGTGTAAATGACAGAATACCACCACCCTaGGCAGATGGCGGCCACAGAATACGCATCGAATTC +
Preference number: 3 (lower is better)
Translates to: RTTCVNDRIPPP*ADGGHRIRIEF
Trigger: GAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTACACACGTCGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR CCA 72 bp CCATTCCACCGTGCCCACCACGGGGCAAGTGTTTCATaGAGTTTTAAACTTCTGCTCCGAATGAATCATACG +
Preference number: 3 (lower is better)
Translates to: PFHRAHHGASVS*SFKLLLRMNHT
Trigger: CGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCATGAAACACTTGCCCCGTGGTGGGCACGGTGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTGGGTAAGTCCTTCCTaGCGTAAAACATCTGAATTA +
Preference number: 3 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREWVSPS*RKTSEL
Trigger: TAATTCAGATGTTTTACGCAAGGAAGGACTTACCCA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
3UTR GCA 72 bp TTCCCTTTTGGTTTCAAATACGTTTGTAGCCAGGGATaGTCACACCTTTTCTGCTGTCTTGGCCACATTTCT +
Preference number: 3 (lower is better)
Translates to: FPFGFKYVCSQG*SHLFCCLGHIS
Trigger: AGAAATGTGGCCAAGACAGCAGAAAAGGTGTGAGCATCCCTGGCTACAAACGTATTTGAAACCAAAAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR-3UTR CAA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATACCTTTTCTGCTGTCTaGGCCACATTTCTGCAGCAC +
Preference number: 3 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNTFSAV*ATFLQH
Trigger: GTGCTGCAGAAATGTGGCCAAGACAGCAGAAAAGGT...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3
3UTR TCA 72 bp CAAGTGTTTCATGGAGTTTTAAACTTCTGCTCCGAATaGATCATACGAATACAAAGTGGTCAAATCGTCTTT +
Preference number: 3 (lower is better)
Translates to: QVFHGVLNFCSE*IIRIQSGQIVF
Trigger: AAAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCATGAAACACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp TTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGCGCCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LGSSSQAWWGPARGPLPAPTRGW*AASGGC
Trigger: GCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGG...CGCGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPTRGW*AASGGC
Trigger: GCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCCCACCCCCGCCGCTaGTGCCGCTGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPHPRR*CRCSAL
Trigger: CAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTGGGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
74% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGGCGCCCGAGCTCTTaGCTGTGGTGGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGRPSS*LWWPCR
Trigger: GCGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGGTCTGCCAGAGACCTTaGCCTTCCCGCCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: AWAPRPRRGGGQRGARCPVCQRP*PSRRHL
Trigger: CAGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGAC...CGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413172.1
CDS-3UTR TCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCTGCTGCCAGGCTGCTaGGGGGCGTCGCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACLLPGC*GASLSG
Trigger: GCCGGAGAGCGACGCCCCTCAGCAGCCTGGCAGCAG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGCCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: CEQSSGLGSSSQAWWGPAPTRGW*AASGGC
Trigger: GCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGG...CGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp GTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGCCTGCAGCCGCATaGTCAGGGGGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: VAWAPRPRRGGGQRGARCPPAAA*SGGCRG
Trigger: TCCCCTACAACCCCCTGATCATGCGGCTGCAGGCGG...GCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCGGCCTCCGCGTCCTTaGCCTTGGCCGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACRPPRP*PWPAPP
Trigger: AGGAGGGGCCGGCCAAGGGCAAGGACGCGGAGGCCG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGGGGCTCCGAGCCCTTaGTGGGGGAGGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRGAPSP*WGRRRA
Trigger: AGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGCCCC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCCGCCTGCGTGTGGCTaGCACACGCCTGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRPPACG*HTPAVP
Trigger: GGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCGTCGGCGCCCAGGGTaGCTGGGGGCTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRRRPG*LGAWAH
Trigger: ATGGGCCCAAGCCCCCAGCCACCCTGGGCGCCGACG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGATGTCCTCCGGTGGTaGGGTGGGTGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPDVLRW*GGWPWG
Trigger: CCCCCAGGGCCACCCACCCCACCACCGGAGGACATC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCGCGTCCTTGCCCTTaGCCGGCCCCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPRPCP*PAPPRL
Trigger: AAGCCGAGGAGGGGCCGGCCAAGGGCAAGGACGCGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCGAGCTCTTGGCTGTaGTGGCCCTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPSSWL*WPCRSR
Trigger: GCGGGAGCGGCAGGGCCACCACAGCCAAGAGCTCGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAGCACGGACGCCTCCTaGGCTGTGGGCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSTDAS*AVGTPR
Trigger: CCTGGGGGTGCCCACAGCCCAGGAGGCGTCCGTGCT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAGCGGGCTGGGGGCTTaGCGAGGAAGGCATGGCCGG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSGLGA*RGRHGR
Trigger: CCGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCAGCCCGGAGCGGGCTaGGGGCTTGGCGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACQPGAG*GLGEEG
Trigger: GCCTTCCTCGCCAAGCCCCCAGCCCGCTCCGGGCTG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGCTCCGAGCCCTTGCTaGGGGAGGAGGCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPAPSPC*GRRRAP
Trigger: TGGAGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCCGGCGGGTCCGGGCTaGCGTGGTGAGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACPAGPG*RGEVRG
Trigger: ACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGTCCTCGTCCCAGGCGTaGTGGGGGCCAGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CEQSSGLGSSSQAWWGPASSSQA*WGPARG
Trigger: GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGA...CGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGAGCAGAGCAGTGGCTTaGGCTCCTCGTCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: AWAPRPRRGGGQRGARCPSRAVA*APRPRR
Trigger: ACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCT...CGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGCTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: AWAPRPRRGGGQRGARCPLRAEQ*LGLLVP
Trigger: TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG...CGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCCGCAGGCTGGCCCGTaGCCAGCAGGGGTGACGGTC +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACPQAGP*PAGVTV
Trigger: GACCGTCACCCCTGCTGGCCACGGGCCAGCCTGCGG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGCGGAATGGCGTGGAACCTaGTGCCCACCTGCGGACGAG +
Preference number: 4 (lower is better)
Translates to: LGSSSQAWWGPARGPLPAEWRGT*CPPADE
Trigger: CTCGTCCGCAGGTGGGCACCAGGTTCCACGCCATTC...CGCGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCTCGGTCAGGTCCCGTaGGGGCGGTGGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQLGQVP*GRWGRR
Trigger: CCTCCGCCCCCACCGCCCTCACGGGACCTGACCGAG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAGCCGGGCGAACGGGTaGGGAGGTGGAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSRANG*GGGGGP
Trigger: AGGTCCACCTCCACCTCCTCACCCGTTCGCCCGGCT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGGGGTGGGGAAGCCATaGCACCCGCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LRAEQWLGLLVPGVVGASGVGKP*HPPAAA
Trigger: TGCGGCTGCAGGCGGGTGTCATGGCTTCCCCACCCC...GCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGACACAGCGGGGCGTaGGCCAGCAGTCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGHSGA*ASSPRP
Trigger: GGGGCGGGGACTGCTGGCTCACGCCCCGCTGTGTCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCCGCTGGGGCTGGATaGTGGAGCCGGGCGACAGGT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAAGAG*WSRATG
Trigger: ACCTGTCGCCCGGCTCCATCATCCAGCCCCAGCGGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCACCACGGGCGGGAATaGAGCCTCCTCGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACHHGRE*SLLAGR
Trigger: GCGGCCAGCGAGGAGGCTGCATTCCCGCCCGTGGTG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGCAGGCACGTTCCAGTaGCCGGGCGTCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPAGTFQ*PGVGHH
Trigger: GTGATGGCCGACGCCCGGGCACTGGAACGTGCCTGC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGTGCTCGGGCACGGTaGTGTGCGGGGACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGARAR*CAGTWR
Trigger: TCGCCAAGTCCCCGCACAGCACCGTGCCCGAGCACC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGCATGGCCGGTGTCTaGTCGGGGCCGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGMAGV*SGPLWP
Trigger: CGGCCAGAGCGGCCCCGAGCAGACACCGGCCATGCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGGCCATGACACCCGCCTaGAGCCGCATGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLAMTPA*SRMIRG
Trigger: CCCCCTGATCATGCGGCTGCAGGCGGGTGTCATGGC...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAGTCGGCAGCCGCCCTaGTCCTGCAGGGCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSRQPP*SCRAVP
Trigger: AGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCCGCTGGCCCACCCTaGTCTGCATGCGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPAGPP*SACAPA
Trigger: TGCAGGAGCGCATGCAGAGCAGGGTGGGCCAGCGGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000405201.5
CDS-3UTR GCA 90 bp CAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTAACCTGGTGCCCACCTaGGGACGAGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QWLGLLVPGVVGASEGPANLVPT*GRGPVL
Trigger: GAGGACAGGCCCTCGTCCGCAGGTGGGCACCAGGTT...AGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAGCTCGGCGCTCTGCTaGGGGGTGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSSALC*GVMASS
Trigger: CGAGGAGGCCATCACCCCCCAGCAGAGCGCCGAGCT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGATGTCCTCCGGTGGTaGGGTGGGTGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRDVLRW*GGWPWG
Trigger: CCCCCAGGGCCACCCACCCCACCACCGGAGGACATC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCTCCCCCTCCTCCACTaGGGGCGCTGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACLPLLH*GRCCGL
Trigger: GAGACCGCAGCAGCGCCCCCAGTGGAGGAGGGGGAG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCGAGCTCTTGGCTGTaGTGGCCCTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPSSWL*WPCRSR
Trigger: GCGGGAGCGGCAGGGCCACCACAGCCAAGAGCTCGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGGCGCCCGAGCTCTTaGCTGTGGTGGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGRPSS*LWWPCR
Trigger: GCGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGGGGAGCTGGCTTGGTaGGAGCTGCGTCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRGELAW*ELRPPG
Trigger: CCCGGGAGGACGCAGCTCCCACCAAGCCAGCTCCCC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCGGGTTGGAGATGGTaGGTGGGCGCGGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRAGWRW*VGAAGR
Trigger: CCGTCCTGCCGCGCCCACCCACCATCTCCAACCCGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTCGCGCGGGATCTCATaGATGGAGCGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSRGIS*MERPAS
Trigger: GGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGCGTGGGCTCCCGCGTaGTCACGGGCGAACCTCGTG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACAWAPA*SRANLV
Trigger: CACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCGTGGGCTCCCGCGTaGTCACGGGCGAACCTCGTG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAWAPA*SRANLV
Trigger: CACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCAGCTCGCTGGGCCATaGCGGTGGCCGCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPQLAGP*RWPRCG
Trigger: ACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGGCGGTCCATGGCGGTaGCTGGGGTGCCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRGGPWR*LGCLVS
Trigger: CGACACCAGGCACCCCAGCCACCGCCATGGACCGCC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGAGTGCTGGTGGGCATaGGAGTGGGAGGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRECWWA*EWEAGR
Trigger: CCGCCCCGCCTCCCACTCCCATGCCCACCAGCACTC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGCAGTGGGTGGCAGGTaGGAATGTGGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPAVGGR*ECGSRA
Trigger: CGCCCGGCTGCCACATTCCCACCTGCCACCCACTGC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTAGCGGGCTGGGGGCTTaGCGAGGAAGGCATGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRSGLGA*RGRHGR
Trigger: CCGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCTCCGAGCCCTTGCTaGGGGAGGAGGCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRAPSPC*GRRRAP
Trigger: TGGAGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCACCCCTGGGGCGGTCTaGAGCAGCGGGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRTPGAV*SSGLDE
Trigger: CTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTTGCCCCCTTCGCTGTaGGGGGAGCCACGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRLPPSL*GEPRAG
Trigger: CCCGGCCCGTGGCTCCCCCCACAGCGAAGGGGGCAA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCTCCTCGTCCCAGGCGTaGTGGGGGCCAGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLRAEQWLGLLVPGVVGASSSQA*WGPARG
Trigger: GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGA...GGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTGGATCCCGACATGGTaGTGGGGGTCGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPWIPTW*WGSAGS
Trigger: GCTCCCCGCCGACCCCCACCACCATGTCGGGATCCA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGCACCTTGCTCTCCTTaGCCCGCCGCCGGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPAPCSP*PAAGGC
Trigger: ACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGGGGGTTGTAGGGGAATaGCGTGGAACCTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: AWAPRPRRGGGQRGARCPGVVGE*RGTWCP
Trigger: TGGGCACCAGGTTCCACGCCATTCCCCTACAACCCC...CGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTTCTTCTCTGCCTTaGGCGCCCCCTCGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPSSLP*APPRPW
Trigger: CCACGGCCGAGGGGGCGCTCAAGGCAGAGAAGAAGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCAGTGGCTTCTGGGGTaGGGCATTGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRQWLLG*GIGPGV
Trigger: GACCCCCGGGCCAATGCCTCACCCCAGAAGCCACTG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCTTGGGACAGGTCGATaGTGCCTCGGGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPLGTGR*CLGDPQ
Trigger: CTGCGGGTCCCCGAGGCATCATCGACCTGTCCCAAG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTGCTGTGGCGGCTGCTaGAGGGCTGGGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQCCGGC*RAGARW
Trigger: CCACCGCGCCCCAGCCCTTCAGCAGCCGCCACAGCA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCCGCTGGTGACCTTTaGCCCCTGGGGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPAGDL*PLGRSG
Trigger: TCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRVTTRW*PLTPGA
Trigger: CGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCAC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCGGGCAGGGGTGCGCTaGGCTGCTGTGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSRAGVR*AAVGGA
Trigger: GGCACCACCCACAGCAGCTCAGCGCACCCCTGCCCG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCCACCTGGCGAGGTaGGTGTGTGGTCACTCCGTC +
Preference number: 4 (lower is better)
Translates to: RAVAWAPRPRRGGGQRGARHLAR*VCGHSV
Trigger: GACGGAGTGACCACACACTCACCTCGCCAGGTGGCG...GGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413172.1
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCGCCACCTGGCGAGGTaGGTGTGTGGTCACTCCGTC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRHLAR*VCGHSV
Trigger: GACGGAGTGACCACACACTCACCTCGCCAGGTGGCG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCCGCCTGCAGCCGCATaGTCAGGGGGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: RAVAWAPRPRRGGGQRGAPPAAA*SGGCRG
Trigger: TCCCCTACAACCCCCTGATCATGCGGCTGCAGGCGG...GGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGCCGCTGGGGCTGGATaGTGGAGCCGGGCGACAGGT +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRAAGAG*WSRATG
Trigger: ACCTGTCGCCCGGCTCCATCATCCAGCCCCAGCGGC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCAGCTCGGGCAGGTATaGGTGGGACTCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPQLGQV*VGLWPQ
Trigger: CTGCGGCCAGAGTCCCACTCATACCTGCCCGAGCTG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCCCGTGGGGACAGCTaGTCCTGCTTCACTCCGCTG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPRGDS*SCFTPL
Trigger: CAGCGGAGTGAAGCAGGAGCAGCTGTCCCCACGGGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGTGGGGGCGGAGGCGTaGCCTCCCGCTTTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRVGAEA*PPALGA
Trigger: AGCTCCTAAAGCGGGAGGGCACGCCTCCGCCCCCAC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGAAAGGCTGCCCTCCTaGAGGCGCGGCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTERLPS*RRGVGS
Trigger: GGAGCCCACGCCGCGCCTGCAGGAGGGCAGCCTTTC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCCCCACCCCCGCCGCTaGTGCCGCTGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQPHPRR*CRCSAL
Trigger: CAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTGGGG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTTCACGGGGCCTGGCTaGTTGGGCCGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTFTGPG*LGRSSP
Trigger: GGGGGAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRALAPS*PPVGTQ
Trigger: CTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGCGCAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGSSSQAWWGPARGPLPAQSPSE*TEETEG
Trigger: ACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTG...CGCGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp TGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGGCGGCGTCCGGCGGTTaGAGTCTCCCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: CEQSSGLGSSSQAWWGPAAASGG*SLPPSA
Trigger: TGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGC...CGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTAGTCGGCAGCCGCCCTaGTCCTGCAGGGCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRSRQPP*SCRAVP
Trigger: AGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCCGCCTGCGTGTGGCTaGCACACGCCTGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGPPACG*HTPAVP
Trigger: GGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGTGCGTGGTCATCCTaGTTTGGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGAWSS*FGSLAA
Trigger: GGCGGCCAGGGACCCAAAGCAGGATGACCACGCACC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCACACCTCGTGCTCGCTaGGGGCGGCCGACATGGACA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPTPRAR*GRPTWT
Trigger: TGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGTGGCGTGGAACCTGGTaGCCACCTGCGGACGAGGGC +
Preference number: 4 (lower is better)
Translates to: CEQSSGLGSSSQAWWGPAWRGTW*PPADEG
Trigger: GCCCTCGTCCGCAGGTGGGCACCAGGTTCCACGCCA...CGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCATGCAGCCTCCTCGCTaGCCGCCGCCGGCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACMQPPR*PPPALS
Trigger: AGAAAGCGCCGGCGGCGGCCAGCGAGGAGGCTGCAT...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGGTGGCTGGGGGCTTaGGCCCATTCTGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGWLGA*AHSALC
Trigger: ACACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGCGCCCAGGGTGGCTaGGGGCTTGGGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGAQGG*GLGPIL
Trigger: CAGAATGGGCCCAAGCCCCCAGCCACCCTGGGCGCC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGATGTCCTCCGGTGGTaGGGTGGGTGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTDVLRW*GGWPWG
Trigger: CCCCCAGGGCCACCCACCCCACCACCGGAGGACATC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCGGGGTGGGCTCAGTaGGGGCCGGGATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPGWAQ*GPGCPP
Trigger: CGGAGGACATCCCGGCCCCCACTGAGCCCACCCCGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCGAGCTCTTGGCTGTaGTGGCCCTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTPSSWL*WPCRSR
Trigger: GCGGGAGCGGCAGGGCCACCACAGCCAAGAGCTCGG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGCCGGGCAGTGTCATaGAGGCCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGRAVS*RPRGSG
Trigger: CCCACTGCCCCTGGGCCTCCATGACACTGCCCGGCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGAGGCGGGTTGGAGATaGTGGGTGGGCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGREAGWR*WVGAAG
Trigger: TCCTGCCGCGCCCACCCACCATCTCCAACCCGCCTC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTCGCGCGGGATCTCATaGATGGAGCGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRSRGIS*MERPAS
Trigger: GGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGAACCTCGTGGGAGGTaGCCGGCAAAGGGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGREPRGR*PAKGAP
Trigger: CGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTAGGCAAGGCGGTCCATaGCGGTGGCTGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRRQGGP*RWLGCL
Trigger: CAGGCACCCCAGCCACCGCCATGGACCGCCTTGCCT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCGGGCGATGGTGGCGTaGCCAGAGACAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRAMVA*PETGGT
Trigger: AGTGCCTCCTGTCTCTGGCCACGCCACCATCGCCCG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGAGGTAGAGGTCACTaGGTGGGCGGCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGGRGH*VGGGGP
Trigger: TGGACCTCCGCCGCCCACCCAGTGACCTCTACCTCC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTGCCCCCTTCGCTGTaGGGGGAGCCACGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSLPPSL*GEPRAG
Trigger: CCCGGCCCGTGGCTCCCCCCACAGCGAAGGGGGCAA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCACTCCGGGAGTGCCCTaGCTCCGTCATGCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRTPGVP*LRHALR
Trigger: CCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGCCCTCCAGCCCCATGTTaGTGCTGGCATGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLLVPGVVGASEGPAARPPAPC*CWHVPA
Trigger: TGCAGGAACATGCCAGCACCAACATGGGGCTGGAGG...GCGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCTCCTTGGACAGCCGTaGCGGCACCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPLLGQP*RHQLQL
Trigger: GAGCTGGAGCTGGTGCCGCCACGGCTGTCCAAGGAG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCAGCGGCAGCTCCACCTaGGGCCCCAGGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACSGSST*GPRPSR
Trigger: TCTGGAAGGCCTGGGGCCCCAGGTGGAGCTGCCGCT...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGAGCGTAGGAGAAGGCTaGGGGGTCCGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSVGEG*GVRGMR
Trigger: CCGCATGCCCCGGACCCCTCAGCCTTCTCCTACGCT...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTGGAGCCGCGGTATGTaGTGGCGCTGTCCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRWSRGM*WRCPRA
Trigger: TGCCCTCGGACAGCGCCATCACATACCGCGGCTCCA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGCCGGGGCTGCCGATaGGGGAGCGTACGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGRGCR*GSVRRA
Trigger: AGCACGACGTACGCTCCCTCATCGGCAGCCCCGGCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCGGGGTAGCCGCGGATaGGGTAGGGTGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRRGSRG*GRVGTG
Trigger: ACCTGTACCCACCCTACCTCATCCGCGGCTACCCCG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTCCGGGCTGGCGTGGTaGGGTGCGAGGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRSGLAW*GARFFA
Trigger: TGCGAAGAACCTCGCACCTCACCACGCCAGCCCGGA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGTGAGCTCACAGGGCTaGCGGGCTCCACCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTVSSQG*RAPPLR
Trigger: CCGAAGGGGTGGAGCCCGTCAGCCCTGTGAGCTCAC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGTGAGCTCACAGGGCTaGCGGGCTCCACCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRVSSQG*RAPPLR
Trigger: CCGAAGGGGTGGAGCCCGTCAGCCCTGTGAGCTCAC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRVTTRW*PLTPGA
Trigger: CGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCAC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTGTGCTGGGCCAGGGTaGCCACCCGCTGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRCAGPG*PPAGDL
Trigger: AAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTGTGCTGGGCCAGGGTaGCCACCCGCTGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACCAGPG*PPAGDL
Trigger: AAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCGGGCAGGGGTGCGCTaGGCTGCTGTGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQRAGVR*AAVGGA
Trigger: GGCACCACCCACAGCAGCTCAGCGCACCCCTGCCCG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGGGTGGGGAAGCCATaGCACCCGCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGVGKP*HPPAAA
Trigger: TGCGGCTGCAGGCGGGTGTCATGGCTTCCCCACCCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGGGTGGGGAAGCCATaGCACCCGCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGVGKP*HPPAAA
Trigger: TGCGGCTGCAGGCGGGTGTCATGGCTTCCCCACCCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGGACACAGCGGGGCGTaGGCCAGCAGTCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLGHSGA*ASSPRP
Trigger: GGGGCGGGGACTGCTGGCTCACGCCCCGCTGTGTCC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCAGCTCGGGCAGGTATaGGTGGGACTCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRQLGQV*VGLWPQ
Trigger: CTGCGGCCAGAGTCCCACTCATACCTGCCCGAGCTG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCGATGGCCGACCAGTTaGGGCCGTGTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRWPTS*GRVPGD
Trigger: GTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCTCCACTGGGGGCGCTaGTGCGGTCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRLHWGR*CGLLLL
Trigger: AAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTGGAG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCGGCCTCCGCGTCCTTaGCCTTGGCCGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQRPPRP*PWPAPP
Trigger: AGGAGGGGCCGGCCAAGGGCAAGGACGCGGAGGCCG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCCCTCCTTCTTCTCTaGCTTGAGCGCCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRALLLL*LERPLG
Trigger: GCCGAGGGGGCGCTCAAGGCAGAGAAGAAGGAGGGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCCCCGTGGGGACAGCTaGTCCTGCTTCACTCCGCTG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRPRGDS*SCFTPL
Trigger: CAGCGGAGTGAAGCAGGAGCAGCTGTCCCCACGGGG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCTGAGGAGATGGCTCTaGCCACGCGGCCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPLRRWL*PRGPPS
Trigger: TGATGGAGGGCCGCGTGGGCAGAGCCATCTCCTCAG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGCAGGCACGTTCCAGTaGCCGGGCGTCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRAGTFQ*PGVGHH
Trigger: GTGATGGCCGACGCCCGGGCACTGGAACGTGCCTGC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGAAAGGCTGCCCTCCTaGAGGCGCGGCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSERLPS*RRGVGS
Trigger: GGAGCCCACGCCGCGCCTGCAGGAGGGCAGCCTTTC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTCGGGCACGGTGCTGTaGGGGGACTTGGCGATCTCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSGTVL*GDLAIS
Trigger: TGAGATCGCCAAGTCCCCGCACAGCACCGTGCCCGA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGTAGTAGGCAGCGGCTaGGTCCAGAGGGATGCCGCG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRVVGSG*VQRDAA
Trigger: CGCGGCATCCCTCTGGACGCAGCCGCTGCCTACTAC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGTAGTAGGCAGCGGCTaGGTCCAGAGGGATGCCGCG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRVVGSG*VQRDAA
Trigger: CGCGGCATCCCTCTGGACGCAGCCGCTGCCTACTAC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCACCCCCGCCGCTGCTaGCGCTGCTCTGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRHPRRC*RCSALY
Trigger: GTACAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCCCCACCCCCGCCGCTaGTGCCGCTGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPPHPRR*CRCSAL
Trigger: CAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTGGGG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGTTCACGGGGCCTGGCTaGTTGGGCCGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGFTGPG*LGRSSP
Trigger: GGGGGAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAA...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCAGCCCCATGTTGGTaGTGGCATGTTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLPAPCW*WHVPAP
Trigger: CGGTGCAGGAACATGCCAGCACCAACATGGGGCTGG...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR GCA 90 bp CAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTTTCGGCTGCTGGGTCTaGCAGAGACCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QWLGLLVPGVVGASEGPAFGCWV*QRPWPS
Trigger: GGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAA...AGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCCATGACACCCGCCTaGAGCCGCATGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRAMTPA*SRMIRG
Trigger: CCCCCTGATCATGCGGCTGCAGGCGGGTGTCATGGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCGCTGGCCCACCCTCTaGATGCGCTCCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTRWPTL*MRSCSS
Trigger: CGAGCTGCAGGAGCGCATGCAGAGGGTGGGCCAGCG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404621.5
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGCTGCTGCGGGGCATaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGCCGA*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCCGGGGTGGGCTCAGTaGGGGCCGGGATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQPGWAQ*GPGCPP
Trigger: CGGAGGACATCCCGGCCCCCACTGAGCCCACCCCGG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCTCCCCCTCCTCCACTaGGGGCGCTGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQLPLLH*GRCCGL
Trigger: GAGACCGCAGCAGCGCCCCCAGTGGAGGAGGGGGAG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGCCGGGCAGTGTCATaGAGGCCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGRAVS*RPRGSG
Trigger: CCCACTGCCCCTGGGCCTCCATGACACTGCCCGGCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGTTGGAGATGGTGGGTaGGCGCGGCAGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAVGDGG*ARQDGP
Trigger: CGGCCCGTCCTGCCGCGCCCACCCACCATCTCCAAC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAGCACGGACGCCTCCTaGGCTGTGGGCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASTDAS*AVGTPR
Trigger: CCTGGGGGTGCCCACAGCCCAGGAGGCGTCCGTGCT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTGCTGGCTGAGGAGATaGCTCTGCCCACGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRCWLRR*LCPRGP
Trigger: AGGGCCGCGTGGGCAGAGCCATCTCCTCAGCCAGCA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGCCACCAGGCCCTCATaGGCCGGCTTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACATRPS*AGFSFR
Trigger: CCTGAAGCTGAAGCCGGCCCATGAGGGCCTGGTGGC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCCACCAGGCCCTCATaGGCCGGCTTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRATRPS*AGFSFR
Trigger: CCTGAAGCTGAAGCCGGCCCATGAGGGCCTGGTGGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGCGGGATCTCATGGATaGAGCGGCCCGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPAGSHG*SGPPPS
Trigger: TGAAGGAGGCGGGCCGCTCCATCCATGAGATCCCGC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGAACCTCGTGGGAGGTaGCCGGCAAAGGGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTEPRGR*PAKGAP
Trigger: CGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGCGTGGGCTCCCGCGTaGTCACGGGCGAACCTCGTG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGAWAPA*SRANLV
Trigger: CACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGGCGAGATGGGGTGTaGGTGGTGCTCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGRDGV*VVLGHG
Trigger: ACCGTGCCCGAGCACCACCCACACCCCATCTCGCCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGTGGCTGGGGTGCCTaGTGTCGGGGGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQGGWGA*CRGHEH
Trigger: GTGCTCGTGCCCCCGACACCAGGCACCCCAGCCACC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGCGGTCCATGGCGGTaGCTGGGGTGCCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGGPWR*LGCLVS
Trigger: CGACACCAGGCACCCCAGCCACCGCCATGGACCGCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTGCTGGAGGGCATCCTaGGTCCGAGGGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRCWRAS*VRGEMG
Trigger: GCCCATCTCCCCTCGGACCCAGGATGCCCTCCAGCA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTGCTGGAGGGCATCCTaGGTCCGAGGGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACCWRAS*VRGEMG
Trigger: GCCCATCTCCCCTCGGACCCAGGATGCCCTCCAGCA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGTGAGGAGGTGGAGGTaGACCTCAGGACCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACVRRWR*TSGPWA
Trigger: CGCCCACGGTCCTGAGGTCCACCTCCACCTCCTCAC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTGGCAGGTGGGAATGTaGCAGCCGGGCGAACGGGTG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACWQVGM*QPGERV
Trigger: CACCCGTTCGCCCGGCTGCCACATTCCCACCTGCCA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCGGGCGATGGTGGCGTaGCCAGAGACAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACRAMVA*PETGGT
Trigger: AGTGCCTCCTGTCTCTGGCCACGCCACCATCGCCCG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCCGGCGGGTCCGGGCTaGCGTGGTGAGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQPAGPG*RGEVRG
Trigger: ACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCAAGCTTCACGGGGCCTaGCTGCTTGGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRKLHGA*LLGPQL
Trigger: GAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAAGCTT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTGGACGAGGGCTaGCTCTCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGLDEG*LSGSGR
Trigger: GCGGCCGCTGCCTGAGAGCCAGCCCTCGTCCAGCCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCACCTCACTGATGTGCTaGGCCAGGGTGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPTSLMC*ARVTTR
Trigger: GCGGGTGGTCACCCTGGCCCAGCACATCAGTGAGGT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCAGGACGGGGCAGCTaGCCCCAGGGAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPGRGS*PQGRSR
Trigger: TCTACTCCTTCCCTGGGGCCAGCTGCCCCGTCCTGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGTAGAGGTCACTGGGTaGGCGGCGGAGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRVEVTG*AAEVQD
Trigger: GTCCTGGACCTCCGCCGCCCACCCAGTGACCTCTAC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGGGCGAGGTGAGTGTGTaGTCACTCCGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLGEVSV*SLRPSA
Trigger: TGCTGACGGACGGAGTGACCACACACTCACCTCGCC...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413172.1
CDS-3UTR CCA 90 bp TGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGCTTCCCGCCGCCACCTaGCGAGGTGAGTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CEQSSGLGSSSQAWWGPALPAAT*RGECVV
Trigger: GACCACACACTCACCTCGCCAGGTGGCGGCGGGAAG...CGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413172.1
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGTCTGCCAGAGACCTTaGCCTTCCCGCCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRVCQRP*PSRRHL
Trigger: CAGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGAC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGAGGCCCGGTGGGGGTaGGGAAGCCATGACACCCGC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSEARWG*GSHDTR
Trigger: GCGGGTGTCATGGCTTCCCCACCCCCACCGGGCCTC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGAGGCCCGGTGGGGGTaGGGAAGCCATGACACCCGC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGEARWG*GSHDTR
Trigger: GCGGGTGTCATGGCTTCCCCACCCCCACCGGGCCTC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: RAVAWAPRPRRGGGQRGALRAEQ*LGLLVP
Trigger: TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG...GGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCTGGCCGCCTGCGTGTaGCTGCCACACGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSLAACV*LPHACR
Trigger: ACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGTGGTCATCCTGCTTTaGGTCCCTGGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRVVILL*VPGRPG
Trigger: GCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCAC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCATTCGGGGGAGGCAGTaGCGTGGAGGTGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPIRGRQ*RGGAWS
Trigger: TGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCCCCCAGGCCGCACCTaGCCCTTTTGTCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGPPGRT*PFCPPT
Trigger: GGTGGGCGGACAAAAGGGCCAGGTGCGGCCTGGGGG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTCAGATCCCGCAGGCTaGCCCGTGGCCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSDPAG*PVASRG
Trigger: ACCCCTGCTGGCCACGGGCCAGCCTGCGGGATCTGA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGAGCGGCAGCTCCACCTaGGGCCCCAGGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSGSST*GPRPSR
Trigger: TCTGGAAGGCCTGGGGCCCCAGGTGGAGCTGCCGCT...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCAGCGTCGTACAGCATaGGCGGGATCACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPQRRTA*AGSRPA
Trigger: AGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCGAATGGCGTGGAACCTaGTGCCCACCTGCGGACGAG +
Preference number: 4 (lower is better)
Translates to: RAVAWAPRPRRGGGQRGAEWRGT*CPPADE
Trigger: CTCGTCCGCAGGTGGGCACCAGGTTCCACGCCATTC...GGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCCGTGCACTCGCTCTTaGCGGGCTCCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQPCTRS*RAPRPS
Trigger: GGAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCAGTGGCTTCTGGGGTaGGGCATTGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSQWLLG*GIGPGV
Trigger: GACCCCCGGGCCAATGCCTCACCCCAGAAGCCACTG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCAGTGGCTTCTGGGGTaGGGCATTGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGQWLLG*GIGPGV
Trigger: GACCCCCGGGCCAATGCCTCACCCCAGAAGCCACTG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCCAGCTCAGGCACAATaGCCGGGGCGCCGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRPAQAQ*PGRRAQ
Trigger: TTGCGCGCGGCGCCCCGGTCATTGTGCCTGAGCTGG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTGCTGTGGCGGCTGCTaGAGGGCTGGGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWCCGGC*RAGARW
Trigger: CCACCGCGCCCCAGCCCTTCAGCAGCCGCCACAGCA...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAGCCGGGCGAACGGGTaGGGAGGTGGAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSRANG*GGGGGP
Trigger: AGGTCCACCTCCACCTCCTCACCCGTTCGCCCGGCT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCCGCTGGTGACCTTTaGCCCCTGGGGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPAGDL*PLGRSG
Trigger: TCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCCCGCTGGTGACCTTTaGCCCCTGGGGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAPAGDL*PLGRSG
Trigger: TCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQVTTRW*PLTPGA
Trigger: CGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCAC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGVTTRW*PLTPGA
Trigger: CGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCAC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTGTGCTGGGCCAGGGTaGCCACCCGCTGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTCAGPG*PPAGDL
Trigger: AAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCGGGCAGGGGTGCGCTaGGCTGCTGTGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWRAGVR*AAVGGA
Trigger: GGCACCACCCACAGCAGCTCAGCGCACCCCTGCCCG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCGGGCAGGGGTGCGCTaGGCTGCTGTGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLRAGVR*AAVGGA
Trigger: GGCACCACCCACAGCAGCTCAGCGCACCCCTGCCCG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCGGGCAGGGGTGCGCTaGGCTGCTGTGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWRAGVR*AAVGGA
Trigger: GGCACCACCCACAGCAGCTCAGCGCACCCCTGCCCG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGGGTGGGGAAGCCATaGCACCCGCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGVGKP*HPPAAA
Trigger: TGCGGCTGCAGGCGGGTGTCATGGCTTCCCCACCCC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGACACAGCGGGGCGTaGGCCAGCAGTCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGHSGA*ASSPRP
Trigger: GGGGCGGGGACTGCTGGCTCACGCCCCGCTGTGTCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGCTGCTCTACCATGGTaGTCTCTCGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPAALPW*SLGPRG
Trigger: ACCGCGTGGACCGAGAGATCACCATGGTAGAGCAGC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGCTGCTGCTGGCTCTTaGCGCGGCGCCGATAGCTCC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSAAAGS*RGADSS
Trigger: GGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCTTTCTCCTCCTGGCTaGTGCGGGGCATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRLSPPG*CGAWAA
Trigger: AGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCACCACGGGCGGGAATaGAGCCTCCTCGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRHHGRE*SLLAGR
Trigger: GCGGCCAGCGAGGAGGCTGCATTCCCGCCCGTGGTG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGCTTGGGCCCATTCTaGCCTGTGTCCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGLGPF*PVSLAA
Trigger: GGCCGCCAAGGACACAGGGCAGAATGGGCCCAAGCC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCGGCCTCCGCGTCCTTaGCCTTGGCCGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWRPPRP*PWPAPP
Trigger: AGGAGGGGCCGGCCAAGGGCAAGGACGCGGAGGCCG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCGGCCTCCGCGTCCTTaGCCTTGGCCGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLRPPRP*PWPAPP
Trigger: AGGAGGGGCCGGCCAAGGGCAAGGACGCGGAGGCCG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCATGGCAGCCGCTCGCTaGTTCAGCTGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPMAAAR*FSCFRS
Trigger: GGACCTGAAGCAGCTGAAGCAGCGAGCGGCTGCCAT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTCCGGCTGCAGGTTTTaGGGTGGCGGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASGCRF*GGGGAG
Trigger: CCCAGCCCCACCGCCACCGCAAAACCTGCAGCCGGA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCTTCTGGGCCTCGGCTaGGAAGGCTGGGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPLLGLG*EGWEEH
Trigger: GTGTTCTTCCCAGCCTTCGCAGCCGAGGCCCAGAAG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTCGAGGACGCTGGGGTaGTTGGCAGAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSRTLG*LAEEMR
Trigger: CCTCATCTCCTCTGCCAAGCACCCCAGCGTCCTCGA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCTGAGGAGATGGCTCTaGCCACGCGGCCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRLRRWL*PRGPPS
Trigger: TGATGGAGGGCCGCGTGGGCAGAGCCATCTCCTCAG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCATCACATCCAGCGGGTaGACGGGTGGGAACGTCCGG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACITSSG*TGGNVR
Trigger: CCGGACGTTCCCACCCGTGCACCCGCTGGATGTGAT...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGCAGGCACGTTCCAGTaGCCGGGCGTCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSAGTFQ*PGVGHH
Trigger: GTGATGGCCGACGCCCGGGCACTGGAACGTGCCTGC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGCAGGCACGTTCCAGTaGCCGGGCGTCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGAGTFQ*PGVGHH
Trigger: GTGATGGCCGACGCCCGGGCACTGGAACGTGCCTGC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGAAAGGCTGCCCTCCTaGAGGCGCGGCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRERLPS*RRGVGS
Trigger: GGAGCCCACGCCGCGCCTGCAGGAGGGCAGCCTTTC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCAGGGGGATGTGGCTaGGATACAGGTCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPGGCG*DTGPRH
Trigger: GTGGCGTGGACCTGTATCGCAGCCACATCCCCCTGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCGCAGCGTAGTTGAGTaGCAGCGAGGACTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTRSVVE*QRGLAG
Trigger: CCCCGCGAGTCCTCGCTGGCACTCAACTACGCTGCG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTGGCGGTGGCTGGGGTaGCTGGTGTCGGGGGCACGA +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQWRWLG*LVSGAR
Trigger: TCGTGCCCCCGACACCAGGCACCCCAGCCACCGCCA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCTCCAGATGGGTGCGTaGTCCACCGTCGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRLQMGA*STVVVD
Trigger: GTCCACCACGACGGTGGAGCACGCACCCATCTGGAG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCACCCCCGCCGCTGCTaGCGCTGCTCTGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGHPRRC*RCSALY
Trigger: GTACAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTCCCCACCCCCGCCGCTaGTGCCGCTGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLPHPRR*CRCSAL
Trigger: CAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTGGGG...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGGGCTCCGAGCCCTTaGTGGGGGAGGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVGAPSP*WGRRRA
Trigger: AGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGCCCC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCGGGGCTGTAGCTGCTaGCGTGGTAACCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRGCSC*RGNPEN
Trigger: GTTCTCTGGGTTACCACGGCAGCAGCTACAGCCCCG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAALAPS*PPVGTQ
Trigger: CTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGCCATGACACCCGCCTaGAGCCGCATGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTAMTPA*SRMIRG
Trigger: CCCCCTGATCATGCGGCTGCAGGCGGGTGTCATGGC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCGCCATGACACCCGCCTaGAGCCGCATGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLRAEQWLGLLVPGVVGAAMTPA*SRMIRG
Trigger: CCCCCTGATCATGCGGCTGCAGGCGGGTGTCATGGC...GGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAGTCGGCAGCCGCCCTaGTCCTGCAGGGCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSRQPP*SCRAVP
Trigger: AGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCGCCTGCGTGTGGCTaGCACACGCCTGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPPACG*HTPAVP
Trigger: GGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCCGCCTGCGTGTGGCTaGCACACGCCTGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLPPACG*HTPAVP
Trigger: GGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGGTCGGCGGGGAGCTaGTCCCAGGCCCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGSAGS*SQAPIS
Trigger: GCTTATTGGGGCCTGGGAGCAGCTCCCCGCCGACCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTGCACCAGGCTGCGGTaGTTCGACTCGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRCTRLR*FDSMGG
Trigger: GCCGCCCATCGAGTCGAAGCACCGCAGCCTGGTGCA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGCAGCTCGCGCTGCTTaGGGATCTCAGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPAARAA*GSQGTA
Trigger: AGCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCTCTGCATGCGCTCCTaGAGCTCGCGCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTLCMRS*SSRCLR
Trigger: CCGCAAGCAGCGCGAGCTGCAGGAGCGCATGCAGAG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCGCTGGCCCACCCTCTaGATGCGCTCCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRWPTL*MRSCSS
Trigger: CGAGCTGCAGGAGCGCATGCAGAGGGTGGGCCAGCG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGGCCGCCACCCATGAGTaGCTTTCTAATTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: AWAPRPRRGGGQRGARCPAATHE*LSNYGL
Trigger: GAGGCCATAATTAGAAAGGCACTCATGGGTGGCGGC...CGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGCTGCTGCGGGGCATaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGCCGA*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGCTGCTGCGGGGCATaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGCCGA*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTCATCTTTCTCCTCCTaGCTGCTGCGGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPSSFSS*LLRGMG
Trigger: GCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAGCTCGGCGCTCTGCTaGGGGGTGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASSALC*GVMASS
Trigger: CGAGGAGGCCATCACCCCCCAGCAGAGCGCCGAGCT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAGCTCGGCGCTCTGCTaGGGGGTGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSSALC*GVMASS
Trigger: CGAGGAGGCCATCACCCCCCAGCAGAGCGCCGAGCT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGAGCTCGGCGCTCTGCTaGGGGGTGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGSSALC*GVMASS
Trigger: CGAGGAGGCCATCACCCCCCAGCAGAGCGCCGAGCT...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSPPSGR*PTSCGR
Trigger: ACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCATGCAGCCTCCTCGCTaGCCGCCGCCGGCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGMQPPR*PPPALS
Trigger: AGAAAGCGCCGGCGGCGGCCAGCGAGGAGGCTGCAT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGCCCAGGGTGGCTaGGGGCTTGGGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRGAQGG*GLGPIL
Trigger: CAGAATGGGCCCAAGCCCCCAGCCACCCTGGGCGCC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGATGTCCTCCGGTGGTaGGGTGGGTGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPDVLRW*GGWPWG
Trigger: CCCCCAGGGCCACCCACCCCACCACCGGAGGACATC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCGGGATGTCCTCCGGTaGTGGGGTGGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRRDVLR*WGGWPW
Trigger: CCAGGGCCACCCACCCCACCACCGGAGGACATCCCG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCGGGGTGGGCTCAGTaGGGGCCGGGATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPGWAQ*GPGCPP
Trigger: CGGAGGACATCCCGGCCCCCACTGAGCCCACCCCGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCCGGGGTGGGCTCAGTaGGGGCCGGGATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWPGWAQ*GPGCPP
Trigger: CGGAGGACATCCCGGCCCCCACTGAGCCCACCCCGG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGCGCCCGAGCTCTTaGCTGTGGTGGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWGRPSS*LWWPCR
Trigger: GCGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCTGGAGTCGCTGTCCTaGGGGGCGCCCGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSLESLS*GAPELL
Trigger: CAAGAGCTCGGGCGCCCCCCAGGACAGCGACTCCAG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCAGGTCCAGTGGCTTCTaGGGTGAGGCATTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRSSGF*GEALAR
Trigger: CCGGGCCAATGCCTCACCCCAGAAGCCACTGGACCT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGGAGCTGGCTTGGTaGGAGCTGCGTCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGELAW*ELRPPG
Trigger: CCCGGGAGGACGCAGCTCCCACCAAGCCAGCTCCCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCCGGGCAGTGTCATaGAGGCCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGRAVS*RPRGSG
Trigger: CCCACTGCCCCTGGGCCTCCATGACACTGCCCGGCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCCTCTCGAGGACGCTaGGGTGCTTGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRASRGR*GAWQRR
Trigger: TCTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCCAGCCTGGCCCCGTaGGGACAGCTGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPSLAP*GQLLLL
Trigger: AAGCAGGAGCAGCTGTCCCCACGGGGCCAGGCTGGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTGTCATAGGTGCGCTTaGGGGCGGCCGTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRCHRCA*GRPSHG
Trigger: CCCATGAGACGGCCGCCCCCAAGCGCACCTATGACA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCCGCTTTAGGAGCTTaGCCTCCCGACGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPALGA*PPDAGS
Trigger: ACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCAGCGGGTGCACGGGTaGGAACGTCCGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWQRVHG*ERPAGA
Trigger: AGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCAGCGGGTGCACGGGTaGGAACGTCCGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWQRVHG*ERPAGA
Trigger: AGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCAGCGGGTGCACGGGTaGGAACGTCCGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVQRVHG*ERPAGA
Trigger: AGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGAACCTCGTGGGAGGTaGCCGGCAAAGGGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAEPRGR*PAKGAP
Trigger: CGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCACGGGCGAACCTCGTaGGAGGTGGCCGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAHGRTS*EVAGKG
Trigger: CCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCTCATAGGGCGAGATaGGGTGTGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAHRAR*GVGGAR
Trigger: CCGAGCACCACCCACACCCCATCTCGCCCTATGAGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAAGGCCAGGGGGATGTaGCTGCGATACAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPKARGM*LRYRST
Trigger: CGTGGACCTGTATCGCAGCCACATCCCCCTGGCCTT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGCGGTGGCCGCGTTGTaGTGCATCTGCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTAVAAL*CICCEV
Trigger: CACCTCGCAGCAGATGCACCACAACGCGGCCACCGC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCAGCTCGCTGGGCCATaGCGGTGGCCGCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQQLAGP*RWPRCG
Trigger: ACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCAGCTCGCTGGGCCATaGCGGTGGCCGCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGQLAGP*RWPRCG
Trigger: ACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGTCCATGGCGGTGGCTaGGGTGCCTGGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRVHGGG*GAWCRG
Trigger: CCCCCGACACCAGGCACCCCAGCCACCGCCATGGAC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCCATGGCGGTGGCTaGGGTGCCTGGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQVHGGG*GAWCRG
Trigger: CCCCCGACACCAGGCACCCCAGCCACCGCCATGGAC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGAGTGCTGGTGGGCATaGGAGTGGGAGGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPECWWA*EWEAGR
Trigger: CCGCCCCGCCTCCCACTCCCATGCCCACCAGCACTC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCATGGGCGAGTGCTGGTaGGCATGGGAGTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRMGECW*AWEWEA
Trigger: CGCCTCCCACTCCCATGCCCACCAGCACTCGCCCAT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGAGATGGGCGAGTGCTaGTGGGCATGGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSREMGEC*WAWEWE
Trigger: CTCCCACTCCCATGCCCACCAGCACTCGCCCATCTC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGCAGTGGGTGGCAGGTaGGAATGTGGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAAVGGR*ECGSRA
Trigger: CGCCCGGCTGCCACATTCCCACCTGCCACCCACTGC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAGCGGGCTGGGGGCTTaGCGAGGAAGGCATGGCCGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSGLGA*RGRHGR
Trigger: CCGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCAGCCCGGAGCGGGCTaGGGGCTTGGCGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWQPGAG*GLGEEG
Trigger: GCCTTCCTCGCCAAGCCCCCAGCCCGCTCCGGGCTG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCAGCCCGGAGCGGGCTaGGGGCTTGGCGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVQPGAG*GLGEEG
Trigger: GCCTTCCTCGCCAAGCCCCCAGCCCGCTCCGGGCTG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCGGGCGATGGTGGCGTaGCCAGAGACAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRRAMVA*PETGGT
Trigger: AGTGCCTCCTGTCTCTGGCCACGCCACCATCGCCCG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGGTGCGGGCGATGGTaGCGTGGCCAGAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGCGRW*RGQRQE
Trigger: CTCCTGTCTCTGGCCACGCCACCATCGCCCGCACCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCCGGCGGGTCCGGGCTaGCGTGGTGAGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLPAGPG*RGEVRG
Trigger: ACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCTCTTCCAGGTGCTTaGGGAGCCCCTTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRALPGA*GAPCRG
Trigger: CCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCTCTTCCAGGTGCTTaGGGAGCCCCTTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRALPGA*GAPCRG
Trigger: CCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGGGCTGGACGAGGGCTaGCTCTCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLGLDEG*LSGSGR
Trigger: GCGGCCGCTGCCTGAGAGCCAGCCCTCGTCCAGCCC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTCTGGAGCAGCGGGCTaGACGAGGGCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSGAAG*TRAGSQ
Trigger: CTGAGAGCCAGCCCTCGTCCAGCCCGCTGCTCCAGA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTTGCCCCCTTCGCTGTaGGGGGAGCCACGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLPPSL*GEPRAG
Trigger: CCCGGCCCGTGGCTCCCCCCACAGCGAAGGGGGCAA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPLAEEG*RLAGVA
Trigger: GGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCGCCCCATGTTGGTGCTaGCATGTTCCTGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: QSSGLGSSSQAWWGPARGAPCWC*HVPAPP
Trigger: AGGCGGTGCAGGAACATGCCAGCACCAACATGGGGC...GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CCA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGTGGCTTTTCGGCTGCTaGGTCTGCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLWLFGC*VCQRPW
Trigger: CCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCA...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGAGGCCCGGTGGGGGTaGGGAAGCCATGACACCCGC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPEARWG*GSHDTR
Trigger: GCGGGTGTCATGGCTTCCCCACCCCCACCGGGCCTC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCATTCGGGGGAGGCAGTaGCGTGGAGGTGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACIRGRQ*RGGAWS
Trigger: TGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGAGCGCACTGGGGGCTaGACAGGGCCTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSERTGG*TGPASI
Trigger: GATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGCTGGGGCAGTCTGTaGGGACCGGAACGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGWGSL*GPERAH
Trigger: GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGCTGGGGCAGTCTGTaGGGACCGGAACGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGWGSL*GPERAH
Trigger: GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCTGGGGCAGTCTGTaGGGACCGGAACGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQGWGSL*GPERAH
Trigger: GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCCCCCAGGCCGCACCTaGCCCTTTTGTCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRPPGRT*PFCPPT
Trigger: GGTGGGCGGACAAAAGGGCCAGGTGCGGCCTGGGGG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGGGCCACCCCGTCACTaGCACCAGAAACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRGPPRH*HQKLPP
Trigger: TGGAGGCAGTTTCTGGTGCCAGTGACGGGGTGGCCC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTCGCGGGAGTGGTGCTaGTACTCCAGGAGCCCGACG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSREWC*YSRSPT
Trigger: CGTCGGGCTCCTGGAGTACCAGCACCACTCCCGCGA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCAGATCCCGCAGGCTaGCCCGTGGCCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSDPAG*PVASRG
Trigger: ACCCCTGCTGGCCACGGGCCAGCCTGCGGGATCTGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCAGGCTCGGGCGGCTTaGCAGCCTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAQARAA*QPPPPA
Trigger: AGCTGGAGGAGGAGGCTGCCAAGCCGCCCGAGCCTG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCAGGCTCGGGCGGCTTaGCAGCCTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSQARAA*QPPPPA
Trigger: AGCTGGAGGAGGAGGCTGCCAAGCCGCCCGAGCCTG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGCACCTTGCTCTCCTTaGCCCGCCGCCGGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSAPCSP*PAAGGC
Trigger: ACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGCGGGCGGCCGACATaGACAGCCCACTGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRCGRPT*TAHCPA
Trigger: AGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGGGATCACGGCCAGCTaGCGCATCTGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRGITAS*RICFSR
Trigger: CCTGGAGAAGCAGATGCGCCAGCTGGCCGTGATCCC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGTCTGCCAGAGACCTTaGCCTTCCCGCCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRVCQRP*PSRRHP
Trigger: TGGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGAC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404621.5
3UTR CAA 72 bp TGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WMEAQADSGAPS*VGGVGSRPAPA
Trigger: TGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGCCTCATTAGCCATTaGGCGGGTGATGCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGLISH*AGDAAF
Trigger: AAAGGCCGCATCACCCGCTCAATGGCTAATGAGGCC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCTGCTGCCAGGCTGCTaGGGGGCGTCGCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHLLPGC*GASLSG
Trigger: GCCGGAGAGCGACGCCCCTCAGCAGCCTGGCAGCAG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGAGCGTAGGAGAAGGCTaGGGGGTCCGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQSVGEG*GVRGMR
Trigger: CCGCATGCCCCGGACCCCTCAGCCTTCTCCTACGCT...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGAGGGATCCCTTGTGTaGTGGACCCGCGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGREGSLV*WTRGCG
Trigger: ACCACATCCGCGGGTCCATCACACAAGGGATCCCTC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCTCGGTCAGGTCCCGTaGGGGCGGTGGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTLGQVP*GRWGRR
Trigger: CCTCCGCCCCCACCGCCCTCACGGGACCTGACCGAG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGCCGGGGCTGCCGATaGGGGAGCGTACGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWGRGCR*GSVRRA
Trigger: AGCACGACGTACGCTCCCTCATCGGCAGCCCCGGCC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCCAGCTCAGGCACAATaGCCGGGGCGCCGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWPAQAQ*PGRRAQ
Trigger: TTGCGCGCGGCGCCCCGGTCATTGTGCCTGAGCTGG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCGGGGTAGCCGCGGATaGGGTAGGGTGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRGSRG*GRVGTG
Trigger: ACCTGTACCCACCCTACCTCATCCGCGGCTACCCCG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGACCCGCAGCGTAGTTaGGTGCCAGCGAGGACTCGC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGDPQRS*VPARTR
Trigger: GCGAGTCCTCGCTGGCACTCAACTACGCTGCGGGTC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCTTGGGACAGGTCGATaGTGCCTCGGGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQLGTGR*CLGDPQ
Trigger: CTGCGGGTCCCCGAGGCATCATCGACCTGTCCCAAG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTGTGGCGGCTGCTaGAGGGCTGGGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHCCGGC*RAGARW
Trigger: CCACCGCGCCCCAGCCCTTCAGCAGCCGCCACAGCA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAGCCGGGCGAACGGGTaGGGAGGTGGAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSRANG*GGGGGP
Trigger: AGGTCCACCTCCACCTCCTCACCCGTTCGCCCGGCT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCCGGGCTGGCGTGGTaGGGTGCGAGGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSGLAW*GARFFA
Trigger: TGCGAAGAACCTCGCACCTCACCACGCCAGCCCGGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTGAGCTCACAGGGCTaGCGGGCTCCACCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVSSQG*RAPPLR
Trigger: CCGAAGGGGTGGAGCCCGTCAGCCCTGTGAGCTCAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTCTCGGTCAGCTTGCTaGAGAAGGCTGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRSRSAC*RRLAAG
Trigger: GCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCGCCACCTGGCGAGGTaGGTGTGTGGTCACTCCGTC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSARHLAR*VCGHSV
Trigger: GACGGAGTGACCACACACTCACCTCGCCAGGTGGCG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCCGCCTGCAGCCGCATaGTCAGGGGGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSPPAAA*SGGCRG
Trigger: TCCCCTACAACCCCCTGATCATGCGGCTGCAGGCGG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCCGCCTGCAGCCGCATaGTCAGGGGGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQPPAAA*SGGCRG
Trigger: TCCCCTACAACCCCCTGATCATGCGGCTGCAGGCGG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGGGGTGGGGAAGCCATaGCACCCGCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLGVGKP*HPPAAA
Trigger: TGCGGCTGCAGGCGGGTGTCATGGCTTCCCCACCCC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGCCGCTGGGGCTGGATaGTGGAGCCGGGCGACAGGT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWAAGAG*WSRATG
Trigger: ACCTGTCGCCCGGCTCCATCATCCAGCCCCAGCGGC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCAGCTCGGGCAGGTATaGGTGGGACTCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSQLGQV*VGLWPQ
Trigger: CTGCGGCCAGAGTCCCACTCATACCTGCCCGAGCTG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGCTGCTCTACCATGGTaGTCTCTCGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACAALPW*SLGPRG
Trigger: ACCGCGTGGACCGAGAGATCACCATGGTAGAGCAGC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCACCACGGGCGGGAATaGAGCCTCCTCGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVHHGRE*SLLAGR
Trigger: GCGGCCAGCGAGGAGGCTGCATTCCCGCCCGTGGTG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCACCACGGGCGGGAATaGAGCCTCCTCGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLHHGRE*SLLAGR
Trigger: GCGGCCAGCGAGGAGGCTGCATTCCCGCCCGTGGTG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCACTGGGGGCGCTGCTaGGGTCTCCTCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSHWGRC*GLLLLL
Trigger: GAGAAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGGCTGTGGTGGCCCTaGCGCTCCCGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRWLWWP*RSRPPS
Trigger: AGAAGGAGGGCGGGAGCGGCAGGGCCACCACAGCCA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTCCGGCTGCAGGTTTTaGGGTGGCGGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSGCRF*GGGGAG
Trigger: CCCAGCCCCACCGCCACCGCAAAACCTGCAGCCGGA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCAGGGGGATGTGGCTaGGATACAGGTCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRPGGCG*DTGPRH
Trigger: GTGGCGTGGACCTGTATCGCAGCCACATCCCCCTGG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGTAGTAGGCAGCGGCTaGGTCCAGAGGGATGCCGCG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGVVGSG*VQRDAA
Trigger: CGCGGCATCCCTCTGGACGCAGCCGCTGCCTACTAC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCGCAGCGTAGTTGAGTaGCAGCGAGGACTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSARSVVE*QRGLAG
Trigger: CCCCGCGAGTCCTCGCTGGCACTCAACTACGCTGCG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCGCAGCGTAGTTGAGTaGCAGCGAGGACTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQRSVVE*QRGLAG
Trigger: CCCCGCGAGTCCTCGCTGGCACTCAACTACGCTGCG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCGCAGCGTAGTTGAGTaGCAGCGAGGACTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSRSVVE*QRGLAG
Trigger: CCCCGCGAGTCCTCGCTGGCACTCAACTACGCTGCG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCTCCAGATGGGTGCGTaGTCCACCGTCGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTLQMGA*STVVVD
Trigger: GTCCACCACGACGGTGGAGCACGCACCCATCTGGAG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCACCCCCGCCGCTGCTaGCGCTGCTCTGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPHPRRC*RCSALY
Trigger: GTACAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTTCACGGGGCCTGGCTaGTTGGGCCGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVFTGPG*LGRSSP
Trigger: GGGGGAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RAVAWAPRPRRGGGQRGAQSPSE*TEETEG
Trigger: ACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTG...GGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGAATGGCGTGGAACCTaGGGACGAGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTEWRGT*GRGPVL
Trigger: GAGGACAGGCCCTCGTCCGCAGGTTCCACGCCATTC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGCAGTGGCGTGGAGGTaGGTGGTCATCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACAVAWR*VVILLW
Trigger: CCAAAGCAGGATGACCACGCACCTCCACGCCACTGC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGGTCGGCGGGGAGCTaGTCCCAGGCCCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRGSAGS*SQAPIS
Trigger: GCTTATTGGGGCCTGGGAGCAGCTCCCCGCCGACCC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAGCCCGACGTCCGTGTaGGTCCGGGCGATCTGCACT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSPTSV*VRAICT
Trigger: AGTGCAGATCGCCCGGACGCACACGGACGTCGGGCT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCACACCGGTTCCAGCTTaGCCGTCAGGCTACGGTCCT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRTPVPA*PSGYGP
Trigger: AGGACCGTAGCCTGACGGGCAAGCTGGAACCGGTGT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTATCTCTGACACCTCGTaGTCGCTGCGGGCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAISDTS*SLRAAD
Trigger: GTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGAT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCATCTCTGACACCTCGTaGTCGCTGCGGGCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGISDTS*SLRAAD
Trigger: GTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGAT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTGTTGTTGCTGCTGCTaGCTCTTGCCGCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTCCCCC*LLPRRR
Trigger: TCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGCTGCTGCGGGGCATaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGCCGA*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCACTGCGACACAGTCTTaGAGCCCACCATCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACTATQS*SPPSGR
Trigger: TCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGT...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCATGCAGCCTCCTCGCTaGCCGCCGCCGGCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPMQPPR*PPPALS
Trigger: AGAAAGCGCCGGCGGCGGCCAGCGAGGAGGCTGCAT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTCTGCCCTGTGTCCTTaGCGGCCTCAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRSALCP*RPQCEE
Trigger: CTCCTCACACTGAGGCCGCCAAGGACACAGGGCAGA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTCTGCCCTGTGTCCTTaGCGGCCTCAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACSALCP*RPQCEE
Trigger: CTCCTCACACTGAGGCCGCCAAGGACACAGGGCAGA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGGCGCCCAGGGTGGCTaGGGGCTTGGGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLGAQGG*GLGPIL
Trigger: CAGAATGGGCCCAAGCCCCCAGCCACCCTGGGCGCC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCGTCGGCGCCCAGGGTaGCTGGGGGCTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHRRRPG*LGAWAH
Trigger: ATGGGCCCAAGCCCCCAGCCACCCTGGGCGCCGACG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCGGGATGTCCTCCGGTaGTGGGGTGGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWRDVLR*WGGWPW
Trigger: CCAGGGCCACCCACCCCACCACCGGAGGACATCCCG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCTCCCCCTCCTCCACTaGGGGCGCTGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWLPLLH*GRCCGL
Trigger: GAGACCGCAGCAGCGCCCCCAGTGGAGGAGGGGGAG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGAGCTCTTGGCTGTGGTaGCCCTGCCGCTCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQSSWLW*PCRSRP
Trigger: AGGGCGGGAGCGGCAGGGCCACCACAGCCAAGAGCT...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTGGAGTCGCTGTCCTaGGGGGCGCCCGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRLESLS*GAPELL
Trigger: CAAGAGCTCGGGCGCCCCCCAGGACAGCGACTCCAG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTCTGGGGTGAGGCATTaGCCCGGGGGTCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQSGVRH*PGGRQS
Trigger: CGACTGGCGACCCCCGGGCCAATGCCTCACCCCAGA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTCTGGGGTGAGGCATTaGCCCGGGGGTCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSGVRH*PGGRQS
Trigger: CGACTGGCGACCCCCGGGCCAATGCCTCACCCCAGA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCAGGTCCAGTGGCTTCTaGGGTGAGGCATTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRRSSGF*GEALAR
Trigger: CCGGGCCAATGCCTCACCCCAGAAGCCACTGGACCT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGTTGGAGATGGTGGGTaGGCGCGGCAGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVVGDGG*ARQDGP
Trigger: CGGCCCGTCCTGCCGCGCCCACCCACCATCTCCAAC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGCGGGTTGGAGATGGTaGGTGGGCGCGGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWAGWRW*VGAAGR
Trigger: CCGTCCTGCCGCGCCCACCCACCATCTCCAACCCGC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTGTCATAGGTGCGCTTaGGGGCGGCCGTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTCHRCA*GRPSHG
Trigger: CCCATGAGACGGCCGCCCCCAAGCGCACCTATGACA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCCGCTTTAGGAGCTTaGCCTCCCGACGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPALGA*PPDAGS
Trigger: ACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGCCACCAGGCCCTCATaGGCCGGCTTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQATRPS*AGFSFR
Trigger: CCTGAAGCTGAAGCCGGCCCATGAGGGCCTGGTGGC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGAACCTCGTGGGAGGTaGCCGGCAAAGGGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLREPRGR*PAKGAP
Trigger: CGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCGTGGGCTCCCGCGTaGTCACGGGCGAACCTCGTG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLAWAPA*SRANLV
Trigger: CACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGAGATGGGGTGTGGGTaGTGCTCGGGCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAEMGCG*CSGTVL
Trigger: CAGCACCGTGCCCGAGCACCACCCACACCCCATCTC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGATGCCGCGGGGTATaGAGGTGGGGTCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQGCRGV*RWGRRP
Trigger: TGGCCTTCGACCCCACCTCCATACCCCGCGGCATCC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGATGCCGCGGGGTATaGAGGTGGGGTCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGCRGV*RWGRRP
Trigger: TGGCCTTCGACCCCACCTCCATACCCCGCGGCATCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGCGGTGGCCGCGTTGTaGTGCATCTGCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGAVAAL*CICCEV
Trigger: CACCTCGCAGCAGATGCACCACAACGCGGCCACCGC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGCTGGGCCATGGCGGTaGCCGCGTTGTGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGAGPWR*PRCGAS
Trigger: AGATGCACCACAACGCGGCCACCGCCATGGCCCAGC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGCTGGGCCATGGCGGTaGCCGCGTTGTGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQAGPWR*PRCGAS
Trigger: AGATGCACCACAACGCGGCCACCGCCATGGCCCAGC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGTCCATGGCGGTGGCTaGGGTGCCTGGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWVHGGG*GAWCRG
Trigger: CCCCCGACACCAGGCACCCCAGCCACCGCCATGGAC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGGCGGTCCATGGCGGTaGCTGGGGTGCCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLGGPWR*LGCLVS
Trigger: CGACACCAGGCACCCCAGCCACCGCCATGGACCGCC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGAGGCAAGGCGGTCCATaGCGGTGGCTGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRRQGGP*RWLGCL
Trigger: CAGGCACCCCAGCCACCGCCATGGACCGCCTTGCCT...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAGGCAAGGCGGTCCATaGCGGTGGCTGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPRQGGP*RWLGCL
Trigger: CAGGCACCCCAGCCACCGCCATGGACCGCCTTGCCT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGTGTGTTGGACCTCCTaGGGAGAGTGGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRVCWTS*GEWGAA
Trigger: AGCAGCTCCCCACTCTCCCCAGGAGGTCCAACACAC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTACCAGGTCTCCAGATaGGTGCGTGCTCCACCGTCG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRYQVSR*VRAPPS
Trigger: CGACGGTGGAGCACGCACCCATCTGGAGACCTGGTA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGAGTGCTGGTGGGCATaGGAGTGGGAGGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWECWWA*EWEAGR
Trigger: CCGCCCCGCCTCCCACTCCCATGCCCACCAGCACTC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTGCTGGAGGGCATCCTaGGTCCGAGGGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQCWRAS*VRGEMG
Trigger: GCCCATCTCCCCTCGGACCCAGGATGCCCTCCAGCA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTGGACCTCAGGACCGTaGGCGTGCTGGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQWTSGP*ACWAPQ
Trigger: CTGTGGAGCCCAGCACGCCCACGGTCCTGAGGTCCA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGTGAGGAGGTGGAGGTaGACCTCAGGACCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGVRRWR*TSGPWA
Trigger: CGCCCACGGTCCTGAGGTCCACCTCCACCTCCTCAC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTGGCAGGTGGGAATGTaGCAGCCGGGCGAACGGGTG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGWQVGM*QPGERV
Trigger: CACCCGTTCGCCCGGCTGCCACATTCCCACCTGCCA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTGGCAGGTGGGAATGTaGCAGCCGGGCGAACGGGTG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSWQVGM*QPGERV
Trigger: CACCCGTTCGCCCGGCTGCCACATTCCCACCTGCCA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGCAGTGGGTGGCAGGTaGGAATGTGGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPAVGGR*ECGSRA
Trigger: CGCCCGGCTGCCACATTCCCACCTGCCACCCACTGC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTTGGCGAGGAAGGCATaGCCGGTGTCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSALARKA*PVSARG
Trigger: GCCCCGAGCAGACACCGGCCATGCCTTCCTCGCCAA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGCTCCGAGCCCTTGCTaGGGGAGGAGGCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWAPSPC*GRRRAP
Trigger: TGGAGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCGGGCGATGGTGGCGTaGCCAGAGACAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRAMVA*PETGGT
Trigger: AGTGCCTCCTGTCTCTGGCCACGCCACCATCGCCCG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGTGCGGGCGATGGTaGCGTGGCCAGAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGCGRW*RGQRQE
Trigger: CTCCTGTCTCTGGCCACGCCACCATCGCCCGCACCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCTGGAGCAGCGGGCTaGACGAGGGCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSGAAG*TRAGSQ
Trigger: CTGAGAGCCAGCCCTCGTCCAGCCCGCTGCTCCAGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCACCCCTGGGGCGGTCTaGAGCAGCGGGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVTPGAV*SSGLDE
Trigger: CTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGTGACCTTTGACCCCTaGGGCGGTCTGGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGVTFDP*GGLEQR
Trigger: CCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCAC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGAGGTAGAGGTCACTaGGTGGGCGGCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGGRGH*VGGGGP
Trigger: TGGACCTCCGCCGCCCACCCAGTGACCTCTACCTCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGACTCCGGGAGTGCCCTaGCTCCGTCATGCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRTPGVP*LRHALR
Trigger: CCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGT...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCTCCAGCCCCATGTTaGTGCTGGCATGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPPAPC*CWHVPA
Trigger: TGCAGGAACATGCCAGCACCAACATGGGGCTGGAGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGGCGAGGTGAGTGTGTaGTCACTCCGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACGEVSV*SLRPSA
Trigger: TGCTGACGGACGGAGTGACCACACACTCACCTCGCC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCTTCCCGCCGCCACCTaGCGAGGTGAGTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQLPAAT*RGECVV
Trigger: GACCACACACTCACCTCGCCAGGTGGCGGCGGGAAG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTCTGCCAGAGACCTTaGCCTTCCCGCCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVCQRP*PSRRHL
Trigger: CAGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCTGGCTTTTCGGCTGCTaGGTCTGCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RAVAWAPRPRRGGGQRGAWLFGC*VCQRPW
Trigger: CCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCA...GGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTGTAGGGGAATGGCGTaGAACCTGCGGACGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRCRGMA*NLRTRA
Trigger: GGCCCTCGTCCGCAGGTTCCACGCCATTCCCCTACA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGAGGCCCGGTGGGGGTaGGGAAGCCATGACACCCGC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWEARWG*GSHDTR
Trigger: GCGGGTGTCATGGCTTCCCCACCCCCACCGGGCCTC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGAGGCCCGGTGGGGGTaGGGAAGCCATGACACCCGC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLEARWG*GSHDTR
Trigger: GCGGGTGTCATGGCTTCCCCACCCCCACCGGGCCTC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGAGGCCCGGTGGGGGTaGGGAAGCCATGACACCCGC +
Preference number: 4 (lower is better)
Translates to: CLVLRAEQWLGLLVPGVVEARWG*GSHDTR
Trigger: GCGGGTGTCATGGCTTCCCCACCCCCACCGGGCCTC...CACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCTCGTCCCAGGCGTaGTGGGGGCCAGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHSSSQA*WGPARG
Trigger: GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTLWTDR*MEAQAD
Trigger: GTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGTGGTCATCCTGCTTTaGGTCCCTGGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQVVILL*VPGRPG
Trigger: GCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCAC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGGGAGGCAGTGGCGTaGAGGTGCGTGGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGEAVA*RCVVIL
Trigger: CAGGATGACCACGCACCTCCACGCCACTGCCTCCCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCCCCCAGGCCGCACCTaGCCCTTTTGTCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWPPGRT*PFCPPT
Trigger: GGTGGGCGGACAAAAGGGCCAGGTGCGGCCTGGGGG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGTGGATCCCGACATaGTGGTGGGGGTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQVWIPT*WWGSAG
Trigger: CCCCGCCGACCCCCACCACCATGTCGGGATCCACAC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGTAGCGGGGCTCAGTaGCCCTCCACGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGSGAQ*PSTSVP
Trigger: TGGCACAGACGTGGAGGGCCACTGAGCCCCGCTACC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCCGCAGGCTGGCCCGTaGCCAGCAGGGGTGACGGTC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARPQAGP*PAGVTV
Trigger: GACCGTCACCCCTGCTGGCCACGGGCCAGCCTGCGG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCTCCTTGGACAGCCGTaGCGGCACCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGLLGQP*RHQLQL
Trigger: GAGCTGGAGCTGGTGCCGCCACGGCTGTCCAAGGAG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCAGGCTCGGGCGGCTTaGCAGCCTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPQARAA*QPPPPA
Trigger: AGCTGGAGGAGGAGGCTGCCAAGCCGCCCGAGCCTG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGTGCTTCGACTCGATaGGCGGCGGTGACACGGGCT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGASTR*AAVTRA
Trigger: AGCCCGTGTCACCGCCGCCCATCGAGTCGAAGCACC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCGGGTGTCGGAGGGCTaGTTGTACAGCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSRVSEG*LYSGSS
Trigger: GGAGCTGCCGCTGTACAACCAGCCCTCCGACACCCG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGCGGGCGGCCGACATaGACAGCCCACTGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVCGRPT*TAHCPA
Trigger: AGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CAA 72 bp TCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SESVSYCEQSSG*GSSSQAWWGPA
Trigger: CGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGGCCTCATTAGCCATTaGGCGGGTGATGCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRGLISH*AGDAAF
Trigger: AAAGGCCGCATCACCCGCTCAATGGCTAATGAGGCC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCGTGCACTCGCTCTTaGCGGGCTCCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPCTRS*RAPRPS
Trigger: GGAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTCCTTCTTCTCTGCCTTaGGCGCCCCCTCGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLPSSLP*APPRPW
Trigger: CCACGGCCGAGGGGGCGCTCAAGGCAGAGAAGAAGG...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCTTGGCATGCTCTaGGTACGGGACGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQGLGML*VRDVEL
Trigger: CAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTCTTGCCTTCGTAGATaGCGTGGCCCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSCLRR*RGPWAG
Trigger: GCCTGCCCAAGGGCCACGTCATCTACGAAGGCAAGA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTCTTGCCTTCGTAGATaGCGTGGCCCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRSCLRR*RGPWAG
Trigger: GCCTGCCCAAGGGCCACGTCATCTACGAAGGCAAGA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACTCGGTCAGGTCCCGTaGGGGCGGTGGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGLGQVP*GRWGRR
Trigger: CCTCCGCCCCCACCGCCCTCACGGGACCTGACCGAG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGCCGGGGCTGCCGATaGGGGAGCGTACGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGRGCR*GSVRRA
Trigger: AGCACGACGTACGCTCCCTCATCGGCAGCCCCGGCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGACCCGCAGCGTAGTTaGGTGCCAGCGAGGACTCGC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRDPQRS*VPARTR
Trigger: GCGAGTCCTCGCTGGCACTCAACTACGCTGCGGGTC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGACCCGCAGCGTAGTTaGGTGCCAGCGAGGACTCGC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQDPQRS*VPARTR
Trigger: GCGAGTCCTCGCTGGCACTCAACTACGCTGCGGGTC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTTGGGACAGGTCGATaGTGCCTCGGGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRLGTGR*CLGDPQ
Trigger: CTGCGGGTCCCCGAGGCATCATCGACCTGTCCCAAG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGGGTCAGACTGGGTaGGCTCACAGGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQVGQTG*AHRADG
Trigger: CCCGTCAGCCCTGTGAGCTCACCCAGTCTGACCCAC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCCGCTGGTGACCTTTaGCCCCTGGGGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPAGDL*PLGRSG
Trigger: TCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCTCGGTCAGCTTGCTaGAGAAGGCTGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSRSAC*RRLAAG
Trigger: GCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTCCGCCCACCTGGCCTaGCTTGGTTTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRSAHLA*LGFQQS
Trigger: AGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGCTACGGTCCTTGGTaGGGTCTTCAGATCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGYGPW*GLQIPQ
Trigger: CTGCGGGATCTGAAGACCTCACCAAGGACCGTAGCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGGTTCTCGTCGTAGATaGTCTGCACCAGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACGSRRR*SAPGCG
Trigger: ACCGCAGCCTGGTGCAGATCATCTACGACGAGAACC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGGTTCTCGTCGTAGATaGTCTGCACCAGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRGSRRR*SAPGCG
Trigger: ACCGCAGCCTGGTGCAGATCATCTACGACGAGAACC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGTCTCCCAGGCCTCCATaGGCTGGTCATAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGSPRPP*AGHSAG
Trigger: GCCAGCGCTATGACCAGCTCATGGAGGCCTGGGAGA...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCTCCCAGGCCTCCATaGGCTGGTCATAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSPRPP*AGHSAG
Trigger: GCCAGCGCTATGACCAGCTCATGGAGGCCTGGGAGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCTGAGAGGCCATCGATaGTCTCTGACACCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPLRGHR*SLTPRA
Trigger: AGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCACCACGGGCGGGAATaGAGCCTCCTCGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALHHGRE*SLLAGR
Trigger: GCGGCCAGCGAGGAGGCTGCATTCCCGCCCGTGGTG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCACTGGGGGCGCTGCTaGGGTCTCCTCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPHWGRC*GLLLLL
Trigger: GAGAAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGCCCTCCTTCTTCTCTaGCTTGAGCGCCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPALLLL*LERPLG
Trigger: GCCGAGGGGGCGCTCAAGGCAGAGAAGAAGGAGGGC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCATGGCAGCCGCTCGCTaGTTCAGCTGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRMAAAR*FSCFRS
Trigger: GGACCTGAAGCAGCTGAAGCAGCGAGCGGCTGCCAT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCTTCTGGGCCTCGGCTaGGAAGGCTGGGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTLLGLG*EGWEEH
Trigger: GTGTTCTTCCCAGCCTTCGCAGCCGAGGCCCAGAAG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACEMAPI*LSRTLG
Trigger: CCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGREMAPI*LSRTLG
Trigger: CCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGGGACAGCTGCTCCTaGTTCACTCCGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGDSCS*FTPLKG
Trigger: ACCCTTCAGCGGAGTGAAGCAGGAGCAGCTGTCCCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGGGACAGCTGCTCCTaGTTCACTCCGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGDSCS*FTPLKG
Trigger: ACCCTTCAGCGGAGTGAAGCAGGAGCAGCTGTCCCC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCCCCGTGGGGACAGCTaGTCCTGCTTCACTCCGCTG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPPRGDS*SCFTPL
Trigger: CAGCGGAGTGAAGCAGGAGCAGCTGTCCCCACGGGG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCCGCGGATGTGGTGCTaGTCTTTGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQPRMWC*SLRWWG
Trigger: CCCCCACCACCTCAAAGAGCAGCACCACATCCGCGG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGATCACATCCAGCGGGTaGACGGGTGGGAACGTCCGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQITSSG*TGGNVR
Trigger: CCGGACGTTCCCACCCGTGCACCCGCTGGATGTGAT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGTGCTCGGGCACGGTaGTGTGCGGGGACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWGARAR*CAGTWR
Trigger: TCGCCAAGTCCCCGCACAGCACCGTGCCCGAGCACC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCAGGGGGATGTGGCTaGGATACAGGTCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPGGCG*DTGPRH
Trigger: GTGGCGTGGACCTGTATCGCAGCCACATCCCCCTGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGTGGCCGCGTTGTGGTaGATCTGCTGCGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRVAALW*ICCEVM
Trigger: CATCACCTCGCAGCAGATGCACCACAACGCGGCCAC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGAGGTCTCCAGATGGGTaGGTGCTCCACCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTRSPDG*VLHRRG
Trigger: ACCACGACGGTGGAGCACGCACCCATCTGGAGACCT...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCACCCCCGCCGCTGCTaGCGCTGCTCTGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLHPRRC*RCSALY
Trigger: GTACAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCATGGCCGGTGTCTaGTCGGGGCCGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTGMAGV*SGPLWP
Trigger: CGGCCAGAGCGGCCCCGAGCAGACACCGGCCATGCC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGCTGGCGTGGTGAGGTaGGAGGTTCTTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSAGVVR*EVLRRG
Trigger: ACCCCTGCGAAGAACCTCGCACCTCACCACGCCAGC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGCTGGCGTGGTGAGGTaGGAGGTTCTTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQAGVVR*EVLRRG
Trigger: ACCCCTGCGAAGAACCTCGCACCTCACCACGCCAGC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCTTCGGGGCTGTAGCTaGTGCCGTGGTAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRLRGCS*CRGNPE
Trigger: CTCTGGGTTACCACGGCAGCAGCTACAGCCCCGAAG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTTCACGGGGCCTGGCTaGTTGGGCCGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALFTGPG*LGRSSP
Trigger: GGGGGAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCATGACCTCACTGATGTaGTGGGCCAGGGTGACCACC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRMTSLM*WARVTT
Trigger: GGTGGTCACCCTGGCCCAGCACATCAGTGAGGTCAT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGCGGCTGGCTGGTGTTaGCTGGAGACTTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGAAGWC*LETWSP
Trigger: TGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACQSPSE*TEETEG
Trigger: ACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRQSPSE*TEETEG
Trigger: ACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGCCATGACACCCGCCTaGAGCCGCATGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPAMTPA*SRMIRG
Trigger: CCCCCTGATCATGCGGCTGCAGGCGGGTGTCATGGC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCCATGACACCCGCCTaGAGCCGCATGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQAMTPA*SRMIRG
Trigger: CCCCCTGATCATGCGGCTGCAGGCGGGTGTCATGGC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGTGCGTGGTCATCCTaGTTTGGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGAWSS*FGSLAA
Trigger: GGCGGCCAGGGACCCAAAGCAGGATGACCACGCACC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCACTGGCACCAGAAACTaGCTCCAGCGAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRTGTRN*LQRGCV
Trigger: GACACAGCCTCGCTGGAGGCAGTTTCTGGTGCCAGT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGCCCTCCACGTCTGTaGCACAGGCTGTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGPPRL*HRLCGS
Trigger: GGATCCACACAGCCTGTGGCACAGACGTGGAGGGCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCACCAGGCTGCGGTaGTTCGACTCGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPCTRLR*FDSMGG
Trigger: GCCGCCCATCGAGTCGAAGCACCGCAGCCTGGTGCA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAGTACTCGCGCACCTTaGTCTCCTTGGCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSTRAP*SPWPAA
Trigger: GGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCTCTGCATGCGCTCCTaGAGCTCGCGCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQLCMRS*SSRCLR
Trigger: CCGCAAGCAGCGCGAGCTGCAGGAGCGCATGCAGAG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGTGGCGTGGAACCTGGTaGCCACCTGCGGACGAGGGC +
Preference number: 4 (lower is better)
Translates to: CLVLRAEQWLGLLVPGVVWRGTW*PPADEG
Trigger: GCCCTCGTCCGCAGGTGGGCACCAGGTTCCACGCCA...CACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTCATCTTTCTCCTCCTaGCTGCTGCGGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRSSFSS*LLRGMG
Trigger: GCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWPPSGR*PTSCGR
Trigger: ACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPPSGR*PTSCGR
Trigger: ACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCATGCAGCCTCCTCGCTaGCCGCCGCCGGCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVMQPPR*PPPALS
Trigger: AGAAAGCGCCGGCGGCGGCCAGCGAGGAGGCTGCAT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCACTGCATTCCCCTCTaGGCACCTCATTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACHCIPL*APHSQR
Trigger: CCTCTGGGAATGAGGTGCCCAGAGGGGAATGCAGTG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCGGGATGTCCTCCGGTaGTGGGGTGGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHRDVLR*WGGWPW
Trigger: CCAGGGCCACCCACCCCACCACCGGAGGACATCCCG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCGGGATGTCCTCCGGTaGTGGGGTGGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARRDVLR*WGGWPW
Trigger: CCAGGGCCACCCACCCCACCACCGGAGGACATCCCG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCCGCGTCCTTGCCCTTaGCCGGCCCCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHPRPCP*PAPPRL
Trigger: AAGCCGAGGAGGGGCCGGCCAAGGGCAAGGACGCGG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCAGCTCTTGGCTGTGGTaGCCCTGCCGCTCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVSSWLW*PCRSRP
Trigger: AGGGCGGGAGCGGCAGGGCCACCACAGCCAAGAGCT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGGGAGCTGGCTTGGTaGGAGCTGCGTCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALGELAW*ELRPPG
Trigger: CCCGGGAGGACGCAGCTCCCACCAAGCCAGCTCCCC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCTCGGCTGCGAAGGCTaGGAAGAACACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRLGCEG*EEHRLL
Trigger: GAGAAGCCTGTGTTCTTCCCAGCCTTCGCAGCCGAG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGTTGGAGATGGTGGGTaGGCGCGGCAGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHVGDGG*ARQDGP
Trigger: CGGCCCGTCCTGCCGCGCCCACCCACCATCTCCAAC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCGGGTTGGAGATGGTaGGTGGGCGCGGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHAGWRW*VGAAGR
Trigger: CCGTCCTGCCGCGCCCACCCACCATCTCCAACCCGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGAGGCGGGTTGGAGATaGTGGGTGGGCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWEAGWR*WVGAAG
Trigger: TCCTGCCGCGCCCACCCACCATCTCCAACCCGCCTC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTCCCAGCCTGGCCCCGTaGGGACAGCTGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLPSLAP*GQLLLL
Trigger: AAGCAGGAGCAGCTGTCCCCACGGGGCCAGGCTGGG...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCAGCTGGCGTGCCGTaGGTGATGGAGCCGCGGTAT +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSAGVP*VMEPRY
Trigger: ATACCGCGGCTCCATCACCCACGGCACGCCAGCTGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTGCTGGCTGAGGAGATaGCTCTGCCCACGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQCWLRR*LCPRGP
Trigger: AGGGCCGCGTGGGCAGAGCCATCTCCTCAGCCAGCA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGCGGGATCTCATGGATaGAGCGGCCCGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSAGSHG*SGPPPS
Trigger: TGAAGGAGGCGGGCCGCTCCATCCATGAGATCCCGC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTCGCGCGGGATCTCATaGATGGAGCGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLSRGIS*MERPAS
Trigger: GGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCTGCTGGCGGTCCCTaGCCGGCTCTTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLAAGGP*PALQAL
Trigger: GAGAGCCTGAAGAGCCGGCCAGGGACCGCCAGCAGC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGCTGCTGGCGGTCCCTaGCCGGCTCTTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVAAGGP*PALQAL
Trigger: GAGAGCCTGAAGAGCCGGCCAGGGACCGCCAGCAGC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCACGGGCGAACCTCGTaGGAGGTGGCCGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLHGRTS*EVAGKG
Trigger: CCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGCGGTGGCCGCGTTGTaGTGCATCTGCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPAVAAL*CICCEV
Trigger: CACCTCGCAGCAGATGCACCACAACGCGGCCACCGC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCTGGGCCATGGCGGTaGCCGCGTTGTGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRAGPWR*PRCGAS
Trigger: AGATGCACCACAACGCGGCCACCGCCATGGCCCAGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCAGCTCGCTGGGCCATaGCGGTGGCCGCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWQLAGP*RWPRCG
Trigger: ACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGGTGGCTGGGGTGCCTaGTGTCGGGGGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARGGWGA*CRGHEH
Trigger: GTGCTCGTGCCCCCGACACCAGGCACCCCAGCCACC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGCGGTCCATGGCGGTaGCTGGGGTGCCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALGGPWR*LGCLVS
Trigger: CGACACCAGGCACCCCAGCCACCGCCATGGACCGCC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGTGTGTTGGACCTCCTaGGGAGAGTGGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTVCWTS*GEWGAA
Trigger: AGCAGCTCCCCACTCTCCCCAGGAGGTCCAACACAC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGTCCGAGGGGAGATaGGCGAGTGCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGSEGR*ASAGGH
Trigger: ATGCCCACCAGCACTCGCCCATCTCCCCTCGGACCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGACACTGGGTCTCTGCTaGAGGGCATCCTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTTLGLC*RASWVR
Trigger: TCGGACCCAGGATGCCCTCCAGCAGAGACCCAGTGT...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGTGAGGAGGTGGAGGTaGACCTCAGGACCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRVRRWR*TSGPWA
Trigger: CGCCCACGGTCCTGAGGTCCACCTCCACCTCCTCAC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTGGCAGGTGGGAATGTaGCAGCCGGGCGAACGGGTG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQWQVGM*QPGERV
Trigger: CACCCGTTCGCCCGGCTGCCACATTCCCACCTGCCA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCCAGTGGGCAGTGGGTaGCAGGTGGGAATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGPVGSG*QVGMWQ
Trigger: CTGCCACATTCCCACCTGCCACCCACTGCCCACTGG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTTGGCGAGGAAGGCATaGCCGGTGTCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPLARKA*PVSARG
Trigger: GCCCCGAGCAGACACCGGCCATGCCTTCCTCGCCAA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGGGTGCGGGCGATGGTaGCGTGGCCAGAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWGCGRW*RGQRQE
Trigger: CTCCTGTCTCTGGCCACGCCACCATCGCCCGCACCC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGGAGCCCCTTGTCGTaGGTCAGACTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGSPLS*VRLGEL
Trigger: GAGCTCACCCAGTCTGACCCACGACAAGGGGCTCCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGAAGCTTCACGGGGCCTaGCTGCTTGGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQKLHGA*LLGPQL
Trigger: GAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAAGCTT...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGCTGGACGAGGGCTaGCTCTCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTGLDEG*LSGSGR
Trigger: GCGGCCGCTGCCTGAGAGCCAGCCCTCGTCCAGCCC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTCTGGAGCAGCGGGCTaGACGAGGGCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQSGAAG*TRAGSQ
Trigger: CTGAGAGCCAGCCCTCGTCCAGCCCGCTGCTCCAGA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTCTGGAGCAGCGGGCTaGACGAGGGCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSGAAG*TRAGSQ
Trigger: CTGAGAGCCAGCCCTCGTCCAGCCCGCTGCTCCAGA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGACCCCTGGGGCGGTCTaGAGCAGCGGGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARTPGAV*SSGLDE
Trigger: CTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGT...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGTGACCTTTGACCCCTaGGGCGGTCTGGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRVTFDP*GGLEQR
Trigger: CCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCAC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCACCTCACTGATGTGCTaGGCCAGGGTGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSTSLMC*ARVTTR
Trigger: GCGGGTGGTCACCCTGGCCCAGCACATCAGTGAGGT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGACCTCACTGATGTGCTaGGCCAGGGTGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQTSLMC*ARVTTR
Trigger: GCGGGTGGTCACCCTGGCCCAGCACATCAGTGAGGT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTGCGCTGAGCTGCTGTaGGTGGTGCCGGGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSACAELL*VVPGVV
Trigger: GACTACACCCGGCACCACCCACAGCAGCTCAGCGCA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCGTCTTGTTTGGCTCTaGAGACCTCTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRLVWL*RPLAPF
Trigger: GAAGGGGGCAAGAGGTCTCCAGAGCCAAACAAGACG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRKKAGG*LVLPGD
Trigger: GTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTLAEEG*RLAGVA
Trigger: GGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCCTCCAGCCCCATGTTaGTGCTGGCATGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACPPAPC*CWHVPA
Trigger: TGCAGGAACATGCCAGCACCAACATGGGGCTGGAGG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTGGCTTTTCGGCTGCTaGGTCTGCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRWLFGC*VCQRPW
Trigger: CCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGTGTAGGGGAATGGCGTaGAACCTGCGGACGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGCRGMA*NLRTRA
Trigger: GGCCCTCGTCCGCAGGTTCCACGCCATTCCCCTACA...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAGCAGAGCAGTGGCTTaGGCTCCTCGTCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASRAVA*APRPRR
Trigger: ACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAGCAGAGCAGTGGCTTaGGCTCCTCGTCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSRAVA*APRPRR
Trigger: ACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCTGGCCGCCTGCGTGTaGCTGCCACACGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHLAACV*LPHACR
Trigger: ACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGAGCGCACTGGGGGCTaGACAGGGCCTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLERTGG*TGPASI
Trigger: GATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGAGCGCACTGGGGGCTaGACAGGGCCTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLERTGG*TGPASI
Trigger: GATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCTGGGGCAGTCTGTaGGGACCGGAACGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVGWGSL*GPERAH
Trigger: GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTTCCAGCAATCTCGTTaGCTGGGGCAGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRFQQSR*LGQSVG
Trigger: CCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGTAGCGGGGCTCAGTaGCCCTCCACGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGSGAQ*PSTSVP
Trigger: TGGCACAGACGTGGAGGGCCACTGAGCCCCGCTACC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTCGCGGGAGTGGTGCTaGTACTCCAGGAGCCCGACG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSREWC*YSRSPT
Trigger: CGTCGGGCTCCTGGAGTACCAGCACCACTCCCGCGA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGACTCTGGCCGCAGGTaGAGCTCCTGGGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGDSGRR*SSWDRS
Trigger: TGAACGGTCCCAGGAGCTCCACCTGCGGCCAGAGTC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTCAGATCCCGCAGGCTaGCCCGTGGCCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWSDPAG*PVASRG
Trigger: ACCCCTGCTGGCCACGGGCCAGCCTGCGGGATCTGA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGATCAGCTCCTCCTTaGACAGCCGTGGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGSAPP*TAVAAP
Trigger: TGGTGCCGCCACGGCTGTCCAAGGAGGAGCTGATCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCGGGTGTCGGAGGGCTaGTTGTACAGCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQRVSEG*LYSGSS
Trigger: GGAGCTGCCGCTGTACAACCAGCCCTCCGACACCCG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCAGCGTCGTACAGCATaGGCGGGATCACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGQRRTA*AGSRPA
Trigger: AGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGTGTAGGGGAATGGCGTaGAACCTGGTGCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TASRAVAWAPRPRRGGGQCRGMA*NLVPTC
Trigger: GCAGGTGGGCACCAGGTTCCACGCCATTCCCCTACA...CTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCGTCTGTCTTCTCCTTaGGGAGGTCTTCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRLSSP*GGLPCR
Trigger: ACGACAAGGAAGACCTCCTCAAGGAGAAGACAGACG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCCTTCTTCTCTGCCTTaGGCGCCCCCTCGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHPSSLP*APPRPW
Trigger: CCACGGCCGAGGGGGCGCTCAAGGCAGAGAAGAAGG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCTGCTGCCAGGCTGCTaGGGGGCGTCGCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNLLPGC*GASLSG
Trigger: GCCGGAGAGCGACGCCCCTCAGCAGCCTGGCAGCAG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGCCTTGGCATGCTCTaGGTACGGGACGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGLGML*VRDVEL
Trigger: CAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGCTTCACTCCGCTaGAGGGTGCCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRPASLR*RVPAFW
Trigger: CCAAAAAGCTGGCACCCTTCAGCGGAGTGAAGCAGG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGAGGGATCCCTTGTGTaGTGGACCCGCGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQEGSLV*WTRGCG
Trigger: ACCACATCCGCGGGTCCATCACACAAGGGATCCCTC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCGGGGTAGCCGCGGATaGGGTAGGGTGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWRGSRG*GRVGTG
Trigger: ACCTGTACCCACCCTACCTCATCCGCGGCTACCCCG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTGCTGTGGCGGCTGCTaGAGGGCTGGGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLACCGGC*RAGARW
Trigger: CCACCGCGCCCCAGCCCTTCAGCAGCCGCCACAGCA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCCGTCGTGGTGGACGTaGGGATGGACTTTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGPSWWT*GWTFPA
Trigger: AGCGGGAAAAGTCCATCCTCACGTCCACCACGACGG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGAGCCGGGCGAACGGGTaGGGAGGTGGAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARSRANG*GGGGGP
Trigger: AGGTCCACCTCCACCTCCTCACCCGTTCGCCCGGCT...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGTGGGTCAGACTGGGTaGGCTCACAGGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLVGQTG*AHRADG
Trigger: CCCGTCAGCCCTGTGAGCTCACCCAGTCTGACCCAC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCCCGCTGGTGACCTTTaGCCCCTGGGGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHPAGDL*PLGRSG
Trigger: TCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCTTGCTTCTTGGACTTaGCCATGGCGGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPLASWT*PWRSCS
Trigger: AGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCCGCCTGCAGCCGCATaGTCAGGGGGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWPPAAA*SGGCRG
Trigger: TCCCCTACAACCCCCTGATCATGCGGCTGCAGGCGG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCTGCACACGCCTCTTaGACGGTAAGCAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPAHAS*TVSRDQ
Trigger: TTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGTTCTCGTCGTAGATaGTCTGCACCAGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGSRRR*SAPGCG
Trigger: ACCGCAGCCTGGTGCAGATCATCTACGACGAGAACC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTGCTGCTGTTGTTGCTaGTGCTGGCTCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGCCCCC*CWLLPR
Trigger: CCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCGATGGCCGACCAGTTaGGGCCGTGTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRRWPTS*GRVPGD
Trigger: GTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTGTGAGGAGAGGGGATaGTCTCGGTGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACCEERG*SRCLSC
Trigger: ACAGCTCAGACACCGAGAGCATCCCCTCTCCTCACA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGCCCTCCTTCTTCTCTaGCTTGAGCGCCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVALLLL*LERPLG
Trigger: GCCGAGGGGGCGCTCAAGGCAGAGAAGAAGGAGGGC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCTTCTGGGCCTCGGCTaGGAAGGCTGGGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGLLGLG*EGWEEH
Trigger: GTGTTCTTCCCAGCCTTCGCAGCCGAGGCCCAGAAG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCGAGGACGCTGGGGTaGTTGGCAGAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSRTLG*LAEEMR
Trigger: CCTCATCTCCTCTGCCAAGCACCCCAGCGTCCTCGA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCGAGGACGCTGGGGTaGTTGGCAGAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSRTLG*LAEEMR
Trigger: CCTCATCTCCTCTGCCAAGCACCCCAGCGTCCTCGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCCCCGTGGGGACAGCTaGTCCTGCTTCACTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWPRGDS*SCFTPL
Trigger: CAGCGGAGTGAAGCAGGAGCAGCTGTCCCCACGGGG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCCATCATGTCATAGGTaGGCTTGGGGGCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAPSCHR*AWGRPS
Trigger: AGACGGCCGCCCCCAAGCGCACCTATGACATGATGG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCTGAGGAGATGGCTCTaGCCACGCGGCCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQLRRWL*PRGPPS
Trigger: TGATGGAGGGCCGCGTGGGCAGAGCCATCTCCTCAG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCCGCGGATGTGGTGCTaGTCTTTGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRPRMWC*SLRWWG
Trigger: CCCCCACCACCTCAAAGAGCAGCACCACATCCGCGG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCCGCGGATGTGGTGCTaGTCTTTGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQPRMWC*SLRWWG
Trigger: CCCCCACCACCTCAAAGAGCAGCACCACATCCGCGG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGTGGGGGCGGAGGCGTaGCCTCCCGCTTTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHVGAEA*PPALGA
Trigger: AGCTCCTAAAGCGGGAGGGCACGCCTCCGCCCCCAC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCAGGCACGTTCCAGTaGCCGGGCGTCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHAGTFQ*PGVGHH
Trigger: GTGATGGCCGACGCCCGGGCACTGGAACGTGCCTGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCCAGGGGGATGTGGCTaGGATACAGGTCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQPGGCG*DTGPRH
Trigger: GTGGCGTGGACCTGTATCGCAGCCACATCCCCCTGG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCTGCGTCCAGAGGGATaGCGCGGGGTATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLRPEG*RGVWRW
Trigger: CCACCTCCATACCCCGCGGCATCCCTCTGGACGCAG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGTAGTAGGCAGCGGCTaGGTCCAGAGGGATGCCGCG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLVVGSG*VQRDAA
Trigger: CGCGGCATCCCTCTGGACGCAGCCGCTGCCTACTAC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGTGGCCGCGTTGTGGTaGATCTGCTGCGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQVAALW*ICCEVM
Trigger: CATCACCTCGCAGCAGATGCACCACAACGCGGCCAC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGTGGCCGCGTTGTGGTaGATCTGCTGCGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAVAALW*ICCEVM
Trigger: CATCACCTCGCAGCAGATGCACCACAACGCGGCCAC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGTGGCCGCGTTGTGGTaGATCTGCTGCGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGVAALW*ICCEVM
Trigger: CATCACCTCGCAGCAGATGCACCACAACGCGGCCAC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCTCCAGATGGGTGCGTaGTCCACCGTCGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQLQMGA*STVVVD
Trigger: GTCCACCACGACGGTGGAGCACGCACCCATCTGGAG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCAGGTCTCCAGATGGGTaGGTGCTCCACCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRSPDG*VLHRRG
Trigger: ACCACGACGGTGGAGCACGCACCCATCTGGAGACCT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCACCCCCGCCGCTGCTaGCGCTGCTCTGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHHPRRC*RCSALY
Trigger: GTACAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGAGCACACTGGGTCTCTaGTGGAGGGCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGSTLGL*WRASWV
Trigger: GACCCAGGATGCCCTCCAGCAGAGACCCAGTGTGCT...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGCATGGCCGGTGTCTaGTCGGGGCCGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGMAGV*SGPLWP
Trigger: CGGCCAGAGCGGCCCCGAGCAGACACCGGCCATGCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGCATGGCCGGTGTCTaGTCGGGGCCGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGMAGV*SGPLWP
Trigger: CGGCCAGAGCGGCCCCGAGCAGACACCGGCCATGCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCTCCGAGCCCTTaGTGGGGGAGGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGAPSP*WGRRRA
Trigger: AGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGCCCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGGGCTCCGAGCCCTTaGTGGGGGAGGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGAPSP*WGRRRA
Trigger: AGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGCCCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCTGGCGTGGTGAGGTaGGAGGTTCTTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRAGVVR*EVLRRG
Trigger: ACCCCTGCGAAGAACCTCGCACCTCACCACGCCAGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCGGGGCTGTAGCTGCTaGCGTGGTAACCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRGCSC*RGNPEN
Trigger: GTTCTCTGGGTTACCACGGCAGCAGCTACAGCCCCG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCTTCGGGGCTGTAGCTaGTGCCGTGGTAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSALRGCS*CRGNPE
Trigger: CTCTGGGTTACCACGGCAGCAGCTACAGCCCCGAAG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCGAGCTCTTCCAGGTaGTTGGGGAGCCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSSSSR*LGSPLS
Trigger: CGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCGAGCTCTTCCAGGTaGTTGGGGAGCCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSSSSR*LGSPLS
Trigger: CGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARALAPS*PPVGTQ
Trigger: CTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCCAGCCCCATGTTGGTaGTGGCATGTTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGPAPCW*WHVPAP
Trigger: CGGTGCAGGAACATGCCAGCACCAACATGGGGCTGG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCACTTGGCTTTTCGGCTaGTGGGTCTGCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: LRAEQWLGLLVPGVVGASTWLFG*WVCQRP
Trigger: AGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGT...GCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCGGCGTCCGGCGGTTaGAGTCTCCCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHAASGG*SLPPSA
Trigger: TGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACLDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGGTGCGTGGTCATCCTaGTTTGGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWGAWSS*FGSLAA
Trigger: GGCGGCCAGGGACCCAAAGCAGGATGACCACGCACC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCACCGACTGTCGGCCTaGACACGCCTCTTGAACGGT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGHRLSA*TRLLNG
Trigger: ACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCGGTG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGAGAATACCACCACCCTaGGCAGATGGCGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTRIPPP*ADGGHR
Trigger: TCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCT...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCAGCCCGACGTCCGTGTaGGTCCGGGCGATCTGCACT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVSPTSV*VRAICT
Trigger: AGTGCAGATCGCCCGGACGCACACGGACGTCGGGCT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGACACCGGTTCCAGCTTaGCCGTCAGGCTACGGTCCT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGTPVPA*PSGYGP
Trigger: AGGACCGTAGCCTGACGGGCAAGCTGGAACCGGTGT...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTGCACCAGGCTGCGGTaGTTCGACTCGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLCTRLR*FDSMGG
Trigger: GCCGCCCATCGAGTCGAAGCACCGCAGCCTGGTGCA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGGGGTTGTTCTCGATaGGCTCCACCTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGGCSR*APPSSP
Trigger: GGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGCAGCTCGCGCTGCTTaGGGATCTCAGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGAARAA*GSQGTA
Trigger: AGCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTCCTGCAGCTCGCGCTaGTTGCGGATCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASCSSR*LRISGN
Trigger: GTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCAGGA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGCCCACCCTCTGCATaGGCTCCTGCAGCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGPPSA*APAARA
Trigger: AGCGCGAGCTGCAGGAGCGCATGCAGAGGGTGGGCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGACATGGACAGCCCACTaGCCCGCTGGCCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWTWTAH*PAGPPS
Trigger: AGAGGGTGGGCCAGCGGGGCAGTGGGCTGTCCATGT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTACACCTCGTGCTCGCTaGGGGCGGCCGACATGGACA +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLTPRAR*GRPTWT
Trigger: TGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGT...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGATCTCTGACACCTCGTaGTCGCTGCGGGCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWISDTS*SLRAAD
Trigger: GTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGAT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTTCTCCAGGTTCTCCTaGTCTGAGAGGCCATCGATG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPFSRFS*SERPSM
Trigger: CATCGATGGCCTCTCAGAGCAGGAGAACCTGGAGAA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCTTCTGGGCCTCGGCTaGGAAGGCCTCCTTGTCGGC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWLLGLG*EGLLVG
Trigger: GCCGACAAGGAGGCCTTCGCAGCCGAGGCCCAGAAG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405201.5
CDS-3UTR GCA 90 bp TGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGAACCTGGTGCCCACCTaGGGACGAGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CLVLRAEQWLGLLVPGVVNLVPT*GRGPVL
Trigger: GAGGACAGGCCCTCGTCCGCAGGTGGGCACCAGGTT...CACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTTGTTGCTGCTGCTaGCTCTTGCCGCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPCCCCC*LLPRRR
Trigger: TCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGGCTGCTGCGGGGCATaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARGCCGA*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGTCTTCCCTGGCTGTTaGCAGTTTTGCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRVFPGC*QFCGLW
Trigger: CCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGAC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALPPSGR*PTSCGR
Trigger: ACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTACTGCGACACAGTCTTaGAGCCCACCATCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSATATQS*SPPSGR
Trigger: TCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGGGTGGCTGGGGGCTTaGGCCCATTCTGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWGWLGA*AHSALC
Trigger: ACACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCTCCTTCTCCTCCTTaGGGACCACAGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPPSPP*GPQEEV
Trigger: CACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGGCGCCCGAGCTCTTaGCTGTGGTGGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGRPSS*LWWPCR
Trigger: GCGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGGCGCCCGAGCTCTTaGCTGTGGTGGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGRPSS*LWWPCR
Trigger: GCGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTCCCCAGGCAGCTTCTaGGCCTCGGCTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWSPGSF*ASAAKA
Trigger: AGCCTTCGCAGCCGAGGCCCAGAAGCTGCCTGGGGA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTTGGAGATGGTGGGTaGGCGCGGCAGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTVGDGG*ARQDGP
Trigger: CGGCCCGTCCTGCCGCGCCCACCCACCATCTCCAAC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCGGGTTGGAGATGGTaGGTGGGCGCGGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTAGWRW*VGAAGR
Trigger: CCGTCCTGCCGCGCCCACCCACCATCTCCAACCCGC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGAGGGTGCCAGCTTTTTaGGGTCCATGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQRVPAF*GPWAGA
Trigger: TGCCCCTGCCCATGGACCCCAAAAAGCTGGCACCCT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAGGGTGCCAGCTTTTTaGGGTCCATGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSARVPAF*GPWAGA
Trigger: TGCCCCTGCCCATGGACCCCAAAAAGCTGGCACCCT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCCCAGCCTGGCCCCGTaGGGACAGCTGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHPSLAP*GQLLLL
Trigger: AAGCAGGAGCAGCTGTCCCCACGGGGCCAGGCTGGG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAGCACGGACGCCTCCTaGGCTGTGGGCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSTDAS*AVGTPR
Trigger: CCTGGGGGTGCCCACAGCCCAGGAGGCGTCCGTGCT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTCAGCTGGCGTGCCGTaGGTGATGGAGCCGCGGTAT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSAGVP*VMEPRY
Trigger: ATACCGCGGCTCCATCACCCACGGCACGCCAGCTGA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTACAGGACGTCAGCTaGCGTGCCGTGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVQDVS*RAVGDG
Trigger: TCCATCACCCACGGCACGCCAGCTGACGTCCTGTAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGCTGGCTGAGGAGATaGCTCTGCCCACGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVCWLRR*LCPRGP
Trigger: AGGGCCGCGTGGGCAGAGCCATCTCCTCAGCCAGCA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGCTTTTTGGAGCCAGTaGTGGACGCGCCGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGAFWSQ*WTRRCR
Trigger: ACGACACCGGCGCGTCCACCACTGGCTCCAAAAAGC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGTACGTCGTGCTTTTTaGAGCCAGTGGTGGACGCGC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTVRRAF*SQWWTR
Trigger: GCGCGTCCACCACTGGCTCCAAAAAGCACGACGTAC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCTGCTGGCGGTCCCTaGCCGGCTCTTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHAAGGP*PALQAL
Trigger: GAGAGCCTGAAGAGCCGGCCAGGGACCGCCAGCAGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCACGGGCGAACCTCGTaGGAGGTGGCCGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALHGRTS*EVAGKG
Trigger: CCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCTCATAGGGCGAGATaGGGTGTGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRAHRAR*GVGGAR
Trigger: CCGAGCACCACCCACACCCCATCTCGCCCTATGAGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGAAGGCCAGGGGGATGTaGCTGCGATACAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQKARGM*LRYRST
Trigger: CGTGGACCTGTATCGCAGCCACATCCCCCTGGCCTT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGATGCCGCGGGGTATaGAGGTGGGGTCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWGCRGV*RWGRRP
Trigger: TGGCCTTCGACCCCACCTCCATACCCCGCGGCATCC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGCGGATGAGGTAGGGTaGGTACAGGTGCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAADEVG*VQVRVG
Trigger: ACCTACCCGCACCTGTACCCACCCTACCTCATCCGC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTACCAGGTCTCCAGATaGGTGCGTGCTCCACCGTCG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGYQVSR*VRAPPS
Trigger: CGACGGTGGAGCACGCACCCATCTGGAGACCTGGTA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGATGGGCGAGTGCTGGTaGGCATGGGAGTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWMGECW*AWEWEA
Trigger: CGCCTCCCACTCCCATGCCCACCAGCACTCGCCCAT...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTGCTGGAGGGCATCCTaGGTCCGAGGGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWCWRAS*VRGEMG
Trigger: GCCCATCTCCCCTCGGACCCAGGATGCCCTCCAGCA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCACACTGGGTCTCTGCTaGAGGGCATCCTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGTLGLC*RASWVR
Trigger: TCGGACCCAGGATGCCCTCCAGCAGAGACCCAGTGT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCAGTGGGTGGCAGGTaGGAATGTGGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARAVGGR*ECGSRA
Trigger: CGCCCGGCTGCCACATTCCCACCTGCCACCCACTGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCAGCCCGGAGCGGGCTaGGGGCTTGGCGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAQPGAG*GLGEEG
Trigger: GCCTTCCTCGCCAAGCCCCCAGCCCGCTCCGGGCTG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCAGCCCGGAGCGGGCTaGGGGCTTGGCGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNQPGAG*GLGEEG
Trigger: GCCTTCCTCGCCAAGCCCCCAGCCCGCTCCGGGCTG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTCGGGCGATGGTGGCGTaGCCAGAGACAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLRAMVA*PETGGT
Trigger: AGTGCCTCCTGTCTCTGGCCACGCCACCATCGCCCG...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGCGGGTCCGGGCTaGCGTGGTGAGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGPAGPG*RGEVRG
Trigger: ACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAGCTCCCCCTCCAGGTaGCTCTTGTCGAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASSPSR*LLSSSS
Trigger: GGAAGAGCTCGACAAGAGCCACCTGGAGGGGGAGCT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCAGCTCCCCCTCCAGGTaGCTCTTGTCGAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSSPSR*LLSSSS
Trigger: GGAAGAGCTCGACAAGAGCCACCTGGAGGGGGAGCT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGAAGCTTCACGGGGCCTaGCTGCTTGGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWKLHGA*LLGPQL
Trigger: GAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAAGCTT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTGACCTTTGACCCCTaGGGCGGTCTGGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVTFDP*GGLEQR
Trigger: CCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCGCTGAGCTGCTGTaGGTGGTGCCGGGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPCAELL*VVPGVV
Trigger: GACTACACCCGGCACCACCCACAGCAGCTCAGCGCA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCCAGGACGGGGCAGCTaGCCCCAGGGAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWPGRGS*PQGRSR
Trigger: TCTACTCCTTCCCTGGGGCCAGCTGCCCCGTCCTGG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGACCGACGTCTTGTTTaGCTCTGGAGACCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACDRRLV*LWRPLA
Trigger: GGCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCGTCATGCCCTCCGGTaGGGACACAGGTTCAATACC +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRRHALR*GHRFNT
Trigger: GGTATTGAACCTGTGTCCCCACCGGAGGGCATGACG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGACTCCGGGAGTGCCCTaGCTCCGTCATGCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARTPGVP*LRHALR
Trigger: CCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGT...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTGGAGCCCATCCTGCTaGGCTCCGTCTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGWSPSC*APSVPH
Trigger: ATGGGGAACAGACGGAGCCCAGCAGGATGGGCTCCA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTGGAGCCCATCCTGCTaGGCTCCGTCTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSWSPSC*APSVPH
Trigger: ATGGGGAACAGACGGAGCCCAGCAGGATGGGCTCCA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSKKAGG*LVLPGD
Trigger: GTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCCAGCCCCATGTTaGTGCTGGCATGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTPPAPC*CWHVPA
Trigger: TGCAGGAACATGCCAGCACCAACATGGGGCTGGAGG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGCGAGGTGAGTGTGTaGTCACTCCGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGEVSV*SLRPSA
Trigger: TGCTGACGGACGGAGTGACCACACACTCACCTCGCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCTTCCCGCCGCCACCTaGCGAGGTGAGTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWLPAAT*RGECVV
Trigger: GACCACACACTCACCTCGCCAGGTGGCGGCGGGAAG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGGGTTGTAGGGGAATaGCGTGGAACCTGCGGACGA +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGVVGE*RGTCGR
Trigger: TCGTCCGCAGGTTCCACGCCATTCCCCTACAACCCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCCTCGTCCCAGGCGTaGTGGGGGCCAGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSSSQA*WGPARG
Trigger: GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGAGCAGAGCAGTGGCTTaGGCTCCTCGTCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRSRAVA*APRPRR
Trigger: ACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCT...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWQGLLP*LGESAA
Trigger: GGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTGGTCATCCTGCTTTaGGTCCCTGGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVVILL*VPGRPG
Trigger: GCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGGGAGGCAGTGGCGTaGAGGTGCGTGGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVGEAVA*RCVVIL
Trigger: CAGGATGACCACGCACCTCCACGCCACTGCCTCCCC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCAGCAATCTCGTTGGCTaGGGCAGTCTGTGGGGACCG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSNLVG*GSLWGP
Trigger: CGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCACCTGGCCTGACTTaGTTTCCAGCAATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPPGLT*FPAISL
Trigger: CAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGTGCCACAGGCTGTGTaGATCCCGACATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGVPQAV*IPTWWW
Trigger: CCACCACCATGTCGGGATCCACACAGCCTGTGGCAC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCCGGGCGATCTGCACTaGGTAGGAAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQPGDLH*VGKAVG
Trigger: CCCCACAGCCTTTCCTACCCAGTGCAGATCGCCCGG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCGGGTGTCGGAGGGCTaGTTGTACAGCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLRVSEG*LYSGSS
Trigger: GGAGCTGCCGCTGTACAACCAGCCCTCCGACACCCG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTCCCCAGGCAGCTTCTaGGCCTCGGCTGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALSPGSF*ASAAKA
Trigger: GGCCTTCGCAGCCGAGGCCCAGAAGCTGCCTGGGGA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405201.5
3UTR CAA 72 bp CGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTaGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGC +
Preference number: 4 (lower is better)
Translates to: RPPGLTWFPAIS*AGAVCGDRNER
Trigger: GCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGCCTCATTAGCCATTaGGCGGGTGATGCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGLISH*AGDAAF
Trigger: AAAGGCCGCATCACCCGCTCAATGGCTAATGAGGCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGTGGGAATGCCTTTGGTaGTGCTTCCGCCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGWECLW*CFRPEL
Trigger: CAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCA...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTGGGAATGCCTTTGGTaGTGCTTCCGCCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAWECLW*CFRPEL
Trigger: CAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTGGGAATGCCTTTGGTaGTGCTTCCGCCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSWECLW*CFRPEL
Trigger: CAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCTTGCCTTCGTAGATaGCGTGGCCCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRSCLRR*RGPWAG
Trigger: GCCTGCCCAAGGGCCACGTCATCTACGAAGGCAAGA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCTCGGTCAGGTCCCGTaGGGGCGGTGGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRELGQVP*GRWGRR
Trigger: CCTCCGCCCCCACCGCCCTCACGGGACCTGACCGAG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCTCGGTCAGGTCCCGTaGGGGCGGTGGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALGQVP*GRWGRR
Trigger: CCTCCGCCCCCACCGCCCTCACGGGACCTGACCGAG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGACCCGCAGCGTAGTTaGGTGCCAGCGAGGACTCGC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALDPQRS*VPARTR
Trigger: GCGAGTCCTCGCTGGCACTCAACTACGCTGCGGGTC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCTTGGGACAGGTCGATaGTGCCTCGGGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHLGTGR*CLGDPQ
Trigger: CTGCGGGTCCCCGAGGCATCATCGACCTGTCCCAAG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCCGTCGTGGTGGACGTaGGGATGGACTTTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQPSWWT*GWTFPA
Trigger: AGCGGGAAAAGTCCATCCTCACGTCCACCACGACGG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAGCCGGGCGAACGGGTaGGGAGGTGGAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSRANG*GGGGGP
Trigger: AGGTCCACCTCCACCTCCTCACCCGTTCGCCCGGCT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGTGGGTCAGACTGGGTaGGCTCACAGGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARVGQTG*AHRADG
Trigger: CCCGTCAGCCCTGTGAGCTCACCCAGTCTGACCCAC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPTRGW*AASGGC
Trigger: GCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTCCGCCCACCTGGCCTaGCTTGGTTTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASAHLA*LGFQQS
Trigger: AGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTGTCTGAGCTGTTGTTaGCAGTGGCTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRCLSCC*QWLQPP
Trigger: AGGAGGCTGAAGCCACTGTCAACAACAGCTCAGACA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCTGCTCTACCATGGTaGTCTCTCGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRAALPW*SLGPRG
Trigger: ACCGCGTGGACCGAGAGATCACCATGGTAGAGCAGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTTCTCCCAGGCCTCCATaGGCTGGTCATAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLSPRPP*AGHSAG
Trigger: GCCAGCGCTATGACCAGCTCATGGAGGCCTGGGAGA...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCAGGTTCTCCTGCTCTaGGAGGCCATCGATGATCTC +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTQVLLL*EAIDDL
Trigger: GAGATCATCGATGGCCTCTCAGAGCAGGAGAACCTG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGCTGCTGTTGTTGCTaGTGCTGGCTCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRCCCCC*CWLLPR
Trigger: CCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCTTTCTCCTCCTGGCTaGTGCGGGGCATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWLSPPG*CGAWAA
Trigger: AGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGCTGTTGGCAGTTTTaGGGCCTTTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGCWQF*GLWRPQ
Trigger: CTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCGATGGCCGACCAGTTaGGGCCGTGTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVRWPTS*GRVPGD
Trigger: GTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCACTGGGGGCGCTGCTaGGGTCTCCTCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARHWGRC*GLLLLL
Trigger: GAGAAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTGGCTGTGGTGGCCCTaGCGCTCCCGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTWLWWP*RSRPPS
Trigger: AGAAGGAGGGCGGGAGCGGCAGGGCCACCACAGCCA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGCTCGCTGCTTCAGCTaGTTCAGGTCCAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQARCFS*FRSSGF
Trigger: GAAGCCACTGGACCTGAAGCAGCTGAAGCAGCGAGC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTCCGGCTGCAGGTTTTaGGGTGGCGGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSGCRF*GGGGAG
Trigger: CCCAGCCCCACCGCCACCGCAAAACCTGCAGCCGGA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGGGACAGCTGCTCCTaGTTCACTCCGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGDSCS*FTPLKG
Trigger: ACCCTTCAGCGGAGTGAAGCAGGAGCAGCTGTCCCC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGTCCTGAGCTGCTTCTaGCGTCCTCCTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAVLSCF*RPPWST
Trigger: AGTGCTCCAAGGAGGACGGCAGAAGCAGCTCAGGAC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGACCCGCGGATGTGGTaGTGCTCTTTGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRDPRMW*CSLRWW
Trigger: CCACCACCTCAAAGAGCAGCACCACATCCGCGGGTC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCAGGTAGTCCTCCTGTaGCTCCACGTAGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPQVVLL*LHVGPR
Trigger: CCTCGGTCCTACGTGGAGGCACAGGAGGACTACCTG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGTGGCCGGCAAAGGGTaGCCCGTGGTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWVAGKG*PVVLIG
Trigger: ACCTATGAGGACCACGGGGCACCCTTTGCCGGCCAC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGGCTCCGAGCCCTTaGTGGGGGAGGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTGAPSP*WGRRRA
Trigger: AGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGCCCC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTTCACGGGGCCTGGCTaGTTGGGCCGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNFTGPG*LGRSSP
Trigger: GGGGGAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCCAGCCCCATGTTGGTaGTGGCATGTTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPPAPCW*WHVPAP
Trigger: CGGTGCAGGAACATGCCAGCACCAACATGGGGCTGG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTTCGGCTGCTGGGTCTaGCAGAGACCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRFGCWV*QRPWPS
Trigger: GGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSQSPSE*TEETEG
Trigger: ACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGAATGGCGTGGAACCTaGGGACGAGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWEWRGT*GRGPVL
Trigger: GAGGACAGGCCCTCGTCCGCAGGTTCCACGCCATTC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGAATGGCGTGGAACCTaGGGACGAGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLEWRGT*GRGPVL
Trigger: GAGGACAGGCCCTCGTCCGCAGGTTCCACGCCATTC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTESVSY*EQSSGL
Trigger: CAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCACCGACTGTCGGCCTaGACACGCCTCTTGAACGGT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPHRLSA*TRLLNG
Trigger: ACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCGGTG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCACTGGCACCAGAAACTaGCTCCAGCGAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGTGTRN*LQRGCV
Trigger: GACACAGCCTCGCTGGAGGCAGTTTCTGGTGCCAGT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGGCCCTCCACGTCTGTaGCACAGGCTGTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLGPPRL*HRLCGS
Trigger: GGATCCACACAGCCTGTGGCACAGACGTGGAGGGCC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCTCTGCATGCGCTCCTaGAGCTCGCGCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARLCMRS*SSRCLR
Trigger: CCGCAAGCAGCGCGAGCTGCAGGAGCGCATGCAGAG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGTTGTTGCTGCTGCTaGCTCTTGCCGCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVCCCCC*LLPRRR
Trigger: TCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCATCTTTCTCCTCCTaGCTGCTGCGGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRSSFSS*LLRGMG
Trigger: GCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTCATCTTTCTCCTCCTaGCTGCTGCGGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQSSFSS*LLRGMG
Trigger: GCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCTCATTCAGCTCCATaGAGGCCAGCTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSHSAP*RPARRS
Trigger: AGAGCGCCGAGCTGGCCTCCATGGAGCTGAATGAGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTPPSGR*PTSCGR
Trigger: ACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCTGCCCTGTGTCCTTaGCGGCCTCAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRSALCP*RPQCEE
Trigger: CTCCTCACACTGAGGCCGCCAAGGACACAGGGCAGA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGCGCCCAGGGTGGCTaGGGGCTTGGGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGAQGG*GLGPIL
Trigger: CAGAATGGGCCCAAGCCCCCAGCCACCCTGGGCGCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCCTCCTTCTCCTCCTTaGGGACCACAGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRPPSPP*GPQEEV
Trigger: CACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCCTCCTTCTCCTCCTTaGGGACCACAGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPPPSPP*GPQEEV
Trigger: CACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACTCCCCCTCCTCCACTaGGGGCGCTGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGLPLLH*GRCCGL
Trigger: GAGACCGCAGCAGCGCCCCCAGTGGAGGAGGGGGAG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGCGTCCTTGCCCTTaGCCGGCCCCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGPRPCP*PAPPRL
Trigger: AAGCCGAGGAGGGGCCGGCCAAGGGCAAGGACGCGG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCTGGAGTCGCTGTCCTaGGGGGCGCCCGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTLESLS*GAPELL
Trigger: CAAGAGCTCGGGCGCCCCCCAGGACAGCGACTCCAG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGAGGTCCAGTGGCTTCTaGGGTGAGGCATTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWRSSGF*GEALAR
Trigger: CCGGGCCAATGCCTCACCCCAGAAGCCACTGGACCT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGAGCTGGCTTGGTaGGAGCTGCGTCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGELAW*ELRPPG
Trigger: CCCGGGAGGACGCAGCTCCCACCAAGCCAGCTCCCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCTCGGCTGCGAAGGCTaGGAAGAACACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGLGCEG*EEHRLL
Trigger: GAGAAGCCTGTGTTCTTCCCAGCCTTCGCAGCCGAG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCTCGGCTGCGAAGGCTaGGAAGAACACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSALGCEG*EEHRLL
Trigger: GAGAAGCCTGTGTTCTTCCCAGCCTTCGCAGCCGAG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTCCCCAGGCAGCTTCTaGGCCTCGGCTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALSPGSF*ASAAKA
Trigger: AGCCTTCGCAGCCGAGGCCCAGAAGCTGCCTGGGGA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGCCGGGCAGTGTCATaGAGGCCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGRAVS*RPRGSG
Trigger: CCCACTGCCCCTGGGCCTCCATGACACTGCCCGGCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGTTGGAGATGGTGGGTaGGCGCGGCAGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGVGDGG*ARQDGP
Trigger: CGGCCCGTCCTGCCGCGCCCACCCACCATCTCCAAC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTACGGGACGTGGAGCTaGACCGACATTCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAYGTWS*TDIPWE
Trigger: CTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACAGCACGGACGCCTCCTaGGCTGTGGGCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSTDAS*AVGTPR
Trigger: CCTGGGGGTGCCCACAGCCCAGGAGGCGTCCGTGCT...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCCTTGGAGCACTaGGTCACAGACATGCCACCC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSSLEH*VTDMPP
Trigger: GGGTGGCATGTCTGTGACCCAGTGCTCCAAGGAGGA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTCCTCCTTGGAGCACTaGGTCACAGACATGCCACCC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASSLEH*VTDMPP
Trigger: GGGTGGCATGTCTGTGACCCAGTGCTCCAAGGAGGA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTGCTGGCTGAGGAGATaGCTCTGCCCACGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARCWLRR*LCPRGP
Trigger: AGGGCCGCGTGGGCAGAGCCATCTCCTCAGCCAGCA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTGCTCTTTGAGGTGGTaGGGGCTGTGTCGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWCSLRW*GLCRSG
Trigger: GCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGCTCTTTGAGGTGGTaGGGGCTGTGTCGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVCSLRW*GLCRSG
Trigger: GCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCATGGACCCGCGGATGTaGTGCTGCTCTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGMDPRM*CCSLRW
Trigger: CCACCTCAAAGAGCAGCACCACATCCGCGGGTCCAT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCCCGCTTTAGGAGCTTaGCCTCCCGACGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPPALGA*PPDAGS
Trigger: ACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGCTTTTTGGAGCCAGTaGTGGACGCGCCGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPAFWSQ*WTRRCR
Trigger: ACGACACCGGCGCGTCCACCACTGGCTCCAAAAAGC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCTTTTTGGAGCCAGTaGTGGACGCGCCGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRAFWSQ*WTRRCR
Trigger: ACGACACCGGCGCGTCCACCACTGGCTCCAAAAAGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGTACGTCGTGCTTTTTaGAGCCAGTGGTGGACGCGC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAVRRAF*SQWWTR
Trigger: GCGCGTCCACCACTGGCTCCAAAAAGCACGACGTAC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTACGTCGTGCTTTTTaGAGCCAGTGGTGGACGCGC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVRRAF*SQWWTR
Trigger: GCGCGTCCACCACTGGCTCCAAAAAGCACGACGTAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCAGCGGGTGCACGGGTaGGAACGTCCGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHQRVHG*ERPAGA
Trigger: AGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACAGCGGGTGCACGGGTaGGAACGTCCGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTQRVHG*ERPAGA
Trigger: AGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCACGGGCGAACCTCGTaGGAGGTGGCCGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTHGRTS*EVAGKG
Trigger: CCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTGCTGTGCGGGGACTTaGCGATCTCACGAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLCCAGT*RSHEAS
Trigger: CGACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGATGCCGCGGGGTATaGAGGTGGGGTCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGCRGV*RWGRRP
Trigger: TGGCCTTCGACCCCACCTCCATACCCCGCGGCATCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCGGTGGCCGCGTTGTaGTGCATCTGCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARAVAAL*CICCEV
Trigger: CACCTCGCAGCAGATGCACCACAACGCGGCCACCGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCTGGGCCATGGCGGTaGCCGCGTTGTGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHAGPWR*PRCGAS
Trigger: AGATGCACCACAACGCGGCCACCGCCATGGCCCAGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGCAGGTGTGGCACTTaGGACAGGTCGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGRCGT*DRSMMP
Trigger: AGGCATCATCGACCTGTCCCAAGTGCCACACCTGCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGCAGGTGTGGCACTTaGGACAGGTCGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGGRCGT*DRSMMP
Trigger: AGGCATCATCGACCTGTCCCAAGTGCCACACCTGCC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGAGCACAGGCAGGTGTaGCACTTGGGACAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAEHRQV*HLGQVD
Trigger: ATCGACCTGTCCCAAGTGCCACACCTGCCTGTGCTC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGCGGTCCATGGCGGTaGCTGGGGTGCCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGGPWR*LGCLVS
Trigger: CGACACCAGGCACCCCAGCCACCGCCATGGACCGCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTGTGTTGGACCTCCTaGGGAGAGTGGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVCWTS*GEWGAA
Trigger: AGCAGCTCCCCACTCTCCCCAGGAGGTCCAACACAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRTRTW*LVLSSV
Trigger: CACACTTGACAAAACCAACCACCACGTCCTCGTCCG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACARTRT*WLVLSS
Trigger: ACTTGACAAAACCAACCACCACGTCCTCGTCCGAGC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTACCAGGTCTCCAGATaGGTGCGTGCTCCACCGTCG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRYQVSR*VRAPPS
Trigger: CGACGGTGGAGCACGCACCCATCTGGAGACCTGGTA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGAGTGCTGGTGGGCATaGGAGTGGGAGGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGECWWA*EWEAGR
Trigger: CCGCCCCGCCTCCCACTCCCATGCCCACCAGCACTC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGGGTCCGAGGGGAGATaGGCGAGTGCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARGSEGR*ASAGGH
Trigger: ATGCCCACCAGCACTCGCCCATCTCCCCTCGGACCC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTGCTGGAGGGCATCCTaGGTCCGAGGGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALCWRAS*VRGEMG
Trigger: GCCCATCTCCCCTCGGACCCAGGATGCCCTCCAGCA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGTGAGGAGGTGGAGGTaGACCTCAGGACCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALVRRWR*TSGPWA
Trigger: CGCCCACGGTCCTGAGGTCCACCTCCACCTCCTCAC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTGGCGAGGAAGGCATaGCCGGTGTCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHLARKA*PVSARG
Trigger: GCCCCGAGCAGACACCGGCCATGCCTTCCTCGCCAA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGGGAGCCCCTTGTCGTaGGTCAGACTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLGSPLS*VRLGEL
Trigger: GAGCTCACCCAGTCTGACCCACGACAAGGGGCTCCC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGAAGCTTCACGGGGCCTaGCTGCTTGGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARKLHGA*LLGPQL
Trigger: GAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAAGCTT...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGCGCTGAGCTGCTGTaGGTGGTGCCGGGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVCAELL*VVPGVV
Trigger: GACTACACCCGGCACCACCCACAGCAGCTCAGCGCA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTGCGCTGAGCTGCTGTaGGTGGTGCCGGGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLCAELL*VVPGVV
Trigger: GACTACACCCGGCACCACCCACAGCAGCTCAGCGCA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCAGGACGGGGCAGCTaGCCCCAGGGAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALPGRGS*PQGRSR
Trigger: TCTACTCCTTCCCTGGGGCCAGCTGCCCCGTCCTGG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCGTCATGCCCTCCGGTaGGGACACAGGTTCAATACC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQRHALR*GHRFNT
Trigger: GGTATTGAACCTGTGTCCCCACCGGAGGGCATGACG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTACTCCGGGAGTGCCCTaGCTCCGTCATGCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTTPGVP*LRHALR
Trigger: CCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGAGCCCATCCTGCTaGGCTCCGTCTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPWSPSC*APSVPH
Trigger: ATGGGGAACAGACGGAGCCCAGCAGGATGGGCTCCA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGTGTTGCCTGGAGACTTaGAGCCCATCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGCCLET*SPSCWA
Trigger: AGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACA...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTGTTGCCTGGAGACTTaGAGCCCATCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSACCLET*SPSCWA
Trigger: AGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCGGCTCATTCCGGTTGTaGGTGTTCAGCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPGSFRL*VFSFLL
Trigger: CAACAAGAAGCTGAACACCCACAACCGGAATGAGCC...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCCCCATGTTGGTGCTaGCATGTTCCTGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRAPCWC*HVPAPP
Trigger: AGGCGGTGCAGGAACATGCCAGCACCAACATGGGGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTTCCCGCCGCCACCTaGCGAGGTGAGTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALLPAAT*RGECVV
Trigger: GACCACACACTCACCTCGCCAGGTGGCGGCGGGAAG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCTTCCCGCCGCCACCTaGCGAGGTGAGTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARLPAAT*RGECVV
Trigger: GACCACACACTCACCTCGCCAGGTGGCGGCGGGAAG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTGTAGGGGAATGGCGTaGAACCTGCGGACGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLCRGMA*NLRTRA
Trigger: GGCCCTCGTCCGCAGGTTCCACGCCATTCCCCTACA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATCCTCGTCCCAGGCGTaGTGGGGGCCAGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSSSQA*WGPARG
Trigger: GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLRAEQ*LGLLVP
Trigger: TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALQGLLP*LGESAA
Trigger: GGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVLWTDR*MEAQAD
Trigger: GTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCTGGCCGCCTGCGTGTaGCTGCCACACGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLALAACV*LPHACR
Trigger: ACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGTGGTCATCCTGCTTTaGGTCCCTGGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHVVILL*VPGRPG
Trigger: GCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCAC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGGGAGGCAGTGGCGTaGAGGTGCGTGGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGEAVA*RCVVIL
Trigger: CAGGATGACCACGCACCTCCACGCCACTGCCTCCCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGTTCCAGCAATCTCGTTaGCTGGGGCAGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGFQQSR*LGQSVG
Trigger: CCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTTCCAGCAATCTCGTTaGCTGGGGCAGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGFQQSR*LGQSVG
Trigger: CCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCACCTGGCCTGACTTaGTTTCCAGCAATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPPGLT*FPAISL
Trigger: CAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTATCCCGACATGGTGGTaGGGGTCGGCGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTIPTWW*GSAGSC
Trigger: GCAGCTCCCCGCCGACCCCCACCACCATGTCGGGAT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCGCGGGAGTGGTGCTaGTACTCCAGGAGCCCGACG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHSREWC*YSRSPT
Trigger: CGTCGGGCTCCTGGAGTACCAGCACCACTCCCGCGA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCGCAGGTGGAGCTCCTaGGACCGTTCATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHRRWSS*DRSFPG
Trigger: GCCCGGGAATGAACGGTCCCAGGAGCTCCACCTGCG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGACTCTGGCCGCAGGTaGAGCTCCTGGGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLDSGRR*SSWDRS
Trigger: TGAACGGTCCCAGGAGCTCCACCTGCGGCCAGAGTC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACCGCAGGCTGGCCCGTaGCCAGCAGGGGTGACGGTC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTPQAGP*PAGVTV
Trigger: GACCGTCACCCCTGCTGGCCACGGGCCAGCCTGCGG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGTGCTTCGACTCGATaGGCGGCGGTGACACGGGCT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGASTR*AAVTRA
Trigger: AGCCCGTGTCACCGCCGCCCATCGAGTCGAAGCACC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGGGATCACGGCCAGCTaGCGCATCTGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLGITAS*RICFSR
Trigger: CCTGGAGAAGCAGATGCGCCAGCTGGCCGTGATCCC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCTGTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCGTCTGCCAGAGACCTTaGCCTTCCCGCCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: AVGECLVLRAEQWLGLLVVCQRP*PSRRHP
Trigger: TGGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGAC...GACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCGTCTGTCTTCTCCTTaGGGAGGTCTTCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRRLSSP*GGLPCR
Trigger: ACGACAAGGAAGACCTCCTCAAGGAGAAGACAGACG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTCGTTGTCCTCCCCTaGGGTGTCGTCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVVVLP*GVVCLL
Trigger: GAGAAGACAGACGACACCTCAGGGGAGGACAACGAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGATGCTCTCGGTGTCTaGGCTGTTGTTGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSDALGV*AVVDSG
Trigger: GCCACTGTCAACAACAGCTCAGACACCGAGAGCATC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGATGCTCTCGGTGTCTaGGCTGTTGTTGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSADALGV*AVVDSG
Trigger: GCCACTGTCAACAACAGCTCAGACACCGAGAGCATC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCCGTGCACTCGCTCTTaGCGGGCTCCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAPCTRS*RAPRPS
Trigger: GGAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCTTCTTCTCTGCCTTaGGCGCCCCCTCGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGPSSLP*APPRPW
Trigger: CCACGGCCGAGGGGGCGCTCAAGGCAGAGAAGAAGG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACAGTGGCTTCTGGGGTaGGGCATTGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGQWLLG*GIGPGV
Trigger: GACCCCCGGGCCAATGCCTCACCCCAGAAGCCACTG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCTGCTGCCAGGCTGCTaGGGGGCGTCGCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQLLPGC*GASLSG
Trigger: GCCGGAGAGCGACGCCCCTCAGCAGCCTGGCAGCAG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAAGCGTAGGAGAAGGCTaGGGGGTCCGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGSVGEG*GVRGMR
Trigger: CCGCATGCCCCGGACCCCTCAGCCTTCTCCTACGCT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCAGCTCAGGCACAATaGCCGGGGCGCCGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPAQAQ*PGRRAQ
Trigger: TTGCGCGCGGCGCCCCGGTCATTGTGCCTGAGCTGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCGGGGTAGCCGCGGATaGGGTAGGGTGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTRGSRG*GRVGTG
Trigger: ACCTGTACCCACCCTACCTCATCCGCGGCTACCCCG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTGCTGTGGCGGCTGCTaGAGGGCTGGGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDCCGGC*RAGARW
Trigger: CCACCGCGCCCCAGCCCTTCAGCAGCCGCCACAGCA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTCCGGGCTGGCGTGGTaGGGTGCGAGGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSGLAW*GARFFA
Trigger: TGCGAAGAACCTCGCACCTCACCACGCCAGCCCGGA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTCTCGGTCAGCTTGCTaGAGAAGGCTGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARSRSAC*RRLAAG
Trigger: GCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAPTRGW*AASGGC
Trigger: GCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQPTRGW*AASGGC
Trigger: GCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCGCCTGCAGCCGCATaGTCAGGGGGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTPPAAA*SGGCRG
Trigger: TCCCCTACAACCCCCTGATCATGCGGCTGCAGGCGG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCTTGGTCCTGCGAGTaGTGGGGTCACCGACTGTCG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALPWSCE*WGHRLS
Trigger: CGACAGTCGGTGACCCCATCACTCGCAGGACCAAGG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGGACACAGCGGGGCGTaGGCCAGCAGTCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIGHSGA*ASSPRP
Trigger: GGGGCGGGGACTGCTGGCTCACGCCCCGCTGTGTCC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAACGACGTGTGTAAATaGCAGAATACCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPNDVCK*QNTTTL
Trigger: CAGGGTGGTGGTATTCTGTCATTTACACACGTCGTT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAATGAACTCCATCTCTaGCTTCCCCAGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSNELHL*LPQLGQ
Trigger: CTGCCCGAGCTGGGGAAGTCAGAGATGGAGTTCATT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCATTTTGATGTTCTCATaGTACTGCCGGGTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPILMFS*YCRVSE
Trigger: CTCCGACACCCGGCAGTATCATGAGAACATCAAAAT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCTGAGAGGCCATCGATaGTCTCTGACACCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQLRGHR*SLTPRA
Trigger: AGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGCTGCTGCTGGCTCTTaGCGCGGCGCCGATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNAAAGS*RGADSS
Trigger: GGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTTTCTCCTCCTGGCTaGTGCGGGGCATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALLSPPG*CGAWAA
Trigger: AGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGGCTGTTGGCAGTTTTaGGGCCTTTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPGCWQF*GLWRPQ
Trigger: CTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTGTGAGGAGAGGGGATaGTCTCGGTGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGCEERG*SRCLSC
Trigger: ACAGCTCAGACACCGAGAGCATCCCCTCTCCTCACA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACCGGCCTCCGCGTCCTTaGCCTTGGCCGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDRPPRP*PWPAPP
Trigger: AGGAGGGGCCGGCCAAGGGCAAGGACGCGGAGGCCG...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTGGCTGTGGTGGCCCTaGCGCTCCCGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNWLWWP*RSRPPS
Trigger: AGAAGGAGGGCGGGAGCGGCAGGGCCACCACAGCCA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCGTCGCTCTCCGGCTaGAGGTTTTGCGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTASLSG*RFCGGG
Trigger: ACCGCCACCGCAAAACCTGCAGCCGGAGAGCGACGC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGGGGACAGCTGCTCCTaGTTCACTCCGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLGDSCS*FTPLKG
Trigger: ACCCTTCAGCGGAGTGAAGCAGGAGCAGCTGTCCCC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCCTGAGCTGCTTCTaGCGTCCTCCTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQVLSCF*RPPWST
Trigger: AGTGCTCCAAGGAGGACGGCAGAAGCAGCTCAGGAC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGACCCGCGGATGTGGTaGTGCTCTTTGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLDPRMW*CSLRWW
Trigger: CCACCACCTCAAAGAGCAGCACCACATCCGCGGGTC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGACCCGCGGATGTGGTaGTGCTCTTTGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWDPRMW*CSLRWW
Trigger: CCACCACCTCAAAGAGCAGCACCACATCCGCGGGTC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCAGGTAGTCCTCCTGTaGCTCCACGTAGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLQVVLL*LHVGPR
Trigger: CCTCGGTCCTACGTGGAGGCACAGGAGGACTACCTG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCAGGTAGTCCTCCTGTaGCTCCACGTAGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWQVVLL*LHVGPR
Trigger: CCTCGGTCCTACGTGGAGGCACAGGAGGACTACCTG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGTGGGGGCGGAGGCGTaGCCTCCCGCTTTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGVGAEA*PPALGA
Trigger: AGCTCCTAAAGCGGGAGGGCACGCCTCCGCCCCCAC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGTGGCCGGCAAAGGGTaGCCCGTGGTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALVAGKG*PVVLIG
Trigger: ACCTATGAGGACCACGGGGCACCCTTTGCCGGCCAC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGAAAGGCTGCCCTCCTaGAGGCGCGGCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTERLPS*RRGVGS
Trigger: GGAGCCCACGCCGCGCCTGCAGGAGGGCAGCCTTTC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTCGGGCACGGTGCTGTaGGGGGACTTGGCGATCTCA +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALSGTVL*GDLAIS
Trigger: TGAGATCGCCAAGTCCCCGCACAGCACCGTGCCCGA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGTGCTCGGGCACGGTaGTGTGCGGGGACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGARAR*CAGTWR
Trigger: TCGCCAAGTCCCCGCACAGCACCGTGCCCGAGCACC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCATTGATGATGGTCTaGCGGTTCTCCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRSLMMV*RFSSAA
Trigger: GGCGGCGCTGGAGAACCGGCAGACCATCATCAATGA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATGGCGGTGGCTGGGGTaGCTGGTGTCGGGGGCACGA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTWRWLG*LVSGAR
Trigger: TCGTGCCCCCGACACCAGGCACCCCAGCCACCGCCA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACCCCCACCCCCGCCGCTaGTGCCGCTGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDPHPRR*CRCSAL
Trigger: CAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTGGGG...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGAGCACACTGGGTCTCTaGTGGAGGGCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWSTLGL*WRASWV
Trigger: GACCCAGGATGCCCTCCAGCAGAGACCCAGTGTGCT...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGCATGGCCGGTGTCTaGTCGGGGCCGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGMAGV*SGPLWP
Trigger: CGGCCAGAGCGGCCCCGAGCAGACACCGGCCATGCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCGGGGCTGTAGCTGCTaGCGTGGTAACCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWRGCSC*RGNPEN
Trigger: GTTCTCTGGGTTACCACGGCAGCAGCTACAGCCCCG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCGGGGCTGTAGCTGCTaGCGTGGTAACCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWRGCSC*RGNPEN
Trigger: GTTCTCTGGGTTACCACGGCAGCAGCTACAGCCCCG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCTTCGGGGCTGTAGCTaGTGCCGTGGTAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLRGCS*CRGNPE
Trigger: CTCTGGGTTACCACGGCAGCAGCTACAGCCCCGAAG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCGGCTGGCTGGTGTTaGCTGGAGACTTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALAAGWC*LETWSP
Trigger: TGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCGGCTGGCTGGTGTTaGCTGGAGACTTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARAAGWC*LETWSP
Trigger: TGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCAGCCCCATGTTGGTaGTGGCATGTTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPAPCW*WHVPAP
Trigger: CGGTGCAGGAACATGCCAGCACCAACATGGGGCTGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTTTCGGCTGCTGGGTCTaGCAGAGACCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLFGCWV*QRPWPS
Trigger: GGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAA...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGTTCGGCTGCTGGGTCTaGCAGAGACCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ECLVLRAEQWLGLLVPGVFGCWV*QRPWPS
Trigger: GGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAA...CACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCACTTGGCTTTTCGGCTaGTGGGTCTGCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGTWLFG*WVCQRP
Trigger: AGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCTGTTCTGAGTCACTCGCTGTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGGCGGCGTCCGGCGGTTaGAGTCTCCCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PCSESLAVGECLVLRAEQAASGG*SLPPSA
Trigger: TGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGC...CTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGCGAGTGACTCAGAACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR GCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQESVSY*EQSSGL
Trigger: CAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCAGCCGCCCTGCTCCTaGAGGGCCGTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAQPPCS*RAVPVA
Trigger: AGCCACAGGAACGGCCCTGCAGGAGCAGGGCGGCTG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGTCGGCAGCCGCCCTaGTCCTGCAGGGCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLASRQPP*SCRAVP
Trigger: AGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGCAGTGGCGTGGAGGTaGGTGGTCATCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWAVAWR*VVILLW
Trigger: CCAAAGCAGGATGACCACGCACCTCCACGCCACTGC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCACCGACTGTCGGCCTaGACACGCCTCTTGAACGGT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWHRLSA*TRLLNG
Trigger: ACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCGGTG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGCCCTCCACGTCTGTaGCACAGGCTGTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALGPPRL*HRLCGS
Trigger: GGATCCACACAGCCTGTGGCACAGACGTGGAGGGCC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTTCCAGAATCCGATGTaGAGCTTCAGCCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRFQNPM*SFSLLP
Trigger: CGGAAGAAGGCTGAAGCTGCACATCGGATTCTGGAA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAGTACTCGCGCACCTTaGTCTCCTTGGCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSTRAP*SPWPAA
Trigger: GGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTCCTGCAGCTCGCGCTaGTTGCGGATCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWSCSSR*LRISGN
Trigger: GTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCAGGA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTTCTCCAGGTTCTCCTaGTCTGAGAGGCCATCGATG +
Preference number: 4 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTFSRFS*SERPSM
Trigger: CATCGATGGCCTCTCAGAGCAGGAGAACCTGGAGAA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCACCCTGCTCTGCATaGGCTCCTGCAGCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTPPCSA*APAARA
Trigger: AGCGCGAGCTGCAGGAGCGCATGCAGAGCAGGGTGG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405201.5
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTTGTTGCTGCTGCTaGCTCTTGCCGCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHCCCCC*LLPRRR
Trigger: TCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCAGTTTTGCGGCCTTTaGAGGCCACAGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGQFCGL*RPQPPS
Trigger: AGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACATGCAGCCTCCTCGCTaGCCGCCGCCGGCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNMQPPR*PPPALS
Trigger: AGAAAGCGCCGGCGGCGGCCAGCGAGGAGGCTGCAT...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACCGTCGGCGCCCAGGGTaGCTGGGGGCTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDRRRPG*LGAWAH
Trigger: ATGGGCCCAAGCCCCCAGCCACCCTGGGCGCCGACG...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCGTCGGCGCCCAGGGTaGCTGGGGGCTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQRRRPG*LGAWAH
Trigger: ATGGGCCCAAGCCCCCAGCCACCCTGGGCGCCGACG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACCGCGTCCTTGCCCTTaGCCGGCCCCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTPRPCP*PAPPRL
Trigger: AAGCCGAGGAGGGGCCGGCCAAGGGCAAGGACGCGG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCGCGTCCTTGCCCTTaGCCGGCCCCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPRPCP*PAPPRL
Trigger: AAGCCGAGGAGGGGCCGGCCAAGGGCAAGGACGCGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACCGAGCTCTTGGCTGTaGTGGCCCTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTPSSWL*WPCRSR
Trigger: GCGGGAGCGGCAGGGCCACCACAGCCAAGAGCTCGG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCTGGGGTGAGGCATTaGCCCGGGGGTCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSGVRH*PGGRQS
Trigger: CGACTGGCGACCCCCGGGCCAATGCCTCACCCCAGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCTGAGTACGGGACGTaGAGCTGGACCGACATTCCT +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSEYGT*SWTDIP
Trigger: AGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGAGGGTGCCAGCTTTTTaGGGTCCATGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLRVPAF*GPWAGA
Trigger: TGCCCCTGCCCATGGACCCCAAAAAGCTGGCACCCT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCCCAGCCTGGCCCCGTaGGGACAGCTGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNPSLAP*GQLLLL
Trigger: AAGCAGGAGCAGCTGTCCCCACGGGGCCAGGCTGGG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAAGCACGGACGCCTCCTaGGCTGTGGGCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSTDAS*AVGTPR
Trigger: CCTGGGGGTGCCCACAGCCCAGGAGGCGTCCGTGCT...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCCTCCTTGGAGCACTaGGTCACAGACATGCCACCC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRSSLEH*VTDMPP
Trigger: GGGTGGCATGTCTGTGACCCAGTGCTCCAAGGAGGA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTGTCATAGGTGCGCTTaGGGGCGGCCGTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARCHRCA*GRPSHG
Trigger: CCCATGAGACGGCCGCCCCCAAGCGCACCTATGACA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTCTTTGAGGTGGTaGGGGCTGTGTCGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHCSLRW*GLCRSG
Trigger: GCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTGCTCTTTGAGGTGGTaGGGGCTGTGTCGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARCSLRW*GLCRSG
Trigger: GCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCGCGCGGGATCTCATaGATGGAGCGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSRGIS*MERPAS
Trigger: GGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTTTTGGAGCCAGTGGTaGACGCGCCGGTGTCGTACT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQFWSQW*TRRCRT
Trigger: AGTACGACACCGGCGCGTCCACCACTGGCTCCAAAA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGCTTTTTGGAGCCAGTaGTGGACGCGCCGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWAFWSQ*WTRRCR
Trigger: ACGACACCGGCGCGTCCACCACTGGCTCCAAAAAGC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTACGTCGTGCTTTTTaGAGCCAGTGGTGGACGCGC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVRRAF*SQWWTR
Trigger: GCGCGTCCACCACTGGCTCCAAAAAGCACGACGTAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAACCTCGTGGGAGGTaGCCGGCAAAGGGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNEPRGR*PAKGAP
Trigger: CGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCTCATAGGGCGAGATaGGGTGTGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARAHRAR*GVGGAR
Trigger: CCGAGCACCACCCACACCCCATCTCGCCCTATGAGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCGGATGAGGTAGGGTaGGTACAGGTGCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLADEVG*VQVRVG
Trigger: ACCTACCCGCACCTGTACCCACCCTACCTCATCCGC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTGGGCCATGGCGGTaGCCGCGTTGTGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTAGPWR*PRCGAS
Trigger: AGATGCACCACAACGCGGCCACCGCCATGGCCCAGC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCAGCTCGCTGGGCCATaGCGGTGGCCGCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNQLAGP*RWPRCG
Trigger: ACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAGCATATCAGCTCGCTaGGCCATGGCGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSISAR*AMAVAA
Trigger: CGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGGTGGCTGGGGTGCCTaGTGTCGGGGGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHGGWGA*CRGHEH
Trigger: GTGCTCGTGCCCCCGACACCAGGCACCCCAGCCACC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGTGGCTGGGGTGCCTaGTGTCGGGGGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTGGWGA*CRGHEH
Trigger: GTGCTCGTGCCCCCGACACCAGGCACCCCAGCCACC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTGTGTTGGACCTCCTaGGGAGAGTGGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVCWTS*GEWGAA
Trigger: AGCAGCTCCCCACTCTCCCCAGGAGGTCCAACACAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCGAGGACGTGGTGGTTaGTTTTGTCAAGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRGRGG*FCQVCW
Trigger: CCAACACACTTGACAAAACCAACCACCACGTCCTCG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRRTRTW*LVLSSV
Trigger: CACACTTGACAAAACCAACCACCACGTCCTCGTCCG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTACCAGGTCTCCAGATaGGTGCGTGCTCCACCGTCG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVYQVSR*VRAPPS
Trigger: CGACGGTGGAGCACGCACCCATCTGGAGACCTGGTA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGAGATGGGCGAGTGCTaGTGGGCATGGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPAREMGEC*WAWEWE
Trigger: CTCCCACTCCCATGCCCACCAGCACTCGCCCATCTC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGTCCGAGGGGAGATaGGCGAGTGCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTGSEGR*ASAGGH
Trigger: ATGCCCACCAGCACTCGCCCATCTCCCCTCGGACCC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCAGTGGGCAGTGGGTaGCAGGTGGGAATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALPVGSG*QVGMWQ
Trigger: CTGCCACATTCCCACCTGCCACCCACTGCCCACTGG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGTGCGGGCGATGGTaGCGTGGCCAGAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGCGRW*RGQRQE
Trigger: CTCCTGTCTCTGGCCACGCCACCATCGCCCGCACCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCCGGCGGGTCCGGGCTaGCGTGGTGAGGTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREPAGPG*RGEVRG
Trigger: ACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCTCTTCCAGGTGCTTaGGGAGCCCCTTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHALPGA*GAPCRG
Trigger: CCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGAGCTCCCCCTCCAGGTaGCTCTTGTCGAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLSSPSR*LLSSSS
Trigger: GGAAGAGCTCGACAAGAGCCACCTGGAGGGGGAGCT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGGGCTGGACGAGGGCTaGCTCTCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQGLDEG*LSGSGR
Trigger: GCGGCCGCTGCCTGAGAGCCAGCCCTCGTCCAGCCC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCGCTGAGCTGCTGTaGGTGGTGCCGGGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHCAELL*VVPGVV
Trigger: GACTACACCCGGCACCACCCACAGCAGCTCAGCGCA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCGTCTTGTTTGGCTCTaGAGACCTCTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRLVWL*RPLAPF
Trigger: GAAGGGGGCAAGAGGTCTCCAGAGCCAAACAAGACG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGACCGACGTCTTGTTTaGCTCTGGAGACCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQDRRLV*LWRPLA
Trigger: GGCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGACCGACGTCTTGTTTaGCTCTGGAGACCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGDRRLV*LWRPLA
Trigger: GGCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWKKAGG*LVLPGD
Trigger: GTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCATCTCCGTCCCAGGCTaGCTGATATTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRISVPG*LILYSG
Trigger: GCCTGAATACAATATCAGCCAGCCTGGGACGGAGAT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCCCATGTTGGTGCTaGCATGTTCCTGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLAPCWC*HVPAPP
Trigger: AGGCGGTGCAGGAACATGCCAGCACCAACATGGGGC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGGCGAGGTGAGTGTGTaGTCACTCCGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLGEVSV*SLRPSA
Trigger: TGCTGACGGACGGAGTGACCACACACTCACCTCGCC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTGGCTTTTCGGCTGCTaGGTCTGCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQWLFGC*VCQRPW
Trigger: CCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGGCTTTTCGGCTGCTaGGTCTGCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRWLFGC*VCQRPW
Trigger: CCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTCCTCGTCCCAGGCGTaGTGGGGGCCAGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSSSQA*WGPARG
Trigger: GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGAGCAGAGCAGTGGCTTaGGCTCCTCGTCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SESVSYCEQSSGLGSSSQSRAVA*APRPRR
Trigger: ACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCT...CTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARLWTDR*MEAQAD
Trigger: GTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGGGCTaGACAGGGCCTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNERTGG*TGPASI
Trigger: GATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCAGCAATCTCGTTGGCTaGGGCAGTCTGTGGGGACCG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVSNLVG*GSLWGP
Trigger: CGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGAGCAATCTCGTTGGCTaGGGCAGTCTGTGGGGACCG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWSNLVG*GSLWGP
Trigger: CGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCACCACCCTGCGCAGATaGCGGCCACAGAATACGCAT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPTTLRR*RPQNTH
Trigger: ATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTATCCCGACATGGTGGTaGGGGTCGGCGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAIPTWW*GSAGSC
Trigger: GCAGCTCCCCGCCGACCCCCACCACCATGTCGGGAT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGTGCCACAGGCTGTGTaGATCCCGACATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLVPQAV*IPTWWW
Trigger: CCACCACCATGTCGGGATCCACACAGCCTGTGGCAC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCCGGGCGATCTGCACTaGGTAGGAAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARPGDLH*VGKAVG
Trigger: CCCCACAGCCTTTCCTACCCAGTGCAGATCGCCCGG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTCGGGCAGGTATGAGTaGGACTCTGGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALSGRYE*DSGRRW
Trigger: CCACCTGCGGCCAGAGTCCCACTCATACCTGCCCGA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGGATCAGCTCCTCCTTaGACAGCCGTGGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARGSAPP*TAVAAP
Trigger: TGGTGCCGCCACGGCTGTCCAAGGAGGAGCTGATCC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGACGCGGTCCATGTTCTaGATCAGCTCCTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQTRSMF*ISSSLD
Trigger: GTCCAAGGAGGAGCTGATCCAGAACATGGACCGCGT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACAGCGGCAGCTCCACCTaGGGCCCCAGGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSGSST*GPRPSR
Trigger: TCTGGAAGGCCTGGGGCCCCAGGTGGAGCTGCCGCT...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGTGTAGGGGAATGGCGTaGAACCTGGTGCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: CLVLRAEQWLGLLVPGVVCRGMA*NLVPTC
Trigger: GCAGGTGGGCACCAGGTTCCACGCCATTCCCCTACA...CACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CCA 90 bp TGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGTTGTAGGGGAATaGCGTGGAACCTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CLVLRAEQWLGLLVPGVVGVVGE*RGTWCP
Trigger: TGGGCACCAGGTTCCACGCCATTCCCCTACAACCCC...CACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR TCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCTTCCTCTCCAGGAATaGTGCGATCAGGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRLPLQE*CDQAKV
Trigger: AACTTTGGCCTGATCGCATCATTCCTGGAGAGGAAG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCGTCTGTCTTCTCCTTaGGGAGGTCTTCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRLSSP*GGLPCR
Trigger: ACGACAAGGAAGACCTCCTCAAGGAGAAGACAGACG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGATGCTCTCGGTGTCTaGGCTGTTGTTGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRDALGV*AVVDSG
Trigger: GCCACTGTCAACAACAGCTCAGACACCGAGAGCATC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTTGGCGGCCTCAGTGTaGGGAGAGGGGATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTLAASV*GEGMLS
Trigger: CGAGAGCATCCCCTCTCCTCACACTGAGGCCGCCAA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCTGCTGCCAGGCTGCTaGGGGGCGTCGCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRILLPGC*GASLSG
Trigger: GCCGGAGAGCGACGCCCCTCAGCAGCCTGGCAGCAG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTGGGAATGCCTTTGGTaGTGCTTCCGCCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWWECLW*CFRPEL
Trigger: CAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGAGGGATCCCTTGTGTaGTGGACCCGCGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPAREGSLV*WTRGCG
Trigger: ACCACATCCGCGGGTCCATCACACAAGGGATCCCTC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGCCGGGGCTGCCGATaGGGGAGCGTACGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGRGCR*GSVRRA
Trigger: AGCACGACGTACGCTCCCTCATCGGCAGCCCCGGCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCCAGCTCAGGCACAATaGCCGGGGCGCCGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREPAQAQ*PGRRAQ
Trigger: TTGCGCGCGGCGCCCCGGTCATTGTGCCTGAGCTGG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCGGGGTAGCCGCGGATaGGGTAGGGTGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLARGSRG*GRVGTG
Trigger: ACCTGTACCCACCCTACCTCATCCGCGGCTACCCCG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATCCGGGCTGGCGTGGTaGGGTGCGAGGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGSGLAW*GARFFA
Trigger: TGCGAAGAACCTCGCACCTCACCACGCCAGCCCGGA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGTGGGTCAGACTGGGTaGGCTCACAGGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAVGQTG*AHRADG
Trigger: CCCGTCAGCCCTGTGAGCTCACCCAGTCTGACCCAC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGTGGGTCAGACTGGGTaGGCTCACAGGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNVGQTG*AHRADG
Trigger: CCCGTCAGCCCTGTGAGCTCACCCAGTCTGACCCAC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTVTTRW*PLTPGA
Trigger: CGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCAC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCTTGCTTCTTGGACTTaGCCATGGCGGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGLASWT*PWRSCS
Trigger: AGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACGCCACCTGGCGAGGTaGGTGTGTGGTCACTCCGTC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGRHLAR*VCGHSV
Trigger: GACGGAGTGACCACACACTCACCTCGCCAGGTGGCG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGPTRGW*AASGGC
Trigger: GCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTCCGCCCACCTGGCCTaGCTTGGTTTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLSAHLA*LGFQQS
Trigger: AGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACTCGATGGGCGGCGGTaGCACGGGCTTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTLDGRR*HGLLRL
Trigger: GAGCCTGAGAAGCCCGTGTCACCGCCGCCCATCGAG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCCATCGATGATCTCTaGCACCTCGTGCTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARAIDDL*HLVLAA
Trigger: CGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AAATCACAGCAGCGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGAAGGCCACGAGTCCGTaGCCTGATGGAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KSQQRDWAFYPRPRVRDLKATSP*PDGAGS
Trigger: GGAGCCAGCTCCATCAGGTCACGGACTCGTGGCCTT...CAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGCTGCTGCTGGCTCTTaGCGCGGCGCCGATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTAAAGS*RGADSS
Trigger: GGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGCTGCTGCTGGCTCTTaGCGCGGCGCCGATAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHAAAGS*RGADSS
Trigger: GGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGGCTGTTGGCAGTTTTaGGGCCTTTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWGCWQF*GLWRPQ
Trigger: CTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGCTGTTGGCAGTTTTaGGGCCTTTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWGCWQF*GLWRPQ
Trigger: CTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTTCAGCTTGTGCTGCTaGAAGATCTCATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRFSLCC*KISSRF
Trigger: GAACCTCGATGAGATCTTGCAGCAGCACAAGCTGAA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTATCTTCAGCTTGTGCTaGTGCAAGATCTCATCGAGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRIFSLC*CKISSR
Trigger: CCTCGATGAGATCTTGCAGCAGCACAAGCTGAAGAT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTCCATCTTCAGCTTGTaGTGCTGCAAGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACSIFSL*CCKISS
Trigger: CGATGAGATCTTGCAGCAGCACAAGCTGAAGATGGA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGCTTGGGCCCATTCTaGCCTGTGTCCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGLGPF*PVSLAA
Trigger: GGCCGCCAAGGACACAGGGCAGAATGGGCCCAAGCC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCTCCACTGGGGGCGCTaGTGCGGTCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLALHWGR*CGLLLL
Trigger: AAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTGGAG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCTCCACTGGGGGCGCTaGTGCGGTCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNLHWGR*CGLLLL
Trigger: AAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTGGAG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTGGCTGTGGTGGCCCTaGCGCTCCCGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHWLWWP*RSRPPS
Trigger: AGAAGGAGGGCGGGAGCGGCAGGGCCACCACAGCCA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGCGTCGCTCTCCGGCTaGAGGTTTTGCGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNASLSG*RFCGGG
Trigger: ACCGCCACCGCAAAACCTGCAGCCGGAGAGCGACGC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGCGTCGCTCTCCGGCTaGAGGTTTTGCGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAASLSG*RFCGGG
Trigger: ACCGCCACCGCAAAACCTGCAGCCGGAGAGCGACGC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTTCTGGGCCTCGGCTaGGAAGGCTGGGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALLLGLG*EGWEEH
Trigger: GTGTTCTTCCCAGCCTTCGCAGCCGAGGCCCAGAAG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCGAGGACGCTGGGGTaGTTGGCAGAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHSRTLG*LAEEMR
Trigger: CCTCATCTCCTCTGCCAAGCACCCCAGCGTCCTCGA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVEMAPI*LSRTLG
Trigger: CCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGTCCTGAGCTGCTTCTaGCGTCCTCCTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLVLSCF*RPPWST
Trigger: AGTGCTCCAAGGAGGACGGCAGAAGCAGCTCAGGAC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGTCCTGAGCTGCTTCTaGCGTCCTCCTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWVLSCF*RPPWST
Trigger: AGTGCTCCAAGGAGGACGGCAGAAGCAGCTCAGGAC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCATCATGTCATAGGTaGGCTTGGGGGCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALPSCHR*AWGRPS
Trigger: AGACGGCCGCCCCCAAGCGCACCTATGACATGATGG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCGCGGATGTGGTGCTaGTCTTTGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTPRMWC*SLRWWG
Trigger: CCCCCACCACCTCAAAGAGCAGCACCACATCCGCGG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTATCACATCCAGCGGGTaGACGGGTGGGAACGTCCGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTITSSG*TGGNVR
Trigger: CCGGACGTTCCCACCCGTGCACCCGCTGGATGTGAT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGAAAGGCTGCCCTCCTaGAGGCGCGGCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAERLPS*RRGVGS
Trigger: GGAGCCCACGCCGCGCCTGCAGGAGGGCAGCCTTTC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTTTCGGTCCTGGGATaGCTTGCTGGACGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRLSVLG*LAGRKA
Trigger: AGCCTTTCGTCCAGCAAGGCATCCCAGGACCGAAAG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACTGCGTCCAGAGGGATaGCGCGGGGTATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGLRPEG*RGVWRW
Trigger: CCACCTCCATACCCCGCGGCATCCCTCTGGACGCAG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGTAGTAGGCAGCGGCTaGGTCCAGAGGGATGCCGCG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNVVGSG*VQRDAA
Trigger: CGCGGCATCCCTCTGGACGCAGCCGCTGCCTACTAC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTGGCGGTGGCTGGGGTaGCTGGTGTCGGGGGCACGA +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKWRWLG*LVSGAR
Trigger: TCGTGCCCCCGACACCAGGCACCCCAGCCACCGCCA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCTCCAGATGGGTGCGTaGTCCACCGTCGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTLQMGA*STVVVD
Trigger: GTCCACCACGACGGTGGAGCACGCACCCATCTGGAG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACAGCACACTGGGTCTCTaGTGGAGGGCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHSTLGL*WRASWV
Trigger: GACCCAGGATGCCCTCCAGCAGAGACCCAGTGTGCT...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTGGCGTGGTGAGGTaGGAGGTTCTTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTAGVVR*EVLRRG
Trigger: ACCCCTGCGAAGAACCTCGCACCTCACCACGCCAGC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHALAPS*PPVGTQ
Trigger: CTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCGGCTGGCTGGTGTTaGCTGGAGACTTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTAAGWC*LETWSP
Trigger: TGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AAATCACAGCAGCGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGGCGGCTGGCTGGTGTTaGCTGGAGACTTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KSQQRDWAFYPRPRVRDLAAGWC*LETWSP
Trigger: TGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGC...CAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGCGGCGTCCGGCGGTTaGAGTCTCCCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTAASGG*SLPPSA
Trigger: TGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACCGCCTGCGTGTGGCTaGCACACGCCTGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGPPACG*HTPAVP
Trigger: GGGCACGGCAGGCGTGTGGCAGCCACACGCAGGCGG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGTGCGTGGTCATCCTaGTTTGGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGAWSS*FGSLAA
Trigger: GGCGGCCAGGGACCCAAAGCAGGATGACCACGCACC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGCATCGAATTCATTCTaGCCAAGGAAGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGASNSF*PRKGGR
Trigger: CCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTAGAATACCACCACCCTaGGCAGATGGCGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLRIPPP*ADGGHR
Trigger: TCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCT...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACAGCCCGACGTCCGTGTaGGTCCGGGCGATCTGCACT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSPTSV*VRAICT
Trigger: AGTGCAGATCGCCCGGACGCACACGGACGTCGGGCT...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGACACCGGTTCCAGCTTaGCCGTCAGGCTACGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARTPVPA*PSGYGP
Trigger: AGGACCGTAGCCTGACGGGCAAGCTGGAACCGGTGT...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTTCAGCTTAGAGATCTaGTGCTCTACCATGGTGATC +
Preference number: 4 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPFSLEI*CSTMVI
Trigger: GATCACCATGGTAGAGCAGCAGATCTCTAAGCTGAA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCAGCTCGCGCTGCTTaGGGATCTCAGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARAARAA*GSQGTA
Trigger: AGCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAACACCTCGTGCTCGCTaGGGGCGGCCGACATGGACA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGTPRAR*GRPTWT
Trigger: TGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCATGAACTTGATGCGCTaGTGGTCAGCGTCGTACAGC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGMNLMR*WSASYS
Trigger: GCTGTACGACGCTGACCAGCAGCGCATCAAGTTCAT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTATGAACTTGATGCGCTaGTGGTCAGCGTCGTACAGC +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAMNLMR*WSASYS
Trigger: GCTGTACGACGCTGACCAGCAGCGCATCAAGTTCAT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCATGAACTTGATGCGCTaGTGGTCAGCGTCGTACAGC +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSMNLMR*WSASYS
Trigger: GCTGTACGACGCTGACCAGCAGCGCATCAAGTTCAT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTAAGGTCTCCTTCTCCTaGTCACTCCACATGTTCATG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRKVSFS*SLHMFM
Trigger: CATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTGGCCCACCCTGCTCTaGATGCGCTCCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAWPTLL*MRSCSS
Trigger: CGAGCTGCAGGAGCGCATGCAGAGCAGGGTGGGCCA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405201.5
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATACATGGACAGCCCACTaGCCCGCTGGCCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHTWTAH*PAGPPC
Trigger: GCAGGGTGGGCCAGCGGGGCAGTGGGCTGTCCATGT...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCAGTTTTGCGGCCTTTaGAGGCCACAGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQQFCGL*RPQPPS
Trigger: AGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTCTTCCCTGGCTGTTaGCAGTTTTGCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVFPGC*QFCGLW
Trigger: CCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTCTCATTCAGCTCCATaGAGGCCAGCTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLSHSAP*RPARRS
Trigger: AGAGCGCCGAGCTGGCCTCCATGGAGCTGAATGAGA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCTGCCCTGTGTCCTTaGCGGCCTCAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHSALCP*RPQCEE
Trigger: CTCCTCACACTGAGGCCGCCAAGGACACAGGGCAGA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGTGGCTGGGGGCTTaGGCCCATTCTGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGWLGA*AHSALC
Trigger: ACACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGGCGCCCAGGGTGGCTaGGGGCTTGGGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQGAQGG*GLGPIL
Trigger: CAGAATGGGCCCAAGCCCCCAGCCACCCTGGGCGCC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACCGGGGTGGGCTCAGTaGGGGCCGGGATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGPGWAQ*GPGCPP
Trigger: CGGAGGACATCCCGGCCCCCACTGAGCCCACCCCGG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCCGAGCTCTTGGCTGTaGTGGCCCTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQPSSWL*WPCRSR
Trigger: GCGGGAGCGGCAGGGCCACCACAGCCAAGAGCTCGG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATCCCCAGGCAGCTTCTaGGCCTCGGCTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGSPGSF*ASAAKA
Trigger: AGCCTTCGCAGCCGAGGCCCAGAAGCTGCCTGGGGA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGCCGGGCAGTGTCATaGAGGCCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREGRAVS*RPRGSG
Trigger: CCCACTGCCCCTGGGCCTCCATGACACTGCCCGGCC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCTCTCGAGGACGCTaGGGTGCTTGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTASRGR*GAWQRR
Trigger: TCTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTACATTCCTTGGGAGATaGCACCTATTTGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRTFLGR*HLFASR
Trigger: TCGAGAGGCAAATAGGTGCCATCTCCCAAGGAATGT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTCAGCTGGCGTGCCGTaGGTGATGGAGCCGCGGTAT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSAGVP*VMEPRY
Trigger: ATACCGCGGCTCCATCACCCACGGCACGCCAGCTGA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTTCTGCCGTCCTCCTTaGAGCACTGGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRFCRPP*STGSQT
Trigger: TGTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTTCTGCCGTCCTCCTTaGAGCACTGGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPFCRPP*STGSQT
Trigger: TGTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTGCTGGCTGAGGAGATaGCTCTGCCCACGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNCWLRR*LCPRGP
Trigger: AGGGCCGCGTGGGCAGAGCCATCTCCTCAGCCAGCA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTGCTCTTTGAGGTGGTaGGGGCTGTGTCGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTCSLRW*GLCRSG
Trigger: GCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCCCGCTTTAGGAGCTTaGCCTCCCGACGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARPALGA*PPDAGS
Trigger: ACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGCCACCAGGCCCTCATaGGCCGGCTTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNATRPS*AGFSFR
Trigger: CCTGAAGCTGAAGCCGGCCCATGAGGGCCTGGTGGC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTTTTGGAGCCAGTGGTaGACGCGCCGGTGTCGTACT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVFWSQW*TRRCRT
Trigger: AGTACGACACCGGCGCGTCCACCACTGGCTCCAAAA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTTTTGGAGCCAGTGGTaGACGCGCCGGTGTCGTACT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWFWSQW*TRRCRT
Trigger: AGTACGACACCGGCGCGTCCACCACTGGCTCCAAAA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGCGTGGGCTCCCGCGTaGTCACGGGCGAACCTCGTG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREAWAPA*SRANLV
Trigger: CACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGTCAGCTTTCGGTCCTaGGATGCCTTGCTGGACGAA +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRVSFRS*DALLDE
Trigger: TTCGTCCAGCAAGGCATCCCAGGACCGAAAGCTGAC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGATGCCGCGGGGTATaGAGGTGGGGTCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGCRGV*RWGRRP
Trigger: TGGCCTTCGACCCCACCTCCATACCCCGCGGCATCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGCGGTGGCCGCGTTGTaGTGCATCTGCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAAVAAL*CICCEV
Trigger: CACCTCGCAGCAGATGCACCACAACGCGGCCACCGC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGCATATCAGCTCGCTaGGCCATGGCGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLASISAR*AMAVAA
Trigger: CGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAAGCATATCAGCTCGCTaGGCCATGGCGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGSISAR*AMAVAA
Trigger: CGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGTGGCTGGGGTGCCTaGTGTCGGGGGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGGWGA*CRGHEH
Trigger: GTGCTCGTGCCCCCGACACCAGGCACCCCAGCCACC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGTCCATGGCGGTGGCTaGGGTGCCTGGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKVHGGG*GAWCRG
Trigger: CCCCCGACACCAGGCACCCCAGCCACCGCCATGGAC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGTCCATGGCGGTGGCTaGGGTGCCTGGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREVHGGG*GAWCRG
Trigger: CCCCCGACACCAGGCACCCCAGCCACCGCCATGGAC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGTGTGTTGGACCTCCTaGGGAGAGTGGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALVCWTS*GEWGAA
Trigger: AGCAGCTCCCCACTCTCCCCAGGAGGTCCAACACAC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSRTRTW*LVLSSV
Trigger: CACACTTGACAAAACCAACCACCACGTCCTCGTCCG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTATGGGCGAGTGCTGGTaGGCATGGGAGTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAMGECW*AWEWEA
Trigger: CGCCTCCCACTCCCATGCCCACCAGCACTCGCCCAT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAATGGGCGAGTGCTGGTaGGCATGGGAGTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGMGECW*AWEWEA
Trigger: CGCCTCCCACTCCCATGCCCACCAGCACTCGCCCAT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATGGACCTCAGGACCGTaGGCGTGCTGGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGWTSGP*ACWAPQ
Trigger: CTGTGGAGCCCAGCACGCCCACGGTCCTGAGGTCCA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATGGCAGGTGGGAATGTaGCAGCCGGGCGAACGGGTG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGWQVGM*QPGERV
Trigger: CACCCGTTCGCCCGGCTGCCACATTCCCACCTGCCA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGAGCGGGCTGGGGGCTTaGCGAGGAAGGCATGGCCGG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASGLGA*RGRHGR
Trigger: CCGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCT...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGCTCCGAGCCCTTGCTaGGGGAGGAGGCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDAPSPC*GRRRAP
Trigger: TGGAGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGCTCCGAGCCCTTGCTaGGGGAGGAGGCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQAPSPC*GRRRAP
Trigger: TGGAGCCCGCCTCCTCCCCCAGCAAGGGCTCGGAGC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAAGCTTCACGGGGCCTaGCTGCTTGGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAKLHGA*LLGPQL
Trigger: GAGCTGCGGCCCAAGCAGCCAGGCCCCGTGAAGCTT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGACCCCTGGGGCGGTCTaGAGCAGCGGGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRETPGAV*SSGLDE
Trigger: CTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGACCCCTGGGGCGGTCTaGAGCAGCGGGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKTPGAV*SSGLDE
Trigger: CTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGT...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCAGGACGGGGCAGCTaGCCCCAGGGAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGPGRGS*PQGRSR
Trigger: TCTACTCCTTCCCTGGGGCCAGCTGCCCCGTCCTGG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATTGCCCCCTTCGCTGTaGGGGGAGCCACGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLPPSL*GEPRAG
Trigger: CCCGGCCCGTGGCTCCCCCCACAGCGAAGGGGGCAA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALLAEEG*RLAGVA
Trigger: GGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHLAEEG*RLAGVA
Trigger: GGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCCTCCAGCCCCATGTTaGTGCTGGCATGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLPPAPC*CWHVPA
Trigger: TGCAGGAACATGCCAGCACCAACATGGGGCTGGAGG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGGGTTGTAGGGGAATaGCGTGGAACCTGCGGACGA +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALGVVGE*RGTCGR
Trigger: TCGTCCGCAGGTTCCACGCCATTCCCCTACAACCCC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATCCTCGTCCCAGGCGTaGTGGGGGCCAGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSSSQA*WGPARG
Trigger: GCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNQGLLP*LGESAA
Trigger: GGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAQGLLP*LGESAA
Trigger: GGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCTGGCCGCCTGCGTGTaGCTGCCACACGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRELAACV*LPHACR
Trigger: ACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGGGAGGCAGTGGCGTaGAGGTGCGTGGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGEAVA*RCVVIL
Trigger: CAGGATGACCACGCACCTCCACGCCACTGCCTCCCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTCCAGCAATCTCGTTaGCTGGGGCAGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWFQQSR*LGQSVG
Trigger: CCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCACCTGGCCTGACTTaGTTTCCAGCAATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPPGLT*FPAISL
Trigger: CAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCCACCTGGCCTGACTTaGTTTCCAGCAATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAPPGLT*FPAISL
Trigger: CAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCCCCCAGGCCGCACCTaGCCCTTTTGTCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQPPGRT*PFCPPT
Trigger: GGTGGGCGGACAAAAGGGCCAGGTGCGGCCTGGGGG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGTAGCGGGGCTCAGTaGCCCTCCACGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGSGAQ*PSTSVP
Trigger: TGGCACAGACGTGGAGGGCCACTGAGCCCCGCTACC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCTCCGCCGCTGGGGCTaGATGATGGAGCCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALRRWG*MMEPGD
Trigger: GTCGCCCGGCTCCATCATCCAGCCCCAGCGGCGGAG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCTCCGCCGCTGGGGCTaGATGATGGAGCCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQLRRWG*MMEPGD
Trigger: GTCGCCCGGCTCCATCATCCAGCCCCAGCGGCGGAG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGCACCTTGCTCTCCTTaGCCCGCCGCCGGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHAPCSP*PAAGGC
Trigger: ACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
3UTR CAA 72 bp CGCACCTGGCCCTTTTGTCCGCCCACCTGGCCTGACTaGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: RTWPFCPPTWPD*VSSNLVGWGSL
Trigger: CAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCCAGGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCTTCCTCTCCAGGAATaGTGCGATCAGGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGLPLQE*CDQAKV
Trigger: AACTTTGGCCTGATCGCATCATTCCTGGAGAGGAAG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCGTCTGTCTTCTCCTTaGGGAGGTCTTCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPRLSSP*GGLPCR
Trigger: ACGACAAGGAAGACCTCCTCAAGGAGAAGACAGACG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGTCGTTGTCCTCCCCTaGGGTGTCGTCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARVVVLP*GVVCLL
Trigger: GAGAAGACAGACGACACCTCAGGGGAGGACAACGAC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTTGGCGGCCTCAGTGTaGGGAGAGGGGATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNLAASV*GEGMLS
Trigger: CGAGAGCATCCCCTCTCCTCACACTGAGGCCGCCAA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCCGTGCACTCGCTCTTaGCGGGCTCCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREPCTRS*RAPRPS
Trigger: GGAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCAGTGGCTTCTGGGGTaGGGCATTGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQQWLLG*GIGPGV
Trigger: GACCCCCGGGCCAATGCCTCACCCCAGAAGCCACTG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACAGCGTAGGAGAAGGCTaGGGGGTCCGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDSVGEG*GVRGMR
Trigger: CCGCATGCCCCGGACCCCTCAGCCTTCTCCTACGCT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTGGGAATGCCTTTGGTaGTGCTTCCGCCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARWECLW*CFRPEL
Trigger: CAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATGGAGCCGCGGTATGTaGTGGCGCTGTCCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTWSRGM*WRCPRA
Trigger: TGCCCTCGGACAGCGCCATCACATACCGCGGCTCCA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGCCGGGGCTGCCGATaGGGGAGCGTACGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGGRGCR*GSVRRA
Trigger: AGCACGACGTACGCTCCCTCATCGGCAGCCCCGGCC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACCAGCTCAGGCACAATaGCCGGGGCGCCGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGPAQAQ*PGRRAQ
Trigger: TTGCGCGCGGCGCCCCGGTCATTGTGCCTGAGCTGG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGAAAAGGGTTTACTTTaGGTCTTTTCCCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGEKGLL*VFSRCG
Trigger: CCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGTGAGCTCACAGGGCTaGCGGGCTCCACCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDVSSQG*RAPPLR
Trigger: CCGAAGGGGTGGAGCCCGTCAGCCCTGTGAGCTCAC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGTGAGCTCACAGGGCTaGCGGGCTCCACCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKVSSQG*RAPPLR
Trigger: CCGAAGGGGTGGAGCCCGTCAGCCCTGTGAGCTCAC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTTGCTTCTTGGACTTaGCCATGGCGGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRLASWT*PWRSCS
Trigger: AGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCTTGCTTCTTGGACTTaGCCATGGCGGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQLASWT*PWRSCS
Trigger: AGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCCTTGGTCCTGCGAGTaGTGGGGTCACCGACTGTCG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNPWSCE*WGHRLS
Trigger: CGACAGTCGGTGACCCCATCACTCGCAGGACCAAGG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCTCGATGGGCGGCGGTaGCACGGGCTTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALDGRR*HGLLRL
Trigger: GAGCCTGAGAAGCCCGTGTCACCGCCGCCCATCGAG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCAGGTTCTCCTGCTCTaGGAGGCCATCGATGATCTC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLQVLLL*EAIDDL
Trigger: GAGATCATCGATGGCCTCTCAGAGCAGGAGAACCTG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCAGGTTCTCCTGCTCTaGGAGGCCATCGATGATCTC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWQVLLL*EAIDDL
Trigger: GAGATCATCGATGGCCTCTCAGAGCAGGAGAACCTG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGCTGCTGCTGGCTCTTaGCGCGGCGCCGATAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAAAAGS*RGADSS
Trigger: GGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCGATGGCCGACCAGTTaGGGCCGTGTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNRWPTS*GRVPGD
Trigger: GTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCGATGGCCGACCAGTTaGGGCCGTGTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLARWPTS*GRVPGD
Trigger: GTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTCCATCTTCAGCTTGTaGTGCTGCAAGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRSIFSL*CCKISS
Trigger: CGATGAGATCTTGCAGCAGCACAAGCTGAAGATGGA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGTGAGGAGAGGGGATaGTCTCGGTGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVCEERG*SRCLSC
Trigger: ACAGCTCAGACACCGAGAGCATCCCCTCTCCTCACA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGGCTTGGGCCCATTCTaGCCTGTGTCCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHGLGPF*PVSLAA
Trigger: GGCCGCCAAGGACACAGGGCAGAATGGGCCCAAGCC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACACTGGGGGCGCTGCTaGGGTCTCCTCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTHWGRC*GLLLLL
Trigger: GAGAAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCTCCACTGGGGGCGCTaGTGCGGTCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHLHWGR*CGLLLL
Trigger: AAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTGGAG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCTCGCTGCTTCAGCTaGTTCAGGTCCAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALARCFS*FRSSGF
Trigger: GAAGCCACTGGACCTGAAGCAGCTGAAGCAGCGAGC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTCCGGCTGCAGGTTTTaGGGTGGCGGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDSGCRF*GGGGAG
Trigger: CCCAGCCCCACCGCCACCGCAAAACCTGCAGCCGGA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCAGGTAGTCCTCCTGTaGCTCCACGTAGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTQVVLL*LHVGPR
Trigger: CCTCGGTCCTACGTGGAGGCACAGGAGGACTACCTG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGTGGGGGCGGAGGCGTaGCCTCCCGCTTTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREVGAEA*PPALGA
Trigger: AGCTCCTAAAGCGGGAGGGCACGCCTCCGCCCCCAC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCAGGGAGCGTACGTCGTaGTTTTTGGAGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVRERTS*FLEPVV
Trigger: CACCACTGGCTCCAAAAAGCACGACGTACGCTCCCT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCTTTCGGTCCTGGGATaGCTTGCTGGACGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLSVLG*LAGRKA
Trigger: AGCCTTTCGTCCAGCAAGGCATCCCAGGACCGAAAG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATCGGGCACGGTGCTGTaGGGGGACTTGGCGATCTCA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGSGTVL*GDLAIS
Trigger: TGAGATCGCCAAGTCCCCGCACAGCACCGTGCCCGA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCCAGGGGGATGTGGCTaGGATACAGGTCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNPGGCG*DTGPRH
Trigger: GTGGCGTGGACCTGTATCGCAGCCACATCCCCCTGG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACTGCGTCCAGAGGGATaGCGCGGGGTATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTLRPEG*RGVWRW
Trigger: CCACCTCCATACCCCGCGGCATCCCTCTGGACGCAG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCTCCAGATGGGTGCGTaGTCCACCGTCGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNLQMGA*STVVVD
Trigger: GTCCACCACGACGGTGGAGCACGCACCCATCTGGAG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGCTGGCGTGGTGAGGTaGGAGGTTCTTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGAGVVR*EVLRRG
Trigger: ACCCCTGCGAAGAACCTCGCACCTCACCACGCCAGC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGATGACCTCACTGATGTaGTGGGCCAGGGTGACCACC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALMTSLM*WARVTT
Trigger: GGTGGTCACCCTGGCCCAGCACATCAGTGAGGTCAT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDALAPS*PPVGTQ
Trigger: CTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGACTTGGCTTTTCGGCTaGTGGGTCTGCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLTWLFG*WVCQRP
Trigger: AGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGCGGCGTCCGGCGGTTaGAGTCTCCCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREAASGG*SLPPSA
Trigger: TGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGCGGCGTCCGGCGGTTaGAGTCTCCCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKAASGG*SLPPSA
Trigger: TGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGAATGGCGTGGAACCTaGGGACGAGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAEWRGT*GRGPVL
Trigger: GAGGACAGGCCCTCGTCCGCAGGTTCCACGCCATTC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWESVSY*EQSSGL
Trigger: CAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLLDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGCATCGAATTCATTCTaGCCAAGGAAGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPASNSF*PRKGGR
Trigger: CCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGGGGTTGTTCTCGATaGGCTCCACCTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALGGCSR*APPSSP
Trigger: GGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGCCCACCCTCTGCATaGGCTCCTGCAGCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGPPSA*APAARA
Trigger: AGCGCGAGCTGCAGGAGCGCATGCAGAGGGTGGGCC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404621.5
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATACATGGACAGCCCACTaGCCCGCTGGCCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHTWTAH*PAGPPS
Trigger: AGAGGGTGGGCCAGCGGGGCAGTGGGCTGTCCATGT...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCAAGTTCTTGGGATGCTaGATGAACTTCTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRKFLGC*MNFSRK
Trigger: CTTCCGGGAGAAGTTCATGCAGCATCCCAAGAACTT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCCGCCACCCATGAGTaGCTTTCTAATTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRAATHE*LSNYGL
Trigger: GAGGCCATAATTAGAAAGGCACTCATGGGTGGCGGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404621.5
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATGTTGTTGCTGCTGCTaGCTCTTGCCGCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGCCCCC*LLPRRR
Trigger: TCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCAGTTTTGCGGCCTTTaGAGGCCACAGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWQFCGL*RPQPPS
Trigger: AGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGTCTTCCCTGGCTGTTaGCAGTTTTGCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVVFPGC*QFCGLW
Trigger: CCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGAC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCTTTGCGTCTTCCCTaGCTGTTGGCAGTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPLRLP*LLAVLR
Trigger: CCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGAGCTCGGCGCTCTGCTaGGGGGTGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSSALC*GVMASS
Trigger: CGAGGAGGCCATCACCCCCCAGCAGAGCGCCGAGCT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTCTCATTCAGCTCCATaGAGGCCAGCTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALSHSAP*RPARRS
Trigger: AGAGCGCCGAGCTGGCCTCCATGGAGCTGAATGAGA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGGGTGGCTGGGGGCTTaGGCCCATTCTGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHGWLGA*AHSALC
Trigger: ACACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACGGGATGTCCTCCGGTaGTGGGGTGGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGRDVLR*WGGWPW
Trigger: CCAGGGCCACCCACCCCACCACCGGAGGACATCCCG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCTCCTTCTCCTCCTTaGGGACCACAGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTPPSPP*GPQEEV
Trigger: CACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACTCCCCCTCCTCCACTaGGGGCGCTGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLPLLH*GRCCGL
Trigger: GAGACCGCAGCAGCGCCCCCAGTGGAGGAGGGGGAG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGAGCTCTTGGCTGTGGTaGCCCTGCCGCTCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKSSWLW*PCRSRP
Trigger: AGGGCGGGAGCGGCAGGGCCACCACAGCCAAGAGCT...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTCTGGGGTGAGGCATTaGCCCGGGGGTCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASGVRH*PGGRQS
Trigger: CGACTGGCGACCCCCGGGCCAATGCCTCACCCCAGA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGAGGCGGGTTGGAGATaGTGGGTGGGCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREEAGWR*WVGAAG
Trigger: TCCTGCCGCGCCCACCCACCATCTCCAACCCGCCTC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCACATTCCTTGGGAGATaGCACCTATTTGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRTFLGR*HLFASR
Trigger: TCGAGAGGCAAATAGGTGCCATCTCCCAAGGAATGT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTCTGAGTACGGGACGTaGAGCTGGACCGACATTCCT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWSEYGT*SWTDIP
Trigger: AGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCCCAGCCTGGCCCCGTaGGGACAGCTGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREPSLAP*GQLLLL
Trigger: AAGCAGGAGCAGCTGTCCCCACGGGGCCAGGCTGGG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTACAGGACGTCAGCTaGCGTGCCGTGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTVQDVS*RAVGDG
Trigger: TCCATCACCCACGGCACGCCAGCTGACGTCCTGTAC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCTCCTTGGAGCACTaGGTCACAGACATGCCACCC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHSSLEH*VTDMPP
Trigger: GGGTGGCATGTCTGTGACCCAGTGCTCCAAGGAGGA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTGTCATAGGTGCGCTTaGGGGCGGCCGTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLACHRCA*GRPSHG
Trigger: CCCATGAGACGGCCGCCCCCAAGCGCACCTATGACA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGATGGACCCGCGGATGTaGTGCTGCTCTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALMDPRM*CCSLRW
Trigger: CCACCTCAAAGAGCAGCACCACATCCGCGGGTCCAT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACATGGACCCGCGGATGTaGTGCTGCTCTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHMDPRM*CCSLRW
Trigger: CCACCTCAAAGAGCAGCACCACATCCGCGGGTCCAT...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGCCACCAGGCCCTCATaGGCCGGCTTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTATRPS*AGFSFR
Trigger: CCTGAAGCTGAAGCCGGCCCATGAGGGCCTGGTGGC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGCGGGATCTCATGGATaGAGCGGCCCGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGAGSHG*SGPPPS
Trigger: TGAAGGAGGCGGGCCGCTCCATCCATGAGATCCCGC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGTACGTCGTGCTTTTTaGAGCCAGTGGTGGACGCGC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALVRRAF*SQWWTR
Trigger: GCGCGTCCACCACTGGCTCCAAAAAGCACGACGTAC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGCTGCTGGCGGTCCCTaGCCGGCTCTTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQAAGGP*PALQAL
Trigger: GAGAGCCTGAAGAGCCGGCCAGGGACCGCCAGCAGC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGCTGCTGGCGGTCCCTaGCCGGCTCTTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKAAGGP*PALQAL
Trigger: GAGAGCCTGAAGAGCCGGCCAGGGACCGCCAGCAGC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCACGGGCGAACCTCGTaGGAGGTGGCCGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKHGRTS*EVAGKG
Trigger: CCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGTCAGCTTTCGGTCCTaGGATGCCTTGCTGGACGAA +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLVSFRS*DALLDE
Trigger: TTCGTCCAGCAAGGCATCCCAGGACCGAAAGCTGAC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTGCTGTGCGGGGACTTaGCGATCTCACGAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLACCAGT*RSHEAS
Trigger: CGACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTGCTGTGCGGGGACTTaGCGATCTCACGAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNCCAGT*RSHEAS
Trigger: CGACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGAGATGGGGTGTGGGTaGTGCTCGGGCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTEMGCG*CSGTVL
Trigger: CAGCACCGTGCCCGAGCACCACCCACACCCCATCTC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGGCGAGATGGGGTGTaGGTGGTGCTCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREGRDGV*VVLGHG
Trigger: ACCGTGCCCGAGCACCACCCACACCCCATCTCGCCC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGGCGAGATGGGGTGTaGGTGGTGCTCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGRDGV*VVLGHG
Trigger: ACCGTGCCCGAGCACCACCCACACCCCATCTCGCCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGCTCATAGGGCGAGATaGGGTGTGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAAHRAR*GVGGAR
Trigger: CCGAGCACCACCCACACCCCATCTCGCCCTATGAGC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAAGCATATCAGCTCGCTaGGCCATGGCGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSISAR*AMAVAA
Trigger: CGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCT...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGAGGCAAGGCGGTCCATaGCGGTGGCTGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKRQGGP*RWLGCL
Trigger: CAGGCACCCCAGCCACCGCCATGGACCGCCTTGCCT...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGAGGCAAGGCGGTCCATaGCGGTGGCTGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGARQGGP*RWLGCL
Trigger: CAGGCACCCCAGCCACCGCCATGGACCGCCTTGCCT...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTTTTGTCAAGTGTGTTaGACCTCCTGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQFCQVC*TSWGEW
Trigger: CCACTCTCCCCAGGAGGTCCAACACACTTGACAAAA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCGAGGACGTGGTGGTTaGTTTTGTCAAGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGRGRGG*FCQVCW
Trigger: CCAACACACTTGACAAAACCAACCACCACGTCCTCG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQARTRT*WLVLSS
Trigger: ACTTGACAAAACCAACCACCACGTCCTCGTCCGAGC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGAGTGCTGGTGGGCATaGGAGTGGGAGGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGECWWA*EWEAGR
Trigger: CCGCCCCGCCTCCCACTCCCATGCCCACCAGCACTC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTACACTGGGTCTCTGCTaGAGGGCATCCTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTTLGLC*RASWVR
Trigger: TCGGACCCAGGATGCCCTCCAGCAGAGACCCAGTGT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGTGAGGAGGTGGAGGTaGACCTCAGGACCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTVRRWR*TSGPWA
Trigger: CGCCCACGGTCCTGAGGTCCACCTCCACCTCCTCAC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGCAGTGGGTGGCAGGTaGGAATGTGGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREAVGGR*ECGSRA
Trigger: CGCCCGGCTGCCACATTCCCACCTGCCACCCACTGC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAAGCGGGCTGGGGGCTTaGCGAGGAAGGCATGGCCGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSGLGA*RGRHGR
Trigger: CCGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGGTGCGGGCGATGGTaGCGTGGCCAGAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGCGRW*RGQRQE
Trigger: CTCCTGTCTCTGGCCACGCCACCATCGCCCGCACCC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCGGAGTTCCAGTTCCTaGATGGAAAAGGGTTTACTT +
Preference number: 4 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRSSSS*MEKGLL
Trigger: AAGTAAACCCTTTTCCATCCAGGAACTGGAACTCCG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCGGAGTTCCAGTTCCTaGATGGAAAAGGGTTTACTT +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACRSSSS*MEKGLL
Trigger: AAGTAAACCCTTTTCCATCCAGGAACTGGAACTCCG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGGAGCCCCTTGTCGTaGGTCAGACTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGSPLS*VRLGEL
Trigger: GAGCTCACCCAGTCTGACCCACGACAAGGGGCTCCC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAGCTCCCCCTCCAGGTaGCTCTTGTCGAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSSPSR*LLSSSS
Trigger: GGAAGAGCTCGACAAGAGCCACCTGGAGGGGGAGCT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCAGGACGGGGCAGCTaGCCCCAGGGAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPGRGS*PQGRSR
Trigger: TCTACTCCTTCCCTGGGGCCAGCTGCCCCGTCCTGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGTAGAGGTCACTGGGTaGGCGGCGGAGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHVEVTG*AAEVQD
Trigger: GTCCTGGACCTCCGCCGCCCACCCAGTGACCTCTAC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGAGGTAGAGGTCACTaGGTGGGCGGCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTGGRGH*VGGGGP
Trigger: TGGACCTCCGCCGCCCACCCAGTGACCTCTACCTCC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCGTCTTGTTTGGCTCTaGAGACCTCTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWRLVWL*RPLAPF
Trigger: GAAGGGGGCAAGAGGTCTCCAGAGCCAAACAAGACG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCATCTCCGTCCCAGGCTaGCTGATATTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGISVPG*LILYSG
Trigger: GCCTGAATACAATATCAGCCAGCCTGGGACGGAGAT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGATCTCCGTCCCAGGCTaGCTGATATTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQISVPG*LILYSG
Trigger: GCCTGAATACAATATCAGCCAGCCTGGGACGGAGAT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGTCTGCCAGAGACCTTaGCCTTCCCGCCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTVCQRP*PSRRHL
Trigger: CAGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGAC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATGTAGGGGAATGGCGTaGAACCTGCGGACGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGCRGMA*NLRTRA
Trigger: GGCCCTCGTCCGCAGGTTCCACGCCATTCCCCTACA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGCAGAGCAGTGGCTTaGGCTCCTCGTCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLASRAVA*APRPRR
Trigger: ACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLALRAEQ*LGLLVP
Trigger: TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCAGGGGCTCCTTCCTTaGTTGGGGGAGTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHQGLLP*LGESAA
Trigger: GGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCTGGCCGCCTGCGTGTaGCTGCCACACGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRILAACV*LPHACR
Trigger: ACGGCAGGCGTGTGGCAGCCACACGCAGGCGGCCAG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTGGCGTGGAGGTGCGTaGTCATCCTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTWRGGA*SSCFGS
Trigger: GGACCCAAAGCAGGATGACCACGCACCTCCACGCCA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACAQFRL*FQMHSG
Trigger: CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAQFRL*FQMHSG
Trigger: CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGCTGGGGCAGTCTGTaGGGACCGGAACGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGWGSL*GPERAH
Trigger: GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTCCAGCAATCTCGTTaGCTGGGGCAGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHFQQSR*LGQSVG
Trigger: CCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGACCACCCTGCGCAGATaGCGGCCACAGAATACGCAT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALTTLRR*RPQNTH
Trigger: ATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTGGATCCCGACATGGTaGTGGGGGTCGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQWIPTW*WGSAGS
Trigger: GCTCCCCGCCGACCCCCACCACCATGTCGGGATCCA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGTGTGGATCCCGACATaGTGGTGGGGGTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQVWIPT*WWGSAG
Trigger: CCCCGCCGACCCCCACCACCATGTCGGGATCCACAC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCTCCGCCGCTGGGGCTaGATGATGGAGCCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRILRRWG*MMEPGD
Trigger: GTCGCCCGGCTCCATCATCCAGCCCCAGCGGCGGAG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCGGGCAGGTATGAGTaGGACTCTGGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSGRYE*DSGRRW
Trigger: CCACCTGCGGCCAGAGTCCCACTCATACCTGCCCGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATGCGGGCGGCCGACATaGACAGCCCACTGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGCGRPT*TAHCPA
Trigger: AGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAACTTGATGCGCTGCTaGTCAGCGTCGTACAGCATG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPNLMRC*SASYSM
Trigger: CATGCTGTACGACGCTGACCAGCAGCGCATCAAGTT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTTCCTCTCCAGGAATaGTGCGATCAGGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRLPLQE*CDQAKV
Trigger: AACTTTGGCCTGATCGCATCATTCCTGGAGAGGAAG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTCGTTGTCCTCCCCTaGGGTGTCGTCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTVVVLP*GVVCLL
Trigger: GAGAAGACAGACGACACCTCAGGGGAGGACAACGAC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACCGTGCACTCGCTCTTaGCGGGCTCCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGPCTRS*RAPRPS
Trigger: GGAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAAGCGTAGGAGAAGGCTaGGGGGTCCGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSVGEG*GVRGMR
Trigger: CCGCATGCCCCGGACCCCTCAGCCTTCTCCTACGCT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGGCCTTGGCATGCTCTaGGTACGGGACGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHGLGML*VRDVEL
Trigger: CAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCTGCTTCACTCCGCTaGAGGGTGCCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTPASLR*RVPAFW
Trigger: CCAAAAAGCTGGCACCCTTCAGCGGAGTGAAGCAGG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTGGAGCCGCGGTATGTaGTGGCGCTGTCCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQWSRGM*WRCPRA
Trigger: TGCCCTCGGACAGCGCCATCACATACCGCGGCTCCA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGAGGGATCCCTTGTGTaGTGGACCCGCGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGEGSLV*WTRGCG
Trigger: ACCACATCCGCGGGTCCATCACACAAGGGATCCCTC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCTTGGGACAGGTCGATaGTGCCTCGGGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKLGTGR*CLGDPQ
Trigger: CTGCGGGTCCCCGAGGCATCATCGACCTGTCCCAAG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGAAAAGGGTTTACTTTaGGTCTTTTCCCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPEKGLL*VFSRCG
Trigger: CCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTGTGCTGGGCCAGGGTaGCCACCCGCTGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQCAGPG*PPAGDL
Trigger: AAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCCGCCTGCAGCCGCATaGTCAGGGGGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAPPAAA*SGGCRG
Trigger: TCCCCTACAACCCCCTGATCATGCGGCTGCAGGCGG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCCTGCACACGCCTCTTaGACGGTAAGCAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWPAHAS*TVSRDQ
Trigger: TTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTCCTGCACACGCCTCTTaGACGGTAAGCAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLPAHAS*TVSRDQ
Trigger: TTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGG...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACCTTGGTCCTGCGAGTaGTGGGGTCACCGACTGTCG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTPWSCE*WGHRLS
Trigger: CGACAGTCGGTGACCCCATCACTCGCAGGACCAAGG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAACGACGTGTGTAAATaGCAGAATACCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSANDVCK*QNTTTL
Trigger: CAGGGTGGTGGTATTCTGTCATTTACACACGTCGTT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGCTTGCTTTCAATaGACTCCATCTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRGACFQ*TPSLTS
Trigger: GGAAGTCAGAGATGGAGTTCATTGAAAGCAAGCGCC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGCTACGGTCCTTGGTaGGGTCTTCAGATCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGYGPW*GLQIPQ
Trigger: CTGCGGGATCTGAAGACCTCACCAAGGACCGTAGCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACTCGATGGGCGGCGGTaGCACGGGCTTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLDGRR*HGLLRL
Trigger: GAGCCTGAGAAGCCCGTGTCACCGCCGCCCATCGAG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACTTTCTCCTCCTGGCTaGTGCGGGGCATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTLSPPG*CGAWAA
Trigger: AGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCTGTTGGCAGTTTTaGGGCCTTTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTGCWQF*GLWRPQ
Trigger: CTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGATCTTCAGCTTGTGCTaGTGCAAGATCTCATCGAGG +
Preference number: 4 (lower is better)
Translates to: DRACVHLSRALSGMGGGGIFSLC*CKISSR
Trigger: CCTCGATGAGATCTTGCAGCAGCACAAGCTGAAGAT...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTATCTTCAGCTTGTGCTaGTGCAAGATCTCATCGAGG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAIFSLC*CKISSR
Trigger: CCTCGATGAGATCTTGCAGCAGCACAAGCTGAAGAT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCCATCTTCAGCTTGTaGTGCTGCAAGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSIFSL*CCKISS
Trigger: CGATGAGATCTTGCAGCAGCACAAGCTGAAGATGGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGGCTTGGGCCCATTCTaGCCTGTGTCCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQGLGPF*PVSLAA
Trigger: GGCCGCCAAGGACACAGGGCAGAATGGGCCCAAGCC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGCTTGGGCCCATTCTaGCCTGTGTCCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREGLGPF*PVSLAA
Trigger: GGCCGCCAAGGACACAGGGCAGAATGGGCCCAAGCC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTGGCTGTGGTGGCCCTaGCGCTCCCGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIWLWWP*RSRPPS
Trigger: AGAAGGAGGGCGGGAGCGGCAGGGCCACCACAGCCA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACATGGCAGCCGCTCGCTaGTTCAGCTGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNMAAAR*FSCFRS
Trigger: GGACCTGAAGCAGCTGAAGCAGCGAGCGGCTGCCAT...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGCGTCGCTCTCCGGCTaGAGGTTTTGCGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDASLSG*RFCGGG
Trigger: ACCGCCACCGCAAAACCTGCAGCCGGAGAGCGACGC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCTGCGTCCAGAGGGATaGCGCGGGGTATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRELRPEG*RGVWRW
Trigger: CCACCTCCATACCCCGCGGCATCCCTCTGGACGCAG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCGCAGCGTAGTTGAGTaGCAGCGAGGACTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQRSVVE*QRGLAG
Trigger: CCCCGCGAGTCCTCGCTGGCACTCAACTACGCTGCG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAAGCACACTGGGTCTCTaGTGGAGGGCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGSTLGL*WRASWV
Trigger: GACCCAGGATGCCCTCCAGCAGAGACCCAGTGTGCT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCTTCGGGGCTGTAGCTaGTGCCGTGGTAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLALRGCS*CRGNPE
Trigger: CTCTGGGTTACCACGGCAGCAGCTACAGCCCCGAAG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCGAGCTCTTCCAGGTaGTTGGGGAGCCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSSSSR*LGSPLS
Trigger: CGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTTCGGCTGCTGGGTCTaGCAGAGACCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNFGCWV*QRPWPS
Trigger: GGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATTCGGCTGCTGGGTCTaGCAGAGACCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGFGCWV*QRPWPS
Trigger: GGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGACTTGGCTTTTCGGCTaGTGGGTCTGCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARTWLFG*WVCQRP
Trigger: AGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGT...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAACTTGGCTTTTCGGCTaGTGGGTCTGCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: VGECLVLRAEQWLGLLVPTWLFG*WVCQRP
Trigger: AGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGT...TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR GCA 90 bp CTGTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSESVSYCEQSSGLGSSSESVSY*EQSSGL
Trigger: CAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTC...GGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAAGTCGGCAGCCGCCCTaGTCCTGCAGGGCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSRQPP*SCRAVP
Trigger: AGGAACGGCCCTGCAGGAGCAGGGCGGCTGCCGACT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACCCCTGAGTAAGGTCTaGACAGGGCCAGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGPLSKV*TGPARG
Trigger: GCCCCGGGCTGGCCCTGTGCAGACCTTACTCAGGGG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGCAGTGGCGTGGAGGTaGGTGGTCATCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGAVAWR*VVILLW
Trigger: CCAAAGCAGGATGACCACGCACCTCCACGCCACTGC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWDFGSK*IRGRQW
Trigger: CCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGAGTACTCGCGCACCTTaGTCTCCTTGGCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESTRAP*SPWPAA
Trigger: GGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTTCTCCAGGTTCTCCTaGTCTGAGAGGCCATCGATG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLFSRFS*SERPSM
Trigger: CATCGATGGCCTCTCAGAGCAGGAGAACCTGGAGAA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGGTCTCCTTCTCCTaGTCACTCCACATGTTCATG +
Preference number: 4 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAKVSFS*SLHMFM
Trigger: CATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTT...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCAGTTTTGCGGCCTTTaGAGGCCACAGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALQFCGL*RPQPPS
Trigger: AGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCCTTTGCGTCTTCCCTaGCTGTTGGCAGTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHPLRLP*LLAVLR
Trigger: CCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTCTCATTCAGCTCCATaGAGGCCAGCTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSHSAP*RPARRS
Trigger: AGAGCGCCGAGCTGGCCTCCATGGAGCTGAATGAGA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGTTGTTGACAGTGGCTaGGCCACTGCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALVVDSG*ATAFPS
Trigger: AGAGGGGAATGCAGTGGCCCAGCCACTGTCAACAAC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACTGGAGTCGCTGTCCTaGGGGGCGCCCGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLESLS*GAPELL
Trigger: CAAGAGCTCGGGCGCCCCCCAGGACAGCGACTCCAG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATCTGGGGTGAGGCATTaGCCCGGGGGTCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSGVRH*PGGRQS
Trigger: CGACTGGCGACCCCCGGGCCAATGCCTCACCCCAGA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTCCCCAGGCAGCTTCTaGGCCTCGGCTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESPGSF*ASAAKA
Trigger: AGCCTTCGCAGCCGAGGCCCAGAAGCTGCCTGGGGA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGAGGCGGGTTGGAGATaGTGGGTGGGCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIEAGWR*WVGAAG
Trigger: TCCTGCCGCGCCCACCCACCATCTCCAACCCGCCTC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGCCTCTCGAGGACGCTaGGGTGCTTGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHASRGR*GAWQRR
Trigger: TCTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTGGACCGACATTCCTTaGGAGATGGCACCTATTTGC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQWTDIP*EMAPIC
Trigger: GCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTCTGAGTACGGGACGTaGAGCTGGACCGACATTCCT +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARSEYGT*SWTDIP
Trigger: AGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGGGTGCCAGCTTTTTaGGGTCCATGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLARVPAF*GPWAGA
Trigger: TGCCCCTGCCCATGGACCCCAAAAAGCTGGCACCCT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATCGCGCGGGATCTCATaGATGGAGCGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSRGIS*MERPAS
Trigger: GGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGCTTTTTGGAGCCAGTaGTGGACGCGCCGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAAFWSQ*WTRRCR
Trigger: ACGACACCGGCGCGTCCACCACTGGCTCCAAAAAGC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGAGATGGGGTGTGGGTaGTGCTCGGGCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAEMGCG*CSGTVL
Trigger: CAGCACCGTGCCCGAGCACCACCCACACCCCATCTC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGAGATGGGGTGTGGGTaGTGCTCGGGCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQEMGCG*CSGTVL
Trigger: CAGCACCGTGCCCGAGCACCACCCACACCCCATCTC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGGCGAGATGGGGTGTaGGTGGTGCTCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGGRDGV*VVLGHG
Trigger: ACCGTGCCCGAGCACCACCCACACCCCATCTCGCCC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAAGGCCAGGGGGATGTaGCTGCGATACAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAKARGM*LRYRST
Trigger: CGTGGACCTGTATCGCAGCCACATCCCCCTGGCCTT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAAAGGCCAGGGGGATGTaGCTGCGATACAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGKARGM*LRYRST
Trigger: CGTGGACCTGTATCGCAGCCACATCCCCCTGGCCTT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGAGCATATCAGCTCGCTaGGCCATGGCGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSISAR*AMAVAA
Trigger: CGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGAGCACAGGCAGGTGTaGCACTTGGGACAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTEHRQV*HLGQVD
Trigger: ATCGACCTGTCCCAAGTGCCACACCTGCCTGTGCTC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTTTTGTCAAGTGTGTTaGACCTCCTGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPFCQVC*TSWGEW
Trigger: CCACTCTCCCCAGGAGGTCCAACACACTTGACAAAA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTTTTGTCAAGTGTGTTaGACCTCCTGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQFCQVC*TSWGEW
Trigger: CCACTCTCCCCAGGAGGTCCAACACACTTGACAAAA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGT +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWARTRT*WLVLSS
Trigger: ACTTGACAAAACCAACCACCACGTCCTCGTCCGAGC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGATGGGCGAGTGCTGGTaGGCATGGGAGTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREMGECW*AWEWEA
Trigger: CGCCTCCCACTCCCATGCCCACCAGCACTCGCCCAT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGAGATGGGCGAGTGCTaGTGGGCATGGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTEMGEC*WAWEWE
Trigger: CTCCCACTCCCATGCCCACCAGCACTCGCCCATCTC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGAGATGGGCGAGTGCTaGTGGGCATGGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHEMGEC*WAWEWE
Trigger: CTCCCACTCCCATGCCCACCAGCACTCGCCCATCTC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGGTCCGAGGGGAGATaGGCGAGTGCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGSEGR*ASAGGH
Trigger: ATGCCCACCAGCACTCGCCCATCTCCCCTCGGACCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTGTTGTGAAGCACACTaGGTCTCTGCTGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLCCEAH*VSAGGH
Trigger: ATGCCCTCCAGCAGAGACCCAGTGTGCTTCACAACA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGTTGTGAAGCACACTaGGTCTCTGCTGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVCCEAH*VSAGGH
Trigger: ATGCCCTCCAGCAGAGACCCAGTGTGCTTCACAACA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTGGACCTCAGGACCGTaGGCGTGCTGGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQWTSGP*ACWAPQ
Trigger: CTGTGGAGCCCAGCACGCCCACGGTCCTGAGGTCCA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGACCTCAGGACCGTaGGCGTGCTGGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAWTSGP*ACWAPQ
Trigger: CTGTGGAGCCCAGCACGCCCACGGTCCTGAGGTCCA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACCAGTGGGCAGTGGGTaGCAGGTGGGAATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTPVGSG*QVGMWQ
Trigger: CTGCCACATTCCCACCTGCCACCCACTGCCCACTGG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCAGTGGGCAGTGGGTaGCAGGTGGGAATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPVGSG*QVGMWQ
Trigger: CTGCCACATTCCCACCTGCCACCCACTGCCCACTGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTTGGCGAGGAAGGCATaGCCGGTGTCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDLARKA*PVSARG
Trigger: GCCCCGAGCAGACACCGGCCATGCCTTCCTCGCCAA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTCTGGAGCAGCGGGCTaGACGAGGGCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSGAAG*TRAGSQ
Trigger: CTGAGAGCCAGCCCTCGTCCAGCCCGCTGCTCCAGA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAACCTCACTGATGTGCTaGGCCAGGGTGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTTSLMC*ARVTTR
Trigger: GCGGGTGGTCACCCTGGCCCAGCACATCAGTGAGGT...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGTAGAGGTCACTGGGTaGGCGGCGGAGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREVEVTG*AAEVQD
Trigger: GTCCTGGACCTCCGCCGCCCACCCAGTGACCTCTAC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGTAGAGGTCACTGGGTaGGCGGCGGAGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDVEVTG*AAEVQD
Trigger: GTCCTGGACCTCCGCCGCCCACCCAGTGACCTCTAC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGAGGTAGAGGTCACTaGGTGGGCGGCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGGRGH*VGGGGP
Trigger: TGGACCTCCGCCGCCCACCCAGTGACCTCTACCTCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCGTCATGCCCTCCGGTaGGGACACAGGTTCAATACC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTRHALR*GHRFNT
Trigger: GGTATTGAACCTGTGTCCCCACCGGAGGGCATGACG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTGGAGCCCATCCTGCTaGGCTCCGTCTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNWSPSC*APSVPH
Trigger: ATGGGGAACAGACGGAGCCCAGCAGGATGGGCTCCA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGCCCCATGTTGGTGCTaGCATGTTCCTGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAAPCWC*HVPAPP
Trigger: AGGCGGTGCAGGAACATGCCAGCACCAACATGGGGC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGCGAGGTGAGTGTGTaGTCACTCCGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGEVSV*SLRPSA
Trigger: TGCTGACGGACGGAGTGACCACACACTCACCTCGCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGTCTGCCAGAGACCTTaGCCTTCCCGCCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDVCQRP*PSRRHL
Trigger: CAGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGAC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATAGCAGAGCAGTGGCTTaGGCTCCTCGTCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSRAVA*APRPRR
Trigger: ACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCT...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHLRAEQ*LGLLVP
Trigger: TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGGCTCCTTCCTTGGTTaGGGGAGTCGGCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIGSFLG*GSRQPP
Trigger: GGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGACGGACAGATGGATaGAGGCGCAGGCGGACTCAG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTGRTDG*RRRRTQ
Trigger: CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGAGCGCACTGGGGGCTaGACAGGGCCTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGERTGG*TGPASI
Trigger: GATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCGTTCATTCCCGGGCTaGAACTCAGACAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTRSFPG*NSDSRE
Trigger: CTCCCTGCTGTCTGAGTTCCAGCCCGGGAATGAACG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGACTCTGGCCGCAGGTaGAGCTCCTGGGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTDSGRR*SSWDRS
Trigger: TGAACGGTCCCAGGAGCTCCACCTGCGGCCAGAGTC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCTCCTTGGACAGCCGTaGCGGCACCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQLLGQP*RHQLQL
Trigger: GAGCTGGAGCTGGTGCCGCCACGGCTGTCCAAGGAG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTAACTTGATGCGCTGCTaGTCAGCGTCGTACAGCATG +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLNLMRC*SASYSM
Trigger: CATGCTGTACGACGCTGACCAGCAGCGCATCAAGTT...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCACATGTTCATGACCTaGCGGTCTTTGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQHMFMT*RSLYTF
Trigger: GAAGGTGTACAAAGACCGCCAGGTCATGAACATGTG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTTGGCGGCCTCAGTGTaGGGAGAGGGGATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKLAASV*GEGMLS
Trigger: CGAGAGCATCCCCTCTCCTCACACTGAGGCCGCCAA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCCTGCTTCACTCCGCTaGAGGGTGCCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAPASLR*RVPAFW
Trigger: CCAAAAAGCTGGCACCCTTCAGCGGAGTGAAGCAGG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTGGAGCCGCGGTATGTaGTGGCGCTGTCCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIWSRGM*WRCPRA
Trigger: TGCCCTCGGACAGCGCCATCACATACCGCGGCTCCA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTCCGGGCTGGCGTGGTaGGGTGCGAGGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRISGLAW*GARFFA
Trigger: TGCGAAGAACCTCGCACCTCACCACGCCAGCCCGGA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATGTGCTGGGCCAGGGTaGCCACCCGCTGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGCAGPG*PPAGDL
Trigger: AAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTCTCGGTCAGCTTGCTaGAGAAGGCTGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSRSAC*RRLAAG
Trigger: GCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCGCCACCTGGCGAGGTaGGTGTGTGGTCACTCCGTC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIRHLAR*VCGHSV
Trigger: GACGGAGTGACCACACACTCACCTCGCCAGGTGGCG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
CDS-3UTR TCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCCTTGGTCCTGCGAGTaGTGGGGTCACCGACTGTCG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREPWSCE*WGHRLS
Trigger: CGACAGTCGGTGACCCCATCACTCGCAGGACCAAGG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAATGAACTCCATCTCTaGCTTCCCCAGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTNELHL*LPQLGQ
Trigger: CTGCCCGAGCTGGGGAAGTCAGAGATGGAGTTCATT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGCCATCGATGATCTCTaGCACCTCGTGCTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHAIDDL*HLVLAA
Trigger: CGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTCACTCCACATGTTCATaGCCTGGCGGTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLHSTCS*PGGLCT
Trigger: TGTACAAAGACCGCCAGGTCATGAACATGTGGAGTG...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCACTCCACATGTTCATaGCCTGGCGGTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLHSTCS*PGGLCT
Trigger: TGTACAAAGACCGCCAGGTCATGAACATGTGGAGTG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTGCTGCTGTTGTTGCTaGTGCTGGCTCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHCCCCC*CWLLPR
Trigger: CCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCTTTCTCCTCCTGGCTaGTGCGGGGCATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQLSPPG*CGAWAA
Trigger: AGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTCCATCTTCAGCTTGTaGTGCTGCAAGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRSIFSL*CCKISS
Trigger: CGATGAGATCTTGCAGCAGCACAAGCTGAAGATGGA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCAGTGGCTGGGCCACTaGATTCCCCTCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAQWLGH*IPLWAP
Trigger: AGGTGCCCAGAGGGGAATGCAGTGGCCCAGCCACTG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCAGTGGCTGGGCCACTaGATTCCCCTCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKQWLGH*IPLWAP
Trigger: AGGTGCCCAGAGGGGAATGCAGTGGCCCAGCCACTG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCACTGGGGGCGCTGCTaGGGTCTCCTCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIHWGRC*GLLLLL
Trigger: GAGAAGGAGGAGGAGACCGCAGCAGCGCCCCCAGTG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGCCCTCCTTCTTCTCTaGCTTGAGCGCCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIALLLL*LERPLG
Trigger: GCCGAGGGGGCGCTCAAGGCAGAGAAGAAGGAGGGC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNEMAPI*LSRTLG
Trigger: CCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGTCCTGAGCTGCTTCTaGCGTCCTCCTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGVLSCF*RPPWST
Trigger: AGTGCTCCAAGGAGGACGGCAGAAGCAGCTCAGGAC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCTGAGGAGATGGCTCTaGCCACGCGGCCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKLRRWL*PRGPPS
Trigger: TGATGGAGGGCCGCGTGGGCAGAGCCATCTCCTCAG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGATCACATCCAGCGGGTaGACGGGTGGGAACGTCCGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREITSSG*TGGNVR
Trigger: CCGGACGTTCCCACCCGTGCACCCGCTGGATGTGAT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGTGGCCGGCAAAGGGTaGCCCGTGGTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREVAGKG*PVVLIG
Trigger: ACCTATGAGGACCACGGGGCACCCTTTGCCGGCCAC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTCGGGCACGGTGCTGTaGGGGGACTTGGCGATCTCA +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSGTVL*GDLAIS
Trigger: TGAGATCGCCAAGTCCCCGCACAGCACCGTGCCCGA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTCATTGATGATGGTCTaGCGGTTCTCCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLASLMMV*RFSSAA
Trigger: GGCGGCGCTGGAGAACCGGCAGACCATCATCAATGA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAAGCACACTGGGTCTCTaGTGGAGGGCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSTLGL*WRASWV
Trigger: GACCCAGGATGCCCTCCAGCAGAGACCCAGTGTGCT...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCTTCGGGGCTGTAGCTaGTGCCGTGGTAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHLRGCS*CRGNPE
Trigger: CTCTGGGTTACCACGGCAGCAGCTACAGCCCCGAAG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTCGAGCTCTTCCAGGTaGTTGGGGAGCCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSSSSR*LGSPLS
Trigger: CGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATCGAGCTCTTCCAGGTaGTTGGGGAGCCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSSSSR*LGSPLS
Trigger: CGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATG +
Preference number: 4 (lower is better)
Translates to: GLLPWLGESAAALLLQGRFLLIS*FLDLTM
Trigger: CATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGAATGGCGTGGAACCTaGGGACGAGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQEWRGT*GRGPVL
Trigger: GAGGACAGGCCCTCGTCCGCAGGTTCCACGCCATTC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTESVSY*EQSSGL
Trigger: CAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALDFGSK*IRGRQW
Trigger: CCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTTCCAGAATCCGATGTaGAGCTTCAGCCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLFQNPM*SFSLLP
Trigger: CGGAAGAAGGCTGAAGCTGCACATCGGATTCTGGAA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCCAAAGTTCTTGGGATaGTGCATGAACTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWPKFLG*CMNFSR
Trigger: CCGGGAGAAGTTCATGCAGCATCCCAAGAACTTTGG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGATGGAGCTGGCTGTAGCAACTGCTGGCTaGCTGCGTTTTCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RDWAFYPRPRVRDLMELAVATAG*LRFLFP
Trigger: AGGGAAAAGAAAACGCAGGCAGCCAGCAGTTGCTAC...AGCCAGCTCCATCAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCTCATTCAGCTCCATaGAGGCCAGCTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSHSAP*RPARRS
Trigger: AGAGCGCCGAGCTGGCCTCCATGGAGCTGAATGAGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATACTGCGACACAGTCTTaGAGCCCACCATCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHTATQS*SPPSGR
Trigger: TCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGT...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGGGTGGCTGGGGGCTTaGGCCCATTCTGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIGWLGA*AHSALC
Trigger: ACACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTCCTTCTCCTCCTTaGGGACCACAGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPPSPP*GPQEEV
Trigger: CACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGAGGTCCAGTGGCTTCTaGGGTGAGGCATTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQRSSGF*GEALAR
Trigger: CCGGGCCAATGCCTCACCCCAGAAGCCACTGGACCT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGCCTCTCGAGGACGCTaGGGTGCTTGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAASRGR*GAWQRR
Trigger: TCTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGCCTCTCGAGGACGCTaGGGTGCTTGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREASRGR*GAWQRR
Trigger: TCTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTACGGGACGTGGAGCTaGACCGACATTCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNYGTWS*TDIPWE
Trigger: CTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGTACAGGACGTCAGCTaGCGTGCCGTGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHVQDVS*RAVGDG
Trigger: TCCATCACCCACGGCACGCCAGCTGACGTCCTGTAC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTATGGACCCGCGGATGTaGTGCTGCTCTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAMDPRM*CCSLRW
Trigger: CCACCTCAAAGAGCAGCACCACATCCGCGGGTCCAT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTGCTGTGCGGGGACTTaGCGATCTCACGAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKCCAGT*RSHEAS
Trigger: CGACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTGCTGTGCGGGGACTTaGCGATCTCACGAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRECCAGT*RSHEAS
Trigger: CGACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGAGATGGGGTGTGGGTaGTGCTCGGGCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIEMGCG*CSGTVL
Trigger: CAGCACCGTGCCCGAGCACCACCCACACCCCATCTC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGCTCATAGGGCGAGATaGGGTGTGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAAHRAR*GVGGAR
Trigger: CCGAGCACCACCCACACCCCATCTCGCCCTATGAGC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGCGGATGAGGTAGGGTaGGTACAGGTGCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTADEVG*VQVRVG
Trigger: ACCTACCCGCACCTGTACCCACCCTACCTCATCCGC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGAGCACAGGCAGGTGTaGCACTTGGGACAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGEHRQV*HLGQVD
Trigger: ATCGACCTGTCCCAAGTGCCACACCTGCCTGTGCTC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCGAGGACGTGGTGGTTaGTTTTGTCAAGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLRGRGG*FCQVCW
Trigger: CCAACACACTTGACAAAACCAACCACCACGTCCTCG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATGGACCTCAGGACCGTaGGCGTGCTGGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGWTSGP*ACWAPQ
Trigger: CTGTGGAGCCCAGCACGCCCACGGTCCTGAGGTCCA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCCAGTGGGCAGTGGGTaGCAGGTGGGAATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQPVGSG*QVGMWQ
Trigger: CTGCCACATTCCCACCTGCCACCCACTGCCCACTGG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTTGGCGAGGAAGGCATaGCCGGTGTCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRILARKA*PVSARG
Trigger: GCCCCGAGCAGACACCGGCCATGCCTTCCTCGCCAA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGGAGCCCCTTGTCGTaGGTCAGACTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGSPLS*VRLGEL
Trigger: GAGCTCACCCAGTCTGACCCACGACAAGGGGCTCCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGGAGCCCCTTGTCGTaGGTCAGACTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGSPLS*VRLGEL
Trigger: GAGCTCACCCAGTCTGACCCACGACAAGGGGCTCCC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGCTCTTCCAGGTGCTTaGGGAGCCCCTTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQALPGA*GAPCRG
Trigger: CCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGTGACCTTTGACCCCTaGGGCGGTCTGGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIVTFDP*GGLEQR
Trigger: CCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCAC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGACCTCACTGATGTGCTaGGCCAGGGTGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRETSLMC*ARVTTR
Trigger: GCGGGTGGTCACCCTGGCCCAGCACATCAGTGAGGT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGTAGAGGTCACTGGGTaGGCGGCGGAGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGVEVTG*AAEVQD
Trigger: GTCCTGGACCTCCGCCGCCCACCCAGTGACCTCTAC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGACCGACGTCTTGTTTaGCTCTGGAGACCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTDRRLV*LWRPLA
Trigger: GGCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCGTCATGCCCTCCGGTaGGGACACAGGTTCAATACC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLARHALR*GHRFNT
Trigger: GGTATTGAACCTGTGTCCCCACCGGAGGGCATGACG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTGTTGCCTGGAGACTTaGAGCCCATCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLACCLET*SPSCWA
Trigger: AGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTATCTCCGTCCCAGGCTaGCTGATATTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLISVPG*LILYSG
Trigger: GCCTGAATACAATATCAGCCAGCCTGGGACGGAGAT...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGATCTCCGTCCCAGGCTaGCTGATATTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLISVPG*LILYSG
Trigger: GCCTGAATACAATATCAGCCAGCCTGGGACGGAGAT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGCCCCATGTTGGTGCTaGCATGTTCCTGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHAPCWC*HVPAPP
Trigger: AGGCGGTGCAGGAACATGCCAGCACCAACATGGGGC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCCTCCAGCCCCATGTTaGTGCTGGCATGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNPPAPC*CWHVPA
Trigger: TGCAGGAACATGCCAGCACCAACATGGGGCTGGAGG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTGGCTTTTCGGCTGCTaGGTCTGCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAWLFGC*VCQRPW
Trigger: CCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTGTAGGGGAATGGCGTaGAACCTGCGGACGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRECRGMA*NLRTRA
Trigger: GGCCCTCGTCCGCAGGTTCCACGCCATTCCCCTACA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCTGCGAGCAGAGCAGTaGCTTGGGCTCCTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQLRAEQ*LGLLVP
Trigger: TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCAAGGATGCCGGCTCTaGACGGACAGATGGATGGAG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNQGCRL*TDRWME
Trigger: CTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGTGGTCATCCTGCTTTaGGTCCCTGGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGVVILL*VPGRPG
Trigger: GCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCAC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGGGAGGCAGTGGCGTaGAGGTGCGTGGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGGEAVA*RCVVIL
Trigger: CAGGATGACCACGCACCTCCACGCCACTGCCTCCCC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGATTCGGGGGAGGCAGTaGCGTGGAGGTGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQIRGRQ*RGGAWS
Trigger: TGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCCACCTGGCCTGACTTaGTTTCCAGCAATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALPPGLT*FPAISL
Trigger: CAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGGCCACCCCGTCACTaGCACCAGAAACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREGPPRH*HQKLPP
Trigger: TGGAGGCAGTTTCTGGTGCCAGTGACGGGGTGGCCC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404621.5
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCCGGGCGATCTGCACTaGGTAGGAAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREPGDLH*VGKAVG
Trigger: CCCCACAGCCTTTCCTACCCAGTGCAGATCGCCCGG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCGCAGGTGGAGCTCCTaGGACCGTTCATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIRRWSS*DRSFPG
Trigger: GCCCGGGAATGAACGGTCCCAGGAGCTCCACCTGCG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACGCAGGTGGAGCTCCTaGGACCGTTCATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGRRWSS*DRSFPG
Trigger: GCCCGGGAATGAACGGTCCCAGGAGCTCCACCTGCG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTCGGGCAGGTATGAGTaGGACTCTGGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASGRYE*DSGRRW
Trigger: CCACCTGCGGCCAGAGTCCCACTCATACCTGCCCGA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGATCAGCTCCTCCTTaGACAGCCGTGGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGSAPP*TAVAAP
Trigger: TGGTGCCGCCACGGCTGTCCAAGGAGGAGCTGATCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTACGCGGTCCATGTTCTaGATCAGCTCCTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTTRSMF*ISSSLD
Trigger: GTCCAAGGAGGAGCTGATCCAGAACATGGACCGCGT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCTTCGACTCGATaGGCGGCGGTGACACGGGCT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGGASTR*AAVTRA
Trigger: AGCCCGTGTCACCGCCGCCCATCGAGTCGAAGCACC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCTTCTTCCGCATCGCCTaGTTTATTTTGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RGGAWSSCFGSLAALAACFFRIA*FILMFS
Trigger: TGAGAACATCAAAATAAACCAGGCGATGCGGAAGAA...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGGGATCACGGCCAGCTaGCGCATCTGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQGITAS*RICFSR
Trigger: CCTGGAGAAGCAGATGCGCCAGCTGGCCGTGATCCC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCACATGTTCATGACCTaGCGGTCTTTGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRHMFMT*RSLYTF
Trigger: GAAGGTGTACAAAGACCGCCAGGTCATGAACATGTG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGTCGTTGTCCTCCCCTaGGGTGTCGTCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTVVVLP*GVVCLL
Trigger: GAGAAGACAGACGACACCTCAGGGGAGGACAACGAC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGATGCTCTCGGTGTCTaGGCTGTTGTTGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLADALGV*AVVDSG
Trigger: GCCACTGTCAACAACAGCTCAGACACCGAGAGCATC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATTGGCGGCCTCAGTGTaGGGAGAGGGGATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLAASV*GEGMLS
Trigger: CGAGAGCATCCCCTCTCCTCACACTGAGGCCGCCAA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGCCTTGGCATGCTCTaGGTACGGGACGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGGLGML*VRDVEL
Trigger: CAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTCACTCCGCTaGAGGGTGCCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPASLR*RVPAFW
Trigger: CCAAAAAGCTGGCACCCTTCAGCGGAGTGAAGCAGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTCTTGCCTTCGTAGATaGCGTGGCCCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKSCLRR*RGPWAG
Trigger: GCCTGCCCAAGGGCCACGTCATCTACGAAGGCAAGA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGAGGGATCCCTTGTGTaGTGGACCCGCGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKEGSLV*WTRGCG
Trigger: ACCACATCCGCGGGTCCATCACACAAGGGATCCCTC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCCGTCGTGGTGGACGTaGGGATGGACTTTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKPSWWT*GWTFPA
Trigger: AGCGGGAAAAGTCCATCCTCACGTCCACCACGACGG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCCGTCGTGGTGGACGTaGGGATGGACTTTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQPSWWT*GWTFPA
Trigger: AGCGGGAAAAGTCCATCCTCACGTCCACCACGACGG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATCCGCCCACCTGGCCTaGCTTGGTTTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSAHLA*LGFQQS
Trigger: AGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGCTACGGTCCTTGGTaGGGTCTTCAGATCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGYGPW*GLQIPQ
Trigger: CTGCGGGATCTGAAGACCTCACCAAGGACCGTAGCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGATTTTGATGTTCTCATaGTACTGCCGGGTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLILMFS*YCRVSE
Trigger: CTCCGACACCCGGCAGTATCATGAGAACATCAAAAT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCGCCTGGTTTATTTTaGTGTTCTCATGATACTGCC +
Preference number: 4 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSPGLF*CSHDTA
Trigger: GGCAGTATCATGAGAACATCAAAATAAACCAGGCGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGCCATCGATGATCTCTaGCACCTCGTGCTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAAIDDL*HLVLAA
Trigger: CGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACTGAGAGGCCATCGATaGTCTCTGACACCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGLRGHR*SLTPRA
Trigger: AGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCACTCCACATGTTCATaGCCTGGCGGTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARHSTCS*PGGLCT
Trigger: TGTACAAAGACCGCCAGGTCATGAACATGTGGAGTG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTTCAGCTTGTGCTGCTaGAAGATCTCATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWFSLCC*KISSRF
Trigger: GAACCTCGATGAGATCTTGCAGCAGCACAAGCTGAA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCATCTTCAGCTTGTGCTaGTGCAAGATCTCATCGAGG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVIFSLC*CKISSR
Trigger: CCTCGATGAGATCTTGCAGCAGCACAAGCTGAAGAT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGATCTTCAGCTTGTGCTaGTGCAAGATCTCATCGAGG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWIFSLC*CKISSR
Trigger: CCTCGATGAGATCTTGCAGCAGCACAAGCTGAAGAT...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTGTGAGGAGAGGGGATaGTCTCGGTGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNCEERG*SRCLSC
Trigger: ACAGCTCAGACACCGAGAGCATCCCCTCTCCTCACA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGATGGCAGCCGCTCGCTaGTTCAGCTGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAMAAAR*FSCFRS
Trigger: GGACCTGAAGCAGCTGAAGCAGCGAGCGGCTGCCAT...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGGGACAGCTGCTCCTaGTTCACTCCGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGDSCS*FTPLKG
Trigger: ACCCTTCAGCGGAGTGAAGCAGGAGCAGCTGTCCCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCCATCATGTCATAGGTaGGCTTGGGGGCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAPSCHR*AWGRPS
Trigger: AGACGGCCGCCCCCAAGCGCACCTATGACATGATGG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCCATCATGTCATAGGTaGGCTTGGGGGCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQPSCHR*AWGRPS
Trigger: AGACGGCCGCCCCCAAGCGCACCTATGACATGATGG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCCGCGGATGTGGTGCTaGTCTTTGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIPRMWC*SLRWWG
Trigger: CCCCCACCACCTCAAAGAGCAGCACCACATCCGCGG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGACCCGCGGATGTGGTaGTGCTCTTTGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGADPRMW*CSLRWW
Trigger: CCACCACCTCAAAGAGCAGCACCACATCCGCGGGTC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCAGGTAGTCCTCCTGTaGCTCCACGTAGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQQVVLL*LHVGPR
Trigger: CCTCGGTCCTACGTGGAGGCACAGGAGGACTACCTG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAAGGGAGCGTACGTCGTaGTTTTTGGAGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGRERTS*FLEPVV
Trigger: CACCACTGGCTCCAAAAAGCACGACGTACGCTCCCT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGGGAGCGTACGTCGTaGTTTTTGGAGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLARERTS*FLEPVV
Trigger: CACCACTGGCTCCAAAAAGCACGACGTACGCTCCCT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGTGGCCGGCAAAGGGTaGCCCGTGGTCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIVAGKG*PVVLIG
Trigger: ACCTATGAGGACCACGGGGCACCCTTTGCCGGCCAC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTCATTGATGATGGTCTaGCGGTTCTCCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSLMMV*RFSSAA
Trigger: GGCGGCGCTGGAGAACCGGCAGACCATCATCAATGA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATCATTGATGATGGTCTaGCGGTTCTCCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTSLMMV*RFSSAA
Trigger: GGCGGCGCTGGAGAACCGGCAGACCATCATCAATGA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGTGGCCGCGTTGTGGTaGATCTGCTGCGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAVAALW*ICCEVM
Trigger: CATCACCTCGCAGCAGATGCACCACAACGCGGCCAC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACAGGTCTCCAGATGGGTaGGTGCTCCACCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDRSPDG*VLHRRG
Trigger: ACCACGACGGTGGAGCACGCACCCATCTGGAGACCT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGAGGTCTCCAGATGGGTaGGTGCTCCACCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKRSPDG*VLHRRG
Trigger: ACCACGACGGTGGAGCACGCACCCATCTGGAGACCT...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGAGGTCTCCAGATGGGTaGGTGCTCCACCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQRSPDG*VLHRRG
Trigger: ACCACGACGGTGGAGCACGCACCCATCTGGAGACCT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTTTGGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: LCKPNRGFHEVAGDADALALAPS*PPVGTQ
Trigger: CTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGC...CAAAGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCCAGCCCCATGTTGGTaGTGGCATGTTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKPAPCW*WHVPAP
Trigger: CGGTGCAGGAACATGCCAGCACCAACATGGGGCTGG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTTCGGCTGCTGGGTCTaGCAGAGACCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKFGCWV*QRPWPS
Trigger: GGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGCAGTGGCGTGGAGGTaGGTGGTCATCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREAVAWR*VVILLW
Trigger: CCAAAGCAGGATGACCACGCACCTCCACGCCACTGC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGCGCGGGGGCTaGGAGCTCAGTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREGGRGG*ELSLDF
Trigger: AAAGTCTAAACTGAGCTCGCAGCCCCCGCGCCCTCC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAAGAATACCACCACCCTaGGCAGATGGCGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTRIPPP*ADGGHR
Trigger: TCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCT...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTTCAGCTTAGAGATCTaGTGCTCTACCATGGTGATC +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQFSLEI*CSTMVI
Trigger: GATCACCATGGTAGAGCAGCAGATCTCTAAGCTGAA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTCCTCCAGCTGTTGCTaGTTCTTCTTCAGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVSSSCC*FFFSLE
Trigger: CTCTAAGCTGAAGAAGAAGCAGCAACAGCTGGAGGA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTCCTGCAGCTCGCGCTaGTTGCGGATCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASCSSR*LRISGN
Trigger: GTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCAGGA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCCAAAGTTCTTGGGATaGTGCATGAACTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARPKFLG*CMNFSR
Trigger: CCGGGAGAAGTTCATGCAGCATCCCAAGAACTTTGG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTCATCTTTCTCCTCCTaGCTGCTGCGGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASSFSS*LLRGMG
Trigger: GCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACACTGCGACACAGTCTTaGAGCCCACCATCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDTATQS*SPPSGR
Trigger: TCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGACTGCGACACAGTCTTaGAGCCCACCATCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGATATQS*SPPSGR
Trigger: TCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGT...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACACTGCATTCCCCTCTaGGCACCTCATTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTHCIPL*APHSQR
Trigger: CCTCTGGGAATGAGGTGCCCAGAGGGGAATGCAGTG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAAGGTCCAGTGGCTTCTaGGGTGAGGCATTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGRSSGF*GEALAR
Trigger: CCGGGCCAATGCCTCACCCCAGAAGCCACTGGACCT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCTCGGCTGCGAAGGCTaGGAAGAACACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHLGCEG*EEHRLL
Trigger: GAGAAGCCTGTGTTCTTCCCAGCCTTCGCAGCCGAG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTACGGGACGTGGAGCTaGACCGACATTCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHYGTWS*TDIPWE
Trigger: CTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTCCTCCTTGGAGCACTaGGTCACAGACATGCCACCC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSSLEH*VTDMPP
Trigger: GGGTGGCATGTCTGTGACCCAGTGCTCCAAGGAGGA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTTCTGCCGTCCTCCTTaGAGCACTGGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAFCRPP*STGSQT
Trigger: TGTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATTCTGCCGTCCTCCTTaGAGCACTGGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGFCRPP*STGSQT
Trigger: TGTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCCCGCTTTAGGAGCTTaGCCTCCCGACGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAPALGA*PPDAGS
Trigger: ACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGCGGGATCTCATGGATaGAGCGGCCCGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIAGSHG*SGPPPS
Trigger: TGAAGGAGGCGGGCCGCTCCATCCATGAGATCCCGC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGCGGATGAGGTAGGGTaGGTACAGGTGCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREADEVG*VQVRVG
Trigger: ACCTACCCGCACCTGTACCCACCCTACCTCATCCGC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGAGCACAGGCAGGTGTaGCACTTGGGACAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTEHRQV*HLGQVD
Trigger: ATCGACCTGTCCCAAGTGCCACACCTGCCTGTGCTC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCGAGGACGTGGTGGTTaGTTTTGTCAAGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHRGRGG*FCQVCW
Trigger: CCAACACACTTGACAAAACCAACCACCACGTCCTCG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGT +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTARTRT*WLVLSS
Trigger: ACTTGACAAAACCAACCACCACGTCCTCGTCCGAGC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGAGATGGGCGAGTGCTaGTGGGCATGGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIEMGEC*WAWEWE
Trigger: CTCCCACTCCCATGCCCACCAGCACTCGCCCATCTC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGACACTGGGTCTCTGCTaGAGGGCATCCTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRETLGLC*RASWVR
Trigger: TCGGACCCAGGATGCCCTCCAGCAGAGACCCAGTGT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGACACTGGGTCTCTGCTaGAGGGCATCCTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKTLGLC*RASWVR
Trigger: TCGGACCCAGGATGCCCTCCAGCAGAGACCCAGTGT...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTTCCAGTTCCTGGATaGAAAAGGGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVPVPG*KRVYFE
Trigger: CTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCGGAGTTCCAGTTCCTaGATGGAAAAGGGTTTACTT +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQRSSSS*MEKGLL
Trigger: AAGTAAACCCTTTTCCATCCAGGAACTGGAACTCCG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGACCGACGTCTTGTTTaGCTCTGGAGACCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNDRRLV*LWRPLA
Trigger: GGCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTGTTGCCTGGAGACTTaGAGCCCATCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHCCLET*SPSCWA
Trigger: AGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKKKAGG*LVLPGD
Trigger: GTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTT...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQKKAGG*LVLPGD
Trigger: GTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGGCTCATTCCGGTTGTaGGTGTTCAGCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHGSFRL*VFSFLL
Trigger: CAACAAGAAGCTGAACACCCACAACCGGAATGAGCC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAATCTCCGTCCCAGGCTaGCTGATATTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: VGECLVLRAEQWLGLLVPISVPG*LILYSG
Trigger: GCCTGAATACAATATCAGCCAGCCTGGGACGGAGAT...TGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGCCCCATGTTGGTGCTaGCATGTTCCTGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQAPCWC*HVPAPP
Trigger: AGGCGGTGCAGGAACATGCCAGCACCAACATGGGGC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGGGTTGTAGGGGAATaGCGTGGAACCTGCGGACGA +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGVVGE*RGTCGR
Trigger: TCGTCCGCAGGTTCCACGCCATTCCCCTACAACCCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGGGTTGTAGGGGAATaGCGTGGAACCTGCGGACGA +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGVVGE*RGTCGR
Trigger: TCGTCCGCAGGTTCCACGCCATTCCCCTACAACCCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCTCTGGACGGACAGATaGATGGAGGCGCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRILWTDR*MEAQAD
Trigger: GTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQAQFRL*FQMHSG
Trigger: CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGAGCAATCTCGTTGGCTaGGGCAGTCTGTGGGGACCG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESNLVG*GSLWGP
Trigger: CGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTTTTGTCCGCCCACCTaGCCTGACTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAFCPPT*PDLVSS
Trigger: GCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTTTTGTCCGCCCACCTaGCCTGACTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNFCPPT*PDLVSS
Trigger: GCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACGTTCATTCCCGGGCTaGAACTCAGACAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTRSFPG*NSDSRE
Trigger: CTCCCTGCTGTCTGAGTTCCAGCCCGGGAATGAACG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGCCTCATTAGCCATTaGGCGGGTGATGCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGLISH*AGDAAF
Trigger: AAAGGCCGCATCACCCGCTCAATGGCTAATGAGGCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGCCTCATTAGCCATTaGGCGGGTGATGCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGLISH*AGDAAF
Trigger: AAAGGCCGCATCACCCGCTCAATGGCTAATGAGGCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGATGCTCTCGGTGTCTaGGCTGTTGTTGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHDALGV*AVVDSG
Trigger: GCCACTGTCAACAACAGCTCAGACACCGAGAGCATC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTCTTGCCTTCGTAGATaGCGTGGCCCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRISCLRR*RGPWAG
Trigger: GCCTGCCCAAGGGCCACGTCATCTACGAAGGCAAGA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCCGTCGTGGTGGACGTaGGGATGGACTTTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIPSWWT*GWTFPA
Trigger: AGCGGGAAAAGTCCATCCTCACGTCCACCACGACGG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGAAAAGGGTTTACTTTaGGTCTTTTCCCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTEKGLL*VFSRCG
Trigger: CCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATGTCTGAGCTGTTGTTaGCAGTGGCTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGCLSCC*QWLQPP
Trigger: AGGAGGCTGAAGCCACTGTCAACAACAGCTCAGACA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR TCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGATTTTGATGTTCTCATaGTACTGCCGGGTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALILMFS*YCRVSE
Trigger: CTCCGACACCCGGCAGTATCATGAGAACATCAAAAT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCATTGTTTCCGAGCGTaGTTCCTCCTCTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHHCFRA*FLLLKY
Trigger: GTACTTCAAGAGGAGGAATCACGCTCGGAAACAATG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATGCTGCTGTTGTTGCTaGTGCTGGCTCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGCCCCC*CWLLPR
Trigger: CCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTGCTGCTGTTGTTGCTaGTGCTGGCTCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRICCCCC*CWLLPR
Trigger: CCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTTCAGCTTGTGCTGCTaGAAGATCTCATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALFSLCC*KISSRF
Trigger: GAACCTCGATGAGATCTTGCAGCAGCACAAGCTGAA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGCTCGCTGCTTCAGCTaGTTCAGGTCCAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDARCFS*FRSSGF
Trigger: GAAGCCACTGGACCTGAAGCAGCTGAAGCAGCGAGC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGCTCGCTGCTTCAGCTaGTTCAGGTCCAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQARCFS*FRSSGF
Trigger: GAAGCCACTGGACCTGAAGCAGCTGAAGCAGCGAGC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCATGGCAGCCGCTCGCTaGTTCAGCTGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIMAAAR*FSCFRS
Trigger: GGACCTGAAGCAGCTGAAGCAGCGAGCGGCTGCCAT...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTCGAGGACGCTGGGGTaGTTGGCAGAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRISRTLG*LAEEMR
Trigger: CCTCATCTCCTCTGCCAAGCACCCCAGCGTCCTCGA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACCATCATGTCATAGGTaGGCTTGGGGGCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGPSCHR*AWGRPS
Trigger: AGACGGCCGCCCCCAAGCGCACCTATGACATGATGG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGACCCGCGGATGTGGTaGTGCTCTTTGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGDPRMW*CSLRWW
Trigger: CCACCACCTCAAAGAGCAGCACCACATCCGCGGGTC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACGGGGCTGTAGCTGCTaGCGTGGTAACCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGRGCSC*RGNPEN
Trigger: GTTCTCTGGGTTACCACGGCAGCAGCTACAGCCCCG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGATGACCTCACTGATGTaGTGGGCCAGGGTGACCACC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREMTSLM*WARVTT
Trigger: GGTGGTCACCCTGGCCCAGCACATCAGTGAGGTCAT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCCAGCCCCATGTTGGTaGTGGCATGTTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIPAPCW*WHVPAP
Trigger: CGGTGCAGGAACATGCCAGCACCAACATGGGGCTGG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGATATTTACCCATGAGTaGCTTTCTAATTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: TASRAVAWAPRPRRGGGQIFTHE*LSNYGL
Trigger: GAGGCCATAATTAGAAAGGCACTCATGGGTAAATAT...CTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413172.1
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATACTTGGCTTTTCGGCTaGTGGGTCTGCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHTWLFG*WVCQRP
Trigger: AGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGT...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCAGCTTAGAGATCTGCTaGTCTACCATGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVSLEIC*STMVIS
Trigger: AGAGATCACCATGGTAGAGCAGCAGATCTCTAAGCT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGGGGTTGTTCTCGATaGGCTCCACCTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGGCSR*APPSSP
Trigger: GGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCAGTTTTGCGGCCTTTaGAGGCCACAGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHQFCGL*RPQPPS
Trigger: AGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTTTGCGTCTTCCCTaGCTGTTGGCAGTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPLRLP*LLAVLR
Trigger: CCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTGGACCGACATTCCTTaGGAGATGGCACCTATTTGC +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTWTDIP*EMAPIC
Trigger: GCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTACGGGACGTGGAGCTaGACCGACATTCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDYGTWS*TDIPWE
Trigger: CTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGTACAGGACGTCAGCTaGCGTGCCGTGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGVQDVS*RAVGDG
Trigger: TCCATCACCCACGGCACGCCAGCTGACGTCCTGTAC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGATGGACCCGCGGATGTaGTGCTGCTCTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQMDPRM*CCSLRW
Trigger: CCACCTCAAAGAGCAGCACCACATCCGCGGGTCCAT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTTTTGGAGCCAGTGGTaGACGCGCCGGTGTCGTACT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAFWSQW*TRRCRT
Trigger: AGTACGACACCGGCGCGTCCACCACTGGCTCCAAAA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGTCAGCTTTCGGTCCTaGGATGCCTTGCTGGACGAA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTVSFRS*DALLDE
Trigger: TTCGTCCAGCAAGGCATCCCAGGACCGAAAGCTGAC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGCGGATGAGGTAGGGTaGGTACAGGTGCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGADEVG*VQVRVG
Trigger: ACCTACCCGCACCTGTACCCACCCTACCTCATCCGC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGAGCACAGGCAGGTGTaGCACTTGGGACAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREEHRQV*HLGQVD
Trigger: ATCGACCTGTCCCAAGTGCCACACCTGCCTGTGCTC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTTTTGTCAAGTGTGTTaGACCTCCTGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTFCQVC*TSWGEW
Trigger: CCACTCTCCCCAGGAGGTCCAACACACTTGACAAAA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNARTRT*WLVLSS
Trigger: ACTTGACAAAACCAACCACCACGTCCTCGTCCGAGC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTGTTGTGAAGCACACTaGGTCTCTGCTGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNCCEAH*VSAGGH
Trigger: ATGCCCTCCAGCAGAGACCCAGTGTGCTTCACAACA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCGTCATGCCCTCCGGTaGGGACACAGGTTCAATACC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGARHALR*GHRFNT
Trigger: GGTATTGAACCTGTGTCCCCACCGGAGGGCATGACG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTGTTGCCTGGAGACTTaGAGCCCATCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRECCLET*SPSCWA
Trigger: AGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLAEEG*RLAGVA
Trigger: GGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCTCATTCCGGTTGTaGGTGTTCAGCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTGSFRL*VFSFLL
Trigger: CAACAAGAAGCTGAACACCCACAACCGGAATGAGCC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGGGTTGTAGGGGAATaGCGTGGAACCTGCGGACGA +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGGVVGE*RGTCGR
Trigger: TCGTCCGCAGGTTCCACGCCATTCCCCTACAACCCC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWAQFRL*FQMHSG
Trigger: CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACACCACCCTGCGCAGATaGCGGCCACAGAATACGCAT +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDTTLRR*RPQNTH
Trigger: ATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCGTTCATTCCCGGGCTaGAACTCAGACAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQRSFPG*NSDSRE
Trigger: CTCCCTGCTGTCTGAGTTCCAGCCCGGGAATGAACG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATACGCGGTCCATGTTCTaGATCAGCTCCTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHTRSMF*ISSSLD
Trigger: GTCCAAGGAGGAGCTGATCCAGAACATGGACCGCGT...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCACATGTTCATGACCTaGCGGTCTTTGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHHMFMT*RSLYTF
Trigger: GAAGGTGTACAAAGACCGCCAGGTCATGAACATGTG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCTTCCTCTCCAGGAATaGTGCGATCAGGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNLPLQE*CDQAKV
Trigger: AACTTTGGCCTGATCGCATCATTCCTGGAGAGGAAG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCACACGCCTCTTaGACGGTAAGCAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPAHAS*TVSRDQ
Trigger: TTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGCGCTTGCTTTCAATaGACTCCATCTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGACFQ*TPSLTS
Trigger: GGAAGTCAGAGATGGAGTTCATTGAAAGCAAGCGCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTCGTGATTCCTCCTCTTaGAGTACAAGATTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLRDSSS*STRLAS
Trigger: AGAAGCTAATCTTGTACTTCAAGAGGAGGAATCACG...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGTGAGGAGAGGGGATaGTCTCGGTGTCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGACEERG*SRCLSC
Trigger: ACAGCTCAGACACCGAGAGCATCCCCTCTCCTCACA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIEMAPI*LSRTLG
Trigger: CCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACAGGGAGCGTACGTCGTaGTTTTTGGAGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDRERTS*FLEPVV
Trigger: CACCACTGGCTCCAAAAAGCACGACGTACGCTCCCT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCTTTCGGTCCTGGGATaGCTTGCTGGACGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALSVLG*LAGRKA
Trigger: AGCCTTTCGTCCAGCAAGGCATCCCAGGACCGAAAG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCTTTCGGTCCTGGGATaGCTTGCTGGACGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKLSVLG*LAGRKA
Trigger: AGCCTTTCGTCCAGCAAGGCATCCCAGGACCGAAAG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATG +
Preference number: 4 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRFLLIS*FLDLTM
Trigger: CATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGQSPSE*TEETEG
Trigger: ACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRELDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTTAGACAGGCAAGGATaGCGGCTCTGGACGGACAGA +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALDRQG*RLWTDR
Trigger: TCTGTCCGTCCAGAGCCGGCATCCTTGCCTGTCTAA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGTCTTCCCTGGCTGTTaGCAGTTTTGCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDVFPGC*QFCGLW
Trigger: CCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGAC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGTTGTTGACAGTGGCTaGGCCACTGCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKVVDSG*ATAFPS
Trigger: AGAGGGGAATGCAGTGGCCCAGCCACTGTCAACAAC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTGGACCGACATTCCTTaGGAGATGGCACCTATTTGC +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAWTDIP*EMAPIC
Trigger: GCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTGGACCGACATTCCTTaGGAGATGGCACCTATTTGC +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNWTDIP*EMAPIC
Trigger: GCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTACGGGACGTGGAGCTaGACCGACATTCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIYGTWS*TDIPWE
Trigger: CTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTCTGAGTACGGGACGTaGAGCTGGACCGACATTCCT +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKSEYGT*SWTDIP
Trigger: AGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGTCAGCTTTCGGTCCTaGGATGCCTTGCTGGACGAA +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKVSFRS*DALLDE
Trigger: TTCGTCCAGCAAGGCATCCCAGGACCGAAAGCTGAC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGGCAGGTGTGGCACTTaGGACAGGTCGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIGRCGT*DRSMMP
Trigger: AGGCATCATCGACCTGTCCCAAGTGCCACACCTGCC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATTTTGTCAAGTGTGTTaGACCTCCTGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGFCQVC*TSWGEW
Trigger: CCACTCTCCCCAGGAGGTCCAACACACTTGACAAAA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTTCCAGTTCCTGGATaGAAAAGGGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVPVPG*KRVYFE
Trigger: CTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLCKPNRGFHEVAGDADAKKAGG*LVLPGD
Trigger: GTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTT...AGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTTTTGTCCGCCCACCTaGCCTGACTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREFCPPT*PDLVSS
Trigger: GCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCGTCTGTCTTCTCCTTaGGGAGGTCTTCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQRLSSP*GGLPCR
Trigger: ACGACAAGGAAGACCTCCTCAAGGAGAAGACAGACG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCCTGCACACGCCTCTTaGACGGTAAGCAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREPAHAS*TVSRDQ
Trigger: TTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAAATGAACTCCATCTCTaGCTTCCCCAGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGNELHL*LPQLGQ
Trigger: CTGCCCGAGCTGGGGAAGTCAGAGATGGAGTTCATT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGGCGCTTGCTTTCAATaGACTCCATCTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHGACFQ*TPSLTS
Trigger: GGAAGTCAGAGATGGAGTTCATTGAAAGCAAGCGCC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCGTGATTCCTCCTCTTaGAGTACAAGATTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHRDSSS*STRLAS
Trigger: AGAAGCTAATCTTGTACTTCAAGAGGAGGAATCACG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACATTGTTTCCGAGCGTaGTTCCTCCTCTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGHCFRA*FLLLKY
Trigger: GTACTTCAAGAGGAGGAATCACGCTCGGAAACAATG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAAGGGAGCGTACGTCGTaGTTTTTGGAGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGRERTS*FLEPVV
Trigger: CACCACTGGCTCCAAAAAGCACGACGTACGCTCCCT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCTTTCGGTCCTGGGATaGCTTGCTGGACGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRILSVLG*LAGRKA
Trigger: AGCCTTTCGTCCAGCAAGGCATCCCAGGACCGAAAG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCATATTTACCCATGAGTaGCTTTCTAATTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPIFTHE*LSNYGL
Trigger: GAGGCCATAATTAGAAAGGCACTCATGGGTAAATAT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCACTTGGCTTTTCGGCTaGTGGGTCTGCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRITWLFG*WVCQRP
Trigger: AGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGT...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGAGAGTGTCTCGTACTaGGAGCAGAGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIESVSY*EQSSGL
Trigger: CAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGADFGSK*IRGRQW
Trigger: CCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGCATCGAATTCATTCTaGCCAAGGAAGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQASNSF*PRKGGR
Trigger: CCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCAAAGTTCTTGGGATaGTGCATGAACTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPKFLG*CMNFSR
Trigger: CCGGGAGAAGTTCATGCAGCATCCCAAGAACTTTGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGTCTTCCCTGGCTGTTaGCAGTTTTGCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGVFPGC*QFCGLW
Trigger: CCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGAC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAACATTCCTTGGGAGATaGCACCTATTTGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGTFLGR*HLFASR
Trigger: TCGAGAGGCAAATAGGTGCCATCTCCCAAGGAATGT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGTTGTGAAGCACACTaGGTCTCTGCTGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGACCEAH*VSAGGH
Trigger: ATGCCCTCCAGCAGAGACCCAGTGTGCTTCACAACA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCGTCTTGTTTGGCTCTaGAGACCTCTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIRLVWL*RPLAPF
Trigger: GAAGGGGGCAAGAGGTCTCCAGAGCCAAACAAGACG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTCGTCATGCCCTCCGGTaGGGACACAGGTTCAATACC +
Preference number: 4 (lower is better)
Translates to: LLCKPNRGFHEVAGDADARHALR*GHRFNT
Trigger: GGTATTGAACCTGTGTCCCCACCGGAGGGCATGACG...AGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp CTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTTCCGACCACACTCCGGGAGTGCCCTaGCTCCGTCATGCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLRMNHTNTKWSNRLSDHTPGVP*LRHALR
Trigger: CCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGT...GTGGTCGGAAAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp TCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATTGTTGCCTGGAGACTTaGAGCCCATCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLCKPNRGFHEVAGDADCCLET*SPSCWA
Trigger: AGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACA...ATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGCTCATTCCGGTTGTaGGTGTTCAGCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTGSFRL*VFSFLL
Trigger: CAACAAGAAGCTGAACACCCACAACCGGAATGAGCC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATTTTGTCCGCCCACCTaGCCTGACTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGFCPPT*PDLVSS
Trigger: GCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTCTTCCGCATCGCCTaGTTTATTTTGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWFFRIA*FILMFS
Trigger: TGAGAACATCAAAATAAACCAGGCGATGCGGAAGAA...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGAACTTGATGCGCTGCTaGTCAGCGTCGTACAGCATG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRENLMRC*SASYSM
Trigger: CATGCTGTACGACGCTGACCAGCAGCGCATCAAGTT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGATGGAGCTGGCTCATACGAATACAAAGTaGTCAAATCGTCTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: RDWAFYPRPRVRDLMELAHTNTK*SNRLSD
Trigger: GTCGGAAAGACGATTTGACCACTTTGTATTCGTATG...AGCCAGCTCCATCAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCTTCCTCTCCAGGAATaGTGCGATCAGGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQLPLQE*CDQAKV
Trigger: AACTTTGGCCTGATCGCATCATTCCTGGAGAGGAAG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGAAAAGGGTTTACTTTaGGTCTTTTCCCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQEKGLL*VFSRCG
Trigger: CCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACTTGCTTCTTGGACTTaGCCATGGCGGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLASWT*PWRSCS
Trigger: AGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGACTTTGGTTCCAAATaGATTCGGGGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGDFGSK*IRGRQW
Trigger: CCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGCTTAGAGATCTGCTaGTCTACCATGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLASLEIC*STMVIS
Trigger: AGAGATCACCATGGTAGAGCAGCAGATCTCTAAGCT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTCCTCCAGCTGTTGCTaGTTCTTCTTCAGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSSSCC*FFFSLE
Trigger: CTCTAAGCTGAAGAAGAAGCAGCAACAGCTGGAGGA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTTCCAGAATCCGATGTaGAGCTTCAGCCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAFQNPM*SFSLLP
Trigger: CGGAAGAAGGCTGAAGCTGCACATCGGATTCTGGAA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTGGACCGACATTCCTTaGGAGATGGCACCTATTTGC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKWTDIP*EMAPIC
Trigger: GCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIRTRTW*LVLSSV
Trigger: CACACTTGACAAAACCAACCACCACGTCCTCGTCCG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACGGAGTTCCAGTTCCTaGATGGAAAAGGGTTTACTT +
Preference number: 4 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGRSSSS*MEKGLL
Trigger: AAGTAAACCCTTTTCCATCCAGGAACTGGAACTCCG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp AAATCACAGCAGCGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGTTGAGTGGCAAAGACTaGAGCCTGGAAAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: KSQQRDWAFYPRPRVRDLLSGKD*SLENFF
Trigger: GAAGAAATTTTCCAGGCTCCAGTCTTTGCCACTCAA...CAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGAAAAGGGTTTACTTTaGGTCTTTTCCCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGEKGLL*VFSRCG
Trigger: CCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGAACGACGTGTGTAAATaGCAGAATACCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQNDVCK*QNTTTL
Trigger: CAGGGTGGTGGTATTCTGTCATTTACACACGTCGTT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGAACGACGTGTGTAAATaGCAGAATACCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGANDVCK*QNTTTL
Trigger: CAGGGTGGTGGTATTCTGTCATTTACACACGTCGTT...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCATTGTTTCCGAGCGTaGTTCCTCCTCTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAHCFRA*FLLLKY
Trigger: GTACTTCAAGAGGAGGAATCACGCTCGGAAACAATG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTCCATCTTCAGCTTGTaGTGCTGCAAGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKSIFSL*CCKISS
Trigger: CGATGAGATCTTGCAGCAGCACAAGCTGAAGATGGA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR GCA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATG +
Preference number: 4 (lower is better)
Translates to: FPAISLAGAVCGDRNERTFLLIS*FLDLTM
Trigger: CATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTTCAGCTTAGAGATCTaGTGCTCTACCATGGTGATC +
Preference number: 4 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHFSLEI*CSTMVI
Trigger: GATCACCATGGTAGAGCAGCAGATCTCTAAGCTGAA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTCCTCCAGCTGTTGCTaGTTCTTCTTCAGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSSSCC*FFFSLE
Trigger: CTCTAAGCTGAAGAAGAAGCAGCAACAGCTGGAGGA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGAAGTTCTTGGGATGCTaGATGAACTTCTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQKFLGC*MNFSRK
Trigger: CTTCCGGGAGAAGTTCATGCAGCATCCCAAGAACTT...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGACATTCCTTGGGAGATaGCACCTATTTGCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRETFLGR*HLFASR
Trigger: TCGAGAGGCAAATAGGTGCCATCTCCCAAGGAATGT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGTTCCAGTTCCTGGATaGAAAAGGGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAVPVPG*KRVYFE
Trigger: CTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAAC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CTTTCCGACCACTCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGCTCATTCCGGTTGTaGGTGTTCAGCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LSDHSLLCKPNRGFHEVAGSFRL*VFSFLL
Trigger: CAACAAGAAGCTGAACACCCACAACCGGAATGAGCC...CGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATTCAGCTTGTGCTGCTaGAAGATCTCATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGFSLCC*KISSRF
Trigger: GAACCTCGATGAGATCTTGCAGCAGCACAAGCTGAA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATG +
Preference number: 4 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAFLLIS*FLDLTM
Trigger: CATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATG +
Preference number: 4 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNFLLIS*FLDLTM
Trigger: CATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCAAGGTCTCCTTCTCCTaGTCACTCCACATGTTCATG +
Preference number: 4 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIKVSFS*SLHMFM
Trigger: CATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTT...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGCTCAGTTTAGACTTTaGTTCCAAATGCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREAQFRL*FQMHSG
Trigger: CCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGTCGCCTGGTTTATTTTaGTGTTCTCATGATACTGCC +
Preference number: 4 (lower is better)
Translates to: PAQMAATEYASNSFCPRKSPGLF*CSHDTA
Trigger: GGCAGTATCATGAGAACATCAAAATAAACCAGGCGA...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTCGCCTGGTTTATTTTaGTGTTCTCATGATACTGCC +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASPGLF*CSHDTA
Trigger: GGCAGTATCATGAGAACATCAAAATAAACCAGGCGA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCGTGATTCCTCCTCTTaGAGTACAAGATTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGARDSSS*STRLAS
Trigger: AGAAGCTAATCTTGTACTTCAAGAGGAGGAATCACG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR GCA 90 bp TCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGTTTGTAGCCAGGGATaGTCACACCTTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLCKPNRGFHEVAGDADVCSQG*SHLFCC
Trigger: ACAGCAGAAAAGGTGTGAGCATCCCTGGCTACAAAC...ATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGTTCCAGTTCCTGGATaGAAAAGGGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDVPVPG*KRVYFE
Trigger: CTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAAC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CCA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGTTCCAGTTCCTGGATaGAAAAGGGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAVPVPG*KRVYFE
Trigger: CTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAAC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CATACGAATACAAAGTGGTCAAATCGTCTTTCCGACCACTCGCTCCTTTGTAAATCACAGCAGCGCGACTaGGCCTTCTACCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HTNTKWSNRLSDHSLLCKSQQRD*AFYPRP
Trigger: TGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGA...TTTACAAAGGAGCGAGTGGTCGGAAAGACGATTTGACCACTTTGTATTCGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp CTTTCCGACCACTCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGTATAAAGGTGAAGTCTaGCACAGGTTGAGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSDHSLLCKPNRGFHEVAYKGEV*HRLSGK
Trigger: TTTGCCACTCAACCTGTGTCAGACTTCACCTTTATA...CGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp CTTTCCGACCACTCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGTGATGCAGATGCTTTaGAAATCACGTTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSDHSLLCKPNRGFHEVAVMQML*KSRFCS
Trigger: GCTACAGAAACGTGATTTTCAAAGCATCTGCATCAC...CGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAATATTTACCCATGAGTaGCTTTCTAATTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTIFTHE*LSNYGL
Trigger: GAGGCCATAATTAGAAAGGCACTCATGGGTAAATAT...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CCA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTTCTTCCGCATCGCCTaGTTTATTTTGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQFFRIA*FILMFS
Trigger: TGAGAACATCAAAATAAACCAGGCGATGCGGAAGAA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR TCA 90 bp ATACAAAGTGGTCAAATCGTCTTTCCGACCACTCGCTCCTTTGTAAACCAAACCCTTGCTTCTTGGACTTaGCCATGGCGGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: IQSGQIVFPTTRSFVNQTLASWT*PWRSCS
Trigger: AGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAG...GGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAGACGATTTGACCACTTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp ATACAAAGTGGTCAAATCGTCTTTCCGACCACTCGCTCCTTTGTAAACCAAACCAACAAGGGTGAGTGCTaGAATCACAGCAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: IQSGQIVFPTTRSFVNQTNKGEC*NHSSAT
Trigger: AGTCGCGCTGCTGTGATTTCAGCACTCACCCTTGTT...GGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAGACGATTTGACCACTTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp CTTTCCGACCACTCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGAAACAGCCATGTGCATaGAGAAAAAGCAACATTTCC +
Preference number: 4 (lower is better)
Translates to: LSDHSLLCKPNRGFHEVAKQPCA*RKSNIS
Trigger: GGAAATGTTGCTTTTTCTTCATGCACATGGCTGTTT...CGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACATATTTACCCATGAGTaGCTTTCTAATTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATEYASNSFCPRKGGREDIFTHE*LSNYGL
Trigger: GAGGCCATAATTAGAAAGGCACTCATGGGTAAATAT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
CDS-3UTR TCA 90 bp TTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTTCTCGGTCAGCTTGCTaGAGAAGGCTGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FKLLLRMNHTNTKWSNRLSRSAC*RRLAAG
Trigger: GCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGA...AAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCACGAGTCCGTGACCTaGTGGAGCTGGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNHESVT*WSWLQA
Trigger: AGCCTGGAGCCAGCTCCATCAGGTCACGGACTCGTG...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp CTTTCCGACCACTCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGAACTTCTGCTCCGAATaGATCATACGAATACAAAGT +
Preference number: 4 (lower is better)
Translates to: LSDHSLLCKPNRGFHEVANFCSE*IIRIQS
Trigger: ACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTT...CGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp CTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTTCCGACCACCGTTTCTGTAGCAACTaGTGGCTGCCTGCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLRMNHTNTKWSNRLSDHRFCSN*WLPAFS
Trigger: AGAAAACGCAGGCAGCCAGCAGTTGCTACAGAAACG...GTGGTCGGAAAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATAGCCCCATTCCACCGTaGCCACCACGGGGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNSPIPP*PPRGKC
Trigger: ACACTTGCCCCGTGGTGGGCACGGTGGAATGGGGCT...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp CTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTTTGGCAAAGACTGGAGCCTaGAAAATTTCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LCKPNRGFHEVAGDADALAKTGA*KISSCG
Trigger: TCCACAAGAAGAAATTTTCCAGGCTCCAGTCTTTGC...CAAAGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp CTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTTTGGGGGCAAGTGTTTCATaGAGTTTTAAACTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LCKPNRGFHEVAGDADALGASVS*SFKLLL
Trigger: GAGCAGAAGTTTAAAACTCCATGAAACACTTGCCCC...CAAAGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp TTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTTGGAGCCCATCCTGCTaGGCTCCGTCTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FKLLLRMNHTNTKWSNRLWSPSC*APSVPH
Trigger: ATGGGGAACAGACGGAGCCCAGCAGGATGGGCTCCA...AAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNLAEEG*RLAGVA
Trigger: GGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp TTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTAAGTCTGACACAGGTTaGGTGGCAAAGACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FKLLLRMNHTNTKWSNRLKSDTG*VAKTGA
Trigger: GGCTCCAGTCTTTGCCACTCAACCTGTGTCAGACTT...AAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR GCA 90 bp ATACAAAGTGGTCAAATCGTCTTTCCGACCACTCGCTCCTTTGTAAACCAAACCTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATG +
Preference number: 4 (lower is better)
Translates to: IQSGQIVFPTTRSFVNQTFLLIS*FLDLTM
Trigger: CATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAA...GGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAGACGATTTGACCACTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCTGACACAGGTTGAGTaGCAAAGACTGGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNLTQVE*QRLEPG
Trigger: TCCAGGCTCCAGTCTTTGCCACTCAACCTGTGTCAG...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATATCTCCGTCCCAGGCTaGCTGATATTGTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNISVPG*LILYSG
Trigger: GCCTGAATACAATATCAGCCAGCCTGGGACGGAGAT...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CCA 90 bp CTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTTCCGACCACGAAAATTTCTTCTTGTaGACTAAAACTGTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LLRMNHTNTKWSNRLSDHENFFL*TKTVPV
Trigger: CACCGGAACAGTTTTAGTCCACAAGAAGAAATTTTC...GTGGTCGGAAAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR TCA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATTTTCTGCAGCACTTTTaGAAAAACAGCCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNFLQHF*KNSHVH
Trigger: ATGCACATGGCTGTTTTTTCAAAAGTGCTGCAGAAA...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS CCA 90 bp CTCGGGCCGCCGGGGCGCTCAGGCAAGTGGCGGTGCCGATCGGGCTaGGGGCGCGCAGCAGGCCCGGCCTCGGGTCGGGACGCGATCCTC +
Preference number: 5 (lower is better)
Translates to: LGPPGRSGKWRCRSG*GRAAGPASGRDAIL
Trigger: GAGGATCGCGTCCCGACCCGAGGCCGGGCCTGCTGCGCGCCCCCAGCCCGATCGGCACCGCCACTTGCCTGAGCGCCCCGGCGGCCCGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458234.5
ENST00000542565.1
CDS GCA 90 bp GAGCCCTCCTTGAGCGGCCGCGGGGCCAGGGGCAGCTCGGGCGTGTaGCGCAGCTCCTCGCGCGGGATCTCATGGATGGAGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: EPSLSGRGARGSSGV*RSSSRGISWMERPA
Trigger: GGCGGGCCGCTCCATCCATGAGATCCCGCGCGAGGAGCTGCGGCACACGCCCGAGCTGCCCCTGGCCCCGCGGCCGCTCAAGGAGGGCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 90 bp GGTGCGGGTCCGAGGCCGAGGCAGGTGGCGCCGGCGGGTCCGGGCTaGCGTGGTGAGGTGCGAGGTTCTTCGCAGGGGTGCGGGCGATGG +
Preference number: 5 (lower is better)
Translates to: GAGPRPRQVAPAGPG*RGEVRGSSQGCGRW
Trigger: CCATCGCCCGCACCCCTGCGAAGAACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGGCGCCACCTGCCTCGGCCTCGGACCCGCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 90 bp GCTGGGAAGATGCCCCAGGGAGCGGGCCGAAGTGGGCCGGCAGGCTaGGCGGCCGCGGTCGGCTCTGCGAGGCTGCTGGTTGGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: AGKMPQGAGRSGPAG*AAAVGSARLLVGVC
Trigger: GCAGACGCCAACCAGCAGCCTCGCAGAGCCGACCGCGGCCGCCCAGCCTGCCGGCCCACTTCGGCCCGCTCCCTGGGGCATCTTCCCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS-3UTR CAA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGTCCTCCCACACGCGGTaGGTGAGCGGCGTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLSSHTR*VSGVRR
Trigger: CCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGA...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS CCA 90 bp CTGGACGAGGGCTGGCTCTCAGGCAGCGGCCGCAGGTGTGGGAGGTaGGCGGCCTCCCCGCCAAGCTTCACGGGGCCTGGCTGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LDEGWLSGSGRRCGR*AASPPSFTGPGCLG
Trigger: GCCCAAGCAGCCAGGCCCCGTGAAGCTTGGCGGGGAGGCCGCCCACCTCCCACACCTGCGGCCGCTGCCTGAGAGCCAGCCCTCGTCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS CCA 90 bp CCTTTGACCCCTGGGGCGGTCTGGAGCAGCGGGCTGGACGAGGGCTaGCTCTCAGGCAGCGGCCGCAGGTGTGGGAGGTGGGCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PLTPGAVWSSGLDEG*LSGSGRRCGRWAAS
Trigger: GGAGGCCGCCCACCTCCCACACCTGCGGCCGCTGCCTGAGAGCCAGCCCTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGTCAAAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCCGGGCTCCTGCTCTaGCCCCGGGGGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAGLLL*PRGLLP
Trigger: TGGCAGCAGCCCCCGGGGCAAGAGCAGGAGCCCGGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCCGGGCTCCTGCTCTaGCCCCGGGGGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRAGLLL*PRGLLP
Trigger: TGGCAGCAGCCCCCGGGGCAAGAGCAGGAGCCCGGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLSGVRR*QSPSEC
Trigger: GCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCT...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CAA 90 bp GAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCC +
Preference number: 5 (lower is better)
Translates to: EQWLGLLVPGVVGASEGPGLPET*AFPPPP
Trigger: GGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACC...GGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS CCA 90 bp TGGACGAAAGGCTGCCCTCCTGCAGGCGCGGCGTGGGCTCCCGCGTaGTCACGGGCGAACCTCGTGGGAGGTGGCCGGCAAAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: WTKGCPPAGAAWAPA*SRANLVGGGRQRVP
Trigger: GGGCACCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGCCGCGCCTGCAGGAGGGCAGCCTTTCGTCCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCT +
Preference number: 5 (lower is better)
Translates to: SGLGSSSQAWWGPARGPLGLPET*AFPPPP
Trigger: AGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACC...CAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413172.1
CDS-3UTR CAA 90 bp AGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: RAVAWAPRPRRGGGQRGASGVRR*QSPSEC
Trigger: GCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCT...GGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS-3UTR CAA 90 bp GAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: EQWLGLLVPGVVGASEGPEQSSG*GSSSQA
Trigger: CGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTC...GGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413172.1
ENST00000418829.5
CDS GCA 90 bp CAGGCACGTTCCAGTGCCCGGGCGTCGGCCATCACATCCAGCGGGTaGACGGGTGGGAACGTCCGGCCGGGGCTGCCGATGAGGGAGCGT +
Preference number: 5 (lower is better)
Translates to: QARSSARASAITSSG*TGGNVRPGLPMRER
Trigger: ACGCTCCCTCATCGGCAGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTGGATGTGATGGCCGACGCCCGGGCACTGGAACGTGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp GGGCGGCTGCTGCTGCCCCCACCCCCGCCGCTGCTGCCGCTGCTCTaGTCTGTACCAGGTCTCCAGATGGGTGCGTGCTCCACCGTCGTG +
Preference number: 5 (lower is better)
Translates to: GRLLLPPPPPLLPLL*SVPGLQMGACSTVV
Trigger: CACGACGGTGGAGCACGCACCCATCTGGAGACCTGGTACAGAGCAGAGCAGCGGCAGCAGCGGCGGGGGTGGGGGCAGCAGCAGCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440187.5
ENST00000453428.1
CDS CCA 90 bp CTGCAGGCGCGGCGTGGGCTCCCGCGTGGTCACGGGCGAACCTCGTaGGAGGTGGCCGGCAAAGGGTGCCCCGTGGTCCTCATAGGTCAG +
Preference number: 5 (lower is better)
Translates to: LQARRGLPRGHGRTS*EVAGKGCPVVLIGQ
Trigger: CTGACCTATGAGGACCACGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGCCGCGCCTGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGGGCGCCCGAGCTCTaGGCTGTGGTGGCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGAPEL*AVVALP
Trigger: CGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
72% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGGGCGCCCGAGCTCTaGGCTGTGGTGGCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGAPEL*AVVALP
Trigger: CGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCTGGGGGAGCTGGCTaGGTGGGAGCTGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAGGAG*VGAASS
Trigger: GGAGGACGCAGCTCCCACCAAGCCAGCTCCCCCAGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGCCGGGCTCCTGCTCTaGCCCCGGGGGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGAGLLL*PRGLLP
Trigger: TGGCAGCAGCCCCCGGGGCAAGAGCAGGAGCCCGGC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGTGATGGAGCCCTCCTaGAGCGGCCGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTVMEPS*SGRGAR
Trigger: CCTGGCCCCGCGGCCGCTCAAGGAGGGCTCCATCAC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCGCCGGTGTCGTACTaGAGCGGGGTGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAPVSY*SGVPCV
Trigger: CACGCAGGGCACCCCGCTCAAGTACGACACCGGCGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCTTGGGCTCCTCGTCCCAGGCGTGGTGGGGGCCAGCGAGGGGCCCGCTGCCCGAGAGGGTTAAAAGCATaGGCGCTGAGCGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: AWAPRPRRGGGQRGARCPRGLKA*ALSGGD
Trigger: GTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCT...CGGGCAGCGGGCCCCTCGCTGGCCCCCACCACGCCTGGGACGAGGAGCCCAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000413172.1
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRSGVRR*QSPSEC
Trigger: GCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp GTTGGTGAGCGGCGTCCGGCGGTTGCAGTCTCCCTCCGAGTGCACTaGGGAGACAGAGGGTGGCCGGTCCCCAGATGCCAGGCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: VGERRPAVAVSLRVH*GDRGWPVPRCQARG
Trigger: GCCCCGGGCCTGGCATCTGGGGACCGGCCACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCTCACCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000413172.1
ENST00000418829.5
ENST00000429285.6
ENST00000443451.6
ENST00000464377.1
CDS GCA 90 bp CCGCGTGGTCACGGGCGAACCTCGTGGGAGGTGGCCGGCAAAGGGTaGCCCGTGGTCCTCATAGGTCAGGGGGCTCTGCCGCGGCTTACC +
Preference number: 5 (lower is better)
Translates to: PRGHGRTSWEVAGKG*PVVLIGQGALPRLT
Trigger: GGTAAGCCGCGGCAGAGCCCCCTGACCTATGAGGACCACGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTGACCACGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 90 bp CCTCGCGCGGGATCTCATGGATGGAGCGGCCCGCCTCCTTCACCGTaGCCACCAGGCCCTCATGGGCCGGCTTCAGCTTCAGGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: PRAGSHGWSGPPPSP*PPGPHGPASASGGP
Trigger: TGGGCCCCCTGAAGCTGAAGCCGGCCCATGAGGGCCTGGTGGCCACGGTGAAGGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp TTCCAGTGCCCGGGCGTCGGCCATCACATCCAGCGGGTGCACGGGTaGGAACGTCCGGCCGGGGCTGCCGATGAGGGAGCGTACGTCGTG +
Preference number: 5 (lower is better)
Translates to: FQCPGVGHHIQRVHG*ERPAGAADEGAYVV
Trigger: CACGACGTACGCTCCCTCATCGGCAGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTGGATGTGATGGCCGACGCCCGGGCACTGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 90 bp GCACACTGGGTCTCTGCTGGAGGGCATCCTGGGTCCGAGGGGAGATaGGCGAGTGCTGGTGGGCATGGGAGTGGGAGGCGGGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: AHWVSAGGHPGSEGR*ASAGGHGSGRRGGC
Trigger: GCAGCCGCCCCGCCTCCCACTCCCATGCCCACCAGCACTCGCCCATCTCCCCTCGGACCCAGGATGCCCTCCAGCAGAGACCCAGTGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440187.5
ENST00000453428.1
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCAGGGTGGCTGGGGGCTaGGGCCCATTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRVAGG*GPFCPV
Trigger: CACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCCT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTAGGGTGGCTGGGGGCTaGGGCCCATTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRRVAGG*GPFCPV
Trigger: CACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCCT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTGATGGAGCCCTCCTaGAGCGGCCGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVMEPS*SGRGAR
Trigger: CCTGGCCCCGCGGCCGCTCAAGGAGGGCTCCATCAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGGCGGCTGGCTGGTGTaGCCTGGAGACTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRGGWLV*PGDLEP
Trigger: GGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCCTCCCACACGCGGTaGGTGAGCGGCGTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSSHTR*VSGVRR
Trigger: CCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: RGGAWSSCFGSLAALAACEQSSG*GSSSQA
Trigger: CGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSREQSSG*GSSSQA
Trigger: CGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGGCTCCTTCCTTGGTaGGGGGAGTCGGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGLLPW*GESAAA
Trigger: GGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCGTGGTCATCCTGCTTaGGGTCCCTGGCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRGHPA*GPWPPW
Trigger: CCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGCAGTCCCCGCCCCCTaGGTCCTGCGAGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTAVPAP*VLRVMG
Trigger: CCCCATCACTCGCAGGACCAAGGGGGCGGGGACTGC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS GCA 90 bp TGTAGGCCTCGGTCAGGTCCCGTGAGGGCGGTGGGGGCGGAGGCGTaGCCTCCCGCTTTAGGAGCTTGGCCTCCCGACGCAGGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: CRPRSGPVRAVGAEA*PPALGAWPPDAGSP
Trigger: AGGACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGGAGGGCACGCCTCCGCCCCCACCGCCCTCACGGGACCTGACCGAGGCCTACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 90 bp ACGCGGTTGGTGAGCGGCGTCCGGCGGTTGCAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGTGGCCGGTCCCCAGATGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TRLVSGVRRLQSPSE*TEETEGGRSPDARP
Trigger: GGGCCTGGCATCTGGGGACCGGCCACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCTCACCAACCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000413172.1
ENST00000418829.5
ENST00000429285.6
ENST00000443451.6
ENST00000464377.1
CDS GCA 90 bp GTCTCCCCCTCGGCCAAGTTTTCCGGAAACATAGGGCTGGGAAGATaGCCCAGGGAGCGGGCCGAAGTGGGCCGGCAGGCTGGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: VSPSAKFSGNIGLGR*PRERAEVGRQAGRP
Trigger: CGGCCGCCCAGCCTGCCGGCCCACTTCGGCCCGCTCCCTGGGGCATCTTCCCAGCCCTATGTTTCCGGAAAACTTGGCCGAGGGGGAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS GCA 90 bp GACAGCGCAGGTCCCTGCCCCGCCTCAGCTTCTCCTTGCACCGCCTaGCTCCACTTCCCCCAGTCCGACAGCATCCAGGCAGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: DSAGPCPASASPCTA*LHFPQSDSIQAAGR
Trigger: CCTGCCGGCTGCCTGGATGCTGTCGGACTGGGGGAAGTGGAGGCAGGCGGTGCAAGGAGAAGCTGAGGCGGGGCAGGGACCTGCGCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 90 bp GTGAGGGCGGTGGGGGCGGAGGCGTGCCCTCCCGCTTTAGGAGCTTaGCCTCCCGACGCAGGTAGTCCTCCTGTGCCTCCACGTAGGACC +
Preference number: 5 (lower is better)
Translates to: VRAVGAEACPPALGA*PPDAGSPPVPPRRT
Trigger: GGTCCTACGTGGAGGCACAGGAGGACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGGAGGGCACGCCTCCGCCCCCACCGCCCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS-3UTR CAA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCGCGATGGCCGACCAGTaGCGGCCGTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: RGGAWSSCFGSLAALAACAMADQ*RPCSRR
Trigger: TCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGC...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGGGGCGCCCGAGCTCTaGGCTGTGGTGGCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLGAPEL*AVVALP
Trigger: CGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCCC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGCTGGGGGAGCTGGCTaGGTGGGAGCTGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSAGGAG*VGAASS
Trigger: GGAGGACGCAGCTCCCACCAAGCCAGCTCCCCCAGC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAGGACGCTGGGGTGCTaGGCAGAGGAGATGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRTLGC*AEEMRG
Trigger: TCCCCTCATCTCCTCTGCCAAGCACCCCAGCGTCCT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTGATGGAGCCCTCCTaGAGCGGCCGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVMEPS*SGRGAR
Trigger: CCTGGCCCCGCGGCCGCTCAAGGAGGGCTCCATCAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGCGCCGGTGTCGTACTaGAGCGGGGTGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSAPVSY*SGVPCV
Trigger: CACGCAGGGCACCCCGCTCAAGTACGACACCGGCGC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGAGCGGGCTGGGGGCTaGGCGAGGAAGGCATGGCCG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQERAGG*ARKAWP
Trigger: CGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCTC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTGCTTGGGGAGCCCCTaGTCGTGGGTCAGACTGGGT +
Preference number: 5 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPCLGSP*SWVRLG
Trigger: ACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCT +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRGLPET*AFPPPP
Trigger: AGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSGVRR*QSPSEC
Trigger: GCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCT...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTCCTCCCACACGCGGTaGGTGAGCGGCGTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQSSHTR*VSGVRR
Trigger: CCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTEQSSG*GSSSQA
Trigger: CGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGGCTCCTTCCTTGGTaGGGGGAGTCGGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGLLPW*GESAAA
Trigger: GGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGGCTCCTTCCTTGGTaGGGGGAGTCGGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGLLPW*GESAAA
Trigger: GGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGCAGTCCCCGCCCCCTaGGTCCTGCGAGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAAVPAP*VLRVMG
Trigger: CCCCATCACTCGCAGGACCAAGGGGGCGGGGACTGC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS GCA 90 bp TGGCTGCTGCGGGGCATGGGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGTTGTTGCTGCTGCTGGCTCTTGCCGCGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: WLLRGMGCCCCCCCC*CCCCCCCWLLPRRR
Trigger: TCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 90 bp CCCTGGCCGGCTCTTCAGGCTCTCCTCGTAGCAGGCACGTTCCAGTaGCCGGGCGTCGGCCATCACATCCAGCGGGTGCACGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: PWPALQALLVAGTFQ*PGVGHHIQRVHGWE
Trigger: TTCCCACCCGTGCACCCGCTGGATGTGATGGCCGACGCCCGGGCACTGGAACGTGCCTGCTACGAGGAGAGCCTGAAGAGCCGGCCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 90 bp TCATCCACCTCGTCTGCACTGCAGGTAGCACTGGAGTCGCTGTCCTaGGGGGCGCCCGAGCTCTTGGCTGTGGTGGCCCTGCCGCTCCCG +
Preference number: 5 (lower is better)
Translates to: SSTSSALQVALESLS*GAPELLAVVALPLP
Trigger: CGGGAGCGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCCCCCAGGACAGCGACTCCAGTGCTACCTGCAGTGCAGACGAGGTGGATGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp GGTCCACGCCACTCACGCCCCGAAGCAGGTGCTCATAGGGCGAGATaGGGTGTGGGTGGTGCTCGGGCACGGTGCTGTGCGGGGACTTGG +
Preference number: 5 (lower is better)
Translates to: GPRHSRPEAGAHRAR*GVGGARARCCAGTW
Trigger: CCAAGTCCCCGCACAGCACCGTGCCCGAGCACCACCCACACCCCATCTCGCCCTATGAGCACCTGCTTCGGGGCGTGAGTGGCGTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 90 bp AGCGAGGACTCGCGGGGCGAGAGGCCCCTCAGCATATCAGCTCGCTaGGCCATGGCGGTGGCCGCGTTGTGGTGCATCTGCTGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: SEDSRGERPLSISAR*AMAVAALWCICCEV
Trigger: CACCTCGCAGCAGATGCACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCTGAGGGGCCTCTCGCCCCGCGAGTCCTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CCA 90 bp GCAGGGCCACTTAGCTTTCGAAGGTGCACCGTGGGTTTCTGCCACTaGGCGGCTCCAGCTGCCCAGGCAGGCCACCCGCCCACCTGTGGC +
Preference number: 5 (lower is better)
Translates to: AGPLSFRRCTVGFCH*AAPAAQAGHPPTCG
Trigger: GCCACAGGTGGGCGGGTGGCCTGCCTGGGCAGCTGGAGCCGCCCAGTGGCAGAAACCCACGGTGCACCTTCGAAAGCTAAGTGGCCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCGGGTGATGCGGCCTTaGCGTCTTCCCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRVMRP*RLPWLL
Trigger: CAACAGCCAGGGAAGACGCAAAGGCCGCATCACCCG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGCGATGGCCGACCAGTaGCGGCCGTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRAMADQ*RPCSRR
Trigger: TCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGACAGCAGCCGGTTCTaGTCGCCGCCCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQDSSRF*SPPSAS
Trigger: TGAGGCCGAGGGCGGCGACAAGAACCGGCTGCTGTC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTGGGGGAGCTGGCTaGGTGGGAGCTGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQAGGAG*VGAASS
Trigger: GGAGGACGCAGCTCCCACCAAGCCAGCTCCCCCAGC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCAGGACGCTGGGGTGCTaGGCAGAGGAGATGAGGGGA +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRRTLGC*AEEMRG
Trigger: TCCCCTCATCTCCTCTGCCAAGCACCCCAGCGTCCT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCACCGGGGCCTaGGCATGCTCTGAGTACGGG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGPTGA*ACSEYG
Trigger: CCCGTACTCAGAGCATGCCAAGGCCCCGGTGGGCCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGTGATGGAGCCCTCCTaGAGCGGCCGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLVMEPS*SGRGAR
Trigger: CCTGGCCCCGCGGCCGCTCAAGGAGGGCTCCATCAC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCGCCGGTGTCGTACTaGAGCGGGGTGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQAPVSY*SGVPCV
Trigger: CACGCAGGGCACCCCGCTCAAGTACGACACCGGCGC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGAGCGGGCTGGGGGCTaGGCGAGGAAGGCATGGCCG +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWERAGG*ARKAWP
Trigger: CGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCTC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCTCTGGAGACCTCTaGCCCCCTTCGCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQGSGDL*PPSLWG
Trigger: CCCCCACAGCGAAGGGGGCAAGAGGTCTCCAGAGCC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGCTCTGGAGACCTCTaGCCCCCTTCGCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGSGDL*PPSLWG
Trigger: CCCCCACAGCGAAGGGGGCAAGAGGTCTCCAGAGCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGGCTCTGGAGACCTCTaGCCCCCTTCGCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSGSGDL*PPSLWG
Trigger: CCCCCACAGCGAAGGGGGCAAGAGGTCTCCAGAGCC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGTGTTGCCTGGAGACTaGGAGCCCATCCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRVLPGD*EPILLG
Trigger: GCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACAC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGCCTCCAGCCCCATGTaGGTGCTGGCATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRASSPM*VLACSC
Trigger: GCAGGAACATGCCAGCACCAACATGGGGCTGGAGGC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCGTGGTCATCCTGCTTaGGGTCCCTGGCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSRGHPA*GPWPPW
Trigger: CCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCAGTCCCCGCCCCCTaGGTCCTGCGAGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQAVPAP*VLRVMG
Trigger: CCCCATCACTCGCAGGACCAAGGGGGCGGGGACTGC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGTGTCGGAGGGCTGGTaGTACAGCGGCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRVSEGW*YSGSST
Trigger: GGTGGAGCTGCCGCTGTACAACCAGCCCTCCGACAC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCC +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGLPET*AFPPPP
Trigger: GGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404621.5
CDS CCA 90 bp CGCCCAGGGTGGCTGGGGGCTTGGGCCCATTCTGCCCTGTGTCCTTaGCGGCCTCAGTGTGAGGAGAGGGGATGCTCTCGGTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RPGWLGAWAHSALCP*RPQCEERGCSRCLS
Trigger: GCTCAGACACCGAGAGCATCCCCTCTCCTCACACTGAGGCCGCCAAGGACACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCCTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000448614.1
ENST00000458234.5
CDS CCA 90 bp ATGGCAGCCGCTCGCTGCTTCAGCTGCTTCAGGTCCAGTGGCTTCTaGGGTGAGGCATTGGCCCGGGGGTCGCCAGTCGGGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: MAAARCFSCFRSSGF*GEALARGSPVGVRR
Trigger: CCTCCTCACCCCGACTGGCGACCCCCGGGCCAATGCCTCACCCCAGAAGCCACTGGACCTGAAGCAGCTGAAGCAGCGAGCGGCTGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp CCGCGCTTCGGTGGCAAAGCCCCTCGACGTAAACCACCCGGGAGGTaGTTTCTGGCTAGGGCCTCTGCACCCTCACGGGGGATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PRFGGKAPRRKPPGR*FLARASAPSRGMPG
Trigger: CCCTGGCATCCCCCGTGAGGGTGCAGAGGCCCTAGCCAGAAACCACCTCCCGGGTGGTTTACGTCGAGGGGCTTTGCCACCGAAGCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494460.1
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGCAGTTTTGCGGCCTTaGGAGGCCACAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRAVLRP*EATASF
Trigger: GAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGCGATGGCCGACCAGTaGCGGCCGTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAAMADQ*RPCSRR
Trigger: TCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCACTGCGACACAGTCTaGGAGCCCACCATCCGGGCG +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQHCDTV*EPTIRA
Trigger: CGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGTG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTTCCTCCTTCTCCTCCTaGGGGACCACAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRSSFSS*GTTGGG
Trigger: ACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGGA...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTGCACTCGCTCTaGACGGGCTCCTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSVHSL*TGSSAF
Trigger: GAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGGA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGG +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRGDGTY*PLEDAG
Trigger: CCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGGGCCCACCGGGGCCTaGGCATGCTCTGAGTACGGG +
Preference number: 5 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLGPTGA*ACSEYG
Trigger: CCCGTACTCAGAGCATGCCAAGGCCCCGGTGGGCCC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGGCCCACCGGGGCCTaGGCATGCTCTGAGTACGGG +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVGPTGA*ACSEYG
Trigger: CCCGTACTCAGAGCATGCCAAGGCCCCGGTGGGCCC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCTGGTGATGGTGCCCTaGTACAGGACGTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: RGGAWSSCFGSLAALAACLVMVP*YRTSAG
Trigger: GCCAGCTGACGTCCTGTACAAGGGCACCATCACCAG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGTGCTGTGCGGGGACTaGGCGATCTCACGAGGCGTC +
Preference number: 5 (lower is better)
Translates to: DRACVHLSRALSGMGGGGVLCGD*AISRGV
Trigger: GACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCAC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGGCTGGCTGGTGTaGCCTGGAGACTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRGGWLV*PGDLEP
Trigger: GGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGTCCTCCCACACGCGGTaGGTGAGCGGCGTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: SESVSYCEQSSGLGSSSQSSHTR*VSGVRR
Trigger: CCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGA...CTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGGGCTCCTTCCTTGGTaGGGGGAGTCGGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWGLLPW*GESAAA
Trigger: GGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTGTCGGAGGGCTGGTaGTACAGCGGCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVSEGW*YSGSST
Trigger: GGTGGAGCTGCCGCTGTACAACCAGCCCTCCGACAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGCCCGCCGCCGGGGGTaGTTCTCGATGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHARRRG*FSMRST
Trigger: GGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp GGGCAGCCCCATGGTGACAGGGCCCACCGGGGCCTTGGCATGCTCTaGGTACGGGACGTGGAGCTGGACCGACATTCCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: GQPHGDRAHRGLGML*VRDVELDRHSLGDG
Trigger: GCCATCTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCCCCGGTGGGCCCTGTCACCATGGGGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000536195.1
CDS TCA 90 bp GTGATGACCTCACTGATGTGCTGGGCCAGGGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCGGTCTGGAGCAGCGGGCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: VMTSLMCWARVTTRW*PLTPGAVWSSGLDE
Trigger: CTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACATCAGTGAGGTCATCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp CGCGTAGTTACACTGATGTGCTGGGCCAGGGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCGGTCTGGAGCAGCGGGCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: RVVTLMCWARVTTRW*PLTPGAVWSSGLDE
Trigger: CTCGTCCAGCCCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACATCAGTGTAACTACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 90 bp GGTGGGAACGTCCGGCCGGGGCTGCCGATGAGGGAGCGTACGTCGTaGTTTTTGGAGCCAGTGGTGGACGCGCCGGTGTCGTACTTGAGC +
Preference number: 5 (lower is better)
Translates to: GGNVRPGLPMRERTS*FLEPVVDAPVSYLS
Trigger: GCTCAAGTACGACACCGGCGCGTCCACCACTGGCTCCAAAAAGCACGACGTACGCTCCCTCATCGGCAGCCCCGGCCGGACGTTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp CTTGGCGATCTCACGAGGCGTCGACGTCAGCTTTCGGTCCTGGGATaGCTTGCTGGACGAAAGGCTGCCCTCCTGCAGGCGCGGCGTGGG +
Preference number: 5 (lower is better)
Translates to: LGDLTRRRRQLSVLG*LAGRKAALLQARRG
Trigger: CCCACGCCGCGCCTGCAGGAGGGCAGCCTTTCGTCCAGCAAGGCATCCCAGGACCGAAAGCTGACGTCGACGCCTCGTGAGATCGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp AGATGCAAGAGCCAGACCCAGCTCCTCCTCGACAGCGCAGGTCCCTaGCCCGCCTCAGCTTCTCCTTGCACCGCCTGCCTCCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: RCKSQTQLLLDSAGP*PASASPCTACLHFP
Trigger: GGGGAAGTGGAGGCAGGCGGTGCAAGGAGAAGCTGAGGCGGGGCAGGGACCTGCGCTGTCGAGGAGGAGCTGGGTCTGGCTCTTGCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 90 bp CCATCTCCTCATCCTCCACCACGGGCGGGAATGCAGCCTCCTCGCTaGCCGCCGCCGGCGCTTTCTTCTTCTTCCTCCGCGCGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PSPHPPPRAGMQPPR*PPPALSSSSSARSS
Trigger: AGAGGAACGCGCGGAGGAAGAAGAAGAAAGCGCCGGCGGCGGCCAGCGAGGAGGCTGCATTCCCGCCCGTGGTGGAGGATGAGGAGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000448614.1
ENST00000458234.5
CDS CCA 90 bp TTTACTTTGAGTCTTTTCCCGGTGCGGGTCCGAGGCCGAGGCAGGTaGCGCCGGCGGGTCCGGGCTGGCGTGGTGAGGTGCGAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: FTLSLFPVRVRGRGR*RRRVRAGVVRCEVL
Trigger: AAGAACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGGCGCCACCTGCCTCGGCCTCGGACCCGCACCGGGAAAAGACTCAAAGTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGAGGGTGGCTGGGGGCTaGGGCCCATTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWRVAGG*GPFCPV
Trigger: CACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCCT...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGGGCGCCCGAGCTCTaGGCTGTGGTGGCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGAPEL*AVVALP
Trigger: CGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGCTGGGGGAGCTGGCTaGGTGGGAGCTGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARAGGAG*VGAASS
Trigger: GGAGGACGCAGCTCCCACCAAGCCAGCTCCCCCAGC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGCCGGGCTCCTGCTCTaGCCCCGGGGGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNAGLLL*PRGLLP
Trigger: TGGCAGCAGCCCCCGGGGCAAGAGCAGGAGCCCGGC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGGGCCCACCGGGGCCTaGGCATGCTCTGAGTACGGG +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARGPTGA*ACSEYG
Trigger: CCCGTACTCAGAGCATGCCAAGGCCCCGGTGGGCCC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTGCTGTGCGGGGACTaGGCGATCTCACGAGGCGTC +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVLCGD*AISRGV
Trigger: GACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGATGGCGGTGGCCGCGTaGTGGTGCATCTGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQMAVAA*WCICCE
Trigger: CTCGCAGCAGATGCACCACAACGCGGCCACCGCCAT...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCAGGCAGGTGTGGCACTaGGGACAGGTCGATGATGCC +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRRQVWH*GQVDDA
Trigger: GGCATCATCGACCTGTCCCAAGTGCCACACCTGCCT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTGCTTGGGGAGCCCCTaGTCGTGGGTCAGACTGGGT +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSACLGSP*SWVRLG
Trigger: ACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGAGCTCTTCCAGGTGCTaGGGGAGCCCCTTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSSSRC*GSPLSW
Trigger: CCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGAGCTCTTCCAGGTGCTaGGGGAGCCCCTTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: DRACVHLSRALSGMGGGGSSSRC*GSPLSW
Trigger: CCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCT...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCCTCCAGGTGGCTCTaGTCGAGCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPSRWL*SSSSRC
Trigger: GCACCTGGAAGAGCTCGACAAGAGCCACCTGGAGGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCAGACCGACGTCTTGTTaGGCTCTGGAGACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPRPTSC*ALETSC
Trigger: GCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTCT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTGTTGCCTGGAGACTaGGAGCCCATCCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVLPGD*EPILLG
Trigger: GCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGTGTTGCCTGGAGACTaGGAGCCCATCCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQVLPGD*EPILLG
Trigger: GCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACAC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGCCTCCAGCCCCATGTaGGTGCTGGCATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGASSPM*VLACSC
Trigger: GCAGGAACATGCCAGCACCAACATGGGGCTGGAGGC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWEQSSG*GSSSQA
Trigger: CGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSGAPS*VGGVGS
Trigger: GCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGCGTGGTCATCCTGCTTaGGGTCCCTGGCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWRGHPA*GPWPPW
Trigger: CCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACG...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCCCCACCTGGCCTGACTaGGTTTCCAGCAATCTCGTT +
Preference number: 5 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPPTWPD*VSSNLV
Trigger: AACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGG...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGACACCGGTTCCAGCTaGCCCGTCAGGCTACGGTCC +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQDTGSS*PVRLRS
Trigger: GGACCGTAGCCTGACGGGCAAGCTGGAACCGGTGTC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp AGGTTCTCCTGCTCTGAGAGGCCATCGATGATCTCTGACACCTCGTaGTCGCTGCGGGCGGCCGACATGGACAGCCCACTGCCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RFSCSERPSMISDTS*SLRAADMDSPLPRW
Trigger: CCAGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAGAGCAGGAGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp CCTTGTGTGATGGACCCGCGGATGTGGTGCTGCTCTTTGAGGTGGTaGGGGCTGTGTCGCTCCGGCGGGATGGCACGGCCCATGAGACCT +
Preference number: 5 (lower is better)
Translates to: PCVMDPRMWCCSLRW*GLCRSGGMARPMRP
Trigger: AGGTCTCATGGGCCGTGCCATCCCGCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCAGCACCACATCCGCGGGTCCATCACACAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000473999.2
CDS CCA 90 bp GCAGCTCCCCCTCCAGGTGGCTCTTGTCGAGCTCTTCCAGGTGCTTaGGGAGCCCCTTGTCGTGGGTCAGACTGGGTGAGCTCACAGGGC +
Preference number: 5 (lower is better)
Translates to: AAPPPGGSCRALPGA*GAPCRGSDWVSSQG
Trigger: GCCCTGTGAGCTCACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGACAAGAGCCACCTGGAGGGGGAGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS CCA 90 bp CCCATCCCGGTACAGCAGCGGGTACACAGCACTCCGGGAGTGCCCTaGCTCCGTCATGCCCTCCGGTGGGGACACAGGTTCAATACCGTC +
Preference number: 5 (lower is better)
Translates to: PIPVQQRVHSTPGVP*LRHALRWGHRFNTV
Trigger: GACGGTATTGAACCTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGTGCTGTGTACCCGCTGCTGTACCGGGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CCA 90 bp CCCGCTCTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTGTTGGACCTCCTCGGGGACCCGCAG +
Preference number: 5 (lower is better)
Translates to: PALDPGLAPARTRTW*LVLSSVLDLLGDPQ
Trigger: CTGCGGGTCCCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAGAGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS CCA 90 bp GGTCCCGCTCTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGTGTGTTGGACCTCCTCGGGGACCCG +
Preference number: 5 (lower is better)
Translates to: GPALDPGLAPARTRT*WLVLSSVLDLLGDP
Trigger: CGGGTCCCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAGAGCGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS CCA 90 bp TGGACAGGGAGGCAGCAACTCTCTCCTCACCGTTCATTCCCGGGCTaGAACTCAGACAGCAGGGAGGGCCTCCGCCGCTGGGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: WTGRQQLSPHRSFPG*NSDSREGLRRWGWM
Trigger: CATCCAGCCCCAGCGGCGGAGGCCCTCCCTGCTGTCTGAGTTCCAGCCCGGGAATGAACGGTGAGGAGAGAGTTGCTGCCTCCCTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542565.1
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCGTCTTCCCTGGCTGTaGGCAGTTTTGCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTRLPWL*AVLRPL
Trigger: CAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTATGGCCTCCTCGCTGTaGGCCTCATTAGCCATTGAG +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRMASSL*ASLAIE
Trigger: CTCAATGGCTAATGAGGCCAACAGCGAGGAGGCCAT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGCGATGGCCGACCAGTaGCGGCCGTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWAMADQ*RPCSRR
Trigger: TCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGCACTGCGACACAGTCTaGGAGCCCACCATCCGGGCG +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWHCDTV*EPTIRA
Trigger: CGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGTG...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGAGGGTGGCTGGGGGCTaGGGCCCATTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALRVAGG*GPFCPV
Trigger: CACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCCT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTCCTCCTTCTCCTCCTaGGGGACCACAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSASSFSS*GTTGGG
Trigger: ACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGGA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAGGACGCTGGGGTGCTaGGCAGAGGAGATGAGGGGA +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPRTLGC*AEEMRG
Trigger: TCCCCTCATCTCCTCTGCCAAGCACCCCAGCGTCCT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGAGGACGCTGGGGTGCTaGGCAGAGGAGATGAGGGGA +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQRTLGC*AEEMRG
Trigger: TCCCCTCATCTCCTCTGCCAAGCACCCCAGCGTCCT...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGG +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQGDGTY*PLEDAG
Trigger: CCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCC...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGG +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAGDGTY*PLEDAG
Trigger: CCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCC...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCGTGCTGGGAATGCCTTaGGTGATGCTTCCGCCCGGA +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGVLGMP*VMLPPG
Trigger: TCCGGGCGGAAGCATCACCAAAGGCATTCCCAGCAC...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTGCTGGGAATGCCTTaGGTGATGCTTCCGCCCGGA +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVLGMP*VMLPPG
Trigger: TCCGGGCGGAAGCATCACCAAAGGCATTCCCAGCAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGACCGAGGGATCCCTaGTGTGATGGACCCGCGGAT +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQGPRDP*CDGPAD
Trigger: ATCCGCGGGTCCATCACACAAGGGATCCCTCGGTCC...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGACCGAGGGATCCCTaGTGTGATGGACCCGCGGAT +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRGPRDP*CDGPAD
Trigger: ATCCGCGGGTCCATCACACAAGGGATCCCTCGGTCC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGTGATGGAGCCCTCCTaGAGCGGCCGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGVMEPS*SGRGAR
Trigger: CCTGGCCCCGCGGCCGCTCAAGGAGGGCTCCATCAC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGTGCTGTGCGGGGACTaGGCGATCTCACGAGGCGTC +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVVLCGD*AISRGV
Trigger: GACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCAC...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGATGGCGGTGGCCGCGTaGTGGTGCATCTGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWMAVAA*WCICCE
Trigger: CTCGCAGCAGATGCACCACAACGCGGCCACCGCCAT...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCAGGCAGGTGTGGCACTaGGGACAGGTCGATGATGCC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSRQVWH*GQVDDA
Trigger: GGCATCATCGACCTGTCCCAAGTGCCACACCTGCCT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGAGGCAGGTGTGGCACTaGGGACAGGTCGATGATGCC +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQRQVWH*GQVDDA
Trigger: GGCATCATCGACCTGTCCCAAGTGCCACACCTGCCT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCTTGGGGAGCCCCTaGTCGTGGGTCAGACTGGGT +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPCLGSP*SWVRLG
Trigger: ACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGCTTGGGGAGCCCCTaGTCGTGGGTCAGACTGGGT +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRCLGSP*SWVRLG
Trigger: ACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAGCTCTTCCAGGTGCTaGGGGAGCCCCTTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPSSSRC*GSPLSW
Trigger: CCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTTGCTCTCGGTCAGCTaGCTGAAGAAGGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGLLSVS*LKKAGG
Trigger: GCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTTGCTCTCGGTCAGCTaGCTGAAGAAGGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQLLSVS*LKKAGG
Trigger: GCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTTGACCATGGCGGAGTaGCTCTCGGTCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTLTMAE*LSVSLL
Trigger: CAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTVMAGI*KISVPG
Trigger: GCCTGGGACGGAGATCTTCAATATGCCCGCCATCAC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCCTCCAGCCCCATGTaGGTGCTGGCATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRASSPM*VLACSC
Trigger: GCAGGAACATGCCAGCACCAACATGGGGCTGGAGGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGAGAGGGTTAAAAGCATaGGCGCTGAGCGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQRGLKA*ALSGGD
Trigger: GTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSGVRR*QSPSEC
Trigger: GCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCGTGGTCATCCTGCTTaGGGTCCCTGGCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALRGHPA*GPWPPW
Trigger: CCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGCCCGCCGCCGGGGGTaGTTCTCGATGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGARRRG*FSMRST
Trigger: GGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCATGACCTGGCGGTCTTaGTACACCTTCATGGGGTCG +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRMTWRS*YTFMGS
Trigger: CGACCCCATGAAGGTGTACAAAGACCGCCAGGTCAT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp TGCCACCCTCATAGGACAAGACGTGGCCCTTCTTGCCTTCGTAGATaGCGTGGCCCTTGGGCAGGCTGTCCTCCCGGCCGCGGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: CHPHRTRRGPSCLRR*RGPWAGCPPGRGPS
Trigger: GCTTGGACCGCGGCCGGGAGGACAGCCTGCCCAAGGGCCACGTCATCTACGAAGGCAAGAAGGGCCACGTCTTGTCCTATGAGGGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 90 bp ACTGGGTCACAGACATGCCACCTGGAAACCACACAAAGCACTCGGTaGGGAGCTGGGCACGGGCCCAGGACCACGGTGGGCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TGSQTCHLETTQSTR*GAGHGPRTTVGRQD
Trigger: GTCCTGCCTGCCCACCGTGGTCCTGGGCCCGTGCCCAGCTCCTCACCGAGTGCTTTGTGTGGTTTCCAGGTGGCATGTCTGTGACCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS GCA 90 bp ACAGCAGCGGGTACACAGCACTCCGGGAGTGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAGGTTCAATACCGTCCTCACCACCAC +
Preference number: 5 (lower is better)
Translates to: TAAGTQHSGSALAPS*PPVGTQVQYRPHHH
Trigger: GTGGTGGTGAGGACGGTATTGAACCTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGTGCTGTGTACCCGCTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS GCA 90 bp GGGAACAGGGCAGTACCTTGTGTGATGGACCCGCGGATGTGGTGCTaGTCTTTGAGGTGGTGGGGGCTGTGTCGCTCCGGCGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: GNRAVPCVMDPRMWC*SLRWWGLCRSGGMA
Trigger: TGCCATCCCGCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCAGCACCACATCCGCGGGTCCATCACACAAGGTACTGCCCTGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 90 bp CCCGCTCTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTGTTGGACCTCCTGGGGAGAGTGGGG +
Preference number: 5 (lower is better)
Translates to: PALDPGLAPARTRTW*LVLSSVLDLLGRVG
Trigger: CCCCACTCTCCCCAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAGAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CCA 90 bp CGCTGCTGGTCAGCGTCGTACAGCATGGGCGGGATCACGGCCAGCTaGCGCATCTGCTTCTCCAGGTTCTCCTGCTCTGAGAGGCCATCG +
Preference number: 5 (lower is better)
Translates to: RCWSASYSMGGITAS*RICFSRFSCSERPS
Trigger: CGATGGCCTCTCAGAGCAGGAGAACCTGGAGAAGCAGATGCGCCAGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp ACAGACATGCCACCTGGAAACCACACAAAGCACTCGGTGAGGAGCTaGGCACGGGCCCAGGACCACGGTGGGCAGGCAGGACAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TDMPPGNHTKHSVRS*ARAQDHGGQAGQAE
Trigger: CTCTGCCTGTCCTGCCTGCCCACCGTGGTCCTGGGCCCGTGCCCAGCTCCTCACCGAGTGCTTTGTGTGGTTTCCAGGTGGCATGTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTGGCTGTTGGCAGTTTaGCGGCCTTTGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQWLLAV*RPLEAT
Trigger: TGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCCGTCTTCCCTGGCTGTaGGCAGTTTTGCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSRLPWL*AVLRPL
Trigger: CAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACG...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCACTGCGACACAGTCTaGGAGCCCACCATCCGGGCG +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARHCDTV*EPTIRA
Trigger: CGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGTG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCGTGCACTCGCTCTaGACGGGCTCCTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHSVHSL*TGSSAF
Trigger: GAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGGA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGCCGGGCTCCTGCTCTaGCCCCGGGGGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQAGLLL*PRGLLP
Trigger: TGGCAGCAGCCCCCGGGGCAAGAGCAGGAGCCCGGC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCTGGACCGACATTCCTaGGGAGATGGCACCTATTTG +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRLDRHS*GDGTYL
Trigger: CAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTGCTGGGAATGCCTTaGGTGATGCTTCCGCCCGGA +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVLGMP*VMLPPG
Trigger: TCCGGGCGGAAGCATCACCAAAGGCATTCCCAGCAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGCTTCTGCCGTCCTCCTaGGAGCACTGGGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRLLPSS*EHWVTD
Trigger: GTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAAG...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGATGGCGGTGGCCGCGTaGTGGTGCATCTGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALMAVAA*WCICCE
Trigger: CTCGCAGCAGATGCACCACAACGCGGCCACCGCCAT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCACGTGGTGGTTGGTTTaGTCAAGTGTGTTGGACCTC +
Preference number: 5 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPTWWLV*SSVLDL
Trigger: GAGGTCCAACACACTTGACAAAACCAACCACCACGT...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGAGACCGACGTCTTGTTaGGCTCTGGAGACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTRPTSC*ALETSC
Trigger: GCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTCT...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCCCAAGACCGACGTCTaGTTTGGCTCTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQPKTDV*FGSGDL
Trigger: GAGGTCTCCAGAGCCAAACAAGACGTCGGTCTTGGG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCCCCAAGACCGACGTCTaGTTTGGCTCTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGPKTDV*FGSGDL
Trigger: GAGGTCTCCAGAGCCAAACAAGACGTCGGTCTTGGG...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGTGTTGCCTGGAGACTaGGAGCCCATCCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWVLPGD*EPILLG
Trigger: GCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACAC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGCGGCTGGCTGGTGTaGCCTGGAGACTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTGGWLV*PGDLEP
Trigger: GGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCC...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCCCAGGCTGGCTGATATaGTATTCAGGCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: RGGAWSSCFGSLAALAACPGWLI*YSGSFR
Trigger: CCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTCCAGGCTGGCTGATATaGTATTCAGGCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRPGWLI*YSGSFR
Trigger: CCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCAGGCTGGCTGATATaGTATTCAGGCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRPGWLI*YSGSFR
Trigger: CCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGAGAGGGTTAAAAGCATaGGCGCTGAGCGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRRGLKA*ALSGGD
Trigger: GTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCT...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCAGAGGGTTAAAAGCATaGGCGCTGAGCGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPRGLKA*ALSGGD
Trigger: GTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCT...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLASGVRR*QSPSEC
Trigger: GCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGGCTCCTTCCTTGGTaGGGGGAGTCGGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGLLPW*GESAAA
Trigger: GGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCCACCTGGCCTGACTaGGTTTCCAGCAATCTCGTT +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRPTWPD*VSSNLV
Trigger: AACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGG...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCGCCTGCACACGCCTCTaGAACGGTAAGCAGAGATCA +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRACTRL*NGKQRS
Trigger: TGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGC...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGGACACCGGTTCCAGCTaGCCCGTCAGGCTACGGTCC +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARDTGSS*PVRLRS
Trigger: GGACCGTAGCCTGACGGGCAAGCTGGAACCGGTGTC...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp CTGCTCGCCCCTGCAGGCCTGGGACGGGTACCTCAATACCCACCTTaGTTCCACCCGCGCTTCGGTGGCAAAGCCCCTCGACGTAAACCA +
Preference number: 5 (lower is better)
Translates to: LLAPAGLGRVPQYPP*FHPRFGGKAPRRKP
Trigger: TGGTTTACGTCGAGGGGCTTTGCCACCGAAGCGCGGGTGGAATCAAGGTGGGTATTGAGGTACCCGTCCCAGGCCTGCAGGGGCGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494460.1
CDS GCA 90 bp CTGCTGCCGCTGCTCTGCTCTGTACCAGGTCTCCAGATGGGTGCGTaGTCCACCGTCGTGGTGGACGTGAGGATGGACTTTTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LLPLLCSVPGLQMGA*STVVVDVRMDFSRS
Trigger: GGAGCGGGAAAAGTCCATCCTCACGTCCACCACGACGGTGGAGCACGCACCCATCTGGAGACCTGGTACAGAGCAGAGCAGCGGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440187.5
ENST00000453428.1
CDS GCA 90 bp GCTTGCGGATCTCAGGGAACTGCTTCTCGTAGTACTCGCGCACCTTaGTCTCCTTGGCCCGCCGCCGGGGGTTGTTCTCGATGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: ACGSQGTASRSTRAP*SPWPAAGGCSRCAP
Trigger: TGGAGCGCATCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACTACGAGAAGCAGTTCCCTGAGATCCGCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS GCA 90 bp GGGAAGCAGAGTGGGGCGTTCATACCCAGCAACCACGTCAATGGGTaGAAAGCCACACAGGTGCTGAGTGTGGGAGGCGCCCGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GKQSGAFIPSNHVNG*KATQVLSVGGARPL
Trigger: CAAGGGCCGGGCGCCTCCCACACTCAGCACCTGTGTGGCTTTGCACCCATTGACGTGGTTGCTGGGTATGAACGCCCCACTCTGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 90 bp GATGCAGGGCACGCTGCCTGCACCCTGTACCCTAGCCCTCCAGGGTaGTCTGTCTGCAAGCAAGGGTGTGCCTGTGACCACATGAGCACG +
Preference number: 5 (lower is better)
Translates to: DAGHAACTLYPSPPG*SVCKQGCACDHMST
Trigger: CGTGCTCATGTGGTCACAGGCACACCCTTGCTTGCAGACAGAGCACCCTGGAGGGCTAGGGTACAGGGTGCAGGCAGCGTGCCCTGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 90 bp GGTCCCGCTCTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGTGTGTTGGACCTCCTGGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GPALDPGLAPARTRT*WLVLSSVLDLLGRV
Trigger: CACTCTCCCCAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAGAGCGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CCA 90 bp CTCGGTCAGCTTGCTGAAGAAGGCTGGCGGCTGGCTGGTGTTGCCTaGAGACTTGGAGCCCATCCTGCTGGGCTCCGTCTGTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: LGQLAEEGWRLAGVA*RLGAHPAGLRLFPI
Trigger: GATGGGGAACAGACGGAGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000461081.2
CDS CCA 90 bp ATGGCGGAGTTGCTCTCGGTCAGCTTGCTGAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGACTTGGAGCCCATCCTGCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: MAELLSVSLLKKAGG*LVLPGDLEPILLGS
Trigger: GGAGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000461081.2
CDS CCA 90 bp ATGGCGGAGTTGCTCTCGGTCAGCTTGCTGAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGACTTGGAGCCCATCCTGGGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: MAELLSVSLLKKAGG*LVLPGDLEPILGSV
Trigger: GACGGAGCCCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443451.6
CDS CCA 90 bp CTCTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTGGTTaGTTTTGTCAAGTGTGTTGGACCTCCTCGGGGACCCGCAGCGTA +
Preference number: 5 (lower is better)
Translates to: LSIPVSLPLGRGRGG*FCQVCWTSSGTRSV
Trigger: TACGCTGCGGGTCCCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGTCGTCTGTCTTCTCCTaGAGGAGGTCTTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTSSVFS*RRSSLS
Trigger: CGACAAGGAAGACCTCCTCAAGGAGAAGACAGACGA...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCAGTTTTGCGGCCTTaGGAGGCCACAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLAVLRP*EATASF
Trigger: GAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTGGCTGTTGGCAGTTTaGCGGCCTTTGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRWLLAV*RPLEAT
Trigger: TGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCGTCTTCCCTGGCTGTaGGCAGTTTTGCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPRLPWL*AVLRPL
Trigger: CAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCGGGTGATGCGGCCTTaGCGTCTTCCCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHRVMRP*RLPWLL
Trigger: CAACAGCCAGGGAAGACGCAAAGGCCGCATCACCCG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTAGGGTGGCTGGGGGCTaGGGCCCATTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLARVAGG*GPFCPV
Trigger: CACAGGGCAGAATGGGCCCAAGCCCCCAGCCACCCT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGGGCGCCCGAGCTCTaGGCTGTGGTGGCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGGAPEL*AVVALP
Trigger: CGGCAGGGCCACCACAGCCAAGAGCTCGGGCGCCCC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGACAGCAGCCGGTTCTaGTCGCCGCCCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGDSSRF*SPPSAS
Trigger: TGAGGCCGAGGGCGGCGACAAGAACCGGCTGCTGTC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGG +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLGDGTY*PLEDAG
Trigger: CCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCC...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTGCTGGGAATGCCTTaGGTGATGCTTCCGCCCGGA +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVLGMP*VMLPPG
Trigger: TCCGGGCGGAAGCATCACCAAAGGCATTCCCAGCAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGCTGGTGATGGTGCCCTaGTACAGGACGTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLVMVP*YRTSAG
Trigger: GCCAGCTGACGTCCTGTACAAGGGCACCATCACCAG...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCTGGTGATGGTGCCCTaGTACAGGACGTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVLVMVP*YRTSAG
Trigger: GCCAGCTGACGTCCTGTACAAGGGCACCATCACCAG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCCCTGGCCGCCTGCACGTGGTGGTTGGTTTaGTCAAGTGTGTTGGACCTC +
Preference number: 5 (lower is better)
Translates to: RGGAWSSCFGSLAALAACTWWLV*SSVLDL
Trigger: GAGGTCCAACACACTTGACAAAACCAACCACCACGT...GCAGGCGGCCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCACGTGGTGGTTGGTTTaGTCAAGTGTGTTGGACCTC +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRTWWLV*SSVLDL
Trigger: GAGGTCCAACACACTTGACAAAACCAACCACCACGT...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGAGCGGGCTGGGGGCTaGGCGAGGAAGGCATGGCCG +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQERAGG*ARKAWP
Trigger: CGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCTC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGAGCGGGCTGGGGGCTaGGCGAGGAAGGCATGGCCG +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDERAGG*ARKAWP
Trigger: CGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCTC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGAGCGGGCTGGGGGCTaGGCGAGGAAGGCATGGCCG +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAERAGG*ARKAWP
Trigger: CGGCCATGCCTTCCTCGCCAAGCCCCCAGCCCGCTC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGGAAAAGGGTTTACTTaGAGTCTTTTCCCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRGKGFT*SLFPVR
Trigger: CCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCCCTCCAGGTGGCTCTaGTCGAGCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARPSRWL*SSSSRC
Trigger: GCACCTGGAAGAGCTCGACAAGAGCCACCTGGAGGG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGCTCTGGAGACCTCTaGCCCCCTTCGCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAGSGDL*PPSLWG
Trigger: CCCCCACAGCGAAGGGGGCAAGAGGTCTCCAGAGCC...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCCCCAAGACCGACGTCTaGTTTGGCTCTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPPKTDV*FGSGDL
Trigger: GAGGTCTCCAGAGCCAAACAAGACGTCGGTCTTGGG...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGTTGCTCTCGGTCAGCTaGCTGAAGAAGGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLLLSVS*LKKAGG
Trigger: GCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAA...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTTGACCATGGCGGAGTaGCTCTCGGTCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRLTMAE*LSVSLL
Trigger: CAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTCAGGCTCATTCCGGTaGTGGGTGTTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRSGSFR*WVFSFL
Trigger: CAAGAAGCTGAACACCCACAACCGGAATGAGCCTGA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGAGAGGGTTAAAAGCATaGGCGCTGAGCGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLRGLKA*ALSGGD
Trigger: GTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTCCTCCCACACGCGGTaGGTGAGCGGCGTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASSHTR*VSGVRR
Trigger: CCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTCCTCCCACACGCGGTaGGTGAGCGGCGTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESSHTR*VSGVRR
Trigger: CCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGAGCAGAGCAGTGGCTaGGGCTCCTCGTCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGEQSSG*GSSSQA
Trigger: CGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACGTGGTCATCCTGCTTaGGGTCCCTGGCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGRGHPA*GPWPPW
Trigger: CCAGGGCGGCCAGGGACCCAAAGCAGGATGACCACG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGTTTCCAGCAATCTCGTaGGCTGGGGCAGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQFPAIS*AGAVCG
Trigger: CCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTCCCACCTGGCCTGACTaGGTTTCCAGCAATCTCGTT +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAPTWPD*VSSNLV
Trigger: AACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGG...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGCCCACCTGGCCTGACTaGGTTTCCAGCAATCTCGTT +
Preference number: 5 (lower is better)
Translates to: DRACVHLSRALSGMGGGGPTWPD*VSSNLV
Trigger: AACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGG...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCGTGTCTGAGCTGTTGTaGACAGTGGCTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSVSELL*TVASAS
Trigger: GGAGGCTGAAGCCACTGTCAACAACAGCTCAGACAC...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCGGTGTCTGAGCTGTaGTTGACAGTGGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSVSEL*LTVASA
Trigger: GGCTGAAGCCACTGTCAACAACAGCTCAGACACCGA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGTCGGTGTCTGAGCTGTaGTTGACAGTGGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQSVSEL*LTVASA
Trigger: GGCTGAAGCCACTGTCAACAACAGCTCAGACACCGA...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGTCAGGCTACGGTCCTaGGTGAGGTCTTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRVRLRS*VRSSDP
Trigger: GGGATCTGAAGACCTCACCAAGGACCGTAGCCTGAC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTGAACTTCTGCTCCCATaGTTTCCGAGCGTGATTCCT +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRELLLP*FPSVIP
Trigger: AGGAATCACGCTCGGAAACAATGGGAGCAGAAGTTC...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCGAACTTCTGCTCCCATaGTTTCCGAGCGTGATTCCT +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRELLLP*FPSVIP
Trigger: AGGAATCACGCTCGGAAACAATGGGAGCAGAAGTTC...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTGCAGCTCGCGCTGCTaGCGGATCTCAGGGAACTGC +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARCSSRC*RISGNC
Trigger: GCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp GGCGCATCTGCTTCTCCAGGTTCTCCTGCTCTGAGAGGCCATCGATaGTCTCTGACACCTCGTGCTCGCTGCGGGCGGCCGACATGGACA +
Preference number: 5 (lower is better)
Translates to: GASASPGSPALRGHR*SLTPRARCGRPTWT
Trigger: TGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAGAGCAGGAGAACCTGGAGAAGCAGATGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 90 bp TCATACCCAGCAACCACGTCAATGGGTGCAAAGCCACACAGGTGCTaGGTGTGGGAGGCGCCCGGCCCTTGTGTGGGAGGGATCCAACCC +
Preference number: 5 (lower is better)
Translates to: SYPATTSMGAKPHRC*VWEAPGPCVGGIQP
Trigger: GGGTTGGATCCCTCCCACACAAGGGCCGGGCGCCTCCCACACTCAGCACCTGTGTGGCTTTGCACCCATTGACGTGGTTGCTGGGTATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 90 bp TTCTCATCTTTCTCCTCCTGGCTGCTGCGGGGCATGGGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FSSFSSWLLRGMGCC*CCCCCCCCCCCCCW
Trigger: CCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 90 bp TCCTTCTCATCTTTCTCCTCCTGGCTGCTGCGGGGCATGGGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SFSSFSSWLLRGMGC*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGAGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp TGCTGCTCTACCATGGTGATCTCTCGGTCCACGCGGTCCATGTTCTaGATCAGCTCCTCCTTGGACAGCCGTGGCGGCACCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CCSTMVISRSTRSMF*ISSSLDSRGGTSSS
Trigger: GCTGGAGCTGGTGCCGCCACGGCTGTCCAAGGAGGAGCTGATCCAGAACATGGACCGCGTGGACCGAGAGATCACCATGGTAGAGCAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CCA 90 bp GGGTCGGCCATAAGCCCGTTCATGTTGATGAACTTGATGCGCTGCTaGTCAGCGTCGTACAGCATGGGCGGGATCACGGCCAGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: GSAISPFMLMNLMRC*SASYSMGGITASWR
Trigger: GCGCCAGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp CTTGACCATGGCGGAGTTGCTCTCGGTCAGCTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCCTGGAGACTTGGAGCCCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: LDHGGVALGQLAEEG*RLAGVAWRLGAHPG
Trigger: CCCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443451.6
CDS CCA 90 bp GCTTCTGCCGTCCTCCTTGGAGCACTGGGTCACAGACATGCCACCTaGAAACCACACAAAGCACTCGGTGAGGAGCTGGGCACGGGCCCA +
Preference number: 5 (lower is better)
Translates to: ASAVLLGALGHRHAT*KPHKALGEELGTGP
Trigger: TGGGCCCGTGCCCAGCTCCTCACCGAGTGCTTTGTGTGGTTTCCAGGTGGCATGTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTGGCTGTTGGCAGTTTaGCGGCCTTTGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVWLLAV*RPLEAT
Trigger: TGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTGTCTGAGCTGTTGTaGACAGTGGCTGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVSELL*TVAGPL
Trigger: CAGTGGCCCAGCCACTGTCAACAACAGCTCAGACAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTCCTCCTTCTCCTCCTaGGGGACCACAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALSSFSS*GTTGGG
Trigger: ACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGGA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTCCTCCTTCTCCTCCTaGGGGACCACAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARSSFSS*GTTGGG
Trigger: ACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGGA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGACAGCAGCCGGTTCTaGTCGCCGCCCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTDSSRF*SPPSAS
Trigger: TGAGGCCGAGGGCGGCGACAAGAACCGGCTGCTGTC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGCTGGACCGACATTCCTaGGGAGATGGCACCTATTTG +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQLDRHS*GDGTYL
Trigger: CAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAG...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGGGCCCACCGGGGCCTaGGCATGCTCTGAGTACGGG +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQGPTGA*ACSEYG
Trigger: CCCGTACTCAGAGCATGCCAAGGCCCCGGTGGGCCC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGTGCTGGGAATGCCTTaGGTGATGCTTCCGCCCGGA +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALVLGMP*VMLPPG
Trigger: TCCGGGCGGAAGCATCACCAAAGGCATTCCCAGCAC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGCTTCTGCCGTCCTCCTaGGAGCACTGGGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALLLPSS*EHWVTD
Trigger: GTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAAG...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACCTTCTGCCGTCCTCCTaGGAGCACTGGGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHLLPSS*EHWVTD
Trigger: GTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAAG...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWMWCCS*RWWGLC
Trigger: ACACAGCCCCCACCACCTCAAAGAGCAGCACCACAT...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVMWCCS*RWWGLC
Trigger: ACACAGCCCCCACCACCTCAAAGAGCAGCACCACAT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWMWCCS*RWWGLC
Trigger: ACACAGCCCCCACCACCTCAAAGAGCAGCACCACAT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGAGGCAGGTGTGGCACTaGGGACAGGTCGATGATGCC +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALRQVWH*GQVDDA
Trigger: GGCATCATCGACCTGTCCCAAGTGCCACACCTGCCT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGGGAAAAGGGTTTACTTaGAGTCTTTTCCCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTGKGFT*SLFPVR
Trigger: CCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCC...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTCCCTCCAGGTGGCTCTaGTCGAGCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTPSRWL*SSSSRC
Trigger: GCACCTGGAAGAGCTCGACAAGAGCCACCTGGAGGG...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCCCCAAGACCGACGTCTaGTTTGGCTCTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVPKTDV*FGSGDL
Trigger: GAGGTCTCCAGAGCCAAACAAGACGTCGGTCTTGGG...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGCGGCTGGCTGGTGTaGCCTGGAGACTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTGGWLV*PGDLEP
Trigger: GGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGACCATGGCGGAGTaGCTCTCGGTCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWLTMAE*LSVSLL
Trigger: CAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAA...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGATGGAGCTGGCTTTGACCATGGCGGAGTaGCTCTCGGTCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RDWAFYPRPRVRDLMELALTMAE*LSVSLL
Trigger: CAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAA...AGCCAGCTCCATCAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSSCFLD*TMAELL
Trigger: GAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGA...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCAGGCTCATTCCGGTaGTGGGTGTTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGSGSFR*WVFSFL
Trigger: CAAGAAGCTGAACACCCACAACCGGAATGAGCCTGA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVMAGI*KISVPG
Trigger: GCCTGGGACGGAGATCTTCAATATGCCCGCCATCAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGGCGTGGTGGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: CLVLRAEQWLGLLVPGVVVMAGI*KISVPG
Trigger: GCCTGGGACGGAGATCTTCAATATGCCCGCCATCAC...CACCACGCCTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CAA 90 bp GTCACTCGCTGTCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTGCCTCCAGCCCCATGTaGGTGCTGGCATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: VTRCRRVSRTASRAVAWAASSPM*VLACSC
Trigger: GCAGGAACATGCCAGCACCAACATGGGGCTGGAGGC...AGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGACAGCGAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESGVRR*QSPSEC
Trigger: GCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATCCTCCCACACGCGGTaGGTGAGCGGCGTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSSHTR*VSGVRR
Trigger: CCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSGAPS*VGGVGS
Trigger: GCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGCCTGCACACGCCTCTaGAACGGTAAGCAGAGATCA +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRACTRL*NGKQRS
Trigger: TGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGC...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGCCCGCCGCCGGGGGTaGTTCTCGATGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGARRRG*FSMRST
Trigger: GGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTGCAGCTCGCGCTGCTaGCGGATCTCAGGGAACTGC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTCSSRC*RISGNC
Trigger: GCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGGGCCGTATCAGGCCAAAGTTCTaGGGATGCTGCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: GLLPWLGESAAALLLQGRIRPKF*GCCMNF
Trigger: GAAGTTCATGCAGCATCCCAAGAACTTTGGCCTGAT...ACGGCCCTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp GCAGGGGGTCAGGCAGCAGCTCTAGCCGAGGGCGCTTGCTTTCAATaGACTCCATCTCTGACTTCCCCAGCTCGGGCAGGTATGAGTGGG +
Preference number: 5 (lower is better)
Translates to: AGGQAAALAEGACFQ*TPSLTSPARAGMSG
Trigger: CCCACTCATACCTGCCCGAGCTGGGGAAGTCAGAGATGGAGTTCATTGAAAGCAAGCGCCCTCGGCTAGAGCTGCTGCCTGACCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS GCA 90 bp GCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTGGCTCTTaGCGCGGCGCCGATAGCTCCGTCTCACCAGGCTCTTATAGTTCT +
Preference number: 5 (lower is better)
Translates to: AAAAAAAAVVAAAGS*RGADSSVSPGSYSS
Trigger: AGAACTATAAGAGCCTGGTGAGACGGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 90 bp TTCTCCTTCTCATCTTTCTCCTCCTGGCTGCTGCGGGGCATGGGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FSFSSFSSWLLRGMG*CCCCCCCCCCCCCC
Trigger: GCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGAGAAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp TGCGGCCTTTGCGTCTTCCCTGGCTGTTGGCAGTTTTGCGGCCTTTaGAGGCCACAGCCTCCTTCTCGTCGTTGTCCTCCCCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: CGLCVFPGCWQFCGL*RPQPPSRRCPPLRC
Trigger: ACACCTCAGGGGAGGACAACGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp CTTGACCATGGCGGAGTTGCTCTCGGTCAGCTTGCTGAAGAAGGCTaGCGGCTGGCTGGTGTTGCCTGGAGACTTGGAGCCCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: LDHGGVALGQLAEEG*RLAGVAWRLGAHPA
Trigger: AGCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000461081.2
CDS CCA 90 bp TCTCAGGGAACTGCTTCTCGTAGTACTCGCGCACCTTGCTCTCCTTaGCCCGCCGCCGGGGGTTGTTCTCGATGCGCTCCACCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SQGTASRSTRAPCSP*PAAGGCSRCAPPSS
Trigger: AGAAGAAGGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACTACGAGAAGCAGTTCCCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CCA 90 bp GGGAGTGGGGCTGTGGTCAGCGGTCCCAAGCTGGTAGTTGGCAGATaGCTGATGAGACCAGCCCATGACACTGAGAAACCTGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GSGAVVSGPKLVVGR*LMRPAHDTEKPGPP
Trigger: TGGTGGCCCAGGTTTCTCAGTGTCATGGGCTGGTCTCATCAGCCATCTGCCAACTACCAGCTTGGGACCGCTGACCACAGCCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTGGCTGTTGGCAGTTTaGCGGCCTTTGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARWLLAV*RPLEAT
Trigger: TGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCGGGTGATGCGGCCTTaGCGTCTTCCCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNRVMRP*RLPWLL
Trigger: CAACAGCCAGGGAAGACGCAAAGGCCGCATCACCCG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCGGGTGATGCGGCCTTaGCGTCTTCCCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLARVMRP*RLPWLL
Trigger: CAACAGCCAGGGAAGACGCAAAGGCCGCATCACCCG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCATGGCCTCCTCGCTGTaGGCCTCATTAGCCATTGAG +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVMASSL*ASLAIE
Trigger: CTCAATGGCTAATGAGGCCAACAGCGAGGAGGCCAT...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCTTCTCCATCTTCAGCTaGTGCTGCTGCAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRFSIFS*CCCKIS
Trigger: TGAGATCTTGCAGCAGCACAAGCTGAAGATGGAGAA...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTCGGTGTCTGAGCTGTaGTTGACAGTGGCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARSVSEL*LTVAGP
Trigger: TGGCCCAGCCACTGTCAACAACAGCTCAGACACCGA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CAA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTCCGTGCACTCGCTCTaGACGGGCTCCTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSVHSL*TGSSAF
Trigger: GAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGGA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGACAGCAGCCGGTTCTaGTCGCCGCCCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGADSSRF*SPPSAS
Trigger: TGAGGCCGAGGGCGGCGACAAGAACCGGCTGCTGTC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGCTGGACCGACATTCCTaGGGAGATGGCACCTATTTG +
Preference number: 5 (lower is better)
Translates to: GKDAGSGRTDGWRRRRTQLDRHS*GDGTYL
Trigger: CAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAG...CTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHMWCCS*RWWGLC
Trigger: ACACAGCCCCCACCACCTCAAAGAGCAGCACCACAT...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGGACCGAGGGATCCCTaGTGTGATGGACCCGCGGAT +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGGPRDP*CDGPAD
Trigger: ATCCGCGGGTCCATCACACAAGGGATCCCTCGGTCC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGGACCGAGGGATCCCTaGTGTGATGGACCCGCGGAT +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNGPRDP*CDGPAD
Trigger: ATCCGCGGGTCCATCACACAAGGGATCCCTCGGTCC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGCGCCGGTGTCGTACTaGAGCGGGGTGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGAPVSY*SGVPCV
Trigger: CACGCAGGGCACCCCGCTCAAGTACGACACCGGCGC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTAGGCAGGTGTGGCACTaGGGACAGGTCGATGATGCC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTRQVWH*GQVDDA
Trigger: GGCATCATCGACCTGTCCCAAGTGCCACACCTGCCT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCGTTTTGTCAAGTGTGTaGGACCTCCTGGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPVLSSV*DLLGRV
Trigger: CACTCTCCCCAGGAGGTCCAACACACTTGACAAAAC...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCACGTGGTGGTTGGTTTaGTCAAGTGTGTTGGACCTC +
Preference number: 5 (lower is better)
Translates to: MPALDGQMDGGAGGLRGSTWWLV*SSVLDL
Trigger: GAGGTCCAACACACTTGACAAAACCAACCACCACGT...GGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: DRACVHLSRALSGMGGGGTRTWW*VLSSVL
Trigger: CAACACACTTGACAAAACCAACCACCACGTCCTCGT...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCCCTGCTCCTGCAGACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: TQGLLPWLGESAAALLLQTRTWW*VLSSVL
Trigger: CAACACACTTGACAAAACCAACCACCACGTCCTCGT...CTGCAGGAGCAGGGCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACAGGGCCTGCGTCCATCTGTCCAGAGCGCTAAGCGGGATGGGAGGCGGAGGGGGAAAAGGGTTTACTTaGAGTCTTTTCCCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: DRACVHLSRALSGMGGGGGKGFT*SLFPVR
Trigger: CCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCC...CCCTCCGCCTCCCATCCCGCTTAGCGCTCTGGACAGATGGACGCAGGCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCCCTCCAGGTGGCTCTaGTCGAGCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAPSRWL*SSSSRC
Trigger: GCACCTGGAAGAGCTCGACAAGAGCCACCTGGAGGG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGCTCTGGAGACCTCTaGCCCCCTTCGCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGSGDL*PPSLWG
Trigger: CCCCCACAGCGAAGGGGGCAAGAGGTCTCCAGAGCC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGCGGCTGGCTGGTGTaGCCTGGAGACTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGGWLV*PGDLEP
Trigger: GGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTTGCTCTCGGTCAGCTaGCTGAAGAAGGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTLLSVS*LKKAGG
Trigger: GCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AAATCACAGCAGCGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGTTGCTCTCGGTCAGCTaGCTGAAGAAGGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: KSQQRDWAFYPRPRVRDLLLSVS*LKKAGG
Trigger: GCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAA...CAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp AGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RMPALDGQMDGGAGGLRGLISCF*DLTMAE
Trigger: CTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAA...GCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSALISCF*DLTMAE
Trigger: CTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHVMAGI*KISVPG
Trigger: GCCTGGGACGGAGATCTTCAATATGCCCGCCATCAC...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCT +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGLPET*AFPPPP
Trigger: AGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTTCCAGCAATCTCGTaGGCTGGGGCAGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHFPAIS*AGAVCG
Trigger: CCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGCCTGCACACGCCTCTaGAACGGTAAGCAGAGATCA +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWACTRL*NGKQRS
Trigger: TGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGCAGTCCCCGCCCCCTaGGTCCTGCGAGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIAVPAP*VLRVMG
Trigger: CCCCATCACTCGCAGGACCAAGGGGGCGGGGACTGC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGTGTCTGAGCTGTTGTaGACAGTGGCTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWVSELL*TVASAS
Trigger: GGAGGCTGAAGCCACTGTCAACAACAGCTCAGACAC...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTCGGTGTCTGAGCTGTaGTTGACAGTGGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWSVSEL*LTVASA
Trigger: GGCTGAAGCCACTGTCAACAACAGCTCAGACACCGA...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATGCAGCTCGCGCTGCTaGCGGATCTCAGGGAACTGC +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGCSSRC*RISGNC
Trigger: GCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGGCCGCATAAGCCCGTTCATGTaGATGAACTTGATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GEAVAWRCVVILLWVPGRISPFM*MNLMRC
Trigger: GCAGCGCATCAAGTTCATCAACATGAACGGGCTTAT...GCGGCCAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGATGACCTGGCGGTCTTaGTACACCTTCATGGGGTCG +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWMTWRS*YTFMGS
Trigger: CGACCCCATGAAGGTGTACAAAGACCGCCAGGTCAT...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp CCTCAGTGTGAGGAGAGGGGATGCTCTCGGTGTCTGAGCTGTTGTTaGCAGTGGCTGGGCCACTGCATTCCCCTCTGGGCACCTCATTCC +
Preference number: 5 (lower is better)
Translates to: PQCEERGCSRCLSCC*QWLGHCIPLWAPHS
Trigger: GGAATGAGGTGCCCAGAGGGGAATGCAGTGGCCCAGCCACTGTCAACAACAGCTCAGACACCGAGAGCATCCCCTCTCCTCACACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000405201.5
ENST00000458234.5
CDS TCA 90 bp CCCAGAGAACGGAGTTCCAGTTCCTGGATGGAAAAGGGTTTACTTTaGGTCTTTTCCCGGTGCGGGTCCGAGGCCGAGGCAGGTGGCGCC +
Preference number: 5 (lower is better)
Translates to: PRERSSSSWMEKGLL*VFSRCGSEAEAGGA
Trigger: GGCGCCACCTGCCTCGGCCTCGGACCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAACTCCGTTCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp ATGGGGTCGGCCATAAGCCCGTTCATGTTGATGAACTTGATGCGCTaGTGGTCAGCGTCGTACAGCATGGGCGGGATCACGGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: MGSAISPFMLMNLMR*WSASYSMGGITASW
Trigger: CCAGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 90 bp ACCCTCCCTCTCAGACACATTAACACCCCTCTCTCTGCTCGCCCCTaGAGGCCTGGGACGGGTACCTCAATACCCACCTTGATTCCACCC +
Preference number: 5 (lower is better)
Translates to: TLPLRHINTPLSARP*RPGTGTSIPTLIPP
Trigger: GGGTGGAATCAAGGTGGGTATTGAGGTACCCGTCCCAGGCCTGCAGGGGCGAGCAGAGAGAGGGGTGTTAATGTGTCTGAGAGGGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494460.1
CDS CCA 90 bp AGTTCTTACACTGCGACACAGTCTTGGAGCCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGTGTTCCAGGAGACCTTTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSYTATQSWSPPSGR*PTSCGRVPGDLSWL
Trigger: CAGCCAAGAAAGGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGTGTAAGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp TCAATGAACTCCATCTCTGACTTCCCCAGCTCGGGCAGGTATGAGTaGGACTCTGGCCGCAGGTGGAGCTCCTGGGACCGTTCATTCCCG +
Preference number: 5 (lower is better)
Translates to: SMNSISDFPSSGRYE*DSGRRWSSWDRSFP
Trigger: CGGGAATGAACGGTCCCAGGAGCTCCACCTGCGGCCAGAGTCCCACTCATACCTGCCCGAGCTGGGGAAGTCAGAGATGGAGTTCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 90 bp GAGTGTGGGAGGCGCCCGGCCCTTGTGTGGGAGGGATCCAACCCCTaGTCCCAGTATTCATGCAGGTATTCACTGGGCACCTACTATGTG +
Preference number: 5 (lower is better)
Translates to: ECGRRPALVWEGSNP*SQYSCRYSLGTYYV
Trigger: CACATAGTAGGTGCCCAGTGAATACCTGCATGAATACTGGGACCAGGGGTTGGATCCCTCCCACACAAGGGCCGGGCGCCTCCCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 90 bp CAAAGCCACACAGGTGCTGAGTGTGGGAGGCGCCCGGCCCTTGTGTaGGAGGGATCCAACCCCTGGTCCCAGTATTCATGCAGGTATTCA +
Preference number: 5 (lower is better)
Translates to: QSHTGAECGRRPALV*EGSNPWSQYSCRYS
Trigger: TGAATACCTGCATGAATACTGGGACCAGGGGTTGGATCCCTCCCACACAAGGGCCGGGCGCCTCCCACACTCAGCACCTGTGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTCGTCTGTCTTCTCCTaGAGGAGGTCTTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWSSVFS*RRSSLS
Trigger: CGACAAGGAAGACCTCCTCAAGGAGAAGACAGACGA...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGCGATGGCCGACCAGTaGCGGCCGTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: PAQMAATEYASNSFCPRKAMADQ*RPCSRR
Trigger: TCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACCACTGCGACACAGTCTaGGAGCCCACCATCCGGGCG +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDHCDTV*EPTIRA
Trigger: CGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGTG...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCCTCCTTCTCCTCCTaGGGGACCACAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSSFSS*GTTGGG
Trigger: ACCTCCTCCTGTGGTCCCCAAGGAGGAGAAGGAGGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTCCGTGCACTCGCTCTaGACGGGCTCCTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGASVHSL*TGSSAF
Trigger: GAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGGA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTCCGTGCACTCGCTCTaGACGGGCTCCTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQSVHSL*TGSSAF
Trigger: GAAGGCCGAGGAGCCCGTCAAGAGCGAGTGCACGGA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACCTGGTGATGGTGCCCTaGTACAGGACGTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNLVMVP*YRTSAG
Trigger: GCCAGCTGACGTCCTGTACAAGGGCACCATCACCAG...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGTGCTGTGCGGGGACTaGGCGATCTCACGAGGCGTC +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQVLCGD*AISRGV
Trigger: GACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCAC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGATGGCGGTGGCCGCGTaGTGGTGCATCTGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREMAVAA*WCICCE
Trigger: CTCGCAGCAGATGCACCACAACGCGGCCACCGCCAT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGGTTTTGTCAAGTGTGTaGGACCTCCTGGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWVLSSV*DLLGRV
Trigger: CACTCTCCCCAGGAGGTCCAACACACTTGACAAAAC...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCCTCTTGTTTTGTCAAGTGTGTaGGACCTCCTGGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: PLVLRVMGSPTVGLHTPLVLSSV*DLLGRV
Trigger: CACTCTCCCCAGGAGGTCCAACACACTTGACAAAAC...AAGAGGCGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACAGACCGACGTCTTGTTaGGCTCTGGAGACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHRPTSC*ALETSC
Trigger: GCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTCT...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGAGACCGACGTCTTGTTaGGCTCTGGAGACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALRPTSC*ALETSC
Trigger: GCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTCT...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWSCFLD*TMAELL
Trigger: GAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: RWMEAQADSGAPSLVGGVSCFLD*TMAELL
Trigger: GAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGA...GACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: AFGGGSGVEVRGHPALGPLISCF*DLTMAE
Trigger: CTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAA...GGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCT +
Preference number: 5 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIGLPET*AFPPPP
Trigger: AGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTCAGGGGCTCCTTCCTaGGTTGGGGGAGTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESGAPS*VGGVGS
Trigger: GCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTTTCCAGCAATCTCGTaGGCTGGGGCAGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTFPAIS*AGAVCG
Trigger: CCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCGCCCTGCTCCTGCAGGGCCGTTCCTGTGGCTCGCTGGGACCTGACACCGCCCTGGGTAAGTCCTTCCTaGCGTAAAACATCTGAATTA +
Preference number: 5 (lower is better)
Translates to: PPCSCRAVPVARWDLTPPWVSPS*RKTSEL
Trigger: TAATTCAGATGTTTTACGCAAGGAAGGACTTACCCA...GGGCGGTGTCAGGTCCCAGCGAGCCACAGGAACGGCCCTGCAGGAGCAGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGTCTAGCCGAGGGCGCTaGCTTTCAATGAACTCCATC +
Preference number: 5 (lower is better)
Translates to: DGQMDGGAGGLRGSFLGWSSRGR*LSMNSI
Trigger: GATGGAGTTCATTGAAAGCAAGCGCCCTCGGCTAGA...CCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGTGTCGGAGGGCTGGTaGTACAGCGGCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAVSEGW*YSGSST
Trigger: GGTGGAGCTGCCGCTGTACAACCAGCCCTCCGACAC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTTCATGTTGATGAACTaGATGCGCTGCTGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRFMLMN*MRCWSA
Trigger: CGCTGACCAGCAGCGCATCAAGTTCATCAACATGAA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp GCGGCCTTTGGAGGCCACAGCCTCCTTCTCGTCGTTGTCCTCCCCTaGGGTGTCGTCTGTCTTCTCCTTGAGGAGGTCTTCCTTGTCGTT +
Preference number: 5 (lower is better)
Translates to: AAFGGHSLLLVVVLP*GVVCLLLEEVFLVV
Trigger: AACGACAAGGAAGACCTCCTCAAGGAGAAGACAGACGACACCTCAGGGGAGGACAACGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 90 bp AGTCTGTGTCCACACCCACGGGTGCCGACATGGGGCGTGAACAAGTaGACACACATGCACGTGAGCAAGGACGCATCAGCAGTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: SLCPHPRVPTWGVNK*THMHVSKDASAVCG
Trigger: TCCACACACTGCTGATGCGTCCTTGCTCACGTGCATGTGTGTGCACTTGTTCACGCCCCATGTCGGCACCCGTGGGTGTGGACACAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 90 bp AGTTCTTACACTGCGACACAGTCTTGGAGCCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGTGTTCCAGGAGACATCCTCTCATTC +
Preference number: 5 (lower is better)
Translates to: SSYTATQSWSPPSGR*PTSCGRVPGDILSF
Trigger: GAATGAGAGGATGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGTGTAAGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS CCA 90 bp GATCTGCTAACTGCCAGGCGCTGTGCTAGGGACTGGGAAGCAGAGTaGGGCGTTCATACCCAGCAACCACGTCAATGGGTGCAAAGCCAC +
Preference number: 5 (lower is better)
Translates to: DLLTARRCARDWEAE*GVHTQQPRQWVQSH
Trigger: GTGGCTTTGCACCCATTGACGTGGTTGCTGGGTATGAACGCCCCACTCTGCTTCCCAGTCCCTAGCACAGCGCCTGGCAGTTAGCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGCCTCCTTCTCGTCGTaGTCCTCCCCTGAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDASFSS*SSPEVS
Trigger: CGACACCTCAGGGGAGGACAACGACGAGAAGGAGGC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATGCAGTTTTGCGGCCTTaGGAGGCCACAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHAVLRP*EATASF
Trigger: GAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGC...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACGTCTTCCCTGGCTGTaGGCAGTTTTGCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGRLPWL*AVLRPL
Trigger: CAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACG...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCAAGGATGCCGGCTCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGTTCTCCATCTTCAGCTaGTGCTGCTGCAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: ARMPALDGQMDGGAGGLRFSIFS*CCCKIS
Trigger: TGAGATCTTGCAGCAGCACAAGCTGAAGATGGAGAA...CCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGAGCCGGCATCCTTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCTTCTGCCGTCCTCCTaGGAGCACTGGGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHLLPSS*EHWVTD
Trigger: GTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAAG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAMWCCS*RWWGLC
Trigger: ACACAGCCCCCACCACCTCAAAGAGCAGCACCACAT...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGACCGAGGGATCCCTaGTGTGATGGACCCGCGGAT +
Preference number: 5 (lower is better)
Translates to: PAQMAATEYASNSFCPRKGPRDP*CDGPAD
Trigger: ATCCGCGGGTCCATCACACAAGGGATCCCTCGGTCC...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGTGCTGTGCGGGGACTaGGCGATCTCACGAGGCGTC +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGVLCGD*AISRGV
Trigger: GACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCAC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAATGGCGGTGGCCGCGTaGTGGTGCATCTGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGMAVAA*WCICCE
Trigger: CTCGCAGCAGATGCACCACAACGCGGCCACCGCCAT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGACGTGGTGGTTGGTTTaGTCAAGTGTGTTGGACCTC +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLTWWLV*SSVLDL
Trigger: GAGGTCCAACACACTTGACAAAACCAACCACCACGT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTGCTTGGGGAGCCCCTaGTCGTGGGTCAGACTGGGT +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQCLGSP*SWVRLG
Trigger: ACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGAGCTCTTCCAGGTGCTaGGGGAGCCCCTTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESSSRC*GSPLSW
Trigger: CCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCT...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACAGCTCTTCCAGGTGCTaGGGGAGCCCCTTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDSSSRC*GSPLSW
Trigger: CCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGATTGACCATGGCGGAGTaGCTCTCGGTCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGLTMAE*LSVSLL
Trigger: CAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAA...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCTGGACGGACAGATGGATGGAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SGRTDGWRRRRTQGLLPWLISCF*DLTMAE
Trigger: CTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAA...CCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTCCATCCATCTGTCCGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCCGCCCCCTTGGTCCTGCGAGTGATGGGGTCACCGACTGTCGGCCTGCACACGCTTCTTGTTGATCTCTaGCTTCTTGGACTTGACCAT +
Preference number: 5 (lower is better)
Translates to: PAPLVLRVMGSPTVGLHTLLVDL*LLGLDH
Trigger: ATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAG...CGTGTGCAGGCCGACAGTCGGTGACCCCATCACTCGCAGGACCAAGGGGGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GGAACGAGCGCACTGGGGGCTGGACAGGGCCTGCGTCCATCTGTCCAGAGCGCTTGGGTGTTCAGCTTCTaGTTGATCTCTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GTSALGAGQGLRPSVQSAWVFSF*LISCFL
Trigger: CAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCA...AGCGCTCTGGACAGATGGACGCAGGCCCTGTCCAGCCCCCAGTGCGCTCGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGTCAGGCTCATTCCGGTaGTGGGTGTTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARSGSFR*WVFSFL
Trigger: CAAGAAGCTGAACACCCACAACCGGAATGAGCCTGA...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGCCAGGCTGGCTGATATaGTATTCAGGCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARPGWLI*YSGSFR
Trigger: CCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCGGAGAGTGTCTCGTACTGCGAGCAGAGCAGTGGCTTGGGCTCCTCGTCCCAGCCAGGCTGGCTGATATaGTATTCAGGCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: SESVSYCEQSSGLGSSSQPGWLI*YSGSFR
Trigger: CCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG...CTGGGACGAGGAGCCCAAGCCACTGCTCTGCTCGCAGTACGAGACACTCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418829.5
CDS-3UTR CAA 90 bp GAGGCGCAGGCGGACTCAGGGGCTCCTTCCTTGGTTGGGGGAGTCGGCAGCCGCTGGGTAAGTCCTTCCTaGCGTAAAACATCTGAATTA +
Preference number: 5 (lower is better)
Translates to: EAQADSGAPSLVGGVGSRWVSPS*RKTSEL
Trigger: TAATTCAGATGTTTTACGCAAGGAAGGACTTACCCA...GCGGCTGCCGACTCCCCCAACCAAGGAAGGAGCCCCTGAGTCCGCCTGCGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGTCAGGCTACGGTCCTaGGTGAGGTCTTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNVRLRS*VRSSDP
Trigger: GGGATCTGAAGACCTCACCAAGGACCGTAGCCTGAC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAGTCAGGCTACGGTCCTaGGTGAGGTCTTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGVRLRS*VRSSDP
Trigger: GGGATCTGAAGACCTCACCAAGGACCGTAGCCTGAC...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AAATCACAGCAGCGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGGAGGCTTCCATGAGGTaGCGGGTGATGCAGATGCTT +
Preference number: 5 (lower is better)
Translates to: KSQQRDWAFYPRPRVRDLEASMR*RVMQML
Trigger: AAGCATCTGCATCACCCGCAACCTCATGGAAGCCTC...CAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS TCA 90 bp GGGGGTTGTTCTCGATGCGCTCCACCTTCTTCTCCCAGGCCTCCATaGGCTGGTCATAGCGCTGGCAGAACTTCTGCTCCCATTGTTTCC +
Preference number: 5 (lower is better)
Translates to: GGCSRCAPPSSPRPP*AGHSAGRTSAPIVS
Trigger: GGAAACAATGGGAGCAGAAGTTCTGCCAGCGCTATGACCAGCTCATGGAGGCCTGGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS GCA 90 bp CCAAGAAAGGAAGGGCTACCACTCACTTGGGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGGTGCTTGGCAGAGGAGATGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PRKEGLPLTWEMAPI*LSRTLGCLAEEMRG
Trigger: TCCCCTCATCTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTCCTTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS CCA 90 bp AGACTAAGCCCCCAAGAAAGGAAGGGCTACCACTCACTTGGGAGATaGCACCTATTTGCCTCTCGAGGACGCTGGGGTGCTTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RLSPQERKGYHSLGR*HLFASRGRWGAWQR
Trigger: CCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTCCTTTCTTGGGGGCTTAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGCAGTTTTGCGGCCTTaGGAGGCCACAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDAVLRP*EATASF
Trigger: GAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACGGGTGATGCGGCCTTaGCGTCTTCCCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGRVMRP*RLPWLL
Trigger: CAACAGCCAGGGAAGACGCAAAGGCCGCATCACCCG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGAATGGCCTCCTCGCTGTaGGCCTCATTAGCCATTGAG +
Preference number: 5 (lower is better)
Translates to: TWPDLVSSNLVGWGSLWGMASSL*ASLAIE
Trigger: CTCAATGGCTAATGAGGCCAACAGCGAGGAGGCCAT...TCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTCGGTGTCTGAGCTGTaGTTGACAGTGGCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSVSEL*LTVAGP
Trigger: TGGCCCAGCCACTGTCAACAACAGCTCAGACACCGA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CAA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCAGGACGCTGGGGTGCTaGGCAGAGGAGATGAGGGGA +
Preference number: 5 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIRTLGC*AEEMRG
Trigger: TCCCCTCATCTCCTCTGCCAAGCACCCCAGCGTCCT...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGG +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAGDGTY*PLEDAG
Trigger: CCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCC...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCTTCTGCCGTCCTCCTaGGAGCACTGGGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALLPSS*EHWVTD
Trigger: GTCTGTGACCCAGTGCTCCAAGGAGGACGGCAGAAG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGGGAAAAGGGTTTACTTaGAGTCTTTTCCCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALGKGFT*SLFPVR
Trigger: CCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCC...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCGTGTTGCCTGGAGACTaGGAGCCCATCCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIVLPGD*EPILLG
Trigger: GCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACAC...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp CTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTTTGGGCGGCTGGCTGGTGTaGCCTGGAGACTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LCKPNRGFHEVAGDADALGGWLV*PGDLEP
Trigger: GGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCC...CAAAGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTVMAGI*KISVPG
Trigger: GCCTGGGACGGAGATCTTCAATATGCCCGCCATCAC...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGCCTCCAGCCCCATGTaGGTGCTGGCATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGASSPM*VLACSC
Trigger: GCAGGAACATGCCAGCACCAACATGGGGCTGGAGGC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGCCTGCACACGCCTCTaGAACGGTAAGCAGAGATCA +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNACTRL*NGKQRS
Trigger: TGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTCTAGCCGAGGGCGCTaGCTTTCAATGAACTCCATC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTSSRGR*LSMNSI
Trigger: GATGGAGTTCATTGAAAGCAAGCGCCCTCGGCTAGA...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTGTTCATGTTGATGAACTaGATGCGCTGCTGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: FQQSRWLGQSVGTGTSALFMLMN*MRCWSA
Trigger: CGCTGACCAGCAGCGCATCAAGTTCATCAACATGAA...CAGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTTCATGTTGATGAACTaGATGCGCTGCTGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: VSSNLVGWGSLWGPERAHFMLMN*MRCWSA
Trigger: CGCTGACCAGCAGCGCATCAAGTTCATCAACATGAA...GTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCTGCTTTGGGTCCCTGATCAGGCCAAAGTTCTaGGGATGCTGCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: IRGRQWRGGAWSSCFGSLIRPKF*GCCMNF
Trigger: GAAGTTCATGCAGCATCCCAAGAACTTTGGCCTGAT...CAGGGACCCAAAGCAGGATGACCACGCACCTCCACGCCACTGCCTCCCCCGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp CTGATCATGTACATGTGTGCTGCAGGCCTTTCTGCATACTTGTCCTaGGTTCCCACCACACTCTGGCTGTGTCTCTCCCTCCCGCGCCCT +
Preference number: 5 (lower is better)
Translates to: LIMYMCAAGLSAYLS*VPTTLWLCLSLPRP
Trigger: AGGGCGCGGGAGGGAGAGACACAGCCAGAGTGTGGTGGGAACTCAGGACAAGTATGCAGAAAGGCCTGCAGCACACATGTACATGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS TCA 90 bp CAAGTTCACAGTAGCTGGCTGTGCCATGGACCAGCCGCGAGAACCTaGAAGAGTTCTCGGAGCTCTCCAAGCCTCTCCCAATCGCATGTG +
Preference number: 5 (lower is better)
Translates to: QVHSSWLCHGPAART*KSSRSSPSLSQSHV
Trigger: CACATGCGATTGGGAGAGGCTTGGAGAGCTCCGAGAACTCTTTCAGGTTCTCGCGGCTGGTCCATGGCACAGCCAGCTACTGTGAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 90 bp TCCCGGAAGGTCTCCTTCTCCTGCTCACTCCACATGTTCATGACCTaGCGGTCTTTGTACACCTTCATGGGGTCGGCCATAAGCCCGTTC +
Preference number: 5 (lower is better)
Translates to: SRKVSFSCSLHMFMT*RSLYTFMGSAISPF
Trigger: GAACGGGCTTATGGCCGACCCCATGAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGCAGTTTTGCGGCCTTaGGAGGCCACAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGAVLRP*EATASF
Trigger: GAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCGTCTTCCCTGGCTGTaGGCAGTTTTGCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQRLPWL*AVLRPL
Trigger: CAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGTGTCTGAGCTGTTGTaGACAGTGGCTGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREVSELL*TVAGPL
Trigger: CAGTGGCCCAGCCACTGTCAACAACAGCTCAGACAC...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356219.7
ENST00000405201.5
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGACTGGTGATGGTGCCCTaGTACAGGACGTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGLVMVP*YRTSAG
Trigger: GCCAGCTGACGTCCTGTACAAGGGCACCATCACCAG...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGTTTTGTCAAGTGTGTaGGACCTCCTGGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNVLSSV*DLLGRV
Trigger: CACTCTCCCCAGGAGGTCCAACACACTTGACAAAAC...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATAGACCGACGTCTTGTTaGGCTCTGGAGACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHRPTSC*ALETSC
Trigger: GCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTCT...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGCCCAAGACCGACGTCTaGTTTGGCTCTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQPKTDV*FGSGDL
Trigger: GAGGTCTCCAGAGCCAAACAAGACGTCGGTCTTGGG...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTTGACCATGGCGGAGTaGCTCTCGGTCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQLTMAE*LSVSLL
Trigger: CAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLASCFLD*TMAELL
Trigger: GAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp AAATCACAGCAGCGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: KSQQRDWAFYPRPRVRDLLISCF*DLTMAE
Trigger: CTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAA...CAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCGCTGCTGTGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp CGCGACTGGGCCTTCTACCCAAGGCCACGAGTCCGTGACCTGATGGAGCTGGCTTGGGTGTTCAGCTTCTaGTTGATCTCTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RDWAFYPRPRVRDLMELAWVFSF*LISCFL
Trigger: CAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCA...AGCCAGCTCCATCAGGTCACGGACTCGTGGCCTTGGGTAGAAGGCCCAGTCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp CTGACTTGGTTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACTCAGGCTCATTCCGGTaGTGGGTGTTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LTWFPAISLAGAVCGDRNSGSFR*WVFSFL
Trigger: CAAGAAGCTGAACACCCACAACCGGAATGAGCCTGA...GTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAACCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDVMAGI*KISVPG
Trigger: GCCTGGGACGGAGATCTTCAATATGCCCGCCATCAC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTTTCCAGCAATCTCGTaGGCTGGGGCAGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGREFPAIS*AGAVCG
Trigger: CCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTTTCCAGCAATCTCGTaGGCTGGGGCAGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAFPAIS*AGAVCG
Trigger: CCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACACCCACCTGGCCTGACTaGGTTTCCAGCAATCTCGTT +
Preference number: 5 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTPTWPD*VSSNLV
Trigger: AACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGG...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAGGGCCAGCCCGGATAAGCCCGTTCATGTaGATGAACTTGATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SRAPGKHPLSKVCTGPARISPFM*MNLMRC
Trigger: GCAGCGCATCAAGTTCATCAACATGAACGGGCTTAT...CCGGGCTGGCCCTGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp GCTGAGCGGCGGGGACTCTTCCCACTGGTCATATTTACCCATGAGTaGCTTTCTAATTATGGCCTCCAGCCCCATGTTGGTGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: AERRGLFPLVIFTHE*LSNYGLQPHVGAGM
Trigger: CATGCCAGCACCAACATGGGGCTGGAGGCCATAATTAGAAAGGCACTCATGGGTAAATATGACCAGTGGGAAGAGTCCCCGCCGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000429285.6
ENST00000464377.1
CDS CCA 90 bp AGCTGCTGCCGTGGTAACCCAGAGAACGGAGTTCCAGTTCCTGGATaGAAAAGGGTTTACTTTGAGTCTTTTCCCGGTGCGGGTCCGAGG +
Preference number: 5 (lower is better)
Translates to: SCCRGNPENGVPVPG*KRVYFESFPGAGPR
Trigger: CCTCGGACCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAACTCCGTTCTCTGGGTTACCACGGCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATGGCTGTTGGCAGTTTaGCGGCCTTTGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGWLLAV*RPLEAT
Trigger: TGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGATGGCCTCCTCGCTGTaGGCCTCATTAGCCATTGAG +
Preference number: 5 (lower is better)
Translates to: PAQMAATEYASNSFCPRKMASSL*ASLAIE
Trigger: CTCAATGGCTAATGAGGCCAACAGCGAGGAGGCCAT...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHSCFLD*TMAELL
Trigger: GAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGA...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp ACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGTCATCCAGGCTGGCTGATATaGTATTCAGGCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: TLVPNAFGGGSGVEVRGHPGWLI*YSGSFR
Trigger: CCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG...ATGACCACGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGGTGTCTGAGCTGTTGTaGACAGTGGCTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQVSELL*TVASAS
Trigger: GGAGGCTGAAGCCACTGTCAACAACAGCTCAGACAC...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TTTCCAGCAATCTCGTTGGCTGGGGCAGTCTGTGGGGACCGGAACGAGCGCACTATCAGGCCAAAGTTCTaGGGATGCTGCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: FPAISLAGAVCGDRNERTIRPKF*GCCMNF
Trigger: GAAGTTCATGCAGCATCCCAAGAACTTTGGCCTGAT...AGTGCGCTCGTTCCGGTCCCCACAGACTGCCCCAGCCAACGAGATTGCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp GTCCAAACTTCCCTGGCAGATGAGGCTTCTTGGGGTCGGGGACTGTaGCAGATTCTTTATTTGCCCACCCACTCACGTATTCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VQTSLADEASWGRGL*QILYLPTHSRIPWW
Trigger: CCACCAGGGAATACGTGAGTGGGTGGGCAAATAAAGAATCTGTCACAGTCCCCGACCCCAAGAAGCCTCATCTGCCAGGGAAGTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 90 bp CCTGAAAGAGTTCTCGGAGCTCTCCAAGCCTCTCCCAATCGCATGTaGCTCACCAGGATGTTCTGTAAAACGATACGCAGGTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: PERVLGALQASPNRM*LTRMFCKTIRRWHL
Trigger: CAGGTGCCACCTGCGTATCGTTTTACAGAACATCCTGGTGAGGCACATGCGATTGGGAGAGGCTTGGAGAGCTCCGAGAACTCTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 90 bp GATAAGAAGACTAAGCCCCCAAGAAAGGAAGGGCTACCACTCACTTaGGAGATGGCACCTATTTGCCTCTCGAGGACGCTGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: DKKTKPPRKEGLPLT*EMAPICLSRTLGCL
Trigger: CAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTCCTTTCTTGGGGGCTTAGTCTTCTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGTCGTCTGTCTTCTCCTaGAGGAGGTCTTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRESSVFS*RRSSLS
Trigger: CGACAAGGAAGACCTCCTCAAGGAGAAGACAGACGA...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTTTCTCCATCTTCAGCTaGTGCTGCTGCAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLAFSIFS*CCCKIS
Trigger: TGAGATCTTGCAGCAGCACAAGCTGAAGATGGAGAA...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGCTGGACCGACATTCCTaGGGAGATGGCACCTATTTG +
Preference number: 5 (lower is better)
Translates to: RRWRPQNTHRIHSAQGRELDRHS*GDGTYL
Trigger: CAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAG...CTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACAACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTTRTWW*VLSSVL
Trigger: CAACACACTTGACAAAACCAACCACCACGTCCTCGT...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp CAGATGAGGCTTCTTGGGGTCGGGGACTGTGACAGATTCTTTATTTaGCCACCCACTCACGTATTCCCTGGTGGATCTGCTAACTGCCAG +
Preference number: 5 (lower is better)
Translates to: QMRLLGVGDCDRFFI*PPTHVFPGGSANCQ
Trigger: CTGGCAGTTAGCAGATCCACCAGGGAATACGTGAGTGGGTGGGCAAATAAAGAATCTGTCACAGTCCCCGACCCCAAGAAGCCTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATCGTCTGTCTTCTCCTaGAGGAGGTCTTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGSSVFS*RRSSLS
Trigger: CGACAAGGAAGACCTCCTCAAGGAGAAGACAGACGA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTTCCCCTCCCTTCCCGAGCACCAGGTAAACATCCCCTGAGTAAGGTCTGCACATTCTCCATCTTCAGCTaGTGCTGCTGCAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: LPLPSRAPGKHPLSKVCTFSIFS*CCCKIS
Trigger: TGAGATCTTGCAGCAGCACAAGCTGAAGATGGAGAA...TGTGCAGACCTTACTCAGGGGATGTTTACCTGGTGCTCGGGAAGGGAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCCTGGACCGACATTCCTaGGGAGATGGCACCTATTTG +
Preference number: 5 (lower is better)
Translates to: VNDRIPPPCADGGHRIRILDRHS*GDGTYL
Trigger: CAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAG...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDTRTWW*VLSSVL
Trigger: CAACACACTTGACAAAACCAACCACCACGTCCTCGT...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACGGAAAAGGGTTTACTTaGAGTCTTTTCCCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDGKGFT*SLFPVR
Trigger: CCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCC...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp CTTTCCGACCACTCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: LSDHSLLCKPNRGFHEVASCFLD*TMAELL
Trigger: GAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGA...CGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALISCF*DLTMAE
Trigger: CTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp CTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTTTGGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LCKPNRGFHEVAGDADALVMAGI*KISVPG
Trigger: GCCTGGGACGGAGATCTTCAATATGCCCGCCATCAC...CAAAGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS GCA 90 bp TCAGGCTCATTCCGGTTGTGGGTGTTCAGCTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATGGCGGAGTTGCTCTCGGTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SGSFRLWVFSFLLIS*FLDLTMAELLSVSL
Trigger: CAAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAATGAGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS GCA 90 bp TTCTTGGGATGCTGCATGAACTTCTCCCGGAAGGTCTCCTTCTCCTaGTCACTCCACATGTTCATGACCTGGCGGTCTTTGTACACCTTC +
Preference number: 5 (lower is better)
Translates to: FLGCCMNFSRKVSFS*SLHMFMTWRSLYTF
Trigger: GAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTTCCGGGAGAAGTTCATGCAGCATCCCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 90 bp ACACCCTTGCTCCGTAGCTCACGTACTGATCATGTACATGTGTGCTaGAGGCCTTTCTGCATACTTGTCCTGAGTTCCCACCACACTCTG +
Preference number: 5 (lower is better)
Translates to: TPLLRSSRTDHVHVC*RPFCILVLSSHHTL
Trigger: CAGAGTGTGGTGGGAACTCAGGACAAGTATGCAGAAAGGCCTGCAGCACACATGTACATGATCAGTACGTGAGCTACGGAGCAAGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS GCA 90 bp GAGACACCCTTGCTCCGTAGCTCACGTACTGATCATGTACATGTGTaGTGCAGGCCTTTCTGCATACTTGTCCTGAGTTCCCACCACACT +
Preference number: 5 (lower is better)
Translates to: ETPLLRSSRTDHVHV*CRPFCILVLSSHHT
Trigger: AGTGTGGTGGGAACTCAGGACAAGTATGCAGAAAGGCCTGCAGCACACATGTACATGATCAGTACGTGAGCTACGGAGCAAGGGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 90 bp AGAGGGTTAAAAGCATTGGCGCTGAGCGGCGGGGACTCTTCCCACTaGTCATATTTACCCATGAGTGCCTTTCTAATTATGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RGLKALALSGGDSSH*SYLPMSAFLIMASS
Trigger: GCTGGAGGCCATAATTAGAAAGGCACTCATGGGTAAATATGACCAGTGGGAAGAGTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000413172.1
ENST00000429285.6
ENST00000464377.1
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTTCTCCATCTTCAGCTaGTGCTGCTGCAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDFSIFS*CCCKIS
Trigger: TGAGATCTTGCAGCAGCACAAGCTGAAGATGGAGAA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGTRTWW*VLSSVL
Trigger: CAACACACTTGACAAAACCAACCACCACGTCCTCGT...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GGCCCTTTTGTCCGCCCACCTGGCCTGACTTGGTTTCCAGCAATCTCGTTGGCTCTTCTTGTTGATCTCTaGCTTCTTGGACTTGACCAT +
Preference number: 5 (lower is better)
Translates to: GPFVRPPGLTWFPAISLALLVDL*LLGLDH
Trigger: ATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAG...AGCCAACGAGATTGCTGGAAACCAAGTCAGGCCAGGTGGGCGGACAAAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGAACTTCTGCTCCCATaGTTTCCGAGCGTGATTCCT +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGELLLP*FPSVIP
Trigger: AGGAATCACGCTCGGAAACAATGGGAGCAGAAGTTC...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 90 bp CCTGGTCCCAGTATTCATGCAGGTATTCACTGGGCACCTACTATGTaGTGGGTGCTATTCTTCTGTGCCAGTAAGCTCCTATGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: PGPSIHAGIHWAPTM*WVLFFCASKLLWKA
Trigger: GGCTTTCCATAGGAGCTTACTGGCACAGAAGAATAGCACCCAGCACATAGTAGGTGCCCAGTGAATACCTGCATGAATACTGGGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 90 bp CCTACTATGTGCTGGGTGCTATTCTTCTGTGCCAGTAAGCTCCTATaGAAAGCCCAGCAAATCAAGAAACTGCCCTGGGGCTCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: PTMCWVLFFCASKLL*KAQQIKKLPWGSPN
Trigger: ATTTGGGGAGCCCCAGGGCAGTTTCTTGATTTGCTGGGCTTTCCATAGGAGCTTACTGGCACAGAAGAATAGCACCCAGCACATAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS-3UTR CAA 90 bp CGACTGTCGGCCTGCACACGCCTCTTGAACGGTAAGCAGAGATCAAAAGCACAGTGGGTGTTCAGCTTCTaGTTGATCTCTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RLSACTRLLNGKQRSKAQWVFSF*LISCFL
Trigger: CAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCA...CTGTGCTTTTGATCTCTGCTTACCGTTCAAGAGGCGTGTGCAGGCCGACAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCATAAGCCCGTTCATGTaGATGAACTTGATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIISPFM*MNLMRC
Trigger: GCAGCGCATCAAGTTCATCAACATGAACGGGCTTAT...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp CTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATGCTACCTTTTCTGCTGTCTaGGCCACATTTCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLCKPNRGFHEVAGDADATFSAV*ATFLQH
Trigger: GTGCTGCAGAAATGTGGCCAAGACAGCAGAAAAGGT...AGCATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp CCTGCGCAGATGGCGGCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGCTTCTTGTTGATCTCTaGCTTCTTGGACTTGACCAT +
Preference number: 5 (lower is better)
Translates to: PAQMAATEYASNSFCPRKLLVDL*LLGLDH
Trigger: ATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAG...CTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGCCGCCATCTGCGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGCTTCTTGTTGATCTCTaGCTTCTTGGACTTGACCAT +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGALLVDL*LLGLDH
Trigger: ATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAG...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp GTAAATGACAGAATACCACCACCCTGCGCAGATGGCGGCCACAGAATACGCATCTGGGTGTTCAGCTTCTaGTTGATCTCTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VNDRIPPPCADGGHRIRIWVFSF*LISCFL
Trigger: CAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCA...GATGCGTATTCTGTGGCCGCCATCTGCGCAGGGTGGTGGTATTCTGTCATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp GAGCTCAGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGATGGGTGTTCAGCTTCTaGTTGATCTCTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ELSLDFGSKCIRGRQWRGWVFSF*LISCFL
Trigger: CAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCA...TCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACTGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 90 bp TGTGCTGCTGCAAGATCTCATCGAGGTTCTGCCTCTTCTTGTAGTTaGAGTAGAAGTTCTTACACTGCGACACAGTCTTGGAGCCCACCA +
Preference number: 5 (lower is better)
Translates to: CAAARSHRGSASSCS*SRSSYTATQSWSPP
Trigger: TGGTGGGCTCCAAGACTGTGTCGCAGTGTAAGAACTTCTACTTCAACTACAAGAAGAGGCAGAACCTCGATGAGATCTTGCAGCAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000448614.1
ENST00000458234.5
CDS-3UTR CAA 90 bp GCCACAGAATACGCATCGAATTCATTCTGCCCAAGGAAGGGAGGGAGGGAGGACTGGGTAAGTCCTTCCTaGCGTAAAACATCTGAATTA +
Preference number: 5 (lower is better)
Translates to: ATEYASNSFCPRKGGREDWVSPS*RKTSEL
Trigger: TAATTCAGATGTTTTACGCAAGGAAGGACTTACCCA...GTCCTCCCTCCCTCCCTTCCTTGGGCAGAATGAATTCGATGCGTATTCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
CDS-3UTR CAA 90 bp AGTTTAGACTTTGGTTCCAAATGCATTCGGGGGAGGCAGTGGCGTGGAGGTGCGTGGGTAAGTCCTTCCTaGCGTAAAACATCTGAATTA +
Preference number: 5 (lower is better)
Translates to: SLDFGSKCIRGRQWRGGAWVSPS*RKTSEL
Trigger: TAATTCAGATGTTTTACGCAAGGAAGGACTTACCCA...CGCACCTCCACGCCACTGCCTCCCCCGAATGCATTTGGAACCAAAGTCTAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS-3UTR CAA 90 bp TCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGGTGATGCAGATCTTCTTGTTGATCTCTaGCTTCTTGGACTTGACCAT +
Preference number: 5 (lower is better)
Translates to: SLLCKPNRGFHEVAGDADLLVDL*LLGLDH
Trigger: ATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAG...ATCTGCATCACCCGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp ATACAAAGTGGTCAAATCGTCTTTCCGACCACTCGCTCCTTTGTAAACCAAACCCCAGGCTGGCTGATATaGTATTCAGGCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: IQSGQIVFPTTRSFVNQTPGWLI*YSGSFR
Trigger: CCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG...GGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAGACGATTTGACCACTTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp TTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTGTGTTGCCTGGAGACTaGGAGCCCATCCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FKLLLRMNHTNTKWSNRLVLPGD*EPILLG
Trigger: GCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACAC...AAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp CTTTCCGACCACTCGCTCCTTTGTAAACCAAACCGAGGCTTCCATGAGGTTGCGGTCTTTTCAGAACTTTaGTTAAACCAGCCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LSDHSLLCKPNRGFHEVAVFSEL*LNQPLL
Trigger: AAGCAAAGGCTGGTTTAACAAAAGTTCTGAAAAGAC...CGCAACCTCATGGAAGCCTCGGTTTGGTTTACAAAGGAGCGAGTGGTCGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp TGGAGTTTTAAACTTCTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATTCAGGCTCATTCCGGTaGTGGGTGTTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: WSFKLLLRMNHTNTKWSNSGSFR*WVFSFL
Trigger: CAAGAAGCTGAACACCCACAACCGGAATGAGCCTGA...ATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAGAAGTTTAAAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS-3UTR CAA 90 bp CTGCTCCGAATGAATCATACGAATACAAAGTGGTCAAATCGTCTTTCCGACCACCTGGAAAATTTCTTCTaGTGGACTAAAACTGTTCCG +
Preference number: 5 (lower is better)
Translates to: LLRMNHTNTKWSNRLSDHLENFF*WTKTVP
Trigger: CGGAACAGTTTTAGTCCACAAGAAGAAATTTTCCAG...GTGGTCGGAAAGACGATTTGACCACTTTGTATTCGTATGATTCATTCGGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS CAA 90 bp GCCTTGAGCGCCCCCTCGGCCGTGGCCTCAGCGGCCTCCGCGTCCTaGCCCTTGGCCGGCCCCTCCTCGGCTTCCTCCGTGCACTCGCTC +
Preference number: 6 (lower is better)
Translates to: ALSAPSAVASAASAS*PLAGPSSASSVHSL
Trigger: GAGCGAGTGCACGGAGGAAGCCGAGGAGGGGCCGGCCAAGGGCAAGGACGCGGAGGCCGCTGAGGCCACGGCCGAGGGGGCGCTCAAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp GGCTGCCCTCCTGCAGGCGCGGCGTGGGCTCCCGCGTaGTCACGGGCGAACCTCGTGGGAGGTGGCCGGCAA +
Preference number: 6 (lower is better)
Translates to: GCPPAGAAWAPA*SRANLVGGGRQ
Trigger: TTGCCGGCCACCTCCCACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGCCGCGCCTGCAGGAGGGCAGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp CCGAGGCCGAGGCAGGTGGCGCCGGCGGGTCCGGGCTaGCGTGGTGAGGTGCGAGGTTCTTCGCAGGGGTGC +
Preference number: 6 (lower is better)
Translates to: PRPRQVAPAGPG*RGEVRGSSQGC
Trigger: GCACCCCTGCGAAGAACCTCGCACCTCACCACGCCAGCCCGGACCCGCCGGCGCCACCTGCCTCGGCCTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp GGCTGGCTCTCAGGCAGCGGCCGCAGGTGTGGGAGGTaGGCGGCCTCCCCGCCAAGCTTCACGGGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: GWLSGSGRRCGR*AASPPSFTGPG
Trigger: GCCAGGCCCCGTGAAGCTTGGCGGGGAGGCCGCCCACCTCCCACACCTGCGGCCGCTGCCTGAGAGCCAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS CCA 72 bp ATGCCCCAGGGAGCGGGCCGAAGTGGGCCGGCAGGCTaGGCGGCCGCGGTCGGCTCTGCGAGGCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: MPQGAGRSGPAG*AAAVGSARLLV
Trigger: AACCAGCAGCCTCGCAGAGCCGACCGCGGCCGCCCAGCCTGCCGGCCCACTTCGGCCCGCTCCCTGGGGCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS CCA 72 bp CCGGGGGTCGCCAGTCGGGGTGAGGAGGCTGGGCCTTaGGGACAGCAGCCGGTTCTTGTCGCCGCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: PGVASRGEEAGP*GQQPVLVAALG
Trigger: GCCGAGGGCGGCGACAAGAACCGGCTGCTGTCCCCAAGGCCCAGCCTCCTCACCCCGACTGGCGACCCCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp CCGGGCGTCGGCCATCACATCCAGCGGGTGCACGGGTaGGAACGTCCGGCCGGGGCTGCCGATGAGGGAGCG +
Preference number: 6 (lower is better)
Translates to: PGVGHHIQRVHG*ERPAGAADEGA
Trigger: CGCTCCCTCATCGGCAGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTGGATGTGATGGCCGACGCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp CGGCGTGGGCTCCCGCGTGGTCACGGGCGAACCTCGTaGGAGGTGGCCGGCAAAGGGTGCCCCGTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: RRGLPRGHGRTS*EVAGKGCPVVL
Trigger: GAGGACCACGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp AGTCTTTTCCCGGTGCGGGTCCGAGGCCGAGGCAGGTaGCGCCGGCGGGTCCGGGCTGGCGTGGTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: SLFPVRVRGRGR*RRRVRAGVVRC
Trigger: GCACCTCACCACGCCAGCCCGGACCCGCCGGCGCCACCTGCCTCGGCCTCGGACCCGCACCGGGAAAAGACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 72 bp CAGGGCCTGCGTCTTGTAGGCCTCGGTCAGGTCCCGTaGGGGCGGTGGGGGCGGAGGCGTGCCCTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: QGLRLVGLGQVP*GRWGRRRALPL
Trigger: AAGCGGGAGGGCACGCCTCCGCCCCCACCGCCCTCACGGGACCTGACCGAGGCCTACAAGACGCAGGCCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp TTGAGCGGCCGCGGGGCCAGGGGCAGCTCGGGCGTGTaGCGCAGCTCCTCGCGCGGGATCTCATGGATGGAG +
Preference number: 6 (lower is better)
Translates to: LSGRGARGSSGV*RSSSRGISWME
Trigger: CTCCATCCATGAGATCCCGCGCGAGGAGCTGCGGCACACGCCCGAGCTGCCCCTGGCCCCGCGGCCGCTCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 72 bp TCCAGTGCCCGGGCGTCGGCCATCACATCCAGCGGGTaGACGGGTGGGAACGTCCGGCCGGGGCTGCCGATG +
Preference number: 6 (lower is better)
Translates to: SSARASAITSSG*TGGNVRPGLPM
Trigger: CATCGGCAGCCCCGGCCGGACGTTCCCACCCGTGCACCCGCTGGATGTGATGGCCGACGCCCGGGCACTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 72 bp CGTGCTCGCTGCGGGCGGCCGACATGGACAGCCCACTaGCCCGCTGGCCCACCCTCTGCATGCGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: RARCGRPTWTAH*PAGPPSACAPA
Trigger: TGCAGGAGCGCATGCAGAGGGTGGGCCAGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCAGCGAGCACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000429285.6
CDS CCA 72 bp GAGCCCAGAGCTGTCCCTCTCAGCACGGACGCCTCCTaGGCTGTGGGCACCCCCAGGCTCTCCGGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: EPRAVPLSTDAS*AVGTPRLSGGP
Trigger: TGGGCCACCGGAGAGCCTGGGGGTGCCCACAGCCCAGGAGGCGTCCGTGCTGAGAGGGACAGCTCTGGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp GCGTGTGCCGCAGCTCCTCGCGCGGGATCTCATGGATaGAGCGGCCCGCCTCCTTCACCGTGGCCACCAGGC +
Preference number: 6 (lower is better)
Translates to: ACAAAPRAGSHG*SGPPPSPWPPG
Trigger: GCCTGGTGGCCACGGTGAAGGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGAGGAGCTGCGGCACACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp TCGGGCGTGTGCCGCAGCTCCTCGCGCGGGATCTCATaGATGGAGCGGCCCGCCTCCTTCACCGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: SGVCRSSSRGIS*MERPASFTVAT
Trigger: GGTGGCCACGGTGAAGGAGGCGGGCCGCTCCATCCATGAGATCCCGCGCGAGGAGCTGCGGCACACGCCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp TGCTGGACGAAAGGCTGCCCTCCTGCAGGCGCGGCGTaGGCTCCCGCGTGGTCACGGGCGAACCTCGTGGGA +
Preference number: 6 (lower is better)
Translates to: CWTKGCPPAGAA*APAWSRANLVG
Trigger: TCCCACGAGGTTCGCCCGTGACCACGCGGGAGCCCACGCCGCGCCTGCAGGAGGGCAGCCTTTCGTCCAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp AGGGCATCCTGGGTCCGAGGGGAGATGGGCGAGTGCTaGTGGGCATGGGAGTGGGAGGCGGGGCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RASWVRGEMGEC*WAWEWEAGRLL
Trigger: CAGCAGCCGCCCCGCCTCCCACTCCCATGCCCACCAGCACTCGCCCATCTCCCCTCGGACCCAGGATGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440187.5
ENST00000453428.1
CDS TCA 72 bp CTGCGGACGAGGGCCTGTCCTCCCACACGCGGTTGGTaGGCGGCGTCCGGCGGTTGCAGTCTCCCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: LRTRACPPTRGW*AASGGCSLPPS
Trigger: ACTCGGAGGGAGACTGCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGACAGGCCCTCGTCCGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000413172.1
ENST00000418829.5
ENST00000429285.6
ENST00000443451.6
ENST00000464377.1
CDS GCA 72 bp CACGGGCGAACCTCGTGGGAGGTGGCCGGCAAAGGGTaGCCCGTGGTCCTCATAGGTCAGGGGGCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: HGRTSWEVAGKG*PVVLIGQGALP
Trigger: CGGCAGAGCCCCCTGACCTATGAGGACCACGGGGCACCCTTTGCCGGCCACCTCCCACGAGGTTCGCCCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp GTAGGCAAGGCGGTCCATGGCGGTGGCTGGGGTGCCTaGTGTCGGGGGCACGAGCACAGGCAGGTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: VGKAVHGGGWGA*CRGHEHRQVWH
Trigger: GTGCCACACCTGCCTGTGCTCGTGCCCCCGACACCAGGCACCCCAGCCACCGCCATGGACCGCCTTGCCTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp GAGGTGCGAGGTTCTTCGCAGGGGTGCGGGCGATGGTaGCGTGGCCAGAGACAGGAGGCACTAGGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: EVRGSSQGCGRW*RGQRQEALGAG
Trigger: CCCGGCCCCTAGTGCCTCCTGTCTCTGGCCACGCCACCATCGCCCGCACCCCTGCGAAGAACCTCGCACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp GAGCCCGACGTCCGTGTGCGTCCGGGCGATCTGCACTaGGTAGGAAAGGCTGTGGGGCGGGTAGCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: EPDVRVRPGDLH*VGKAVGRVAGL
Trigger: GAGCCCCGCTACCCGCCCCACAGCCTTTCCTACCCAGTGCAGATCGCCCGGACGCACACGGACGTCGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542565.1
CDS CCA 72 bp GGCTGGAACTCAGACAGCAGGGAGGGCCTCCGCCGCTaGGGCTGGATGATGGAGCCGGGCGACAGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: GWNSDSREGLRR*GWMMEPGDRWE
Trigger: CTCCCACCTGTCGCCCGGCTCCATCATCCAGCCCCAGCGGCGGAGGCCCTCCCTGCTGTCTGAGTTCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542565.1
CDS CAA 90 bp GAGGGCCTGTCCTCCCACACGCGGTTGGTGAGCGGCGTCCGGCGGTaGCAGTCTCCCTCCGAGTGCACTGAGGAGACAGAGGGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: EGLSSHTRLVSGVRR*QSPSECTEETEGGR
Trigger: CCGGCCACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCTCACCAACCGCGTGTGGGAGGACAGGCCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000413172.1
ENST00000418829.5
ENST00000429285.6
ENST00000443451.6
ENST00000464377.1
CDS GCA 72 bp GTCCGGCCGGGGCTGCCGATGAGGGAGCGTACGTCGTaGTTTTTGGAGCCAGTGGTGGACGCGCCGGTGTCG +
Preference number: 6 (lower is better)
Translates to: VRPGLPMRERTS*FLEPVVDAPVS
Trigger: CGACACCGGCGCGTCCACCACTGGCTCCAAAAAGCACGACGTACGCTCCCTCATCGGCAGCCCCGGCCGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 72 bp GGGCGGGTAGCGGGGCTCAGTGGCCCTCCACGTCTGTaGCACAGGCTGTGTGGATCCCGACATGGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: GRVAGLSGPPRL*HRLCGSRHGGG
Trigger: CCCACCACCATGTCGGGATCCACACAGCCTGTGGCACAGACGTGGAGGGCCACTGAGCCCCGCTACCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542565.1
CDS GCA 72 bp AGCCAGACCCAGCTCCTCCTCGACAGCGCAGGTCCCTaGCCCGCCTCAGCTTCTCCTTGCACCGCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SQTQLLLDSAGP*PASASPCTACL
Trigger: GAGGCAGGCGGTGCAAGGAGAAGCTGAGGCGGGGCAGGGACCTGCGCTGTCGAGGAGGAGCTGGGTCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 72 bp CATCCTCCACCACGGGCGGGAATGCAGCCTCCTCGCTaGCCGCCGCCGGCGCTTTCTTCTTCTTCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: HPPPRAGMQPPR*PPPALSSSSSA
Trigger: CGCGGAGGAAGAAGAAGAAAGCGCCGGCGGCGGCCAGCGAGGAGGCTGCATTCCCGCCCGTGGTGGAGGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000448614.1
ENST00000458234.5
CDS CCA 72 bp ATGGACCCGCGGATGTGGTGCTGCTCTTTGAGGTGGTaGGGGCTGTGTCGCTCCGGCGGGATGGCACGGCCC +
Preference number: 6 (lower is better)
Translates to: MDPRMWCCSLRW*GLCRSGGMARP
Trigger: GGGCCGTGCCATCCCGCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCAGCACCACATCCGCGGGTCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000473999.2
CDS CCA 72 bp GTGGGGGCGGAGGCGTGCCCTCCCGCTTTAGGAGCTTaGCCTCCCGACGCAGGTAGTCCTCCTGTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: VGAEACPPALGA*PPDAGSPPVPP
Trigger: TGGAGGCACAGGAGGACTACCTGCGTCGGGAGGCCAAGCTCCTAAAGCGGGAGGGCACGCCTCCGCCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp TCGCGGGGCGAGAGGCCCCTCAGCATATCAGCTCGCTaGGCCATGGCGGTGGCCGCGTTGTGGTGCATCTGC +
Preference number: 6 (lower is better)
Translates to: SRGERPLSISAR*AMAVAALWCIC
Trigger: GCAGATGCACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCTGAGGGGCCTCTCGCCCCGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CCA 72 bp GGTGTCGGGGGCACGAGCACAGGCAGGTGTGGCACTTaGGACAGGTCGATGATGCCTCGGGGACCCGCAGCG +
Preference number: 6 (lower is better)
Translates to: GVGGTSTGRCGT*DRSMMPRGPAA
Trigger: CGCTGCGGGTCCCCGAGGCATCATCGACCTGTCCCAAGTGCCACACCTGCCTGTGCTCGTGCCCCCGACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp GTCTCTGCTGGAGGGCATCCTGGGTCCGAGGGGAGATaGGCGAGTGCTGGTGGGCATGGGAGTGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: VSAGGHPGSEGR*ASAGGHGSGRR
Trigger: CCGCCTCCCACTCCCATGCCCACCAGCACTCGCCCATCTCCCCTCGGACCCAGGATGCCCTCCAGCAGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440187.5
ENST00000453428.1
CDS CCA 72 bp GGTGAGGTGCGAGGTTCTTCGCAGGGGTGCGGGCGATaGTGGCGTGGCCAGAGACAGGAGGCACTAGGGGCC +
Preference number: 6 (lower is better)
Translates to: GEVRGSSQGCGR*WRGQRQEALGA
Trigger: GGCCCCTAGTGCCTCCTGTCTCTGGCCACGCCACCATCGCCCGCACCCCTGCGAAGAACCTCGCACCTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp TCCACGTCTGTGCCACAGGCTGTGTGGATCCCGACATaGTGGTGGGGGTCGGCGGGGAGCTGCTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: STSVPQAVWIPT*WWGSAGSCSQA
Trigger: GGCCTGGGAGCAGCTCCCCGCCGACCCCCACCACCATGTCGGGATCCACACAGCCTGTGGCACAGACGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542565.1
CDS CCA 72 bp GCTCAGTGGCCCTCCACGTCTGTGCCACAGGCTGTGTaGATCCCGACATGGTGGTGGGGGTCGGCGGGGAGC +
Preference number: 6 (lower is better)
Translates to: AQWPSTSVPQAV*IPTWWWGSAGS
Trigger: GCTCCCCGCCGACCCCCACCACCATGTCGGGATCCACACAGCCTGTGGCACAGACGTGGAGGGCCACTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542565.1
CDS CCA 72 bp CGCAGGTGGAGCTCCTGGGACCGTTCATTCCCGGGCTaGAACTCAGACAGCAGGGAGGGCCTCCGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: RRWSSWDRSFPG*NSDSREGLRRW
Trigger: CCAGCGGCGGAGGCCCTCCCTGCTGTCTGAGTTCCAGCCCGGGAATGAACGGTCCCAGGAGCTCCACCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 90 bp CGAGGGATCCCTTGTGTGATGGACCCGCGGATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGTCGCTCCGGCGGGATGGCACGGCCC +
Preference number: 6 (lower is better)
Translates to: RGIPCVMDPRMWCCS*RWWGLCRSGGMARP
Trigger: GGGCCGTGCCATCCCGCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCAGCACCACATCCGCGGGTCCATCACACAAGGGATCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp TCACTGATGTGCTGGGCCAGGGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCGGTCTGGAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: SLMCWARVTTRW*PLTPGAVWSSG
Trigger: CCCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACATCAGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS TCA 72 bp ACACTGATGTGCTGGGCCAGGGTGACCACCCGCTGGTaGCCTTTGACCCCTGGGGCGGTCTGGAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: TLMCWARVTTRW*PLTPGAVWSSG
Trigger: CCCGCTGCTCCAGACCGCCCCAGGGGTCAAAGGTCACCAGCGGGTGGTCACCCTGGCCCAGCACATCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 72 bp CTCTCCGGTGGCCCAGCCTGGCCCCGTGGGGACAGCTaGTCCTGCTTCACTCCGCTGAAGGGTGCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: LSGGPAWPRGDS*SCFTPLKGASF
Trigger: AAAGCTGGCACCCTTCAGCGGAGTGAAGCAGGAGCAGCTGTCCCCACGGGGCCAGGCTGGGCCACCGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp GTGAGCGGCGTCCGGCGGTTGCAGTCTCCCTCCGAGTaGACTGAGGAGACAGAGGGTGGCCGGTCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: VSGVRRLQSPSE*TEETEGGRSPD
Trigger: ATCTGGGGACCGGCCACCCTCTGTCTCCTCAGTGCACTCGGAGGGAGACTGCAACCGCCGGACGCCGCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000413172.1
ENST00000418829.5
ENST00000429285.6
ENST00000443451.6
ENST00000464377.1
CDS GCA 72 bp GGTCCCTGCCCCGCCTCAGCTTCTCCTTGCACCGCCTaGCTCCACTTCCCCCAGTCCGACAGCATCCAGGCA +
Preference number: 6 (lower is better)
Translates to: GPCPASASPCTA*LHFPQSDSIQA
Trigger: TGCCTGGATGCTGTCGGACTGGGGGAAGTGGAGGCAGGCGGTGCAAGGAGAAGCTGAGGCGGGGCAGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 72 bp TCGTCTGCACTGCAGGTAGCACTGGAGTCGCTGTCCTaGGGGGCGCCCGAGCTCTTGGCTGTGGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: SSALQVALESLS*GAPELLAVVAL
Trigger: CAGGGCCACCACAGCCAAGAGCTCGGGCGCCCCCCAGGACAGCGACTCCAGTGCTACCTGCAGTGCAGACGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp CGGCTGCGTCCAGAGGGATGCCGCGGGGTATGGAGGTaGGGTCGAAGGCCAGGGGGATGTGGCTGCGATACA +
Preference number: 6 (lower is better)
Translates to: RLRPEGCRGVWR*GRRPGGCGCDT
Trigger: TGTATCGCAGCCACATCCCCCTGGCCTTCGACCCCACCTCCATACCCCGCGGCATCCCTCTGGACGCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp GCGAGAGGCCCCTCAGCATATCAGCTCGCTGGGCCATaGCGGTGGCCGCGTTGTGGTGCATCTGCTGCGAGG +
Preference number: 6 (lower is better)
Translates to: ARGPSAYQLAGP*RWPRCGASAAR
Trigger: CCTCGCAGCAGATGCACCACAACGCGGCCACCGCCATGGCCCAGCGAGCTGATATGCTGAGGGGCCTCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CAA 72 bp TCGCGCACCTTGCTCTCCTTGGCCCGCCGCCGGGGGTaGTTCTCGATGCGCTCCACCTTCTTCTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SRTLLSLARRRG*FSMRSTFFSQA
Trigger: GGCCTGGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CAA 90 bp GGGCATGGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTaGTTGCTGCTGCTGGCTCTTGCCGCGGCGCCGATAGCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: GHGLLLLLLLLLLLL*LLLLALAAAPIAPS
Trigger: AGACGGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 90 bp AGGGCAGTACCTTGTGTGATGGACCCGCGGATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGTCGCTCCGGCGGGATGGCACGGCCC +
Preference number: 6 (lower is better)
Translates to: RAVPCVMDPRMWCCS*RWWGLCRSGGMARP
Trigger: GGGCCGTGCCATCCCGCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCAGCACCACATCCGCGGGTCCATCACACAAGGTACTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS TCA 72 bp CCTTGTCGTGGGTCAGACTGGGTGAGCTCACAGGGCTaGCGGGCTCCACCCCTTCGGGGCTGTAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PCRGSDWVSSQG*RAPPLRGCSCC
Trigger: GCAGCAGCTACAGCCCCGAAGGGGTGGAGCCCGTCAGCCCTGTGAGCTCACCCAGTCTGACCCACGACAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS TCA 72 bp ACACTCTGGCTGTGTCTCTCCCTCCCGCGCCCTGCGTaGCTGTACACCCGTTGGGGGCAACGAGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: TLWLCLSLPRPA*LYTRWGQRGSR
Trigger: CCTGCTCCCTCGTTGCCCCCAACGGGTGTACAGTCACGCAGGGCGCGGGAGGGAGAGACACAGCCAGAGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS GCA 72 bp CTGCTGCGGGGCATGGGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGTTGTTGCTGCTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LLRGMGCCCCCC*CCCCCCCCCWL
Trigger: GAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp GCTCTTCAGGCTCTCCTCGTAGCAGGCACGTTCCAGTaGCCGGGCGTCGGCCATCACATCCAGCGGGTGCAC +
Preference number: 6 (lower is better)
Translates to: ALQALLVAGTFQ*PGVGHHIQRVH
Trigger: GTGCACCCGCTGGATGTGATGGCCGACGCCCGGGCACTGGAACGTGCCTGCTACGAGGAGAGCCTGAAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 72 bp CACCACACTCTGGCTGTGTCTCTCCCTCCCGCGCCCTaGGTGACTGTACACCCGTTGGGGGCAACGAGGGAG +
Preference number: 6 (lower is better)
Translates to: HHTLAVSLPPAP*VTVHPLGATRE
Trigger: CTCCCTCGTTGCCCCCAACGGGTGTACAGTCACGCAGGGCGCGGGAGGGAGAGACACAGCCAGAGTGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 72 bp GTGGGTGGTGCTCGGGCACGGTGCTGTGCGGGGACTTaGCGATCTCACGAGGCGTCGACGTCAGCTTTCGGT +
Preference number: 6 (lower is better)
Translates to: VGGARARCCAGT*RSHEASTSAFG
Trigger: ACCGAAAGCTGACGTCGACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCACCGTGCCCGAGCACCACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CCA 72 bp GTACAGCAGCGGGTACACAGCACTCCGGGAGTGCCCTaGCTCCGTCATGCCCTCCGGTGGGGACACAGGTTC +
Preference number: 6 (lower is better)
Translates to: VQQRVHSTPGVP*LRHALRWGHRF
Trigger: GAACCTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGTGCTGTGTACCCGCTGCTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CCA 72 bp GGTAGGAAAGGCTGTGGGGCGGGTAGCGGGGCTCAGTaGCCCTCCACGTCTGTGCCACAGGCTGTGTGGATC +
Preference number: 6 (lower is better)
Translates to: GRKGCGAGSGAQ*PSTSVPQAVWI
Trigger: GATCCACACAGCCTGTGGCACAGACGTGGAGGGCCACTGAGCCCCGCTACCCGCCCCACAGCCTTTCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542565.1
CDS CCA 72 bp CCACCTGGAAACCACACAAAGCACTCGGTGAGGAGCTaGGCACGGGCCCAGGACCACGGTGGGCAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: PPGNHTKHSVRS*ARAQDHGGQAG
Trigger: TCCTGCCTGCCCACCGTGGTCCTGGGCCCGTGCCCAGCTCCTCACCGAGTGCTTTGTGTGGTTTCCAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 72 bp GGTGGCAAAGCCCCTCGACGTAAACCACCCGGGAGGTaGTTTCTGGCTAGGGCCTCTGCACCCTCACGGGGG +
Preference number: 6 (lower is better)
Translates to: GGKAPRRKPPGR*FLARASAPSRG
Trigger: CCCCCGTGAGGGTGCAGAGGCCCTAGCCAGAAACCACCTCCCGGGTGGTTTACGTCGAGGGGCTTTGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494460.1
CDS CAA 72 bp TGTGGGTGGTGCTCGGGCACGGTGCTGTGCGGGGACTaGGCGATCTCACGAGGCGTCGACGTCAGCTTTCGG +
Preference number: 6 (lower is better)
Translates to: CGWCSGTVLCGD*AISRGVDVSFR
Trigger: CCGAAAGCTGACGTCGACGCCTCGTGAGATCGCCAAGTCCCCGCACAGCACCGTGCCCGAGCACCACCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CAA 90 bp CATGGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTaGCTGCTGCTGGCTCTTGCCGCGGCGCCGATAGCTCCGTCTCAC +
Preference number: 6 (lower is better)
Translates to: HGLLLLLLLLLLLLL*LLLALAAAPIAPSH
Trigger: GTGAGACGGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 90 bp AAGCGACTCGGGCTGTCCTCGCCGATGATCCTGGTGATGGTGCCCTaGTACAGGACGTCAGCTGGCGTGCCGTGGGTGATGGAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: KRLGLSSPMILVMVP*YRTSAGVPWVMEPR
Trigger: CCGCGGCTCCATCACCCACGGCACGCCAGCTGACGTCCTGTACAAGGGCACCATCACCAGGATCATCGGCGAGGACAGCCCGAGTCGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp GCAACCACGTCAATGGGTGCAAAGCCACACAGGTGCTaGGTGTGGGAGGCGCCCGGCCCTTGTGTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: ATTSMGAKPHRC*VWEAPGPCVGG
Trigger: CCCTCCCACACAAGGGCCGGGCGCCTCCCACACTCAGCACCTGTGTGGCTTTGCACCCATTGACGTGGTTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS TCA 72 bp CAGACATGCCACCTGGAAACCACACAAAGCACTCGGTaGGGAGCTGGGCACGGGCCCAGGACCACGGTGGGC +
Preference number: 6 (lower is better)
Translates to: QTCHLETTQSTR*GAGHGPRTTVG
Trigger: GCCCACCGTGGTCCTGGGCCCGTGCCCAGCTCCTCACCGAGTGCTTTGTGTGGTTTCCAGGTGGCATGTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS GCA 72 bp GCTGCTGCTGCTGCTGTTGTTGCTGCTGCTGGCTCTTaGCGCGGCGCCGATAGCTCCGTCTCACCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: AAAAAVVAAAGS*RGADSSVSPGS
Trigger: AGAGCCTGGTGAGACGGAGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp CTGCGGGGCATGGGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGTTGTTGCTGCTGCTGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LRGMGCCCCCCC*CCCCCCCCWLL
Trigger: CAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp CTCACGAGGCGTCGACGTCAGCTTTCGGTCCTGGGATaGCTTGCTGGACGAAAGGCTGCCCTCCTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: LTRRRRQLSVLG*LAGRKAALLQA
Trigger: CGCCTGCAGGAGGGCAGCCTTTCGTCCAGCAAGGCATCCCAGGACCGAAAGCTGACGTCGACGCCTCGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS GCA 72 bp TCGGCCAAGTTTTCCGGAAACATAGGGCTGGGAAGATaGCCCAGGGAGCGGGCCGAAGTGGGCCGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: SAKFSGNIGLGR*PRERAEVGRQA
Trigger: AGCCTGCCGGCCCACTTCGGCCCGCTCCCTGGGGCATCTTCCCAGCCCTATGTTTCCGGAAAACTTGGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS CCA 72 bp AGCTCGGGCAGGTATGAGTGGGACTCTGGCCGCAGGTaGAGCTCCTGGGACCGTTCATTCCCGGGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SSGRYEWDSGRR*SSWDRSFPGWN
Trigger: GTTCCAGCCCGGGAATGAACGGTCCCAGGAGCTCCACCTGCGGCCAGAGTCCCACTCATACCTGCCCGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp AGCAGGACCCAGGAGCTTTTCCAGGGGGTTGCACGGTaGGAGATGCAGGGCACGCTGCCTGCACCCTGTACC +
Preference number: 6 (lower is better)
Translates to: SRTQELFQGVAR*EMQGTLPAPCT
Trigger: GGTACAGGGTGCAGGCAGCGTGCCCTGCATCTCCCACCGTGCAACCCCCTGGAAAAGCTCCTGGGTCCTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 72 bp AAGCCCCTCGACGTAAACCACCCGGGAGGTGGTTTCTaGCTAGGGCCTCTGCACCCTCACGGGGGATGCCAG +
Preference number: 6 (lower is better)
Translates to: KPLDVNHPGGGF*LGPLHPHGGCQ
Trigger: CTGGCATCCCCCGTGAGGGTGCAGAGGCCCTAGCCAGAAACCACCTCCCGGGTGGTTTACGTCGAGGGGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494460.1
CDS CCA 72 bp AGGCAGCAACTCTCTCCTCACCGTTCATTCCCGGGCTaGAACTCAGACAGCAGGGAGGGCCTCCGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: RQQLSPHRSFPG*NSDSREGLRRW
Trigger: CCAGCGGCGGAGGCCCTCCCTGCTGTCTGAGTTCCAGCCCGGGAATGAACGGTGAGGAGAGAGTTGCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542565.1
CDS CAA 72 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTaGCTGCTGCTGGCTCTTGCCGCGGCGCCGATAGCT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*LLLALAAAPIA
Trigger: AGCTATCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTaGTTGCTGCTGCTGGCTCTTGCCGCGGCGCCGATA +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*LLLLALAAAPI
Trigger: TATCGGCGCCGCGGCAAGAGCCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp GCGCTGTCCGAGGGCACCCGTGTGCTGGGAATGCCTTaGGTGATGCTTCCGCCCGGAACTGAGCCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ALSEGTRVLGMP*VMLPPGTEPRA
Trigger: AGCTCTGGGCTCAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCAGCACACGGGTGCCCTCGGACAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp CCTTGTGTGATGGACCCGCGGATGTGGTGCTGCTCTTaGAGGTGGTGGGGGCTGTGTCGCTCCGGCGGGATG +
Preference number: 6 (lower is better)
Translates to: PCVMDPRMWCCS*RWWGLCRSGGM
Trigger: CATCCCGCCGGAGCGACACAGCCCCCACCACCTCAAAGAGCAGCACCACATCCGCGGGTCCATCACACAAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000473999.2
CDS CAA 72 bp CCGGGGCTGCCGATGAGGGAGCGTACGTCGTGCTTTTaGGAGCCAGTGGTGGACGCGCCGGTGTCGTACTTG +
Preference number: 6 (lower is better)
Translates to: PGLPMRERTSCF*EPVVDAPVSYL
Trigger: CAAGTACGACACCGGCGCGTCCACCACTGGCTCCAAAAAGCACGACGTACGCTCCCTCATCGGCAGCCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CAA 72 bp GACTTGGCTTTTCGGCTGCTGGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCTGGCGAGGTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: DLAFRLLGLPET*AFPPPPGEVSV
Trigger: CACACTCACCTCGCCAGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000413172.1
ENST00000429285.6
ENST00000464377.1
CDS CAA 72 bp GACTTGGCTTTTCGGCTGCTGGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCTGTTCCGGTGATGGCG +
Preference number: 6 (lower is better)
Translates to: DLAFRLLGLPET*AFPPPPVPVMA
Trigger: CGCCATCACCGGAACAGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443451.6
CDS CAA 72 bp GCCACACAGGTGCTGAGTGTGGGAGGCGCCCGGCCCTaGTGTGGGAGGGATCCAACCCCTGGTCCCAGTATT +
Preference number: 6 (lower is better)
Translates to: ATQVLSVGGARP*CGRDPTPGPSI
Trigger: AATACTGGGACCAGGGGTTGGATCCCTCCCACACAAGGGCCGGGCGCCTCCCACACTCAGCACCTGTGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 72 bp CCCTGCAGGCCTGGGACGGGTACCTCAATACCCACCTaGATTCCACCCGCGCTTCGGTGGCAAAGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: PCRPGTGTSIPT*IPPALRWQSPS
Trigger: CGAGGGGCTTTGCCACCGAAGCGCGGGTGGAATCAAGGTGGGTATTGAGGTACCCGTCCCAGGCCTGCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494460.1
CDS CAA 90 bp TCCAGGTGGCTCTTGTCGAGCTCTTCCAGGTGCTTGGGGAGCCCCTaGTCGTGGGTCAGACTGGGTGAGCTCACAGGGCTGACGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SRWLLSSSSRCLGSP*SWVRLGELTGLTGS
Trigger: GGAGCCCGTCAGCCCTGTGAGCTCACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGACAAGAGCCACCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS CAA 90 bp GCTCTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTGGACCTCCTCGGGGACCCGCAGCGT +
Preference number: 6 (lower is better)
Translates to: ALDPGLAPARTRTWW*VLSSVLDLLGDPQR
Trigger: ACGCTGCGGGTCCCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS TCA 72 bp CATGGTGACAGGGCCCACCGGGGCCTTGGCATGCTCTaGGTACGGGACGTGGAGCTGGACCGACATTCCTTG +
Preference number: 6 (lower is better)
Translates to: HGDRAHRGLGML*VRDVELDRHSL
Trigger: CAAGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCCCCGGTGGGCCCTGTCACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000536195.1
CDS TCA 72 bp GCTGGGAATGCCTTTGGTGATGCTTCCGCCCGGAACTaGGCCCAGAGCTGTCCCTCTCAGCACGGACGCCTC +
Preference number: 6 (lower is better)
Translates to: AGNAFGDASARN*AQSCPSQHGRL
Trigger: GAGGCGTCCGTGCTGAGAGGGACAGCTCTGGGCTCAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp TGTCCGAGGGCACCCGTGTGCTGGGAATGCCTTTGGTaGTGCTTCCGCCCGGAACTGAGCCCAGAGCTGTCC +
Preference number: 6 (lower is better)
Translates to: CPRAPVCWECLW*CFRPELSPELS
Trigger: GGACAGCTCTGGGCTCAGTTCCGGGCGGAAGCATCACCAAAGGCATTCCCAGCACACGGGTGCCCTCGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp CCTGCAGGCCTGGGACGGGTACCTCAATACCCACCTTaGTTCCACCCGCGCTTCGGTGGCAAAGCCCCTCGA +
Preference number: 6 (lower is better)
Translates to: PAGLGRVPQYPP*FHPRFGGKAPR
Trigger: TCGAGGGGCTTTGCCACCGAAGCGCGGGTGGAATCAAGGTGGGTATTGAGGTACCCGTCCCAGGCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494460.1
CDS GCA 72 bp TCATCTTTCTCCTCCTGGCTGCTGCGGGGCATGGGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SSFSSWLLRGMG*CCCCCCCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp GGTACACAGCACTCCGGGAGTGCCCTGGCTCCGTCATaGCCTCCGGTGGGGACACAGGTTCAATACCGTCCT +
Preference number: 6 (lower is better)
Translates to: GTQHSGSALAPS*PPVGTQVQYRP
Trigger: AGGACGGTATTGAACCTGTGTCCCCACCGGAGGGCATGACGGAGCCAGGGCACTCCCGGAGTGCTGTGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS GCA 72 bp TGCTCTGAGAGGCCATCGATGATCTCTGACACCTCGTaGTCGCTGCGGGCGGCCGACATGGACAGCCCACTG +
Preference number: 6 (lower is better)
Translates to: CSERPSMISDTS*SLRAADMDSPL
Trigger: CAGTGGGCTGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000494460.1
CDS GCA 72 bp TCTTGGAGCCCACCATCCGGGCGATGGCCGACCAGTTaGGGCCGTGTTCCAGGAGACATCCTCTCATTCGCG +
Preference number: 6 (lower is better)
Translates to: SWSPPSGRWPTS*GRVPGDILSFA
Trigger: CGCGAATGAGAGGATGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS GCA 72 bp GGGAGGTGGTCAGCAGGGCCACTTAGCTTTCGAAGGTaGACCGTGGGTTTCTGCCACTGGGCGGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GRWSAGPLSFRR*TVGFCHWAAPA
Trigger: AGCTGGAGCCGCCCAGTGGCAGAAACCCACGGTGCACCTTCGAAAGCTAAGTGGCCCTGCTGACCACCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 72 bp CACGCTGCCTGCACCCTGTACCCTAGCCCTCCAGGGTaGTCTGTCTGCAAGCAAGGGTGTGCCTGTGACCAC +
Preference number: 6 (lower is better)
Translates to: HAACTLYPSPPG*SVCKQGCACDH
Trigger: GTGGTCACAGGCACACCCTTGCTTGCAGACAGAGCACCCTGGAGGGCTAGGGTACAGGGTGCAGGCAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 72 bp CCTTCTCATCTTTCTCCTCCTGGCTGCTGCGGGGCATaGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: PSHLSPPGCCGA*AAAAAAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATGCCCCGCAGCAGCCAGGAGGAGAAAGATGAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp ACTGCGACACAGTCTTGGAGCCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGTGTTCCAGGAGACCTT +
Preference number: 6 (lower is better)
Translates to: TATQSWSPPSGR*PTSCGRVPGDL
Trigger: AAGGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp CCCACCGGGGCCTTGGCATGCTCTGAGTACGGGACGTaGAGCTGGACCGACATTCCTTGGGAGATGGCACCT +
Preference number: 6 (lower is better)
Translates to: PTGALACSEYGT*SWTDIPWEMAP
Trigger: AGGTGCCATCTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCCCCGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000536195.1
CDS CCA 72 bp CCTCCAGGTGGCTCTTGTCGAGCTCTTCCAGGTGCTTaGGGAGCCCCTTGTCGTGGGTCAGACTGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: PPGGSCRALPGA*GAPCRGSDWVS
Trigger: GCTCACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGACAAGAGCCACCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS CCA 72 bp CTTGCTGAAGAAGGCTGGCGGCTGGCTGGTGTTGCCTaGAGACTTGGAGCCCATCCTGCTGGGCTCCGTCTG +
Preference number: 6 (lower is better)
Translates to: LAEEGWRLAGVA*RLGAHPAGLRL
Trigger: CAGACGGAGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000461081.2
CDS CCA 72 bp TTGGCCTTCCCGCCGCCACCTGGCGAGGTGAGTGTGTaGTCACTCCGTCCGTCAGCAGCGGTTATGGGCATA +
Preference number: 6 (lower is better)
Translates to: LAFPPPPGEVSV*SLRPSAAVMGI
Trigger: TATGCCCATAACCGCTGCTGACGGACGGAGTGACCACACACTCACCTCGCCAGGTGGCGGCGGGAAGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000413172.1
ENST00000429285.6
ENST00000464377.1
CDS CCA 72 bp TCCATCTCTGACTTCCCCAGCTCGGGCAGGTATGAGTaGGACTCTGGCCGCAGGTGGAGCTCCTGGGACCGT +
Preference number: 6 (lower is better)
Translates to: SISDFPSSGRYE*DSGRRWSSWDR
Trigger: ACGGTCCCAGGAGCTCCACCTGCGGCCAGAGTCCCACTCATACCTGCCCGAGCTGGGGAAGTCAGAGATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp GTCCATGTTCTGGATCAGCTCCTCCTTGGACAGCCGTaGCGGCACCAGCTCCAGCTCAGGGTCAGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: VHVLDQLLLGQP*RHQLQLRVSVR
Trigger: CCGCACACTGACCCTGAGCTGGAGCTGGTGCCGCCACGGCTGTCCAAGGAGGAGCTGATCCAGAACATGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CCA 72 bp ACTGCTTCTCGTAGTACTCGCGCACCTTGCTCTCCTTaGCCCGCCGCCGGGGGTTGTTCTCGATGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: TASRSTRAPCSP*PAAGGCSRCAP
Trigger: TGGAGCGCATCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACTACGAGAAGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CCA 72 bp CCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTGGTTaGTTTTGTCAAGTGTGTTGGACCTCCTCGGGGACC +
Preference number: 6 (lower is better)
Translates to: PVSLPLGRGRGG*FCQVCWTSSGT
Trigger: GGTCCCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS CCA 72 bp ACTGCGACACAGTCTTGGAGCCCACCATCCGGGCGATaGCCGACCAGTTGCGGCCGTGTTCCAGGAGACATC +
Preference number: 6 (lower is better)
Translates to: TATQSWSPPSGR*PTSCGRVPGDI
Trigger: GATGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGACTGTGTCGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS CCA 72 bp ACAGGTGCTGAGTGTGGGAGGCGCCCGGCCCTTGTGTaGGAGGGATCCAACCCCTGGTCCCAGTATTCATGC +
Preference number: 6 (lower is better)
Translates to: TGAECGRRPALV*EGSNPWSQYSC
Trigger: GCATGAATACTGGGACCAGGGGTTGGATCCCTCCCACACAAGGGCCGGGCGCCTCCCACACTCAGCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 72 bp GAGCGGGTGATGCGGCCTTTGCGTCTTCCCTGGCTGTaGGCAGTTTTGCGGCCTTTGGAGGCCACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: ERVMRPLRLPWL*AVLRPLEATAS
Trigger: GGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGGCCGCATCACCCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp GGGCTGTCCTCGCCGATGATCCTGGTGATGGTGCCCTaGTACAGGACGTCAGCTGGCGTGCCGTGGGTGATG +
Preference number: 6 (lower is better)
Translates to: GLSSPMILVMVP*YRTSAGVPWVM
Trigger: CATCACCCACGGCACGCCAGCTGACGTCCTGTACAAGGGCACCATCACCAGGATCATCGGCGAGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp TTTTTGGAGCCAGTGGTGGACGCGCCGGTGTCGTACTaGAGCGGGGTGCCCTGCGTGATGGAGCCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: FLEPVVDAPVSY*SGVPCVMEPSL
Trigger: CAAGGAGGGCTCCATCACGCAGGGCACCCCGCTCAAGTACGACACCGGCGCGTCCACCACTGGCTCCAAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CAA 72 bp CCCTCCAGGTGGCTCTTGTCGAGCTCTTCCAGGTGCTaGGGGAGCCCCTTGTCGTGGGTCAGACTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: PSRWLLSSSSRC*GSPLSWVRLGE
Trigger: CTCACCCAGTCTGACCCACGACAAGGGGCTCCCCAAGCACCTGGAAGAGCTCGACAAGAGCCACCTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000461081.2
CDS CAA 72 bp AAGAAGGCTGGCGGCTGGCTGGTGTTGCCTGGAGACTaGGAGCCCATCCTGCTGGGCTCCGTCTGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: KKAGGWLVLPGD*EPILLGSVCSP
Trigger: TGGGGAACAGACGGAGCCCAGCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000461081.2
CDS CAA 72 bp CTCGCTCCCGCTCGGACGAGGACGTGGTGGTTGGTTTaGTCAAGTGTGTTGGACCTCCTCGGGGACCCGCAG +
Preference number: 6 (lower is better)
Translates to: LAPARTRTWWLV*SSVLDLLGDPQ
Trigger: CTGCGGGTCCCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS CAA 72 bp CCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTGGACCTCCTCGGGGAC +
Preference number: 6 (lower is better)
Translates to: PGLAPARTRTWW*VLSSVLDLLGD
Trigger: GTCCCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS CAA 72 bp GTCTTGGAGCCCACCATCCGGGCGATGGCCGACCAGTaGCGGCCGTGTTCCAGGAGACATCCTCTCATTCGC +
Preference number: 6 (lower is better)
Translates to: VLEPTIRAMADQ*RPCSRRHPLIR
Trigger: GCGAATGAGAGGATGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448614.1
CDS CAA 90 bp GACGGTCGCAGCAGGGGGTCAGGCAGCAGCTCTAGCCGAGGGCGCTaGCTTTCAATGAACTCCATCTCTGACTTCCCCAGCTCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: DGRSRGSGSSSSRGR*LSMNSISDFPSSGR
Trigger: CCTGCCCGAGCTGGGGAAGTCAGAGATGGAGTTCATTGAAAGCAAGCGCCCTCGGCTAGAGCTGCTGCCTGACCCCCTGCTGCGACCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CAA 90 bp GTGATCTCTCGGTCCACGCGGTCCATGTTCTGGATCAGCTCCTCCTaGGACAGCCGTGGCGGCACCAGCTCCAGCTCAGGGTCAGTGTGC +
Preference number: 6 (lower is better)
Translates to: VISRSTRSMFWISSS*DSRGGTSSSSGSVC
Trigger: GCACACTGACCCTGAGCTGGAGCTGGTGCCGCCACGGCTGTCCAAGGAGGAGCTGATCCAGAACATGGACCGCGTGGACCGAGAGATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CAA 90 bp GGGTGCAAAGCCACACAGGTGCTGAGTGTGGGAGGCGCCCGGCCCTaGTGTGGGAGGGATCCAACCCCTGGTCCCAGTATTCATGCAGGT +
Preference number: 6 (lower is better)
Translates to: GCKATQVLSVGGARP*CGRDPTPGPSIHAG
Trigger: ACCTGCATGAATACTGGGACCAGGGGTTGGATCCCTCCCACACAAGGGCCGGGCGCCTCCCACACTCAGCACCTGTGTGGCTTTGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS TCA 72 bp GAGAAACCTGGGCCACCAGGAAGGCCTCATTGCCCGTaGAGATGCCATCGGCTCGCATCACAGGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: EKPGPPGRPHCP*RCHRLASQAPP
Trigger: GGGAGGAGCCTGTGATGCGAGCCGATGGCATCTTCACGGGCAATGAGGCCTTCCTGGTGGCCCAGGTTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 72 bp TCTCAGGGAACTGCTTCTCGTAGTACTCGCGCACCTTaGTCTCCTTGGCCCGCCGCCGGGGGTTGTTCTCGA +
Preference number: 6 (lower is better)
Translates to: SQGTASRSTRAP*SPWPAAGGCSR
Trigger: TCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACTACGAGAAGCAGTTCCCTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CCA 72 bp TCATTCAGCTCCATGGAGGCCAGCTCGGCGCTCTGCTaGGGGGTGATGGCCTCCTCGCTGTTGGCCTCATTA +
Preference number: 6 (lower is better)
Translates to: SFSSMEASSALC*GVMASSLLASL
Trigger: TAATGAGGCCAACAGCGAGGAGGCCATCACCCCCCAGCAGAGCGCCGAGCTGGCCTCCATGGAGCTGAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp CCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTGGTTaGTTTTGTCAAGTGTGTTGGACCTCCTGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PVSLPLGRGRGG*FCQVCWTSWGE
Trigger: CTCTCCCCAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CCA 72 bp GATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTGTTGGACCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: DPGLAPARTRTW*LVLSSVLDLLG
Trigger: CCCCAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CCA 72 bp ACCATGGTGATCTCTCGGTCCACGCGGTCCATGTTCTaGATCAGCTCCTCCTTGGACAGCCGTGGCGGCACC +
Preference number: 6 (lower is better)
Translates to: TMVISRSTRSMF*ISSSLDSRGGT
Trigger: GGTGCCGCCACGGCTGTCCAAGGAGGAGCTGATCCAGAACATGGACCGCGTGGACCGAGAGATCACCATGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CCA 72 bp TCAGCGTCGTACAGCATGGGCGGGATCACGGCCAGCTaGCGCATCTGCTTCTCCAGGTTCTCCTGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SASYSMGGITAS*RICFSRFSCSE
Trigger: CTCAGAGCAGGAGAACCTGGAGAAGCAGATGCGCCAGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp CTTGCTGAAGAAGGCTGGCGGCTGGCTGGTGTTGCCTaGAGACTTGGAGCCCATCCTGGGCTCCGTCTGTTC +
Preference number: 6 (lower is better)
Translates to: LAEEGWRLAGVA*RLGAHPGLRLF
Trigger: GAACAGACGGAGCCCAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443451.6
CDS CCA 72 bp GATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTaGTTGGTTTTGTCAAGTGTGTTGGACCTCCTCGGG +
Preference number: 6 (lower is better)
Translates to: DPGLAPARTRTW*LVLSSVLDLLG
Trigger: CCCGAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS CCA 72 bp AGGCGCCCGGCCCTTGTGTGGGAGGGATCCAACCCCTaGTCCCAGTATTCATGCAGGTATTCACTGGGCACC +
Preference number: 6 (lower is better)
Translates to: RRPALVWEGSNP*SQYSCRYSLGT
Trigger: GGTGCCCAGTGAATACCTGCATGAATACTGGGACCAGGGGTTGGATCCCTCCCACACAAGGGCCGGGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 72 bp GTCTTGGAGCCCACCATCCGGGCGATGGCCGACCAGTaGCGGCCGTGTTCCAGGAGACCTTTCTTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: VLEPTIRAMADQ*RPCSRRPFLAV
Trigger: AACAGCCAAGAAAGGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp CTCGCTCCCGCTCGGACGAGGACGTGGTGGTTGGTTTaGTCAAGTGTGTTGGACCTCCTGGGGAGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: LAPARTRTWWLV*SSVLDLLGRVG
Trigger: CCCCACTCTCCCCAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CAA 72 bp CCCGGTCTCGCTCCCGCTCGGACGAGGACGTGGTGGTaGGTTTTGTCAAGTGTGTTGGACCTCCTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: PGLAPARTRTWW*VLSSVLDLLGR
Trigger: TCTCCCCAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CAA 90 bp ATGCGGCCTTTGCGTCTTCCCTGGCTGTTGGCAGTTTTGCGGCCTTaGGAGGCCACAGCCTCCTTCTCGTCGTTGTCCTCCCCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: MRPLRLPWLLAVLRP*EATASFSSLSSPEV
Trigger: CACCTCAGGGGAGGACAACGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGGCCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp GGTGATGGCCTCCTCGCTGTTGGCCTCATTAGCCATTaGGCGGGTGATGCGGCCTTTGCGTCTTCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: GDGLLAVGLISH*AGDAAFASSLA
Trigger: AGCCAGGGAAGACGCAAAGGCCGCATCACCCGCTCAATGGCTAATGAGGCCAACAGCGAGGAGGCCATCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp GAGGAGAGGGGATGCTCTCGGTGTCTGAGCTGTTGTTaGCAGTGGCTGGGCCACTGCATTCCCCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: EERGCSRCLSCC*QWLGHCIPLWA
Trigger: TGCCCAGAGGGGAATGCAGTGGCCCAGCCACTGTCAACAACAGCTCAGACACCGAGAGCATCCCCTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356219.7
ENST00000405201.5
ENST00000458234.5
CDS GCA 72 bp TGCGGCCTTTGCGTCTTCCCTGGCTGTTGGCAGTTTTaGGGCCTTTGGAGGCCACAGCCTCCTTCTCGTCGT +
Preference number: 6 (lower is better)
Translates to: CGLCVFPGCWQF*GLWRPQPPSRR
Trigger: ACGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp TCTTGGAGCCCACCATCCGGGCGATGGCCGACCAGTTaGGGCCGTGTTCCAGGAGACCTTTCTTGGCTGTTT +
Preference number: 6 (lower is better)
Translates to: SWSPPSGRWPTS*GRVPGDLSWLF
Trigger: AAACAGCCAAGAAAGGTCTCCTGGAACACGGCCGCAACTGGTCGGCCATCGCCCGGATGGTGGGCTCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp CCACACCCACGGGTGCCGACATGGGGCGTGAACAAGTaGACACACATGCACGTGAGCAAGGACGCATCAGCA +
Preference number: 6 (lower is better)
Translates to: PHPRVPTWGVNK*THMHVSKDASA
Trigger: TGCTGATGCGTCCTTGCTCACGTGCATGTGTGTGCACTTGTTCACGCCCCATGTCGGCACCCGTGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 72 bp TGCGTCTTCCCTGGCTGTTGGCAGTTTTGCGGCCTTTaGAGGCCACAGCCTCCTTCTCGTCGTTGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: CVFPGCWQFCGL*RPQPPSRRCPP
Trigger: GGGAGGACAACGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp CTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGTGTGTTGGACCTCCTG +
Preference number: 6 (lower is better)
Translates to: LDPGLAPARTRT*WLVLSSVLDLL
Trigger: CAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000453428.1
CDS CCA 72 bp TTGCTCTCGGTCAGCTTGCTGAAGAAGGCTGGCGGCTaGCTGGTGTTGCCTGGAGACTTGGAGCCCATCCTG +
Preference number: 6 (lower is better)
Translates to: LLSVSLLKKAGG*LVLPGDLEPIL
Trigger: CAGGATGGGCTCCAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CCA 72 bp CTCGATCCCGGTCTCGCTCCCGCTCGGACGAGGACGTaGTGGTTGGTTTTGTCAAGTGTGTTGGACCTCCTC +
Preference number: 6 (lower is better)
Translates to: LDPGLAPARTRT*WLVLSSVLDLL
Trigger: GAGGAGGTCCAACACACTTGACAAAACCAACCACCACGTCCTCGTCCGAGCGGGAGCGAGACCGGGATCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440187.5
CDS CCA 72 bp ACTGCCAGGCGCTGTGCTAGGGACTGGGAAGCAGAGTaGGGCGTTCATACCCAGCAACCACGTCAATGGGTG +
Preference number: 6 (lower is better)
Translates to: TARRCARDWEAE*GVHTQQPRQWV
Trigger: CACCCATTGACGTGGTTGCTGGGTATGAACGCCCCACTCTGCTTCCCAGTCCCTAGCACAGCGCCTGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 72 bp ATGCGGCCTTTGCGTCTTCCCTGGCTGTTGGCAGTTTaGCGGCCTTTGGAGGCCACAGCCTCCTTCTCGTCG +
Preference number: 6 (lower is better)
Translates to: MRPLRLPWLLAV*RPLEATASFSS
Trigger: CGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGGCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp GGCAGGCTGGCACTGGCATTCAGAGGGTTAAAAGCATaGGCGCTGAGCGGCGGGGACTCTTCCCACTGGTCA +
Preference number: 6 (lower is better)
Translates to: GRLALAFRGLKA*ALSGGDSSHWS
Trigger: TGACCAGTGGGAAGAGTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCTGAATGCCAGTGCCAGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000413172.1
ENST00000429285.6
ENST00000464377.1
CDS CAA 72 bp GACTTGGCTTTTCGGCTGCTGGGTCTGCCAGAGACCTaGGCCTTCCCGCCGCCACCCATGAGTGCCTTTCTA +
Preference number: 6 (lower is better)
Translates to: DLAFRLLGLPET*AFPPPPMSAFL
Trigger: TAGAAAGGCACTCATGGGTGGCGGCGGGAAGGCCAAGGTCTCTGGCAGACCCAGCAGCCGAAAAGCCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404621.5
ENST00000418829.5
CDS CAA 90 bp TTAGCCATTGAGCGGGTGATGCGGCCTTTGCGTCTTCCCTGGCTGTaGGCAGTTTTGCGGCCTTTGGAGGCCACAGCCTCCTTCTCGTCG +
Preference number: 6 (lower is better)
Translates to: LAIERVMRPLRLPWL*AVLRPLEATASFSS
Trigger: CGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAACAGCCAGGGAAGACGCAAAGGCCGCATCACCCGCTCAATGGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp GGCCTCAGTGTGAGGAGAGGGGATGCTCTCGGTGTCTaGGCTGTTGTTGACAGTGGCTTCAGCCTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: GLSVRRGDALGV*AVVDSGFSLLH
Trigger: GTGGAGGAGGCTGAAGCCACTGTCAACAACAGCTCAGACACCGAGAGCATCCCCTCTCCTCACACTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404121.6
ENST00000404621.5
ENST00000429285.6
ENST00000448614.1
CDS TCA 72 bp TCTCGATGCGCTCCACCTTCTTCTCCCAGGCCTCCATaGGCTGGTCATAGCGCTGGCAGAACTTCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: SRCAPPSSPRPP*AGHSAGRTSAP
Trigger: GGGAGCAGAAGTTCTGCCAGCGCTATGACCAGCTCATGGAGGCCTGGGAGAAGAAGGTGGAGCGCATCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS GCA 72 bp AGCTGGACCGACATTCCTTGGGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGGTGCTTGGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SWTDIPWEMAPI*LSRTLGCLAEE
Trigger: CTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000536195.1
CDS GCA 72 bp CTCCACCTGGGGCCCCAGGCCTTCCAGAATCCGATGTaGAGCTTCAGCCTTCTTCCGGTTCTCGTCGTAGAT +
Preference number: 6 (lower is better)
Translates to: LHLGPQAFQNPM*SFSLLPVLVVD
Trigger: ATCTACGACGAGAACCGGAAGAAGGCTGAAGCTGCACATCGGATTCTGGAAGGCCTGGGGCCCCAGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542927.5
CDS GCA 72 bp GAAGGGCTACCACTCACTTGGGAGATGGCACCTATTTaGCTCTCGAGGACGCTGGGGTGCTTGGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: EGLPLTWEMAPI*LSRTLGCLAEE
Trigger: CTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS CCA 72 bp GGGGCCTTGGCATGCTCTGAGTACGGGACGTGGAGCTaGACCGACATTCCTTGGGAGATGGCACCTATTTGC +
Preference number: 6 (lower is better)
Translates to: GALACSEYGTWS*TDIPWEMAPIC
Trigger: GCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAGCTCCACGTCCCGTACTCAGAGCATGCCAAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000536195.1
CDS CCA 72 bp GTCCTCCTTGGAGCACTGGGTCACAGACATGCCACCTaGAAACCACACAAAGCACTCGGTGAGGAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: VLLGALGHRHAT*KPHKALGEELG
Trigger: GCCCAGCTCCTCACCGAGTGCTTTGTGTGGTTTCCAGGTGGCATGTCTGTGACCCAGTGCTCCAAGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CAA 72 bp TTGCGGCCTTTGGAGGCCACAGCCTCCTTCTCGTCGTaGTCCTCCCCTGAGGTGTCGTCTGTCTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LRPLEATASFSS*SSPEVSSVFSL
Trigger: CAAGGAGAAGACAGACGACACCTCAGGGGAGGACAACGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp GAGCTGGACCGACATTCCTTGGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGGGTGCTTGGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: ELDRHSLGDGTY*PLEDAGVLGRG
Trigger: TCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGGAATGTCGGTCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
ENST00000536195.1
CDS CAA 72 bp TTGGACTTGACCATGGCGGAGTTGCTCTCGGTCAGCTaGCTGAAGAAGGCTGGCGGCTGGCTGGTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: LDLTMAELLSVS*LKKAGGWLVLP
Trigger: AGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 72 bp AGCAGGGGGTCAGGCAGCAGCTCTAGCCGAGGGCGCTaGCTTTCAATGAACTCCATCTCTGACTTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: SRGSGSSSSRGR*LSMNSISDFPS
Trigger: GCTGGGGAAGTCAGAGATGGAGTTCATTGAAAGCAAGCGCCCTCGGCTAGAGCTGCTGCCTGACCCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CAA 72 bp GGAAGGGCTACCACTCACTTGGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGGGTGCTTGGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: GRATTHLGDGTY*PLEDAGVLGRG
Trigger: TCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS CAA 90 bp ACCCAGAGAACGGAGTTCCAGTTCCTGGATGGAAAAGGGTTTACTTaGAGTCTTTTCCCGGTGCGGGTCCGAGGCCGAGGCAGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: TQRTEFQFLDGKGFT*SLFPVRVRGRGRWR
Trigger: GCGCCACCTGCCTCGGCCTCGGACCCGCACCGGGAAAAGACTCAAAGTAAACCCTTTTCCATCCAGGAACTGGAACTCCGTTCTCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
CDS CAA 90 bp CCCAAGAAAGGAAGGGCTACCACTCACTTGGGAGATGGCACCTATTaGCCTCTCGAGGACGCTGGGGTGCTTGGCAGAGGAGATGAGGGG +
Preference number: 6 (lower is better)
Translates to: PKKGRATTHLGDGTY*PLEDAGVLGRGDEG
Trigger: CCCCTCATCTCCTCTGCCAAGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTCCTTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS CAA 90 bp TTGGCAGTTTTGCGGCCTTTGGAGGCCACAGCCTCCTTCTCGTCGTaGTCCTCCCCTGAGGTGTCGTCTGTCTTCTCCTTGAGGAGGTCT +
Preference number: 6 (lower is better)
Translates to: LAVLRPLEATASFSS*SSPEVSSVFSLRRS
Trigger: AGACCTCCTCAAGGAGAAGACAGACGACACCTCAGGGGAGGACAACGACGAGAAGGAGGCTGTGGCCTCCAAAGGCCGCAAAACTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 90 bp TCTTGCTTCTTGGACTTGACCATGGCGGAGTTGCTCTCGGTCAGCTaGCTGAAGAAGGCTGGCGGCTGGCTGGTGTTGCCTGGAGACTTG +
Preference number: 6 (lower is better)
Translates to: SCFLDLTMAELLSVS*LKKAGGWLVLPGDL
Trigger: CAAGTCTCCAGGCAACACCAGCCAGCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 90 bp ATAGCAGCGGGCAGGCTGGCACTGGCATTCAGAGGGTTAAAAGCATaGGCGCTGAGCGGCGGGGACTCTTCCCACTGGTCATATTTACCC +
Preference number: 6 (lower is better)
Translates to: IAAGRLALAFRGLKA*ALSGGDSSHWSYLP
Trigger: GGGTAAATATGACCAGTGGGAAGAGTCCCCGCCGCTCAGCGCCAATGCTTTTAACCCTCTGAATGCCAGTGCCAGCCTGCCCGCTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000413172.1
ENST00000429285.6
ENST00000464377.1
CDS TCA 72 bp GTGCAGCTTCAGCCTTCTTCCGGTTCTCGTCGTAGATaGTCTGCACCAGGCTGCGGTGCTTCGACTCGATGG +
Preference number: 6 (lower is better)
Translates to: VQLQPSSGSRRR*SAPGCGASTRW
Trigger: CCATCGAGTCGAAGCACCGCAGCCTGGTGCAGATCATCTACGACGAGAACCGGAAGAAGGCTGAAGCTGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
ENST00000542927.5
CDS CCA 72 bp CCCCAAGAAAGGAAGGGCTACCACTCACTTGGGAGATaGCACCTATTTGCCTCTCGAGGACGCTGGGGTGCT +
Preference number: 6 (lower is better)
Translates to: PQERKGYHSLGR*HLFASRGRWGA
Trigger: AGCACCCCAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTCCTTTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS CAA 72 bp TCAATACCGTCCTCACCACCACCCAAGACCGACGTCTaGTTTGGCTCTGGAGACCTCTTGCCCCCTTCGCTG +
Preference number: 6 (lower is better)
Translates to: SIPSSPPPKTDV*FGSGDLLPPSL
Trigger: CAGCGAAGGGGGCAAGAGGTCTCCAGAGCCAAACAAGACGTCGGTCTTGGGTGGTGGTGAGGACGGTATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000443451.6
ENST00000461081.2
CDS CAA 90 bp TACACCTTCATGGGGTCGGCCATAAGCCCGTTCATGTTGATGAACTaGATGCGCTGCTGGTCAGCGTCGTACAGCATGGGCGGGATCACG +
Preference number: 6 (lower is better)
Translates to: YTFMGSAISPFMLMN*MRCWSASYSMGGIT
Trigger: CGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCCCATGAAGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp GCCATAAGCCCGTTCATGTTGATGAACTTGATGCGCTaGTGGTCAGCGTCGTACAGCATGGGCGGGATCACG +
Preference number: 6 (lower is better)
Translates to: AISPFMLMNLMR*WSASYSMGGIT
Trigger: CGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp ATAAGCCCGTTCATGTTGATGAACTTGATGCGCTGCTaGTCAGCGTCGTACAGCATGGGCGGGATCACGGCC +
Preference number: 6 (lower is better)
Translates to: ISPFMLMNLMRC*SASYSMGGITA
Trigger: GGCCGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CCA 72 bp GCTGTGGTCAGCGGTCCCAAGCTGGTAGTTGGCAGATaGCTGATGAGACCAGCCCATGACACTGAGAAACCT +
Preference number: 6 (lower is better)
Translates to: AVVSGPKLVVGR*LMRPAHDTEKP
Trigger: AGGTTTCTCAGTGTCATGGGCTGGTCTCATCAGCCATCTGCCAACTACCAGCTTGGGACCGCTGACCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 72 bp ATGGGGTCGGCCATAAGCCCGTTCATGTTGATGAACTaGATGCGCTGCTGGTCAGCGTCGTACAGCATGGGC +
Preference number: 6 (lower is better)
Translates to: MGSAISPFMLMN*MRCWSASYSMG
Trigger: GCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp TTCCCGCCGCCACCTGTTCCGGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGCTGGCTGATATTGTAT +
Preference number: 6 (lower is better)
Translates to: FPPPPVPVMAGI*KISVPGWLILY
Trigger: ATACAATATCAGCCAGCCTGGGACGGAGATCTTCAATATGCCCGCCATCACCGGAACAGGTGGCGGCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443451.6
CDS CAA 90 bp CGGTCTTTGTACACCTTCATGGGGTCGGCCATAAGCCCGTTCATGTaGATGAACTTGATGCGCTGCTGGTCAGCGTCGTACAGCATGGGC +
Preference number: 6 (lower is better)
Translates to: RSLYTFMGSAISPFM*MNLMRCWSASYSMG
Trigger: GCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCCCATGAAGGTGTACAAAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp GGAAGGTCTCCTTCTCCTGCTCACTCCACATGTTCATaGCCTGGCGGTCTTTGTACACCTTCATGGGGTCGG +
Preference number: 6 (lower is better)
Translates to: GRSPSPAHSTCS*PGGLCTPSWGR
Trigger: CCGACCCCATGAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp CTCCGCGCGTTCCTCTCCTTCTCCATCTTCAGCTTGTaGTGCTGCAAGATCTCATCGAGGTTCTGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: LRAFLSFSIFSL*CCKISSRFCLF
Trigger: GAAGAGGCAGAACCTCGATGAGATCTTGCAGCAGCACAAGCTGAAGATGGAGAAGGAGAGGAACGCGCGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000448614.1
ENST00000458234.5
CDS CCA 72 bp ACTAAGCCCCCAAGAAAGGAAGGGCTACCACTCACTTaGGAGATGGCACCTATTTGCCTCTCGAGGACGCTG +
Preference number: 6 (lower is better)
Translates to: TKPPRKEGLPLT*EMAPICLSRTL
Trigger: CAGCGTCCTCGAGAGGCAAATAGGTGCCATCTCCCAAGTGAGTGGTAGCCCTTCCTTTCTTGGGGGCTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493859.1
CDS CAA 72 bp TTGATCTCTTGCTTCTTGGACTTGACCATGGCGGAGTaGCTCTCGGTCAGCTTGCTGAAGAAGGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: LISCFLDLTMAE*LSVSLLKKAGG
Trigger: GCCGCCAGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 72 bp TCCTGCTCACTCCACATGTTCATGACCTGGCGGTCTTaGTACACCTTCATGGGGTCGGCCATAAGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: SCSLHMFMTWRS*YTFMGSAISPF
Trigger: GAACGGGCTTATGGCCGACCCCATGAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS GCA 72 bp GTTCTCGGAGCTCTCCAAGCCTCTCCCAATCGCATGTaGCTCACCAGGATGTTCTGTAAAACGATACGCAGG +
Preference number: 6 (lower is better)
Translates to: VLGALQASPNRM*LTRMFCKTIRR
Trigger: CCTGCGTATCGTTTTACAGAACATCCTGGTGAGGCACATGCGATTGGGAGAGGCTTGGAGAGCTCCGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473999.2
CDS CCA 72 bp GTCTCCTTCTCCTGCTCACTCCACATGTTCATGACCTaGCGGTCTTTGTACACCTTCATGGGGTCGGCCATA +
Preference number: 6 (lower is better)
Translates to: VSFSCSLHMFMT*RSLYTFMGSAI
Trigger: TATGGCCGACCCCATGAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGAGAAGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp TACACCTTCATGGGGTCGGCCATAAGCCCGTTCATGTaGATGAACTTGATGCGCTGCTGGTCAGCGTCGTAC +
Preference number: 6 (lower is better)
Translates to: YTFMGSAISPFM*MNLMRCWSASY
Trigger: GTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCCCATGAAGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 90 bp GTCTCCTTCTCCTGCTCACTCCACATGTTCATGACCTGGCGGTCTTaGTACACCTTCATGGGGTCGGCCATAAGCCCGTTCATGTTGATG +
Preference number: 6 (lower is better)
Translates to: VSFSCSLHMFMTWRS*YTFMGSAISPFMLM
Trigger: CATCAACATGAACGGGCTTATGGCCGACCCCATGAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGAGAAGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS TCA 72 bp TCCCTGGCAGATGAGGCTTCTTGGGGTCGGGGACTGTaGCAGATTCTTTATTTGCCCACCCACTCACGTATT +
Preference number: 6 (lower is better)
Translates to: SLADEASWGRGL*QILYLPTHSRI
Trigger: AATACGTGAGTGGGTGGGCAAATAAAGAATCTGTCACAGTCCCCGACCCCAAGAAGCCTCATCTGCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS GCA 72 bp CTTCTTGGGGTCGGGGACTGTGACAGATTCTTTATTTaGCCACCCACTCACGTATTCCCTGGTGGATCTGCT +
Preference number: 6 (lower is better)
Translates to: LLGVGDCDRFFI*PPTHVFPGGSA
Trigger: AGCAGATCCACCAGGGAATACGTGAGTGGGTGGGCAAATAAAGAATCTGTCACAGTCCCCGACCCCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 72 bp TGCTGGGTGCTATTCTTCTGTGCCAGTAAGCTCCTATaGAAAGCCCAGCAAATCAAGAAACTGCCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: CWVLFFCASKLL*KAQQIKKLPWG
Trigger: GCCCCAGGGCAGTTTCTTGATTTGCTGGGCTTTCCATAGGAGCTTACTGGCACAGAAGAATAGCACCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 72 bp TTCCTCTCCAGGAATGATGCGATCAGGCCAAAGTTCTaGGGATGCTGCATGAACTTCTCCCGGAAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: FLSRNDAIRPKF*GCCMNFSRKVS
Trigger: GGAGACCTTCCGGGAGAAGTTCATGCAGCATCCCAAGAACTTTGGCCTGATCGCATCATTCCTGGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000458234.5
CDS CAA 72 bp CTACTCCAGCCCCAGGAAGGGAAAAGCATCTGTGATTaGTCCAAACTTCCCTGGCAGATGAGGCTTCTTGGG +
Preference number: 6 (lower is better)
Translates to: LLQPQEGKSICD*SKLPWQMRLLG
Trigger: CCCAAGAAGCCTCATCTGCCAGGGAAGTTTGGACAAATCACAGATGCTTTTCCCTTCCTGGGGCTGGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 90 bp CGGTTGTGGGTGTTCAGCTTCTTGTTGATCTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTCTCGGTCAGCTTGCTGAAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: RLWVFSFLLISCFLD*TMAELLSVSLLKKA
Trigger: AGCCTTCTTCAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 90 bp TCATTCCGGTTGTGGGTGTTCAGCTTCTTGTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAGTTGCTCTCGGTCAGCTTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: SFRLWVFSFLLISCF*DLTMAELLSVSLLK
Trigger: CTTCAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 90 bp TTCAGGCTCATTCCGGTTGTGGGTGTTCAGCTTCTTGTTGATCTCTaGCTTCTTGGACTTGACCATGGCGGAGTTGCTCTCGGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: FRLIPVVGVQLLVDL*LLGLDHGGVALGQL
Trigger: AAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAATGAGCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS GCA 72 bp TTCCGGTTGTGGGTGTTCAGCTTCTTGTTGATCTCTTaGTTCTTGGACTTGACCATGGCGGAGTTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: FRLWVFSFLLIS*FLDLTMAELLS
Trigger: CGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 72 bp GTGTTCAGCTTCTTGTTGATCTCTTGCTTCTTGGACTaGACCATGGCGGAGTTGCTCTCGGTCAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VFSFLLISCFLD*TMAELLSVSLL
Trigger: CAGCAAGCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 72 bp TTGTGGGTGTTCAGCTTCTTGTTGATCTCTTGCTTCTaGGACTTGACCATGGCGGAGTTGCTCTCGGTCAGC +
Preference number: 6 (lower is better)
Translates to: LWVFSFLLISCF*DLTMAELLSVS
Trigger: GCTGACCGAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS CAA 72 bp CCTGCAGGCCCCTTACTGTATTCAGGCTCATTCCGGTaGTGGGTGTTCAGCTTCTTGTTGATCTCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: PAGPLLYSGSFR*WVFSFLLISCF
Trigger: GAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAATGAGCCTGAATACAGTAAGGGGCCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS TCA 72 bp TCTGCTCCCATTGTTTCCGAGCGTGATTCCTCCTCTTaGAGTACAAGATTAGCTTCTTCCGCATCGCCTGGT +
Preference number: 6 (lower is better)
Translates to: SAPIVSERDSSS*STRLASSASPG
Trigger: ACCAGGCGATGCGGAAGAAGCTAATCTTGTACTTCAAGAGGAGGAATCACGCTCGGAAACAATGGGAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CCA 72 bp AAAGCATTGGCGCTGAGCGGCGGGGACTCTTCCCACTaGTCATATTTACCCATGAGTGCCTTTCTAATTATG +
Preference number: 6 (lower is better)
Translates to: KALALSGGDSSH*SYLPMSAFLIM
Trigger: CATAATTAGAAAGGCACTCATGGGTAAATATGACCAGTGGGAAGAGTCCCCGCCGCTCAGCGCCAATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000405201.5
ENST00000413172.1
ENST00000429285.6
ENST00000464377.1
CDS CCA 72 bp GCAGGCCCCTTACTGTATTCAGGCTCATTCCGGTTGTaGGTGTTCAGCTTCTTGTTGATCTCTTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: AGPLLYSGSFRL*VFSFLLISCFL
Trigger: CAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAATGAGCCTGAATACAGTAAGGGGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CAA 72 bp ATTCCGGTTGTGGGTGTTCAGCTTCTTGTTGATCTCTaGCTTCTTGGACTTGACCATGGCGGAGTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: IPVVGVQLLVDL*LLGLDHGGVAL
Trigger: GAGAGCAACTCCGCCATGGTCAAGTCCAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
ENST00000461081.2
CDS TCA 72 bp CGCTGGCAGAACTTCTGCTCCCATTGTTTCCGAGCGTaGTTCCTCCTCTTGAAGTACAAGATTAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RWQNFCSHCFRA*FLLLKYKISFF
Trigger: GAAGAAGCTAATCTTGTACTTCAAGAGGAGGAATCACGCTCGGAAACAATGGGAGCAGAAGTTCTGCCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000404621.5
ENST00000405201.5
ENST00000420698.5
ENST00000429285.6
ENST00000448008.1
ENST00000458234.5
ENST00000542927.5
CDS CAA 72 bp CCAGGCTGGCTGATATTGTATTCAGGCTCATTCCGGTaGTGGGTGTTCAGCTTCTTGTTGATCTCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: PGWLILYSGSFR*WVFSFLLISCF
Trigger: GAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAATGAGCCTGAATACAATATCAGCCAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
CDS CAA 72 bp TTGTGGACTAAAACTGTTCCGGTGATGGCGGGCATATaGAAGATCTCCGTCCCAGGCTGGCTGATATTGTAT +
Preference number: 6 (lower is better)
Translates to: LWTKTVPVMAGI*KISVPGWLILY
Trigger: ATACAATATCAGCCAGCCTGGGACGGAGATCTTCAATATGCCCGCCATCACCGGAACAGTTTTAGTCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440337.3
CDS GCA 72 bp AGTATTCATGCAGGTATTCACTGGGCACCTACTATGTaGTGGGTGCTATTCTTCTGTGCCAGTAAGCTCCTA +
Preference number: 6 (lower is better)
Translates to: SIHAGIHWAPTM*WVLFFCASKLL
Trigger: TAGGAGCTTACTGGCACAGAAGAATAGCACCCAGCACATAGTAGGTGCCCAGTGAATACCTGCATGAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461081.2
CDS CCA 72 bp GGCTGGCTGATATTGTATTCAGGCTCATTCCGGTTGTaGGTGTTCAGCTTCTTGTTGATCTCTTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GWLILYSGSFRL*VFSFLLISCFL
Trigger: CAAGAAGCAAGAGATCAACAAGAAGCTGAACACCCACAACCGGAATGAGCCTGAATACAATATCAGCCAGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356219.7
ENST00000404121.6
ENST00000404621.5
ENST00000405201.5
ENST00000429285.6
ENST00000440337.3
ENST00000443451.6
CDS CAA 72 bp TTGAGTGGCAAAGACTGGAGCCTGGAAAATTTCTTCTaGTGGACTAAAACTGTTCCGGTGATGGCGGGCATA +
Preference number: 6 (lower is better)
Translates to: LSGKDWSLENFF*WTKTVPVMAGI
Trigger: TATGCCCGCCATCACCGGAACAGTTTTAGTCCACAAGAAGAAATTTTCCAGGCTCCAGTCTTTGCCACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440337.3