RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCLN (Homo sapiens)

Ensembl gene IDs: ENSG00000125912

Ensembl transcript IDs: ENST00000246117.9, ENST00000586904.1, ENST00000587740.5, ENST00000588428.5, ENST00000590671.5, ENST00000591062.1, ENST00000592235.1, ENST00000592737.5

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCAGGTCAGGCCTGCAGTCCAGGCCCCTTGCGGCAGGAGGCGGTaGGCGGAGGCCGCGCGCGATCGGGCAGGGGGTCCCGGCGTCTCC +
Preference number: 1 (lower is better)
Translates to: EQVRPAVQAPCGRRR*AEAARDRAGGPGVS
Trigger: GGAGACGCCGGGACCCCCTGCCCGATCGCGCGCGGCCTCCGCCCACCGCCTCCTGCCGCAAGGGGCCTGGACTGCAGGCCTGACCTGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp TGCATGTGTGCTTACACCAGACCGAGGGCGGCCGGCTCCCAGGACTaGGGGGCTCGTCCGCAAGTCCGTAGCCTGGCCCCGGGACGTCTC +
Preference number: 1 (lower is better)
Translates to: CMCAYTRPRAAGSQD*GARPQVRSLAPGRL
Trigger: GAGACGTCCCGGGGCCAGGCTACGGACTTGCGGACGAGCCCCCCAGTCCTGGGAGCCGGCCGCCCTCGGTCTGGTGTAAGCACACATGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp GCTCCCATGGGCCGGCCCAGGTCCTTCGGACAGCAAACACCTCCCTaGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTG +
Preference number: 1 (lower is better)
Translates to: APMGRPRSFGQQTPP*ATEGRRLRVPGQDL
Trigger: CAAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTGTCCGAAGGACCTGGGCCGGCCCATGGGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp CCGCACCCAGTTCCCCAGGGAGGACCAACTGGCCGTGGCAAAGCCTaGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCA +
Preference number: 1 (lower is better)
Translates to: PHPVPQGGPTGRGKA*MAWGPSTEPRKHQA
Trigger: TGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGGCTTTGCCACGGCCAGTTGGTCCTCCCTGGGGAACTGGGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR TCA 90 bp GCTTCACGTCCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTaGGGAAGGTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCT +
Preference number: 1 (lower is better)
Translates to: ASRPSGSGSGGAPAC*GRCCPCPPAARPAA
Trigger: AGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR GCA 90 bp TCAACACGGGCCTCCTTCTCTCCCACACACACACGACGCCTGGTCTaGGGGGTGGAGGGTTCTGTCCAAGGCTTCCCGAGGGCCCGGACC +
Preference number: 1 (lower is better)
Translates to: STRASFSPTHTRRLV*GVEGSVQGFPRART
Trigger: GGTCCGGGCCCTCGGGAAGCCTTGGACAGAACCCTCCACCCCGCAGACCAGGCGTCGTGTGTGTGTGGGAGAGAAGGAGGCCCGTGTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR GCA 90 bp CCTTCGGACAGCAAACACCTCCCTGGGCCACGGAAGGGAGACGGCTaGGGGTGCCAGGCCAGGACTTGCCCAGCTCAAGTCCCTTCCCCA +
Preference number: 1 (lower is better)
Translates to: PSDSKHLPGPRKGDG*GCQARTCPAQVPSP
Trigger: TGGGGAAGGGACTTGAGCTGGGCAAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTGTCCGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp ACCCAGTTCCCCAGGGAGGACCAACTGGCCGTGGCAAAGCCTGGATaGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGG +
Preference number: 1 (lower is better)
Translates to: TQFPREDQLAVAKPG*PGGPVPSPGNTRHW
Trigger: CCAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGGCTTTGCCACGGCCAGTTGGTCCTCCCTGGGGAACTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp GGGCCTCCTTCTCTCCCACACACACACGACGCCTGGTCTGCGGGGTaGAGGGTTCTGTCCAAGGCTTCCCGAGGGCCCGGACCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: GPPSLPHTHDAWSAG*RVLSKASRGPGPSS
Trigger: AGAGGAAGGTCCGGGCCCTCGGGAAGCCTTGGACAGAACCCTCCACCCCGCAGACCAGGCGTCGTGTGTGTGTGGGAGAGAAGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp CAGAGTCTCAGCACAAGTGCCCAGAGGCCAGTGGTGATGGGCCCTTaGGCAAGTCTCTGGAGGAGGCGGGCAACCCGCAGGGCAGACGGG +
Preference number: 1 (lower is better)
Translates to: QSLSTSAQRPVVMGP*ASLWRRRATRRADG
Trigger: CCCGTCTGCCCTGCGGGTTGCCCGCCTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGGCACTTGTGCTGAGACTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR TCA 90 bp TGCCTGGGTCCCAGAGTCTCAGCACAAGTGCCCAGAGGCCAGTGGTaGTGGGCCCTTGGGCAAGTCTCTGGAGGAGGCGGGCAACCCGCA +
Preference number: 1 (lower is better)
Translates to: CLGPRVSAQVPRGQW*WALGQVSGGGGQPA
Trigger: TGCGGGTTGCCCGCCTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGGCACTTGTGCTGAGACTCTGGGACCCAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR TCA 90 bp AGGTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGTCCAGCTGCTCCTGCTGGATCATCT +
Preference number: 1 (lower is better)
Translates to: RCCPCPPAARPAAGW*ASPSPSPAAPAGSS
Trigger: AGATGATCCAGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR GCA 90 bp CGGACCTTCCTCTCTGAGTTCCAGGAAGGGTGGCCCCAGAGGCCATaGCCCAAGTCCTCTCCTTCCCAGCAAACGTTCTCACCTGACGCC +
Preference number: 1 (lower is better)
Translates to: RTFLSEFQEGWPQRP*PKSSPSQQTFSPDA
Trigger: GGCGTCAGGTGAGAACGTTTGCTGGGAAGGAGAGGACTTGGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp GTCCAGGAAGGAAGGAAGGAAGCTCCCTCCAAAATGCTGGCCCCGTaGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCC +
Preference number: 1 (lower is better)
Translates to: VQEGRKEAPSKMLAP*HPDRSLLASMQALP
Trigger: GGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCCACGGGGCCAGCATTTTGGAGGGAGCTTCCTTCCTTCCTTCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp GACGACCTGTCCAGGAAGGAAGGAAGGAAGCTCCCTCCAAAATGCTaGCCCCGTGGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAG +
Preference number: 1 (lower is better)
Translates to: DDLSRKEGRKLPPKC*PRGTQTGACWLACK
Trigger: CTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCCACGGGGCCAGCATTTTGGAGGGAGCTTCCTTCCTTCCTTCCTGGACAGGTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 90 bp CAAGCACTCCCCAAATTCTCTCATGGTGACAAGGTGGCAGCTGCCTaGGTCCCAGAGTCTCAGCACAAGTGCCCAGAGGCCAGTGGTGAT +
Preference number: 1 (lower is better)
Translates to: QALPKFSHGDKVAAA*VPESQHKCPEASGD
Trigger: ATCACCACTGGCCTCTGGGCACTTGTGCTGAGACTCTGGGACCCAGGCAGCTGCCACCTTGTCACCATGAGAGAATTTGGGGAGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR GCA 90 bp TGTCCCCTTCTCTGTCAGGTTGTAGATGACTCGAGTCAGGGCCTCTaGAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCG +
Preference number: 1 (lower is better)
Translates to: CPLLCQVVDDSSQGL*NDPRVTGQGLRIHP
Trigger: CGGGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCTGACTCGAGTCATCTACAACCTGACAGAGAAGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR CCA 90 bp AACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTCGCAAGTCCGTAGCCTaGCCCCGGGACGTCTCCCAA +
Preference number: 2 (lower is better)
Translates to: NTSLGHGRETAAGARPGLRKSVA*PRDVSQ
Trigger: TTGGGAGACGTCCCGGGGCCAGGCTACGGACTTGCG...AAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp AACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTAAAGCCTGGATGGCCTaGGGGCCCAGTACCGAGCCC +
Preference number: 2 (lower is better)
Translates to: NTSLGHGRETAAGARPGLKAWMA*GPSTEP
Trigger: GGGCTCGGTACTGGGCCCCCAGGCCATCCAGGCTTT...AAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CAA 90 bp CCAGAGTCTCAGCACAAGTGCCCAGAGGCCAGTGGTGATGGGCCCTaGGGCAAGTCTCTGGAGGAGGCGGGCAACCCGCAGGGCAGACGG +
Preference number: 2 (lower is better)
Translates to: PESQHKCPEASGDGP*GKSLEEAGNPQGRR
Trigger: CCGTCTGCCCTGCGGGTTGCCCGCCTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGGCACTTGTGCTGAGACTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CAA 90 bp AGGAAGGTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTaGGTGAGCCAGTCCATCACCGAGTCCAGCTGCTCCTGCTGGATC +
Preference number: 2 (lower is better)
Translates to: RKVLSLSTSCAARGW*VSQSITESSCSCWI
Trigger: GATCCAGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR TCA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTCCGGACCTTCCTCTCTaGGTTCCAGGAAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSPDLPL*VPGRVA
Trigger: GGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGG...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTCACACACACGACGCCTaGTCTGCGGGGTGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSHTHDA*SAGWRV
Trigger: AACCCTCCACCCCGCAGACCAGGCGTCGTGTGTGTG...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGAGGAGACGGCTGCGGGTaGCAGGCCAGGACTTGCCCA +
Preference number: 2 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRGDGCG*QARTCP
Trigger: TGGGCAAGTCCTGGCCTGGCACCCGCAGCCGTCTCC...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTGTGTCCACTCACTCGTaGTCGGCCCCAGGGACTGTG +
Preference number: 2 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSVSTHS*SAPGTV
Trigger: CACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACAC...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp GGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCCCCCAGGGCTGGCACTaGCCTCCTCCAGGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: GTQTGACWLACKHSPNSLPQGWH*PPPGKK
Trigger: CTTCTTGCCTGGAGGAGGGCAGTGCCAGCCCTGGGG...GAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp CACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCATGCCGGCTCCCAGGACTaGGGGGCTCGTCCGCAAGTC +
Preference number: 2 (lower is better)
Translates to: HPDRSLLASMQALPKFSHAGSQD*GARPQV
Trigger: GACTTGCGGACGAGCCCCCCAGTCCTGGGAGCCGGC...ATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGAAAAGCCTGGATGGCCTaGGGGCCCAGTACCGAGCCC +
Preference number: 2 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRKAWMA*GPSTEP
Trigger: GGGCTCGGTACTGGGCCCCCAGGCCATCCAGGCTTT...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp TTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCGTGTCCACTCACTCGTaGTCGGCCCCAGGGACTGTG +
Preference number: 2 (lower is better)
Translates to: FIFSSAGCIPHQPEPQTVVSTHS*SAPGTV
Trigger: CACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACAC...GACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp GGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCTGGCCCCAGAGGCCATaGCCCAAGTCCTCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: GTQTGACWLACKHSPNSLWPQRP*PKSSPS
Trigger: GGAAGGAGAGGACTTGGGGCATGGCCTCTGGGGCCA...GAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGAAGGCTCCAGGAGGGCTaGAATCCCAGAACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRRLQEG*NPRTPG
Trigger: CCCTGGGGTTCTGGGATTCCAGCCCTCCTGGAGCCT...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp GGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCGCCTGGTCTGCGGGGTaGAGGGTTCTGTCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: GTQTGACWLACKHSPNSLAWSAG*RVLSKA
Trigger: AGCCTTGGACAGAACCCTCCACCCCGCAGACCAGGC...GAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp GACGGCCGGCTTGACTCTGTACGCATTCATCACTTGCTTCAGCTGGTCGTAGAATCCTTGTCCACCAGCTaGGCGGCCCGCGGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: DGRLDSVRIHHLLQLVVESLSTS*AARGWL
Trigger: CAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGA...TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTACAGAGTCAAGCCGGCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR CCA 90 bp TCTCCTTCCCAGCAAACGTTCTCACCTGACGCCCCCACCCCGAACACATCCTTTAGGCTCCAGGAGGGCTaGAATCCCAGAACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SPSQQTFSPDAPTPNTSFRLQEG*NPRTPG
Trigger: CCCTGGGGTTCTGGGATTCCAGCCCTCCTGGAGCCT...AAAGGATGTGTTCGGGGTGGGGGCGTCAGGTGAGAACGTTTGCTGGGAAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp GACGGCCGGCTTGACTCTGTACGCATTCATCACTTGCTTCAGCTGGTCGTAGAATGCGCGGCCCGCGGCTaGTTGGTGAGCCAGTCCATC +
Preference number: 2 (lower is better)
Translates to: DGRLDSVRIHHLLQLVVECAARG*LVSQSI
Trigger: GATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCA...TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTACAGAGTCAAGCCGGCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR GCA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTTTAATCGTGCATGTGTaGTTACACCAGACCGAGGGC +
Preference number: 2 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSLIVHV*LHQTEG
Trigger: GCCCTCGGTCTGGTGTAAGCACACATGCACGATTAA...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAAACACGACGCCTGGTCTaGGGGGTGGAGGGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKTRRLV*GVEGSV
Trigger: GACAGAACCCTCCACCCCGCAGACCAGGCGTCGTGT...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp CTTCACGTCCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTGAGGAAGGTGAGTCCAGCTGCTCCTaGTGGATCATCTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: LHVLQVAAQVVLQRAEEGESSCS*WIICSV
Trigger: CACAGAGCAGATGATCCAGCAGGAGCAGCTGGACTC...ACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTGAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR CCA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAAGGAGAAGGGGAAGGCTaGGTGATGCAGCTCCCCGAG +
Preference number: 2 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKGEGEG*VMQLPE
Trigger: CTCGGGGAGCTGCATCACCCAGCCTTCCCCTTCTCC...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CCA 90 bp CACGTAGGCCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGAACACCGGCATGTCTaGGGGTGTCCCCTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: HVGHAEVGSNANSQEQVKEHRHV*GCPLLC
Trigger: ACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTC...TTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGGCCTACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR GCA 90 bp AAGAACGGACACACCGGGGTCTCCCTGAGCTCAACACGGGCCTCCTTCTCTCCCTTAATCGTGCATGTGTaGTTACACCAGACCGAGGGC +
Preference number: 2 (lower is better)
Translates to: KNGHTGVSLSSTRASFSPLIVHV*LHQTEG
Trigger: GCCCTCGGTCTGGTGTAAGCACACATGCACGATTAA...GGGAGAGAAGGAGGCCCGTGTTGAGCTCAGGGAGACCCCGGTGTGTCCGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGAGATGACATCAGACCCTaGAGTCGGAGAAGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRDDIRP*SRRRGR
Trigger: CCTTCCCCTTCTCCGACTGCAGGGTCTGATGTCATC...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR GCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGCCTGCTGGCTAGCATaGAAGCACTCCCCAAATTCT +
Preference number: 2 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHACWLA*KHSPNS
Trigger: AGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGC...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR TCA 90 bp ATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCTCTGTCAGGTCAGGGCCTCTGCAATaGTCCTCGTGTTACGGGTCA +
Preference number: 2 (lower is better)
Translates to: IICSVNTGMSGGVPFSVRSGPLQ*SSCYGS
Trigger: TGACCCGTAACACGAGGATCATTGCAGAGGCCCTGA...CCTGACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR TCA 90 bp GACGGCCGGCTTGACTCTGTACGCATTCATCACTTGCTTCAGCTGGTCGTAGAACCCGCTTGTCAGCCTTaGCGTGGTGCTGCTTCACGT +
Preference number: 2 (lower is better)
Translates to: DGRLDSVRIHHLLQLVVEPACQP*RGAASR
Trigger: ACGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGG...TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTACAGAGTCAAGCCGGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR TCA 90 bp TCATCACTTGCTTCAGCTGGTCGTAGAAGACAAACTCTGGGTCCCGCTTGTCAGCTGTCAGGTTGTAGATaGCTCGAGTCAGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: SSLASAGRRRQTLGPACQLSGCR*LESGPL
Trigger: CAGAGGCCCTGACTCGAGTCATCTACAACCTGACAG...CTGACAAGCGGGACCCAGAGTTTGTCTTCTACGACCAGCTGAAGCAAGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR CCA 90 bp GTCAGGGCCTCTGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCTTAAAATGTGGACTTTaGGCCAGGCAAGGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: VRASAMILVLRVRVLESTLKCGL*ARQGSS
Trigger: AGAGCTACCTTGCCTGGCCCAAAGTCCACATTTTAA...GGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR CCA 72 bp GCTTACACCAGACCGAGGGCGGCCGGCTCCCAGGACTaGGGGGCTCGTCCGCAAGTCCGTAGCCTGGCCCCG +
Preference number: 3 (lower is better)
Translates to: AYTRPRAAGSQD*GARPQVRSLAP
Trigger: CGGGGCCAGGCTACGGACTTGCGGACGAGCCCCCCAGTCCTGGGAGCCGGCCGCCCTCGGTCTGGTGTAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 72 bp GGCCGGCCCAGGTCCTTCGGACAGCAAACACCTCCCTaGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: GRPRSFGQQTPP*ATEGRRLRVPG
Trigger: GCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTGTCCGAAGGACCTGGGCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR TCA 72 bp CCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGTCCAGCTGCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: PCPPAARPAAGW*ASPSPSPAAPA
Trigger: AGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR CCA 72 bp GTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTaGTTGGTGAGCCAGTCCATCACCGAGTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: VLSLSTSCAARG*LVSQSITESSC
Trigger: GCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR GCA 72 bp CAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTaGTCGGCCCCAGGGACTGTGGAGCGGCGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: QTVSQCIHHDDS*SAPGTVERRGL
Trigger: GAGCCCCCGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587740.5
3UTR CCA 72 bp TCTCTCCCACACACACACGACGCCTGGTCTGCGGGGTaGAGGGTTCTGTCCAAGGCTTCCCGAGGGCCCGGA +
Preference number: 3 (lower is better)
Translates to: SLPHTHDAWSAG*RVLSKASRGPG
Trigger: TCCGGGCCCTCGGGAAGCCTTGGACAGAACCCTCCACCCCGCAGACCAGGCGTCGTGTGTGTGTGGGAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 72 bp AGCACAAGTGCCCAGAGGCCAGTGGTGATGGGCCCTTaGGCAAGTCTCTGGAGGAGGCGGGCAACCCGCAGG +
Preference number: 3 (lower is better)
Translates to: STSAQRPVVMGP*ASLWRRRATRR
Trigger: CCTGCGGGTTGCCCGCCTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGGCACTTGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR TCA 72 bp CCCAGAGTCTCAGCACAAGTGCCCAGAGGCCAGTGGTaGTGGGCCCTTGGGCAAGTCTCTGGAGGAGGCGGG +
Preference number: 3 (lower is better)
Translates to: PRVSAQVPRGQW*WALGQVSGGGG
Trigger: CCCGCCTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGGCACTTGTGCTGAGACTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR TCA 72 bp CCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTaGGGAAGGTGCTGTCCTTGTCCACCAGCTGCGCGG +
Preference number: 3 (lower is better)
Translates to: PSGSGSGGAPAC*GRCCPCPPAAR
Trigger: CCGCGCAGCTGGTGGACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR GCA 72 bp GGGGGTCCCGGCGTCTCCTCTTTAATCGTGCATGTGTaGTTACACCAGACCGAGGGCGGCCGGCTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: GGPGVSSLIVHV*LHQTEGGRLPG
Trigger: TCCTGGGAGCCGGCCGCCCTCGGTCTGGTGTAAGCACACATGCACGATTAAAGAGGAGACGCCGGGACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR GCA 72 bp GGACAGCCACGTAGGCCATGCCGAGGTAGGCAGCAATaGCAACAGCCAGGAGCAGGTCAAAGACGGCCGGCT +
Preference number: 3 (lower is better)
Translates to: GQPRRPCRGRQQ*QQPGAGQRRPA
Trigger: AGCCGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGGCCTACGTGGCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR-3UTR CAA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGTGCCAGGCCAGGACTaGCCCAGCTCAAGTCCCTTC +
Preference number: 3 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHVPGQD*PSSSPF
Trigger: GAAGGGACTTGAGCTGGGCAAGTCCTGGCCTGGCAC...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR GCA 72 bp CTGTCCAGGAAGGAAGGAAGGAAGCTCCCTCCAAAATaGTGGCCCCGTGGCACCCAGACAGGAGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: LSRKEGRKLPPK*WPRGTQTGACW
Trigger: CCAGCAGGCTCCTGTCTGGGTGCCACGGGGCCAGCATTTTGGAGGGAGCTTCCTTCCTTCCTTCCTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR GCA 72 bp GGCTGGTTGGTGAGCCAGTCCATCACCGAGTCCAGCTaGTCCTGCTGGATCATCTGCTCTGTGAACACCGGC +
Preference number: 3 (lower is better)
Translates to: GWLVSQSITESS*SCWIICSVNTG
Trigger: GCCGGTGTTCACAGAGCAGATGATCCAGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR CCA 72 bp CCCAAATTCTCTCATGGTGACAAGGTGGCAGCTGCCTaGGTCCCAGAGTCTCAGCACAAGTGCCCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: PKFSHGDKVAAA*VPESQHKCPEA
Trigger: GGCCTCTGGGCACTTGTGCTGAGACTCTGGGACCCAGGCAGCTGCCACCTTGTCACCATGAGAGAATTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR-3UTR CAA 90 bp CACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCATAGTGGTGATGGGCCCTaGGGCAAGTCTCTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: HPDRSLLASMQALPKFSHSGDGP*GKSLEE
Trigger: CTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACT...ATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR TCA 72 bp CGTAGAAGACAAACTCTGGGTCCCGCTTGTCAGCCTTaGCGTGGTGCTGCTTCACGTCCTTCAGGTAGCGGC +
Preference number: 3 (lower is better)
Translates to: RRRQTLGPACQP*RGAASRPSGSG
Trigger: GCCGCTACCTGAAGGACGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGGACCCAGAGTTTGTCTTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR CCA 72 bp AAATGCTGGCCCCGTGGCACCCAGACAGGAGCCTGCTaGCTAGCATGCAAGCACTCCCCAAATTCTCTCATG +
Preference number: 3 (lower is better)
Translates to: KCWPRGTQTGAC*LACKHSPNSLM
Trigger: CATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCCACGGGGCCAGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR CCA 72 bp CAAGTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTaGGTAGGTTATATTGCTAAAGAACGGACACACCGG +
Preference number: 3 (lower is better)
Translates to: QVPSPPSLLGTH*VGYIAKERTHR
Trigger: CCGGTGTGTCCGTTCTTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
3UTR GCA 72 bp ATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTaGATCCCACACCAGCCTGAGCCCCAGACGGTCAGT +
Preference number: 3 (lower is better)
Translates to: IIQYGFIFSSAG*IPHQPEPQTVS
Trigger: ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
3UTR GCA 72 bp CTCTGTCAGGTTGTAGATGACTCGAGTCAGGGCCTCTaGAATGATCCTCGTGTTACGGGTCAGGGTCTTAGA +
Preference number: 3 (lower is better)
Translates to: LCQVVDDSSQGL*NDPRVTGQGLR
Trigger: TCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCTGACTCGAGTCATCTACAACCTGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGCCGGACGACGTCCTaGGGCACGGCGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDCRTTS*GTAAMA
Trigger: GGCCATGGCCGCCGTGCCCCAGGACGTCGTCCGGCA...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR TCA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCCCAGGTGGGACAGCGTaGAGGCGGGCAGTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCPGGTA*RRAVGG
Trigger: TCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGG...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCCCGCACTCGCCCTaGGGTCCTGTGGGCACCGCG +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWSPHSP*GPVGTA
Trigger: CGCGGTGCCCACAGGACCTCAGGGCGAGTGCGGGCT...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR GCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGAGCAGGTGCAGGCTGCTaGCCCGGCCCACGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGAGAGC*PGPRCP
Trigger: TGGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGC...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACCGTGCAGGTGCAGGCTaGTGCCCCGGCCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDRAGAG*CPGPRC
Trigger: ACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACG...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACGTGCAGGTGCAGGCTaGTGCCCCGGCCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGRAGAG*CPGPRC
Trigger: ACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACG...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGCGGGCAGTCGGCGGATaGCGAAGCGCTCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQRAVGG*RSARAP
Trigger: GGGAGCACGAGCGCTTCGCCATCCGCCGACTGCCCG...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCCGGGCAGTCGGCGGATaGCGAAGCGCTCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCRAVGG*RSARAP
Trigger: GGGAGCACGAGCGCTTCGCCATCCGCCGACTGCCCG...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGCCCTGAGGTCCTGTaGGCACCGCGGCGAACCGCC +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRARPEVL*APRRTA
Trigger: GGCGGTTCGCCGCGGTGCCCACAGGACCTCAGGGCG...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR TCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCAGGTGGGACAGCGTaGAGGCGGGCAGTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGPGGTA*RRAVGG
Trigger: TCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGG...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACCTCCGCCGCCATCGTaGGCGCCTCCGTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGPPPPS*APPCSA
Trigger: TGCTGAACACGGAGGCGCGCACGATGGCGGCGGAGG...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp TGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCACGGCGCCCGCCGACTaGCGCAGGGCCTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: CPCRAARGGAVSTHSCSATAPAD*RRAFWY
Trigger: GTACCAGAAGGCCCTGCGGCAGTCGGCGGGCGCCGT...GGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACGGCGGCTTGGACACGTaGAGGTGCAGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDGGLDT*RCRLLP
Trigger: GGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCC...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGAGGCGGCTTGGACACGTaGAGGTGCAGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGGGLDT*RCRLLP
Trigger: GGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCC...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGAGGCGTGCTGCAGGGTaGCCTCCCGAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSRRAAG*PPEAAW
Trigger: CCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCT...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGCGCAGGAAGGCGTGCTaGAGGGTGCCCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWRRKAC*RVPSRG
Trigger: GCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCG...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCGCAGGAAGGCGTGCTaGAGGGTGCCCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PVPAGPPAAGQCPLTRARRRKAC*RVPSRG
Trigger: GCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCG...CCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGATCCTTGTCCACCAGCTaGGCGGCCCGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGSLSTS*AARGWL
Trigger: CAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGA...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTCCTTGTCCACCAGCTaGGCGGCCCGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDSLSTS*AARGWL
Trigger: CAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGA...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACGGAGACGGCTGCGGGTaGCAGGCCAGGACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDGDGCG*QARTCP
Trigger: TGGGCAAGTCCTGGCCTGGCACCCGCAGCCGTCTCC...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGCGCTGGCCGTCACGGTaGCTCTCCAGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQRWPSR*LSRWDS
Trigger: GCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCG...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGTGCGCGGCCCGCGGCTaGTTGGTGAGCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQCAARG*LVSQSI
Trigger: GATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCA...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCGGCTCCCAGGACTaGGGGGCTCGTCCGCAAGTC +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSAGSQD*GARPQV
Trigger: GACTTGCGGACGAGCCCCCCAGTCCTGGGAGCCGGC...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGCCGTGTGCCTCGGCATaGGTAGCCGCCGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSPCASA*VAAGVL
Trigger: CAGGACCCCGGCGGCTACCCATGCCGAGGCACACGG...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR TCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGAACACCGGGGTCTCCCTaGGCTCAACACGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGTPGSP*AQHGPP
Trigger: AGGAGGCCCGTGTTGAGCTCAGGGAGACCCCGGTGT...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAACACCGGGGTCTCCCTaGGCTCAACACGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PCRAARGGAVSTHSCSAPTPGSP*AQHGPP
Trigger: AGGAGGCCCGTGTTGAGCTCAGGGAGACCCCGGTGT...TGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGACGGCGCCCGCCGACTaGCGCAGGGCCTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAATAPAD*RRAFWY
Trigger: GTACCAGAAGGCCCTGCGGCAGTCGGCGGGCGCCGT...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCCCCGGGCCACCTCCTaGCTCCCAGTACTCCACCCG +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVEPRATS*LPVLHP
Trigger: CGGGTGGAGTACTGGGAGGCAGGAGGTGGCCCGGGG...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCAGACGCCGCTCCCGTTaGAGTCCGCGCCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGRRRSR*SPRPAT
Trigger: TGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCT...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGCCTCCCGAGGCGGCTTaGACACGTGCAGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSPPEAA*TRAGAG
Trigger: GCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGG...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCGGTGGCTCTCCAGGTaGGACAGCGTGAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PVPAGPPAAGQCPLTRARRWLSR*DSVKAG
Trigger: GCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCG...CCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCTGCGCGGCCCGCGGCTaGTTGGTGAGCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGCAARG*LVSQSI
Trigger: GATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCA...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACCGCAAGTCCGTAGCCTaGCCCCGGGACGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDRKSVA*PRDVSQ
Trigger: TTGGGAGACGTCCCGGGGCCAGGCTACGGACTTGCG...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGAGTCCAGTAGCCGCATaGGCACGCAGCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSSPVAA*ARSGGS
Trigger: TGAGCCGCCGCTGCGTGCTCATGCGGCTACTGGACT...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR TCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCAGTCCAGTAGCCGCATaGGCACGCAGCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGSPVAA*ARSGGS
Trigger: TGAGCCGCCGCTGCGTGCTCATGCGGCTACTGGACT...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR TCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGCGTCCTCCGCCAGGTTaGTCCGCTTGTGCACCATGG +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQRPPPG*SACAPW
Trigger: CCATGGTGCACAAGCGGATCAACCTGGCGGAGGACG...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGT +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSPAAGW*ASPSPS
Trigger: ACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGG...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGT +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAPAAGW*ASPSPS
Trigger: ACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGG...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCATGGCGAAGCGCTCGTaGTCCCAGGCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGMAKRS*SQASTS
Trigger: GGACGTGCTGGCCTGGGAGCACGAGCGCTTCGCCAT...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGTCCTTGTCCACCAGCTaGGCGGCCCGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVESLSTS*AARGWL
Trigger: CAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGA...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGCCCCAGGGCTGGCACTaGCCTCCTCCAGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWPQGWH*PPPGKK
Trigger: CTTCTTGCCTGGAGGAGGGCAGTGCCAGCCCTGGGG...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGCCCCGCCAGCCGCGCTaGCTGTCGGGAATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWPRQPR*LSGIVV
Trigger: GACTACAATTCCCGACAGGCAGCGCGGCTGGCGGGG...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTGGACGGCGGTCTCCATaGCCAGCATCTCCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAGRRSP*PASPAR
Trigger: TCGAGCCGGAGATGCTGGCCATGGAGACCGCCGTCC...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGCCATCTGGAAGCCGTTaGCAGTGGCCGTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLPSGSR*QWPCAA
Trigger: TGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGG...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGCCGCTGGTGACCATCTaGAAGCCGTTGGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQPLVTI*KPLAVA
Trigger: GGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGG...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGCCGCCCCTCCACGCTaGCAATCAGCCAGTCACTCA +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQAAPPR*QSASHS
Trigger: TGAGTGACTGGCTGATTGCCAGCGTGGAGGGGCGGC...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGAGACGCCGCTCCCGTTaGAGTCCGCGCCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAARRRSR*SPRPAT
Trigger: TGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCT...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCCTCCCGAGGCGGCTTaGACACGTGCAGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVEPPEAA*TRAGAG
Trigger: GCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGG...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGTACCTCAGGGAACTaGTGCGCGGCCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRARTSGN*CAATVS
Trigger: GGAGACGGTGGCCGCGCACCAGTTCCCTGAGGTACG...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGAATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGMMLLR*PSRWLS
Trigger: GGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCAT...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCGGAGGGCAGAGGTGCTaGCCGAAGAACTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCGGQRC*PKNWWP
Trigger: TGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCC...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCGTCCTCCGCCAGGTTaGTCCGCTTGTGCACCATGG +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGRPPPG*SACAPW
Trigger: CCATGGTGCACAAGCGGATCAACCTGGCGGAGGACG...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACGGTGCTCCAGCGTGCTaGGGAAGGTGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDGAPAC*GRCCPC
Trigger: ACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACC...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGGGTGCTCCAGCGTGCTaGGGAAGGTGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLGAPAC*GRCCPC
Trigger: ACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACC...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGCCCGCTTGTCAGCCTTaGCGTGGTGCTGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLPACQP*RGAASR
Trigger: ACGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGG...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGCCCGCTTGTCAGCCTTaGCGTGGTGCTGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQPACQP*RGAASR
Trigger: ACGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGG...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTGGTGGGGACAGGACGTaGCCTTGCGACCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAGGDRT*PCDLEG
Trigger: TCCTTCCAGGTCGCAAGGTCACGTCCTGTCCCCACC...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR GCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTGCACTGCATTCCGTGTaGCGTAGGGCTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAALHSV*RRAGPA
Trigger: TGCAGGGCCAGCCCTACGGCACACGGAATGCAGTGC...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR GCA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCCGTTGGCAGTGGCCGTaGGCAGCAGTACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCRWQWP*AAVLQQ
Trigger: CTGCTGAAGTACTGCTGCGCACGGCCACTGCCAACG...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGATGGCGAAGCGCTCGTaGTCCCAGGCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVEMAKRS*SQASTS
Trigger: GGACGTGCTGGCCTGGGAGCACGAGCGCTTCGCCAT...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGTGTCCACTCACTCGTaGTCGGCCCCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSVSTHS*SAPGTV
Trigger: CACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACAC...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGGTGTCCACTCACTCGTaGTCGGCCCCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWVSTHS*SAPGTV
Trigger: CACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACAC...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGTGGCCCCAGAGGCCATaGCCCAAGTCCTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWWPQRP*PKSSPS
Trigger: GGAAGGAGAGGACTTGGGGCATGGCCTCTGGGGCCA...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCACACGACGCCTGGTCTaGGGGGTGGAGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CPCRAARGGAVSTHSCSATRRLV*GVEGSV
Trigger: GACAGAACCCTCCACCCCGCAGACCAGGCGTCGTGT...GGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGCCAGGCCAGGACTTaGCCAGCTCAAGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDCQART*PAQVPS
Trigger: GGAAGGGACTTGAGCTGGGCAAGTCCTGGCCTGGCA...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGGCTGAGCCTGGGCACTaGTCACCTGGACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWAEPGH*SPGQPR
Trigger: ACGTGGCTGTCCAGGTGAGCAGTGCCCAGGCTCAGC...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592235.1
CDS-3UTR CCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGGGACGGCGGTCTCCATaGCCAGCATCTCCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAAGRRSP*PASPAR
Trigger: TCGAGCCGGAGATGCTGGCCATGGAGACCGCCGTCC...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp CCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGAAGCCGTTGGCAGTaGCCGTGCGCAGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: PCRAARGGAVSTHSCSAPGSRWQ*PCAAVL
Trigger: AAGTACTGCTGCGCACGGCCACTGCCAACGGCTTCC...TGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCAGGCTCCAGGAGGGCTaGAATCCCAGAACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGRLQEG*NPRTPG
Trigger: CCCTGGGGTTCTGGGATTCCAGCCCTCCTGGAGCCT...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGGAGAAGGGGAAGGCTaGGTGATGCAGCTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSGEGEG*VMQLPE
Trigger: CTCGGGGAGCTGCATCACCCAGCCTTCCCCTTCTCC...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGAAAGCCTGGATGGCCTaGGGGCCCAGTACCGAGCCC +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAAKAWMA*GPSTEP
Trigger: GGGCTCGGTACTGGGCCCCCAGGCCATCCAGGCTTT...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCACCAGGGAGGACCAACTaGCCGTGGCAAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PCRAARGGAVSTHSCSAPPGRTN*PWQSLD
Trigger: ATCCAGGCTTTGCCACGGCCAGTTGGTCCTCCCTGG...TGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACGGTCCCCTGCCAACCTaGAGGAAAGAGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDGPLPT*RKEGWL
Trigger: CAACCACCCCTCTTTCCTCCAGGTTGGCAGGGGACC...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGGTTGTAGGCCCACTCTaGAACTCCCGGAAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLVVGPL*NSRKVR
Trigger: CCGCACCTTCCGGGAGTTCCAGAGTGGGCCTACAAC...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR TCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGCGTAGTGGGCCACGATaGCGATGGTGGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWRSGPR*RWWEGP
Trigger: AGGACCTTCCCACCATCGTCATCGTGGCCCACTACG...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR TCA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCTGCATCTGCTCTGTaGACACCGGCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCSASAL*TPACLG
Trigger: CCCCAGACATGCCGGTGTTCACAGAGCAGATGCAGA...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR TCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGATCTGCATCTGCTCTGTaGACACCGGCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGSASAL*TPACLG
Trigger: CCCCAGACATGCCGGTGTTCACAGAGCAGATGCAGA...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTTGTAGGCGGCGTGCGTaGGCTTGTAGGTGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRACRRRA*ACRCRA
Trigger: GGCTCTACACCTACAAGCGCACGCACGCCGCCTACA...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp TCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTGAGCCAGTCCATCACCAGGCGTGCTGCAGGGTaGCCTCCCGAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLSTSCAARGWLVSQSITRRAAG*PPEAAW
Trigger: CCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCT...GGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp GCCCGGACCTTCCTCTCTGAGTTCCAGGAAGGGTGGCCCCAGAGGCCATGCCCCAGGCGTGCTGCAGGGTaGCCTCCCGAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ARTFLSEFQEGWPQRPCPRRAAG*PPEAAW
Trigger: CCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCT...GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGGCTCGGGAGGCAGGGGCCCTaGCAGGCCCCCACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: PGWPGGPVPSPGNTRHWLGRQGP*QAPTKQ
Trigger: TTGCTTCGTGGGGGCCTGGCAGGGCCCCTGCCTCCC...GAGCCAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCTCACCCCTCCAGGCTaGAGGTTCTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVELTPPG*RFWRAE
Trigger: CTCTGCCCTCCAGAACCTGCAGCCTGGAGGGGTGAG...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GCGGCCCGCGGCTGGTTGGTGAGCCAGTCCATCACCGAGTCCAGCTGCTCCTGCCGGTGGCTCTCCAGGTaGGACAGCGTGAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: AARGWLVSQSITESSCSCRWLSR*DSVKAG
Trigger: GCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCG...GCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGGAACACCGGCATGTCTaGGGGTGTCCCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLEHRHV*GCPLLC
Trigger: ACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTC...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGGCCTGGTCTGCGGGGTaGAGGGTTCTGTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVEAWSAG*RVLSKA
Trigger: AGCCTTGGACAGAACCCTCCACCCCGCAGACCAGGC...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACCAGACAGGAGCCTGCTaGCTAGCATGCAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDQTGAC*LACKHS
Trigger: GGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTG...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTGTGAGGGGCGAAAGGTaGGGACAGGACGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAVRGER*GQDVTL
Trigger: CAAGGTCACGTCCTGTCCCCACCTTTCGCCCCTCAC...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR TCA 90 bp CATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGGGGGCTCCGGCGTCCTCCGCCAGGTTaGTCCGCTTGTGCACCATGG +
Preference number: 4 (lower is better)
Translates to: HHDDSCSAPGTVERRGLRRPPPG*SACAPW
Trigger: CCATGGTGCACAAGCGGATCAACCTGGCGGAGGACG...CCGGAGCCCCCGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGTCAGGGCCTCTGCAATaGTCCTCGTGTTACGGGTCA +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQSGPLQ*SSCYGS
Trigger: TGACCCGTAACACGAGGATCATTGCAGAGGCCCTGA...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CAGCAAACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGAAGGGGAAGGCTGGGTaGTGCAGCTCCCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QQTPPWATEGRRLRVPGQKGKAG*CSSPSP
Trigger: TGGGCTCGGGGAGCTGCATCACCCAGCCTTCCCCTT...CTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGTCTTGTAGAGGAGGCTaGAGTGCTGAGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSSCRGG*SAEPGH
Trigger: GTGCCCAGGCTCAGCACTTCAGCCTCCTCTACAAGA...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592235.1
CDS-3UTR GCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGTGTAGGCGGCGTGCGTaGGCTTGTAGGTGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVECRRRA*ACRCRA
Trigger: GGCTCTACACCTACAAGCGCACGCACGCCGCCTACA...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGAGAGTCCAGCTGCTCCTaGTGGATCTGCATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGESSCS*WICICS
Trigger: AGAGCAGATGCAGATCCAGCAGGAGCAGCTGGACTC...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp CCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCGAGGTAGGCAGCAATaGCAACAGCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PVPAGPPAAGQCPLTRARRGRQQ*QQPGAG
Trigger: ACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCG...CCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR GCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCGAGGTAGGCAGCAATaGCAACAGCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGRGRQQ*QQPGAG
Trigger: ACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCG...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR GCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGCGAGGTAGGCAGCAATaGCAACAGCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSRGRQQ*QQPGAG
Trigger: ACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCG...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR GCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGCAGCCACGTAGGCCATaGCGAGGTAGGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAAQPRRP*RGRQQC
Trigger: GCATTGCTGCCTACCTCGGCATGGCCTACGTGGCTG...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR GCA 90 bp GCCCGGACCTTCCTCTCTGAGTTCCAGGAAGGGTGGCCCCAGAGGCCATGCCCCCGGAAGGGAGACGGCTaGGGGTGCCAGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ARTFLSEFQEGWPQRPCPRKGDG*GCQART
Trigger: AGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCG...GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGACCCAGACAGGAGCCTaGTGGCTAGCATGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWTQTGA*WLACKH
Trigger: GTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGT...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGTTCTCATCGGCCGGCTaGATCCCACACCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAAFSSAG*IPHQPE
Trigger: CTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAA...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGCTCCGTGTTCAGCACTaGATTCCGTGTGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWLRVQH*IPCASA
Trigger: TGCCGAGGCACACGGAATGCAGTGCTGAACACGGAG...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR CCA 90 bp AAAGCCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGGCAGAGGCGGAGCCCTaGGAGGCGGAGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KAWMAWGPSTEPRKHQALAEAEP*EAEAAW
Trigger: CCAGGCTGCCTCCGCCTCCCAGGGCTCCGCCTCTGC...CAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGGCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR CCA 90 bp AACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTCCTCCCGAGGCGGCTTaGACACGTGCAGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: NTSLGHGRETAAGARPGLPPEAA*TRAGAG
Trigger: GCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGG...AAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTGAGCCAGTCCCGTACCTCAGGGAACTaGTGCGCGGCCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: VLSLSTSCAARGWLVSQSRTSGN*CAATVS
Trigger: GGAGACGGTGGCCGCGCACCAGTTCCCTGAGGTACG...GGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp GCCCGGACCTTCCTCTCTGAGTTCCAGGAAGGGTGGCCCCAGAGGCCATGCCCCCGCTGGCCGTCACGGTaGCTCTCCAGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ARTFLSEFQEGWPQRPCPRWPSR*LSRWDS
Trigger: GCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCG...GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTCCAGCTGCTCCTGCTaGATCTGCATCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLSSCSC*ICICSV
Trigger: CACAGAGCAGATGCAGATCCAGCAGGAGCAGCTGGA...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGAGGACCAACTGGCCGTaGCAAAGCCTGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVERTNWP*QSLDGL
Trigger: CAGGCCATCCAGGCTTTGCCACGGCCAGTTGGTCCT...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGGGTCCCCTGCCAACCTaGAGGAAAGAGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVEGPLPT*RKEGWL
Trigger: CAACCACCCCTCTTTCCTCCAGGTTGGCAGGGGACC...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp TGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCTCAGGGCCTCTGCAATaGTCCTCGTGTTACGGGTCA +
Preference number: 4 (lower is better)
Translates to: CPCRAARGGAVSTHSCSASGPLQ*SSCYGS
Trigger: TGACCCGTAACACGAGGATCATTGCAGAGGCCCTGA...GGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCTGTCAGGTTGTAGATaGCTCGAGTCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGLSGCR*LESGPL
Trigger: CAGAGGCCCTGACTCGAGTCATCTACAACCTGACAG...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCCAAAGACGGCCGGCTTaGCTCTGTACGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCQRRPA*LCTHSS
Trigger: TGATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTG...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR TCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGTCTTGTAGAGGAGGCTaGAGTGCTGGACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWSCRGG*SAGQPR
Trigger: ACGTGGCTGTCCAGCACTTCAGCCTCCTCTACAAGA...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGAACTGGTGGCCAAAGTaGGACCCCCTGGTCCTATCT +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSNWWPK*DPLVLS
Trigger: AGATAGGACCAGGGGGTCTCACTTTGGCCACCAGTT...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCGGCGGCTTGGACACGTaGAGGTGCAGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSAGCIPHQPEPQTVSQCGGLDT*RCRLLP
Trigger: GGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCC...GCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGAGGTTGATCCGCTTGTaGACCATGGAGAACCGTACC +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLRLIRL*TMENRT
Trigger: GGTACGGTTCTCCATGGTGCACAAGCGGATCAACCT...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCATGCTGGATCTGCATCTaGTCTGTGAACACCGGCATG +
Preference number: 4 (lower is better)
Translates to: PCRAARGGAVSTHSCSAPCWICI*SVNTGM
Trigger: CATGCCGGTGTTCACAGAGCAGATGCAGATCCAGCA...TGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTGAGTCCAGCTGCTCCTaGTGGATCTGCATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAESSCS*WICICS
Trigger: AGAGCAGATGCAGATCCAGCAGGAGCAGCTGGACTC...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTATCACCGAGTCCAGCTaGTCCTGCTGGATCTGCATC +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAITESS*SCWICI
Trigger: GATGCAGATCCAGCAGGAGCAGCTGGACTCGGTGAT...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR GCA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCGCCTGCTGGCTAGCATaGAAGCACTCCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCACWLA*KHSPNS
Trigger: AGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGC...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTAGGCTGGAGTCTGTGTaGTCCAGGTTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRARLESV*SRLSSS
Trigger: GCTGGAAGACAACCTGGACCACACAGACTCCAGCCT...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGTGTCCTGAAGCAGGCTaGAGTCTGTGTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVPAGPPAAGQCPLTRARCPEAG*SLCGPG
Trigger: ACCTGGACCACACAGACTCCAGCCTGCTTCAGGACA...CCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCGGACCTTCCTCTCTGAGTTCCAGGAAGGGTGGCCCCAGAGGCCATGCCCCCGTACCTCAGGGAACTaGTGCGCGGCCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: ARTFLSEFQEGWPQRPCPRTSGN*CAATVS
Trigger: GGAGACGGTGGCCGCGCACCAGTTCCCTGAGGTACG...GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTTCCGCTTGTGCACCATaGAGAACCGTACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRASACAP*RTVPQG
Trigger: TCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGA...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTTCCAGCTGCTCCTGCTaGATCTGCATCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRASSCSC*ICICSV
Trigger: CACAGAGCAGATGCAGATCCAGCAGGAGCAGCTGGA...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp TCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCTGCGCGGCCCGCGGCTaGTTGGTGAGCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: SAGCIPHQPEPQTVSQCICAARG*LVSQSI
Trigger: GATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCA...GATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCATTGTCAGCCTTGACGTaGTGCTGCTTCACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PCRAARGGAVSTHSCSAPLSALT*CCFTSF
Trigger: GAAGGACGTGAAGCAGCACCACGTCAAGGCTGACAA...TGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGTTGTCAGCCTTGACGTaGTGCTGCTTCACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQLSALT*CCFTSF
Trigger: GAAGGACGTGAAGCAGCACCACGTCAAGGCTGACAA...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GAGGCCGCGCGCGATCGGGCAGGGGGTCCCGGCGTCTCCTCTTTAATCGTGCATCGCAAGTCCGTAGCCTaGCCCCGGGACGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: EAARDRAGGPGVSSLIVHRKSVA*PRDVSQ
Trigger: TTGGGAGACGTCCCGGGGCCAGGCTACGGACTTGCG...ATGCACGATTAAAGAGGAGACGCCGGGACCCCCTGCCCGATCGCGCGCGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGCAAAGTGAGACCCCCTaGTCCTATCTGGACAGAACC +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQQSETP*SYLDRT
Trigger: GGTTCTGTCCAGATAGGACCAGGGGGTCTCACTTTG...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTCCAGCTGCTCCTGCTaGATCATCTGCTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLSSCSC*IICSVN
Trigger: GTTCACAGAGCAGATGATCCAGCAGGAGCAGCTGGA...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592737.5
3UTR CAA 72 bp CTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTaGGTGAGCCAGTCCATCACCGAGTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLSTSCAARGW*VSQSITESSCS
Trigger: GGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR CAA 72 bp AGGTGGTGCTCCAGCGTGCTGAGGAAGGTGCTGTCCTaGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RWCSSVLRKVLS*STSCAARGWLV
Trigger: CACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp GAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCACCAGGTGGGACAGCGTaGAGGCGGGCAGTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: EPQTVSQCIHHDDSCSAPPGGTA*RRAVGG
Trigger: TCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGG...TGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGCAAAGACGGCCGGCTTaGCTCTGTACGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSQRRPA*LCTHSS
Trigger: TGATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTG...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR TCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGCAAAGACGGCCGGCTTaGCTCTGTACGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWQRRPA*LCTHSS
Trigger: TGATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTG...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR TCA 90 bp CGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCCCGGACCTTCCTCTCTaGGTTCCAGGAAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RPAASHTSLSPRRSVSASPDLPL*VPGRVA
Trigger: GGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGG...GGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCAAATTCTCTCATGGTaGCAAGGTGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PVPAGPPAAGQCPLTRARQILSW*QGGSCL
Trigger: CAGGCAGCTGCCACCTTGTCACCATGAGAGAATTTG...CCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCACGTGCAGGTGCAGGCTaGTGCCCCGGCCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: EPQTVSQCIHHDDSCSAPRAGAG*CPGPRC
Trigger: ACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACG...TGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR GCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTAGGCGTGCTGCAGGGTaGCCTCCCGAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPRRAAG*PPEAAW
Trigger: CCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCT...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGACGGCCGCGCAGGAAGGCGTGCTaGAGGGTGCCCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PCRGRQQCQQPGAGQRRPRRKAC*RVPSRG
Trigger: GCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCG...CGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGGTTGATCCGCTTGTaGACCATGGAGAACCGTACC +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWRLIRL*TMENRT
Trigger: GGTACGGTTCTCCATGGTGCACAAGCGGATCAACCT...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGTCGAGTCAGGGCCTCTaGAATGATCCTCGTGTTACG +
Preference number: 4 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWSSQGL*NDPRVT
Trigger: CGTAACACGAGGATCATTGCAGAGGCCCTGACTCGA...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGTCAGCCTTGACGTGGTaGTGCTTCACGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVESALTW*CFTSFR
Trigger: CCTGAAGGACGTGAAGCAGCACCACGTCAAGGCTGA...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CAGCAAACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGCAGCCACGTAGGCCATaGCGAGGTAGGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: QQTPPWATEGRRLRVPGQQPRRP*RGRQQC
Trigger: GCATTGCTGCCTACCTCGGCATGGCCTACGTGGCTG...CTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTGAGCCAGTCCCAGCCACGTAGGCCATaGCGAGGTAGGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: VLSLSTSCAARGWLVSQSQPRRP*RGRQQC
Trigger: GCATTGCTGCCTACCTCGGCATGGCCTACGTGGCTG...GGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGTTAATCGTGCATGTGTaGTTACACCAGACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQLIVHV*LHQTEG
Trigger: GCCCTCGGTCTGGTGTAAGCACACATGCACGATTAA...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTGGGAGGCAGGGGCCCTaGCAGGCCCCCACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPGRQGP*QAPTKQ
Trigger: TTGCTTCGTGGGGGCCTGGCAGGGCCCCTGCCTCCC...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCAGACGGTCAGTCAGTaGATCCATCATGACGACCTG +
Preference number: 4 (lower is better)
Translates to: CPCRAARGGAVSTHSCSAQTVSQ*IHHDDL
Trigger: CAGGTCGTCATGATGGATGCACTGACTGACCGTCTG...GGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGTCCGCTTGTGCACCATaGAGAACCGTACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAASACAP*RTVPQG
Trigger: TCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGA...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGTCCGCTTGTGCACCATaGAGAACCGTACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVESACAP*RTVPQG
Trigger: TCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGA...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTCGGGCAGTCGGCGGATaGCGAAGCGCTCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPRAVGG*RSARAP
Trigger: GGGAGCACGAGCGCTTCGCCATCCGCCGACTGCCCG...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTGCCGGCTCCCAGGACTaGGGGGCTCGTCCGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPAGSQD*GARPQV
Trigger: GACTTGCGGACGAGCCCCCCAGTCCTGGGAGCCGGC...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp AACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTAGGCTCCAGGAGGGCTaGAATCCCAGAACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NTSLGHGRETAAGARPGLRLQEG*NPRTPG
Trigger: CCCTGGGGTTCTGGGATTCCAGCCCTCCTGGAGCCT...AAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCGAGTTCCAGGAAGGGTaGCCCCAGAGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: SAGCIPHQPEPQTVSQCIEFQEG*PQRPCP
Trigger: GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTC...GATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGGCTCGCCTGGTCTGCGGGGTaGAGGGTTCTGTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PGWPGGPVPSPGNTRHWLAWSAG*RVLSKA
Trigger: AGCCTTGGACAGAACCCTCCACCCCGCAGACCAGGC...GAGCCAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGGCTCCACACACACGACGCCTaGTCTGCGGGGTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PGWPGGPVPSPGNTRHWLHTHDA*SAGWRV
Trigger: AACCCTCCACCCCGCAGACCAGGCGTCGTGTGTGTG...GAGCCAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGCGTGACCTTGCGACCTaGAAGGAAGTTGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLRDLAT*KEVGDK
Trigger: TTTATCCCCAACTTCCTTCCAGGTCGCAAGGTCACG...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590671.5
3UTR CAA 72 bp CAGCACAAGTGCCCAGAGGCCAGTGGTGATGGGCCCTaGGGCAAGTCTCTGGAGGAGGCGGGCAACCCGCAG +
Preference number: 4 (lower is better)
Translates to: QHKCPEASGDGP*GKSLEEAGNPQ
Trigger: CTGCGGGTTGCCCGCCTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGGCACTTGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp ATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGGGGGCTCCGTAGTGGGCCACGATaGCGATGGTGGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: IHHDDSCSAPGTVERRGLRSGPR*RWWEGP
Trigger: AGGACCTTCCCACCATCGTCATCGTGGCCCACTACG...GAGCCCCCGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp CTTCACGTCCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTGAGGAAGGTCCAGGTGGGACAGCGTaGAGGCGGGCAGTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: LHVLQVAAQVVLQRAEEGPGGTA*RRAVGG
Trigger: TCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGG...ACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTGGGACCGCACGTCCATaGTGCTGCTGCGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPGTARP*CCCAGR
Trigger: ACGGCCAGCGCAGCAGCATCATGGACGTGCGGTCCC...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp AAAGCCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGT +
Preference number: 4 (lower is better)
Translates to: KAWMAWGPSTEPRKHQALPAAGW*ASPSPS
Trigger: ACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGG...CAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGGCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GCCCGGACCTTCCTCTCTGAGTTCCAGGAAGGGTGGCCCCAGAGGCCATGCCCCCCCTGCAGGTCGTACTaGTGCATGCGGTACACGGTG +
Preference number: 4 (lower is better)
Translates to: ARTFLSEFQEGWPQRPCPPCRSY*CMRYTV
Trigger: CACCGTGTACCGCATGCAGCAGTACGACCTGCAGGG...GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGGGC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR GCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGCAGGTGCAGGCTGCTaGCCCGGCCCACGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHAGAGC*PGPRCP
Trigger: TGGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGC...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACCCCCTGGTCCTATCGTGCAGGTGCAGGCTaGTGCCCCGGCCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: GRGAGRRTGGQSETPWSYRAGAG*CPGPRC
Trigger: ACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACG...ATAGGACCAGGGGGTCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GAGGCCGCGCGCGATCGGGCAGGGGGTCCCGGCGTCTCCTCTTTAATCGTGCATCAGCCACGTAGGCCATaGCGAGGTAGGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: EAARDRAGGPGVSSLIVHQPRRP*RGRQQC
Trigger: GCATTGCTGCCTACCTCGGCATGGCCTACGTGGCTG...ATGCACGATTAAAGAGGAGACGCCGGGACCCCCTGCCCGATCGCGCGCGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGGGGGTTCTCATCGGCCGGCTaGATCCCACACCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CIHHDDSCSAPGTVERRGFSSAG*IPHQPE
Trigger: CTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAA...CCCCCGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp CCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGGCTCGGAAGCCGTTGGCAGTaGCCGTGCGCAGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: PGWPGGPVPSPGNTRHWLGSRWQ*PCAAVL
Trigger: AAGTACTGCTGCGCACGGCCACTGCCAACGGCTTCC...GAGCCAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR CCA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTGTAGAAGACAAACTCTaGGTCCCGCTTGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAVEDKL*VPLVSL
Trigger: AAGGCTGACAAGCGGGACCCAGAGTTTGTCTTCTAC...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGTGTGTCACTGTGTCTTaGCCTTCACGAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAACVTVS*PSRAAS
Trigger: AGAGGCTGCTCGTGAAGGCCAAGACACAGTGACACA...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR TCA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCAAACGTTCTCACCTaGCGCCCCCACCCCGAACAC +
Preference number: 4 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSANVLT*RPHPEH
Trigger: GTGTTCGGGGTGGGGGCGTCAGGTGAGAACGTTTGC...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TCCTGCTGGATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCGCAGGTGCAGGCTGCTaGCCCGGCCCACGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SCWIICSVNTGMSGGVPFAGAGC*PGPRCP
Trigger: TGGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGC...GAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGATCCAGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp CCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGACGGCCGATGGCGAAGCGCTCGTaGTCCCAGGCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: PCRGRQQCQQPGAGQRRPMAKRS*SQASTS
Trigger: GGACGTGCTGGCCTGGGAGCACGAGCGCTTCGCCAT...CGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATTCCTTGTCCACCAGCTaGGCGGCCCGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHSLSTS*AARGWL
Trigger: CAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGA...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp TCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCTCTGGAGGGCAGAGGTaGTGGCCGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAGCIPHQPEPQTVSQCISGGQR*WPKNWW
Trigger: CCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGA...GATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp AGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGAGACGCCGCTCCCGTTaGAGTCCGCGCCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: RRSVSASIMTTRARPQGLRRRSR*SPRPAT
Trigger: TGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCT...CAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp CTTCACGTCCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTGAGGAAGGTCCTCCCGAGGCGGCTTaGACACGTGCAGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LHVLQVAAQVVLQRAEEGPPEAA*TRAGAG
Trigger: GCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGG...ACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp GCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGCCTCCCGAGGCGGCTTaGACACGTGCAGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AASHTSLSPRRSVSASIMPPEAA*TRAGAG
Trigger: GCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGG...CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCGGTGGCTCTCCAGGTaGGACAGCGTGAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSRWLSR*DSVKAG
Trigger: GCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCG...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACCCCCTGGTCCTATCGGTGGCTCTCCAGGTaGGACAGCGTGAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GRGAGRRTGGQSETPWSYRWLSR*DSVKAG
Trigger: GCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCG...ATAGGACCAGGGGGTCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCGCTGGCCGTCACGGTaGCTCTCCAGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSRWPSR*LSRWDS
Trigger: GCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCG...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGAGCGCTGGCCGTCACGGTaGCTCTCCAGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: VSQCIHHDDSCSAPGTVERWPSR*LSRWDS
Trigger: GCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCG...CTCCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCTGCTCGGCACGCACTaGGTAGGTTATATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGLLGTH*VGYIAK
Trigger: TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAG...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp ATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACGCATGCGGTACACGGTaGACTCGTGCGCGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: IPHQPEPQTVSQCIHHDDACGTR*TRARRR
Trigger: CCGACGCCGCGCACGAGTTCACCGTGTACCGCATGC...GTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR TCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGAGGGACCGCACGTCCATaGTGCTGCTGCGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRGTARP*CCCAGR
Trigger: ACGGCCAGCGCAGCAGCATCATGGACGTGCGGTCCC...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CTTCACGTCCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTGAGGAAGGTCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGT +
Preference number: 4 (lower is better)
Translates to: LHVLQVAAQVVLQRAEEGPAAGW*ASPSPS
Trigger: ACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGG...ACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGT +
Preference number: 4 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHPAAGW*ASPSPS
Trigger: ACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGG...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR TCA 90 bp GAGGCCGCGCGCGATCGGGCAGGGGGTCCCGGCGTCTCCTCTTTAATCGTGCATTCTTGTAGAGGAGGCTaGAGTGCTGGACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: EAARDRAGGPGVSSLIVHSCRGG*SAGQPR
Trigger: ACGTGGCTGTCCAGCACTTCAGCCTCCTCTACAAGA...ATGCACGATTAAAGAGGAGACGCCGGGACCCCCTGCCCGATCGCGCGCGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTAAGGGGAAGGCTGGGTaGTGCAGCTCCCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSKGKAG*CSSPSP
Trigger: TGGGCTCGGGGAGCTGCATCACCCAGCCTTCCCCTT...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp AAGAACGGACACACCGGGGTCTCCCTGAGCTCAACACGGGCCTCCTTCTCTCCCGCAAACGTTCTCACCTaGCGCCCCCACCCCGAACAC +
Preference number: 4 (lower is better)
Translates to: KNGHTGVSLSSTRASFSPANVLT*RPHPEH
Trigger: GTGTTCGGGGTGGGGGCGTCAGGTGAGAACGTTTGC...GGGAGAGAAGGAGGCCCGTGTTGAGCTCAGGGAGACCCCGGTGTGTCCGTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CAGCAAACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGCAAATTCTCTCATGGTaGCAAGGTGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QQTPPWATEGRRLRVPGQQILSW*QGGSCL
Trigger: CAGGCAGCTGCCACCTTGTCACCATGAGAGAATTTG...CTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp ATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCTCTGTCAGGCGTGCAGGTGCAGGCTaGTGCCCCGGCCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: IICSVNTGMSGGVPFSVRRAGAG*CPGPRC
Trigger: ACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACG...CCTGACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp TCTTTAATCGTGCATGTGTGCTTACACCAGACCGAGGGCGGCCGGCTCCCAGGAGGCGGCTTGGACACGTaGAGGTGCAGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLIVHVCLHQTEGGRLPGGGLDT*RCRLLP
Trigger: GGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCC...TCCTGGGAGCCGGCCGCCCTCGGTCTGGTGTAAGCACACATGCACGATTAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CACGTAGGCCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGGCGGCTTGGACACGTaGAGGTGCAGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HVGHAEVGSNANSQEQVKGGLDT*RCRLLP
Trigger: GGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCC...TTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGGCCTACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGCGCAGGAAGGCGTGCTaGAGGGTGCCCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQRRKAC*RVPSRG
Trigger: GCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCG...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CACGTAGGCCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAATCCTTGTCCACCAGCTaGGCGGCCCGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HVGHAEVGSNANSQEQVKSLSTS*AARGWL
Trigger: CAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGA...TTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGGCCTACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp TGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGGGGGTCAGCCTTGACGTGGTaGTGCTTCACGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CIHHDDSCSAPGTVERRGSALTW*CFTSFR
Trigger: CCTGAAGGACGTGAAGCAGCACCACGTCAAGGCTGA...CCCCCGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR GCA 90 bp GTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTGAGCCAGTCCTCCTGCTGGATCATCTaGTCTGTGAACACCGGCATG +
Preference number: 4 (lower is better)
Translates to: VLSLSTSCAARGWLVSQSSCWII*SVNTGM
Trigger: CATGCCGGTGTTCACAGAGCAGATGATCCAGCAGGA...GGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTCCATCTGGAAGCCGTTaGCAGTGGCCGTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPPSGSR*QWPCAA
Trigger: TGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGG...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CCA 90 bp AAGAACGGACACACCGGGGTCTCCCTGAGCTCAACACGGGCCTCCTTCTCTCCCGCCGCCCCTCCACGCTaGCAATCAGCCAGTCACTCA +
Preference number: 4 (lower is better)
Translates to: KNGHTGVSLSSTRASFSPAAPPR*QSASHS
Trigger: TGAGTGACTGGCTGATTGCCAGCGTGGAGGGGCGGC...GGGAGAGAAGGAGGCCCGTGTTGAGCTCAGGGAGACCCCGGTGTGTCCGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR CCA 90 bp AGGGCCTCTGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGCGGGCAGTCGGCGGATaGCGAAGCGCTCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RASAMILVLRVRVLESTRRAVGG*RSARAP
Trigger: GGGAGCACGAGCGCTTCGCCATCCGCCGACTGCCCG...CCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp AAGTCCGTAGCCTGGCCCCGGGACGTCTCCCAAGCTCTCCTCCAAGGAAGTTCACGGGCAGGAAGACGATaGAGCCGAGCGGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: KSVAWPRDVSQALLQGSSRAGRR*SRAADK
Trigger: CTTGTCTGCCGCTCGGCTTCATCGTCTTCCTGCCCG...TGAACTTCCTTGGAGGAGAGCTTGGGAGACGTCCCGGGGCCAGGCTACGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR TCA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCCAGGTGGGACAGCGTaGAGGCGGGCAGTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPPGGTA*RRAVGG
Trigger: TCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGG...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR TCA 90 bp TCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCCTGTCAGGTTGTAGATaGCTCGAGTCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSAGCIPHQPEPQTVSQCLSGCR*LESGPL
Trigger: CAGAGGCCCTGACTCGAGTCATCTACAACCTGACAG...GCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR TCA 90 bp AGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGTGCTCCAGCGTGCTaGGGAAGGTGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SPRRSVSASIMTTRARPQGAPAC*GRCCPC
Trigger: ACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACC...CTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp CGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGCCCGCTTGTCAGCCTTaGCGTGGTGCTGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: RSVSASIMTTRARPQGLWPACQP*RGAASR
Trigger: ACGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGG...CCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp CCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGGCTCCAAAGACGGCCGGCTTaGCTCTGTACGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: PGWPGGPVPSPGNTRHWLQRRPA*LCTHSS
Trigger: TGATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTG...GAGCCAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp ATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACCCCAGAGGCCAGTGGTaGTGGGCCCTTGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: IPHQPEPQTVSQCIHHDDPRGQW*WALGQV
Trigger: GACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGG...GTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp GCCCGGACCTTCCTCTCTGAGTTCCAGGAAGGGTGGCCCCAGAGGCCATGCCCCTCAGTGCATCCATCATaGCGACCTGTCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ARTFLSEFQEGWPQRPCPSVHPS*RPVQEG
Trigger: TCCTTCCTGGACAGGTCGTCATGATGGATGCACTGA...GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCGCAGGTGCAGGCTGCTaGCCCGGCCCACGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPAGAGC*PGPRCP
Trigger: TGGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGC...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp AGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGCAGCCACGTAGGCCATaGCGAGGTAGGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: SPRRSVSASIMTTRARPQQPRRP*RGRQQC
Trigger: GCATTGCTGCCTACCTCGGCATGGCCTACGTGGCTG...CTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR GCA 90 bp CACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCATCCCCGGGCCACCTCCTaGCTCCCAGTACTCCACCCG +
Preference number: 4 (lower is better)
Translates to: HPDRSLLASMQALPKFSHPRATS*LPVLHP
Trigger: CGGGTGGAGTACTGGGAGGCAGGAGGTGGCCCGGGG...ATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TCTCCTTCCCAGCAAACGTTCTCACCTGACGCCCCCACCCCGAACACATCCTTTCGGAAGGGAGACGGCTaGGGGTGCCAGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: SPSQQTFSPDAPTPNTSFRKGDG*GCQART
Trigger: AGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCG...AAAGGATGTGTTCGGGGTGGGGGCGTCAGGTGAGAACGTTTGCTGGGAAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACCCCCTGGTCCTATCTCACCCCTCCAGGCTaGAGGTTCTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRGAGRRTGGQSETPWSYLTPPG*RFWRAE
Trigger: CTCTGCCCTCCAGAACCTGCAGCCTGGAGGGGTGAG...ATAGGACCAGGGGGTCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTAAGCTCCCTCCAAAATaGTGGCCCCGTGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPKLPPK*WPRGTQ
Trigger: CTGGGTGCCACGGGGCCAGCATTTTGGAGGGAGCTT...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCACCGAGTCCAGCTaGTCCTGCTGGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: SSAGCIPHQPEPQTVSQCITESS*SCWIIC
Trigger: GCAGATGATCCAGCAGGAGCAGCTGGACTCGGTGAT...GCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACCCCCTGGTCCTATCCGCTGGTGACCATCTaGAAGCCGTTGGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGAGRRTGGQSETPWSYPLVTI*KPLAVA
Trigger: GGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGG...ATAGGACCAGGGGGTCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR CCA 90 bp AGGGCCTCTGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGCGCTGGCCGTCACGGTaGCTCTCCAGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: RASAMILVLRVRVLESTRRWPSR*LSRWDS
Trigger: GCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCG...CCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSMMLLR*PSRWLS
Trigger: GGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCAT...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp AAGTCCGTAGCCTGGCCCCGGGACGTCTCCCAAGCTCTCCTCCAAGGAAGTTCAATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KSVAWPRDVSQALLQGSSMMLLR*PSRWLS
Trigger: GGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCAT...TGAACTTCCTTGGAGGAGAGCTTGGGAGACGTCCCGGGGCCAGGCTACGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGAACACCGGCATGTCTaGGGGTGTCCCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSEHRHV*GCPLLC
Trigger: ACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTC...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp TGCTGGATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCTCTTGCGCGGCCCGCGGCTaGTTGGTGAGCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: CWIICSVNTGMSGGVPFSCAARG*LVSQSI
Trigger: GATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCA...AGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGATCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp GCCCGCGGCTGGTTGGTGAGCCAGTCCATCACCGAGTCCAGCTGCTCCTGCTGGTTGTCAGCCTTGACGTaGTGCTGCTTCACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARGWLVSQSITESSCSCWLSALT*CCFTSF
Trigger: GAAGGACGTGAAGCAGCACCACGTCAAGGCTGACAA...CCAGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp TGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGTGGCAAAGCCTGGATaGCCTGGGGGCCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: CIPHQPEPQTVSQCIHHDVAKPG*PGGPVP
Trigger: CGGTACTGGGCCCCCAGGCCATCCAGGCTTTGCCAC...GTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCGAGTTCCAGGAAGGGTaGCCCCAGAGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: GTQTGACWLACKHSPNSLEFQEG*PQRPCP
Trigger: GGGGCATGGCCTCTGGGGCCACCCTTCCTGGAACTC...GAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACCTTGGGCAAGTCTCTaGAGGAGGCGGGCAACCCGC +
Preference number: 4 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRPWASL*RRRATR
Trigger: GCGGGTTGCCCGCCTCCTCCAGAGACTTGCCCAAGG...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GCCCGCGGCTGGTTGGTGAGCCAGTCCATCACCGAGTCCAGCTGCTCCTGCTGGTCCAGCTGCTCCTGCTaGATCATCTGCTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: ARGWLVSQSITESSCSCWSSCSC*IICSVN
Trigger: GTTCACAGAGCAGATGATCCAGCAGGAGCAGCTGGA...CCAGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACGTCCTCCGCCAGGTTaGTCCGCTTGTGCACCATGG +
Preference number: 4 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRRPPPG*SACAPW
Trigger: CCATGGTGCACAAGCGGATCAACCTGGCGGAGGACG...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp AATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCGGGACCGCACGTCCATaGTGCTGCTGCGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: NMALFSHRPAASHTSLSPGTARP*CCCAGR
Trigger: ACGGCCAGCGCAGCAGCATCATGGACGTGCGGTCCC...GGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR TCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTGGTGCTCCAGCGTGCTaGGGAAGGTGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSGAPAC*GRCCPC
Trigger: ACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACC...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR TCA 90 bp TTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCCCGGACCTTCCTCTCTaGGTTCCAGGAAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FIFSSAGCIPHQPEPQTVPDLPL*VPGRVA
Trigger: GGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGG...GACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp ATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACCATCCCACACCAGCCTaGGCCCCAGACGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: IPHQPEPQTVSQCIHHDDHPTPA*APDGQS
Trigger: TGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATG...GTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CACGTAGGCCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAATCTGTCGCACGTCCATaGTGCTGCTGCGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: HVGHAEVGSNANSQEQVKSVARP*CCCAGR
Trigger: ACGGCCAGCGCAGCAGCATCATGGACGTGCGACAGA...TTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGGCCTACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp CTTCACGTCCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTGAGGAAGGTCAGCCTAGGAGACCGTaGGACTCTGTCGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: LHVLQVAAQVVLQRAEEGQPRRP*DSVARP
Trigger: TGGACGTGCGACAGAGTCTCACGGTCTCCTAGGCTG...ACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp CCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGACGGCCGGGATCATCTGCTCTGTaGACACCGGCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PCRGRQQCQQPGAGQRRPGSSAL*TPACLG
Trigger: CCCCAGACATGCCGGTGTTCACAGAGCAGATGATCC...CGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp GGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCGTGTCCACTCACTCGTaGTCGGCCCCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: GTQTGACWLACKHSPNSLVSTHS*SAPGTV
Trigger: CACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACAC...GAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCTGGCCCCAGAGGCCATaGCCCAAGTCCTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FIFSSAGCIPHQPEPQTVWPQRP*PKSSPS
Trigger: GGAAGGAGAGGACTTGGGGCATGGCCTCTGGGGCCA...GACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGAAGCTCCCTCCAAAATaGTGGCCCCGTGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: AASHTSLSPRRSVSASIMKLPPK*WPRGTQ
Trigger: CTGGGTGCCACGGGGCCAGCATTTTGGAGGGAGCTT...CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp AAGAACGGACACACCGGGGTCTCCCTGAGCTCAACACGGGCCTCCTTCTCTCCCGAACACCGGCATGTCTaGGGGTGTCCCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KNGHTGVSLSSTRASFSPEHRHV*GCPLLC
Trigger: ACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTC...GGGAGAGAAGGAGGCCCGTGTTGAGCTCAGGGAGACCCCGGTGTGTCCGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCTGTGTCACTGTGTCTTaGCCTTCACGAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSAGCIPHQPEPQTVSQCCVTVS*PSRAAS
Trigger: AGAGGCTGCTCGTGAAGGCCAAGACACAGTGACACA...GCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATCCAGGGAGGACCAACTaGCCGTGGCAAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHPGRTN*PWQSLD
Trigger: ATCCAGGCTTTGCCACGGCCAGTTGGTCCTCCCTGG...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCCAGCAAACACCTCCCTaGGCCACGGAAGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: GTQTGACWLACKHSPNSLQQTPP*ATEGRR
Trigger: CCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTG...GAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGTCAGGGCCTCTGCAATaGTCCTCGTGTTACGGGTCA +
Preference number: 4 (lower is better)
Translates to: RSVSASIMTTRARPQGLWSGPLQ*SSCYGS
Trigger: TGACCCGTAACACGAGGATCATTGCAGAGGCCCTGA...CCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTCTGTCAGGTTGTAGATaGCTCGAGTCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPLSGCR*LESGPL
Trigger: CAGAGGCCCTGACTCGAGTCATCTACAACCTGACAG...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCTGCATCTGCTCTGTaGACACCGGCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HQPEPQTVSQCIHHDDSCSASAL*TPACLG
Trigger: CCCCAGACATGCCGGTGTTCACAGAGCAGATGCAGA...GCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp TCCTGCTGGATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCCCCGCTTGTCAGCCTTaGCGTGGTGCTGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: SCWIICSVNTGMSGGVPFPACQP*RGAASR
Trigger: ACGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGG...GAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGATCCAGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp AAGAACGGACACACCGGGGTCTCCCTGAGCTCAACACGGGCCTCCTTCTCTCCCTCTTGTAGAGGAGGCTaGAGTGCTGGACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: KNGHTGVSLSSTRASFSPSCRGG*SAGQPR
Trigger: ACGTGGCTGTCCAGCACTTCAGCCTCCTCTACAAGA...GGGAGAGAAGGAGGCCCGTGTTGAGCTCAGGGAGACCCCGGTGTGTCCGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCATCCCAGAGGCCAGTGGTaGTGGGCCCTTGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HPDRSLLASMQALPKFSHPRGQW*WALGQV
Trigger: GACTTGCCCAAGGGCCCATCACCACTGGCCTCTGGG...ATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGCATCCCACACCAGCCTaGGCCCCAGACGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQHPTPA*APDGQS
Trigger: TGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATG...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGAGTCCAGCTGCTCCTaGTGGATCTGCATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EPQTVSQCIHHDDSCSAPESSCS*WICICS
Trigger: AGAGCAGATGCAGATCCAGCAGGAGCAGCTGGACTC...TGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR GCA 90 bp AGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGCGAGGTAGGCAGCAATaGCAACAGCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RRSVSASIMTTRARPQGLRGRQQ*QQPGAG
Trigger: ACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCG...CAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR GCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACACGACGCCTGGTCTaGGGGGTGGAGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQTRRLV*GVEGSV
Trigger: GACAGAACCCTCCACCCCGCAGACCAGGCGTCGTGT...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCTGCCAGGCCAGGACTTaGCCAGCTCAAGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: FIFSSAGCIPHQPEPQTVCQART*PAQVPS
Trigger: GGAAGGGACTTGAGCTGGGCAAGTCCTGGCCTGGCA...GACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGATCTGGAGGGCAGAGGTaGTGGCCGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRSGGQR*WPKNWW
Trigger: CCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGA...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTCAGACGGTCAGTCAGTaGATCCATCATGACGACTCG +
Preference number: 4 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSQTVSQ*IHHDDS
Trigger: CGAGTCGTCATGATGGATGCACTGACTGACCGTCTG...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGCCGGACGACGTCCTaGGGCACGGCGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPACRTTS*GTAAMA
Trigger: GGCCATGGCCGCCGTGCCCCAGGACGTCGTCCGGCA...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR CCA 90 bp AGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGTGTCCTGAAGCAGGCTaGAGTCTGTGTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPRRSVSASIMTTRARPQCPEAG*SLCGPG
Trigger: ACCTGGACCACACAGACTCCAGCCTGCTTCAGGACA...CTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp AGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGTCCGCTTGTGCACCATaGAGAACCGTACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPRRSVSASIMTTRARPQSACAP*RTVPQG
Trigger: TCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGA...CTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp ATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGAGGAGAAGGGGAAGGCTaGGTGATGCAGCTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: MALFSHRPAASHTSLSPRGEGEG*VMQLPE
Trigger: CTCGGGGAGCTGCATCACCCAGCCTTCCCCTTCTCC...TCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TCTTTAATCGTGCATGTGTGCTTACACCAGACCGAGGGCGGCCGGCTCCCAGGAAGGACCAACTGGCCGTaGCAAAGCCTGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLIVHVCLHQTEGGRLPGRTNWP*QSLDGL
Trigger: CAGGCCATCCAGGCTTTGCCACGGCCAGTTGGTCCT...TCCTGGGAGCCGGCCGCCCTCGGTCTGGTGTAAGCACACATGCACGATTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGCACACACACGACGCCTaGTCTGCGGGGTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQHTHDA*SAGWRV
Trigger: AACCCTCCACCCCGCAGACCAGGCGTCGTGTGTGTG...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp CACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCATCCTTGGGCAAGTCTCTaGAGGAGGCGGGCAACCCGC +
Preference number: 4 (lower is better)
Translates to: HPDRSLLASMQALPKFSHPWASL*RRRATR
Trigger: GCGGGTTGCCCGCCTCCTCCAGAGACTTGCCCAAGG...ATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGAAAGGTGGCAGCTGCCTaGGTCCCAGAGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRKVAAA*VPESQH
Trigger: GTGCTGAGACTCTGGGACCCAGGCAGCTGCCACCTT...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGACAGGAGCCTGCTaGCTAGCATGCAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSQTGAC*LACKHS
Trigger: GGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTG...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGCGTAGTGGGCCACGATaGCGATGGTGGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQRSGPR*RWWEGP
Trigger: AGGACCTTCCCACCATCGTCATCGTGGCCCACTACG...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000587740.5
CDS-3UTR TCA 90 bp GTCAGGGCCTCTGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGTCCTCCGCCAGGTTaGTCCGCTTGTGCACCATGG +
Preference number: 4 (lower is better)
Translates to: VRASAMILVLRVRVLESTRPPPG*SACAPW
Trigger: CCATGGTGCACAAGCGGATCAACCTGGCGGAGGACG...GGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp CTTCACGTCCTTCAGGTAGCGGCTCAGGTGGTGCTCCAGCGTGCTGAGGAAGGTTCAGGGCCTCTGCAATaGTCCTCGTGTTACGGGTCA +
Preference number: 4 (lower is better)
Translates to: LHVLQVAAQVVLQRAEEGSGPLQ*SSCYGS
Trigger: TGACCCGTAACACGAGGATCATTGCAGAGGCCCTGA...ACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp AGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGCTGTCAGGTTGTAGATaGCTCGAGTCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRSVSASIMTTRARPQGLLSGCR*LESGPL
Trigger: CAGAGGCCCTGACTCGAGTCATCTACAACCTGACAG...CAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp ATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACCCGCTTGTCAGCCTTaGCGTGGTGCTGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: MALFSHRPAASHTSLSPRPACQP*RGAASR
Trigger: ACGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGG...TCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR TCA 90 bp CCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGACGGCCGCAAAGACGGCCGGCTTaGCTCTGTACGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: PCRGRQQCQQPGAGQRRPQRRPA*LCTHSS
Trigger: TGATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTG...CGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp GAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCACAAAGACGGCCGGCTTaGCTCTGTACGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: EPQTVSQCIHHDDSCSAPQRRPA*LCTHSS
Trigger: TGATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTG...TGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR TCA 90 bp GCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGTCTTGTAGAGGAGGCTaGAGTGCTGGACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: AASHTSLSPRRSVSASIMSCRGG*SAGQPR
Trigger: ACGTGGCTGTCCAGCACTTCAGCCTCCTCTACAAGA...CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTTGCAGGTCGTACTGCTaGATGCGGTACACGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSCRSYC*MRYTVN
Trigger: GTTCACCGTGTACCGCATGCAGCAGTACGACCTGCA...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR GCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGCGTTGGCAGTGGCCGTaGGCAGCAGTACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQRWQWP*AAVLQQ
Trigger: CTGCTGAAGTACTGCTGCGCACGGCCACTGCCAACG...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR GCA 90 bp GGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAAGGCGTGCTGCAGGGTaGCCTCCCGAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GDHSIWLYFLIGRLHPTPRRAAG*PPEAAW
Trigger: CCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCT...TGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGACGGCCGTCGAGTCAGGGCCTCTaGAATGATCCTCGTGTTACG +
Preference number: 4 (lower is better)
Translates to: PCRGRQQCQQPGAGQRRPSSQGL*NDPRVT
Trigger: CGTAACACGAGGATCATTGCAGAGGCCCTGACTCGA...CGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp GAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCATGCTGGATCTGCATCTaGTCTGTGAACACCGGCATG +
Preference number: 4 (lower is better)
Translates to: EPQTVSQCIHHDDSCSAPCWICI*SVNTGM
Trigger: CATGCCGGTGTTCACAGAGCAGATGCAGATCCAGCA...TGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR GCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATATCACCGAGTCCAGCTaGTCCTGCTGGATCTGCATC +
Preference number: 4 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHITESS*SCWICI
Trigger: GATGCAGATCCAGCAGGAGCAGCTGGACTCGGTGAT...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000587740.5
CDS-3UTR GCA 90 bp AAGTCCGTAGCCTGGCCCCGGGACGTCTCCCAAGCTCTCCTCCAAGGAAGTTCAGAGTCCAGCTGCTCCTaGTGGATCATCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KSVAWPRDVSQALLQGSSESSCS*WIICSV
Trigger: CACAGAGCAGATGATCCAGCAGGAGCAGCTGGACTC...TGAACTTCCTTGGAGGAGAGCTTGGGAGACGTCCCGGGGCCAGGCTACGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592737.5
CDS-3UTR CCA 90 bp AGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGAGGCTGGAGTCTGTGTaGTCCAGGTTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRSVSASIMTTRARPQGLRLESV*SRLSSS
Trigger: GCTGGAAGACAACCTGGACCACACAGACTCCAGCCT...CAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATAGGCTGGAGTCTGTGTaGTCCAGGTTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHRLESV*SRLSSS
Trigger: GCTGGAAGACAACCTGGACCACACAGACTCCAGCCT...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACCCCCTGGTCCTATTGTCCTGAAGCAGGCTaGAGTCTGTGTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRGAGRRTGGQSETPWSYCPEAG*SLCGPG
Trigger: ACCTGGACCACACAGACTCCAGCCTGCTTCAGGACA...ATAGGACCAGGGGGTCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TGGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCCGGGCAGTCGGCGGATaGCGAAGCGCTCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: WRSFNMALFSHRPAASHTRAVGG*RSARAP
Trigger: GGGAGCACGAGCGCTTCGCCATCCGCCGACTGCCCG...GGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPMMLLR*PSRWLS
Trigger: GGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCAT...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTTGTGTCACTGTGTCTTaGCCTTCACGAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPCVTVS*PSRAAS
Trigger: AGAGGCTGCTCGTGAAGGCCAAGACACAGTGACACA...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CCA 90 bp CACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCATGGAGGGCAGAGGTGCTaGCCGAAGAACTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPDRSLLASMQALPKFSHGGQRC*PKNWWP
Trigger: TGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCC...ATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TCTCCTTCCCAGCAAACGTTCTCACCTGACGCCCCCACCCCGAACACATCCTTTAAGGTGGCAGCTGCCTaGGTCCCAGAGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPSQQTFSPDAPTPNTSFKVAAA*VPESQH
Trigger: GTGCTGAGACTCTGGGACCCAGGCAGCTGCCACCTT...AAAGGATGTGTTCGGGGTGGGGGCGTCAGGTGAGAACGTTTGCTGGGAAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp ATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACAACTGGTGGCCAAAGTaGGACCCCCTGGTCCTATCT +
Preference number: 4 (lower is better)
Translates to: IPHQPEPQTVSQCIHHDDNWWPK*DPLVLS
Trigger: AGATAGGACCAGGGGGTCTCACTTTGGCCACCAGTT...GTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp ATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACTCCGTGTTCAGCACTaGATTCCGTGTGCCGTAGGG +
Preference number: 4 (lower is better)
Translates to: MALFSHRPAASHTSLSPRLRVQH*IPCAVG
Trigger: CCCTACGGCACACGGAATGCAGTGCTGAACACGGAG...TCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR GCA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCTGTAGGCGGCGTGCGTaGGCTTGTAGGTGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPCRRRA*ACRCRA
Trigger: GGCTCTACACCTACAAGCGCACGCACGCCGCCTACA...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000587740.5
CDS-3UTR GCA 90 bp GTCTGGGGGTGTCCCCTTCTCTGTCAGGTTGTAGATGACTCGAGTCAGGGCCTCTCAGCCTTGACGTGGTaGTGCTTCACGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VWGCPLLCQVVDDSSQGLSALTW*CFTSFR
Trigger: CCTGAAGGACGTGAAGCAGCACCACGTCAAGGCTGA...GAGGCCCTGACTCGAGTCATCTACAACCTGACAGAGAAGGGGACACCCCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp GGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGGAGACGGCTGCGGGTaGCAGGCCAGGACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GDHSIWLYFLIGRLHPTPGDGCG*QARTCP
Trigger: TGGGCAAGTCCTGGCCTGGCACCCGCAGCCGTCTCC...TGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTGCCTGCTGGCTAGCATaGAAGCACTCCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSACWLA*KHSPNS
Trigger: AGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGC...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCACGGTGGCTCTCCAGGTaGGACAGCGTGAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GDHSIWLYFLIGRLHPTPRWLSR*DSVKAG
Trigger: GCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCG...TGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGGACCTTCACGATTCAAAATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PRVTGQGLRIHPGPSRFKMMLLR*PSRWLS
Trigger: GGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCAT...TTTGAATCGTGAAGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGCGCGGCCCGCGGCTaGTTGGTGAGCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPACAARG*LVSQSI
Trigger: GATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCA...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp CACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTTGTCAGCCTTGACGTaGTGCTGCTTCACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQPEPQTVSQCIHHDDSCLSALT*CCFTSF
Trigger: GAAGGACGTGAAGCAGCACCACGTCAAGGCTGACAA...GCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CCA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCGTGGCAAAGCCTGGATaGCCTGGGGGCCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: FNMALFSHRPAASHTSLSVAKPG*PGGPVP
Trigger: CGGTACTGGGCCCCCAGGCCATCCAGGCTTTGCCAC...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp TGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACTCAGTGCATCCATCATaGCGACCTGTCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CIPHQPEPQTVSQCIHHDSVHPS*RPVQEG
Trigger: TCCTTCCTGGACAGGTCGTCATGATGGATGCACTGA...GTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GTCTGGGGGTGTCCCCTTCTCTGTCAGGTTGTAGATGACTCGAGTCAGGGCCTCAGGTTGATCCGCTTGTaGACCATGGAGAACCGTACC +
Preference number: 4 (lower is better)
Translates to: VWGCPLLCQVVDDSSQGLRLIRL*TMENRT
Trigger: GGTACGGTTCTCCATGGTGCACAAGCGGATCAACCT...GAGGCCCTGACTCGAGTCATCTACAACCTGACAGAGAAGGGGACACCCCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp TGGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCATGGCGAAGCGCTCGTaGTCCCAGGCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: WRSFNMALFSHRPAASHTMAKRS*SQASTS
Trigger: GGACGTGCTGGCCTGGGAGCACGAGCGCTTCGCCAT...GGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp TCTCCTTCCCAGCAAACGTTCTCACCTGACGCCCCCACCCCGAACACATCCTTTTCAGCCTTGACGTGGTaGTGCTTCACGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPSQQTFSPDAPTPNTSFSALTW*CFTSFR
Trigger: CCTGAAGGACGTGAAGCAGCACCACGTCAAGGCTGA...AAAGGATGTGTTCGGGGTGGGGGCGTCAGGTGAGAACGTTTGCTGGGAAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAACGAGGTAGGCAGCAATaGCAACAGCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKRGRQQ*QQPGAG
Trigger: ACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCG...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GTCAGGGCCTCTGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGAGGTAGGCAGCAATaGCAACAGCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VRASAMILVLRVRVLESTRGRQQ*QQPGAG
Trigger: ACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCG...GGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAAACCCAGACAGGAGCCTaGTGGCTAGCATGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKTQTGA*WLACKH
Trigger: GTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGT...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GGCACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCTCCTGCTGGATCATCTaGTCTGTGAACACCGGCATG +
Preference number: 4 (lower is better)
Translates to: GTQTGACWLACKHSPNSLSCWII*SVNTGM
Trigger: CATGCCGGTGTTCACAGAGCAGATGATCCAGCAGGA...GAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592737.5
CDS-3UTR GCA 90 bp TGCTGGATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCTCTATCACCGAGTCCAGCTaGTCCTGCTGGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: CWIICSVNTGMSGGVPFSITESS*SCWIIC
Trigger: GCAGATGATCCAGCAGGAGCAGCTGGACTCGGTGAT...AGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGATCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp TGGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCCGTACCTCAGGGAACTaGTGCGCGGCCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: WRSFNMALFSHRPAASHTRTSGN*CAATVS
Trigger: GGAGACGGTGGCCGCGCACCAGTTCCCTGAGGTACG...GGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCCGTACCTCAGGGAACTaGTGCGCGGCCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPARTSGN*CAATVS
Trigger: GGAGACGGTGGCCGCGCACCAGTTCCCTGAGGTACG...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGGTAGAAGACAAACTCTaGGTCCCGCTTGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AASHTSLSPRRSVSASIMVEDKL*VPLVSL
Trigger: AAGGCTGACAAGCGGGACCCAGAGTTTGTCTTCTAC...CATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACCCCCTGGTCCTATGTAGAAGACAAACTCTaGGTCCCGCTTGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GRGAGRRTGGQSETPWSYVEDKL*VPLVSL
Trigger: AAGGCTGACAAGCGGGACCCAGAGTTTGTCTTCTAC...ATAGGACCAGGGGGTCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp CACCCAGACAGGAGCCTGCTGGCTAGCATGCAAGCACTCCCCAAATTCTCTCATTCAGGGCCTCTGCAATaGTCCTCGTGTTACGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPDRSLLASMQALPKFSHSGPLQ*SSCYGS
Trigger: TGACCCGTAACACGAGGATCATTGCAGAGGCCCTGA...ATGAGAGAATTTGGGGAGTGCTTGCATGCTAGCCAGCAGGCTCCTGTCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCCATCCCACACCAGCCTaGGCCCCAGACGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPAHPTPA*APDGQS
Trigger: TGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATG...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp ATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGATCGAGTCAGGGCCTCTaGAATGATCCTCGTGTTACG +
Preference number: 4 (lower is better)
Translates to: MALFSHRPAASHTSLSPRSSQGL*NDPRVT
Trigger: CGTAACACGAGGATCATTGCAGAGGCCCTGACTCGA...TCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCGATGACATCAGACCCTaGAGTCGGAGAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPDDIRP*SRRRGR
Trigger: CCTTCCCCTTCTCCGACTGCAGGGTCTGATGTCATC...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAAGATGACATCAGACCCTaGAGTCGGAGAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKDDIRP*SRRRGR
Trigger: CCTTCCCCTTCTCCGACTGCAGGGTCTGATGTCATC...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp ATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACAGACGGTCAGTCAGTaGATCCATCATGACGACCTG +
Preference number: 4 (lower is better)
Translates to: MALFSHRPAASHTSLSPRQTVSQ*IHHDDL
Trigger: CAGGTCGTCATGATGGATGCACTGACTGACCGTCTG...TCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGGACCTTCAGAACACCGGCATGTCTaGGGGTGTCCCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: CNDPRVTGQGLRIHPGPSEHRHV*GCPLLC
Trigger: ACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTC...TGAAGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp TTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCGTAGAAGACAAACTCTaGGTCCCGCTTGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FIFSSAGCIPHQPEPQTVVEDKL*VPLVSL
Trigger: AAGGCTGACAAGCGGGACCCAGAGTTTGTCTTCTAC...GACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCCAGCAAACACCTCCCTaGGCCACGGAAGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPAQQTPP*ATEGRR
Trigger: CCGTCTCCCTTCCGTGGCCCAGGGAGGTGTTTGCTG...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp ATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACAAAGTGAGACCCCCTaGTCCTATCTGGACAGAACC +
Preference number: 4 (lower is better)
Translates to: MALFSHRPAASHTSLSPRQSETP*SYLDRT
Trigger: GGTTCTGTCCAGATAGGACCAGGGGGTCTCACTTTG...TCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR TCA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTCTGTACCCCGCTGGTaGCCATCTGGAAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPASVPRW*PSGSRW
Trigger: CCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGA...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR TCA 90 bp TGTACGCATTCATCACTTGCTTCAGCTGGTCGTAGAAGACAAACTCTGGGTCCCGGTGCTCCAGCGTGCTaGGGAAGGTGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: CTHSSLASAGRRRQTLGPGAPAC*GRCCPC
Trigger: ACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACC...GGGACCCAGAGTTTGTCTTCTACGACCAGCTGAAGCAAGTGATGAATGCGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR TCA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCGGATCATCTGCTCTGTaGACACCGGCATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FNMALFSHRPAASHTSLSGSSAL*TPACLG
Trigger: CCCCAGACATGCCGGTGTTCACAGAGCAGATGATCC...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592737.5
CDS-3UTR GCA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCAGGTTGATCCGCTTGTaGACCATGGAGAACCGTACC +
Preference number: 4 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPRLIRL*TMENRT
Trigger: GGTACGGTTCTCCATGGTGCACAAGCGGATCAACCT...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAATGCTGGATCTGCATCTaGTCTGTGAACACCGGCATG +
Preference number: 4 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKCWICI*SVNTGM
Trigger: CATGCCGGTGTTCACAGAGCAGATGCAGATCCAGCA...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR GCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGTTAATCGTGCATGTGTaGTTACACCAGACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQLIVHV*LHQTEG
Trigger: GCCCTCGGTCTGGTGTAAGCACACATGCACGATTAA...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR GCA 90 bp TGGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCTTCTCATCGGCCGGCTaGATCCCACACCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WRSFNMALFSHRPAASHTFSSAG*IPHQPE
Trigger: CTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAA...GGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp CCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGGACCTTCACGATTCAAAGAGTCCAGCTGCTCCTaGTGGATCATCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRVTGQGLRIHPGPSRFKESSCS*WIICSV
Trigger: CACAGAGCAGATGATCCAGCAGGAGCAGCTGGACTC...TTTGAATCGTGAAGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp CCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGGACCTTCACGATTCAAATCCGCTTGTGCACCATaGAGAACCGTACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRVTGQGLRIHPGPSRFKSACAP*RTVPQG
Trigger: TCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGA...TTTGAATCGTGAAGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCGAACACCGGCATGTCTaGGGGTGTCCCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FNMALFSHRPAASHTSLSEHRHV*GCPLLC
Trigger: ACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTC...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAATGTGTCACTGTGTCTTaGCCTTCACGAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKCVTVS*PSRAAS
Trigger: AGAGGCTGCTCGTGAAGGCCAAGACACAGTGACACA...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TGCAGGTTCTGGAGGGCAGAGGTGCTGGCCGAAGAACTGGTGGCCAAAGTGAGACTGCTCGGCACGCACTaGGTAGGTTATATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: CRFWRAEVLAEELVAKVRLLGTH*VGYIAK
Trigger: TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAG...TCTCACTTTGGCCACCAGTTCTTCGGCCAGCACCTCTGCCCTCCAGAACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CCA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCTCCAGCTGCTCCTGCTaGATCTGCATCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FNMALFSHRPAASHTSLSSSCSC*ICICSV
Trigger: CACAGAGCAGATGCAGATCCAGCAGGAGCAGCTGGA...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000587740.5
CDS-3UTR TCA 90 bp CATTCATCACTTGCTTCAGCTGGTCGTAGAAGACAAACTCTGGGTCCCGCTTGTCTGTCAGGTTGTAGATaGCTCGAGTCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSSLASAGRRRQTLGPACLSGCR*LESGPL
Trigger: CAGAGGCCCTGACTCGAGTCATCTACAACCTGACAG...ACAAGCGGGACCCAGAGTTTGTCTTCTACGACCAGCTGAAGCAAGTGATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR GCA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCAGGTTGATCCGCTTGTaGACCATGGAGAACCGTACC +
Preference number: 4 (lower is better)
Translates to: FNMALFSHRPAASHTSLSRLIRL*TMENRT
Trigger: GGTACGGTTCTCCATGGTGCACAAGCGGATCAACCT...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCTCGAGTCAGGGCCTCTaGAATGATCCTCGTGTTACG +
Preference number: 4 (lower is better)
Translates to: FNMALFSHRPAASHTSLSSSQGL*NDPRVT
Trigger: CGTAACACGAGGATCATTGCAGAGGCCCTGACTCGA...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR GCA 90 bp GGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAATCACCGAGTCCAGCTaGTCCTGCTGGATCTGCATC +
Preference number: 4 (lower is better)
Translates to: GDHSIWLYFLIGRLHPTPITESS*SCWICI
Trigger: GATGCAGATCCAGCAGGAGCAGCTGGACTCGGTGAT...TGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000587740.5
CDS-3UTR GCA 90 bp TGGCGATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCTCAGCCTTGACGTGGTaGTGCTTCACGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WRSFNMALFSHRPAASHTSALTW*CFTSFR
Trigger: CCTGAAGGACGTGAAGCAGCACCACGTCAAGGCTGA...GGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGTCCTGAAGCAGGCTaGAGTCTGTGTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPACPEAG*SLCGPG
Trigger: ACCTGGACCACACAGACTCCAGCCTGCTTCAGGACA...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp TGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGGACCTTCAGTAGAAGACAAACTCTaGGTCCCGCTTGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: CNDPRVTGQGLRIHPGPSVEDKL*VPLVSL
Trigger: AAGGCTGACAAGCGGGACCCAGAGTTTGTCTTCTAC...TGAAGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGGCGATCATTCAATATaGCTTTATTTTCTCATCGGC +
Preference number: 4 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHGDHSI*LYFLIG
Trigger: GCCGATGAGAAAATAAAGCCATATTGAATGATCGCC...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CCA 90 bp TGCTGGATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCTCTTTAAAATGTGGACTTTaGGCCAGGCAAGGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CWIICSVNTGMSGGVPFSLKCGL*ARQGSS
Trigger: AGAGCTACCTTGCCTGGCCCAAAGTCCACATTTTAA...AGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGATCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586904.1
3UTR CAA 72 bp AAAGACGGCCGGCTTGACTCTGTACGCATTCATCACTaGCTTCAGCTGGTCGTAGAAGACAAACTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KDGRLDSVRIHH*LQLVVEDKLWV
Trigger: GACCCAGAGTTTGTCTTCTACGACCAGCTGAAGCAAGTGATGAATGCGTACAGAGTCAAGCCGGCCGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CCA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGGGCGATCATTCAATATaGCTTTATTTTCTCATCGGC +
Preference number: 4 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQGDHSI*LYFLIG
Trigger: GCCGATGAGAAAATAAAGCCATATTGAATGATCGCC...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS GCA 90 bp CTGAGGTCCTGTGGGCACCGCGGCGAACCGCCCCGCCAGCCGCGCTaGCTGTCGGGAATTGTAGTCCGTCCGTCCGGCGCTCGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: LRSCGHRGEPPRQPR*LSGIVVRPSGARGA
Trigger: GGCTCCGCGAGCGCCGGACGGACGGACTACAATTCCCGACAGGCAGCGCGGCTGGCGGGGCGGTTCGCCGCGGTGCCCACAGGACCTCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR CAA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCCCTCCCGAGGCGGCTaGGACACGTGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: APVPAGPPAAGQCPLTRAPSRGG*DTCRCR
Trigger: CCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGG...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS GCA 90 bp GCGCGGCCACCGTCTCCAGCTCCCGCAGGAAGGCGTGCTGCAGGGTaGCCTCCCGAGGCGGCTTGGACACGTGCAGGTGCAGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ARPPSPAPAGRRAAG*PPEAAWTRAGAGCC
Trigger: GCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCGGGAGCTGGAGACGGTGGCCGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGCCCTCCCGAGGCGGCTaGGACACGTGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAAPSRGG*DTCRCR
Trigger: CCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGG...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGGCGGCCCGCGGCTGGTaGGTGAGCCAGTCCATCACC +
Preference number: 5 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAAAARGW*VSQSIT
Trigger: GGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGC...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS TCA 90 bp CGTAGGGCTGGCCCTGCAGGTCGTACTGCTGCATGCGGTACACGGTaGACTCGTGCGCGGCGTCGGCGGCAGGCAGCGGCGGCGCCACCA +
Preference number: 5 (lower is better)
Translates to: RRAGPAGRTAACGTR*TRARRRRQAAAAPP
Trigger: TGGTGGCGCCGCCGCTGCCTGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCCTACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000588428.5
CDS GCA 90 bp GCGTGCTGCAGGGTGCCCTCCCGAGGCGGCTTGGACACGTGCAGGTaGAGGCTGCTGCCCCGGCCCACGGTGTCCAGGCACAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: ACCRVPSRGGLDTCR*RLLPRPTVSRHSTK
Trigger: CTTCGTGCTGTGCCTGGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGCAGTCACTCACGGCCTaGCTCTGTACCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQQSLTA*LCTPLV
Trigger: CACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTG...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CAA 90 bp CCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCACAGTCACTCACGGCCTaGCTCTGTACCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PCRAARGGAVSTHSCSAPQSLTA*LCTPLV
Trigger: CACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTG...TGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS TCA 90 bp TGCTGCTGCGCTGGCCGTCACGGTGGCTCTCCAGGTGGGACAGCGTaGAGGCGGGCAGTCGGCGGATGGCGAAGCGCTCGTGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CCCAGRHGGSPGGTA*RRAVGGWRSARAPR
Trigger: CCTGGGAGCACGAGCGCTTCGCCATCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCGCAGCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS GCA 90 bp GCAGGGTGCCCTCCCGAGGCGGCTTGGACACGTGCAGGTGCAGGCTaGTGCCCCGGCCCACGGTGTCCAGGCACAGCACGAAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: AGCPPEAAWTRAGAG*CPGPRCPGTARRPH
Trigger: ATGTGGCCTTCGTGCTGTGCCTGGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGGCACCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS GCA 90 bp AACTGGTGCGCGGCCACCGTCTCCAGCTCCCGCAGGAAGGCGTGCTaGAGGGTGCCCTCCCGAGGCGGCTTGGACACGTGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: NWCAATVSSSRRKAC*RVPSRGGLDTCRCR
Trigger: CCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCGGGAGCTGGAGACGGTGGCCGCGCACCAGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGACCATCTGGAAGCCGTaGGCAGTGGCCGTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAATIWKP*AVAVRS
Trigger: GCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGT...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CAA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACACGTCCTCCGCCAGGTaGATCCGCTTGTGCACCATG +
Preference number: 5 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDTSSAR*IRLCTM
Trigger: CATGGTGCACAAGCGGATCAACCTGGCGGAGGACGT...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGAGGAAGGTGCTGTCCTaGTCCACCAGCTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: ARGGAVSTHSCSAPGTVERKVLS*STSCAA
Trigger: GGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCT...CTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCCCGCTTGTCAGCCTaGACGTGGTGCTGCTTCACG +
Preference number: 5 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCSRLSA*TWCCFT
Trigger: CGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGGA...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGATCCCGCTTGTCAGCCTaGACGTGGTGCTGCTTCACG +
Preference number: 5 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGSRLSA*TWCCFT
Trigger: CGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGGA...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACAACTCTGGGTCCCGCTaGTCAGCCTTGACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDNSGSR*SALTWC
Trigger: GCACCACGTCAAGGCTGACAAGCGGGACCCAGAGTT...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS TCA 90 bp GCGACAGCCAGGGGGCCACTCCAAAGGCGTCGTAGTGGGCCACGATaGCGATGGTGGGAAGGTCCTCTCCGCCCAGCCCCGTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: ATARGPLQRRRSGPR*RWWEGPLRPAPSAA
Trigger: GGCGGCTGACGGGGCTGGGCGGAGAGGACCTTCCCACCATCGTCATCGTGGCCCACTACGACGCCTTTGGAGTGGCCCCCTGGCTGTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000588428.5
ENST00000590671.5
CDS-3UTR CAA 90 bp AACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTCCCTCCCGAGGCGGCTaGGACACGTGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: NTSLGHGRETAAGARPGLPSRGG*DTCRCR
Trigger: CCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGG...AAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp GGCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCGCCAGGTTGATCCGCTaGTGCACCATGGAGAACCGT +
Preference number: 5 (lower is better)
Translates to: GPCPCRAARGGAVSTHSCARLIR*CTMENR
Trigger: ACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGC...GCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GCCCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTACGTCCTCCGCCAGGTaGATCCGCTTGTGCACCATG +
Preference number: 5 (lower is better)
Translates to: APVPAGPPAAGQCPLTRATSSAR*IRLCTM
Trigger: CATGGTGCACAAGCGGATCAACCTGGCGGAGGACGT...AGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GAGGCCGCGCGCGATCGGGCAGGGGGTCCCGGCGTCTCCTCTTTAATCGTGCATGCGGCCCGCGGCTGGTaGGTGAGCCAGTCCATCACC +
Preference number: 5 (lower is better)
Translates to: EAARDRAGGPGVSSLIVHAARGW*VSQSIT
Trigger: GGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGC...ATGCACGATTAAAGAGGAGACGCCGGGACCCCCTGCCCGATCGCGCGCGGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp GGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGCTGTGTCACTGTGTCTaGGCCTTCACGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GPPAAGQCPLTRARPQGLLCHCV*AFTSSL
Trigger: GAGGCTGCTCGTGAAGGCCAAGACACAGTGACACAG...CAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS GCA 90 bp TGGGACAGCGTGAAGGCGGGCAGTCGGCGGATGGCGAAGCGCTCGTaGTCCCAGGCCAGCACGTCCTCCGCCAGGTTGATCCGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: WDSVKAGSRRMAKRS*SQASTSSARLIRLC
Trigger: GCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGAGCGCTTCGCCATCCGCCGACTGCCCGCCTTCACGCTGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS CCA 90 bp AGAAGAGGCGTGCCAGCTCCAGCAGCACAGAGACGCCGCTCCCGTTaGAGTCCGCGCCCAGCGACAGCCAGGGGGCCACTCCAAAGGCGT +
Preference number: 5 (lower is better)
Translates to: RRGVPAPAAQRRRSR*SPRPATARGPLQRR
Trigger: ACGCCTTTGGAGTGGCCCCCTGGCTGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCTCTGTGCTGCTGGAGCTGGCACGCCTCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
CDS CCA 90 bp ACGTCCATGATGCTGCTGCGCTGGCCGTCACGGTGGCTCTCCAGGTaGGACAGCGTGAAGGCGGGCAGTCGGCGGATGGCGAAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: TSMMLLRWPSRWLSR*DSVKAGSRRMAKRS
Trigger: CGAGCGCTTCGCCATCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCATGGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGAGACGCCGCTCCCGTaGGAGTCCGCGCCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSETPLP*ESAPSD
Trigger: GTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCTC...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000587740.5
CDS-3UTR CAA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCTCTGTGTGGTCCAGGTaGTCTTCCAGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGSVWSR*SSSQRL
Trigger: CAAGCGCTGGCTGGAAGACAACCTGGACCACACAGA...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CCCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGTCTGTGTGGTCCAGGTaGTCTTCCAGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: PCPCRAARGGAVSTHSCSSVWSR*SSSQRL
Trigger: CAAGCGCTGGCTGGAAGACAACCTGGACCACACAGA...CGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp TGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCTGTGTCACTGTGTCTaGGCCTTCACGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CPCRAARGGAVSTHSCSALCHCV*AFTSSL
Trigger: GAGGCTGCTCGTGAAGGCCAAGACACAGTGACACAG...GGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CAA 90 bp CTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCGGACAGGACGTGACCTaGCGACCTGGAAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LSLQGRPRRGSVHSLVLGGQDVT*RPGRKL
Trigger: CAACTTCCTTCCAGGTCGCAAGGTCACGTCCTGTCC...GCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS-3UTR CAA 90 bp CCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGTTCTTAACCTTGTCTTaGGCGTTGGGGGAGCTAGGG +
Preference number: 5 (lower is better)
Translates to: PAGPPAAGQCPLTRARPQFLTLS*ALGELG
Trigger: CCCTAGCTCCCCCAACGCCAAAGACAAGGTTAAGAA...CTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS CCA 90 bp GTCTTAGAATCCACCCGGGACCGCACGTCCATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCCAGGTGGGACAGCGTGAAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: VLESTRDRTSMMLLR*PSRWLSRWDSVKAG
Trigger: GCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCATGGACGTGCGGTCCCGGGTGGATTCTAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGTCAAAGACGGCCGGCTaGACTCTGTACGCATTCATC +
Preference number: 5 (lower is better)
Translates to: PVPAGPPAAGQCPLTRARSKTAG*TLYAFI
Trigger: GATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTGA...CCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CAA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGTCAAAGACGGCCGGCTaGACTCTGTACGCATTCATC +
Preference number: 5 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWSKTAG*TLYAFI
Trigger: GATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTGA...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CAA 90 bp AACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTGTGCCAGGCCAGGACTaGCCCAGCTCAAGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: NTSLGHGRETAAGARPGLVPGQD*PSSSPF
Trigger: GAAGGGACTTGAGCTGGGCAAGTCCTGGCCTGGCAC...AAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp CGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCGTGCCAGGCCAGGACTaGCCCAGCTCAAGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: RPAASHTSLSPRRSVSASVPGQD*PSSSPF
Trigger: GAAGGGACTTGAGCTGGGCAAGTCCTGGCCTGGCAC...GGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS TCA 90 bp AGGTGCTGTCCTTGTCCACCAGCTGCGCGGCCCGCGGCTGGTTGGTaGGCCAGTCCATCACCGAGTCCAGCTGCTCCTGCTGGATCTGCA +
Preference number: 5 (lower is better)
Translates to: RCCPCPPAARPAAGW*ASPSPSPAAPAGSA
Trigger: TGCAGATCCAGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCAGCTGGTGGACAAGGACAGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000590671.5
CDS GCA 90 bp TCGTGCTCCCAGGCCAGCACGTCCTCCGCCAGGTTGATCCGCTTGTaGACCATGGAGAACCGTACCTCAGGGAACTGGTGCGCGGCCACC +
Preference number: 5 (lower is better)
Translates to: SCSQASTSSARLIRL*TMENRTSGNWCAAT
Trigger: GGTGGCCGCGCACCAGTTCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGCCCTCCCGAGGCGGCTaGGACACGTGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: QPEPQTVSQCIHHDDSCSPSRGG*DTCRCR
Trigger: CCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGG...CGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CAA 90 bp CAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCGGCCCGCGGCTGGTaGGTGAGCCAGTCCATCACC +
Preference number: 5 (lower is better)
Translates to: QPEPQTVSQCIHHDDSCSAARGW*VSQSIT
Trigger: GGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGC...CGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CAA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTGCGGCCCGCGGCTGGTaGGTGAGCCAGTCCATCACC +
Preference number: 5 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSAARGW*VSQSIT
Trigger: GGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGC...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp TCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTAGGAAGGTGCTGTCCTaGTCCACCAGCTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: SHRPAASHTSLSPRRSVSRKVLS*STSCAA
Trigger: GGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCT...ACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGAGTACGCATTCATCACTaGCTTCAGCTGGTCGTAGAA +
Preference number: 5 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGVRIHH*LQLVVE
Trigger: TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTAC...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CAA 90 bp CAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACGTACGCATTCATCACTaGCTTCAGCTGGTCGTAGAA +
Preference number: 5 (lower is better)
Translates to: QGRPRRGSVHSLVLGPRDVRIHH*LQLVVE
Trigger: TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTAC...GTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CAA 90 bp TCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCACGTCCTCCGCCAGGTaGATCCGCTTGTGCACCATG +
Preference number: 5 (lower is better)
Translates to: SAGCIPHQPEPQTVSQCITSSAR*IRLCTM
Trigger: CATGGTGCACAAGCGGATCAACCTGGCGGAGGACGT...GATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp TCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCAACTCTGGGTCCCGCTaGTCAGCCTTGACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: SAGCIPHQPEPQTVSQCINSGSR*SALTWC
Trigger: GCACCACGTCAAGGCTGACAAGCGGGACCCAGAGTT...GATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGGTACGCATTCATCACTaGCTTCAGCTGGTCGTAGAA +
Preference number: 5 (lower is better)
Translates to: PPAAGQCPLTRARPQGLWVRIHH*LQLVVE
Trigger: TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTAC...CCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CAA 90 bp CCTGTCCCTGCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGGTACGCATTCATCACTaGCTTCAGCTGGTCGTAGAA +
Preference number: 5 (lower is better)
Translates to: PVPAGPPAAGQCPLTRARVRIHH*LQLVVE
Trigger: TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTAC...CCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592235.1
ENST00000592737.5
CDS-3UTR CAA 90 bp GCAGGGCCGCCCGCGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGAGTTCGGCTAATACCGTaGAGGTTTCACATAAACTCC +
Preference number: 5 (lower is better)
Translates to: AGPPAAGQCPLTRARPQGVRLIP*RFHINS
Trigger: GGAGTTTATGTGAAACCTCAACGGTATTAGCCGAAC...TCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCGCGGGCGGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS TCA 90 bp TGGCGAAGCGCTCGTGCTCCCAGGCCAGCACGTCCTCCGCCAGGTTaGTCCGCTTGTGCACCATGGAGAACCGTACCTCAGGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: WRSARAPRPARPPPG*SACAPWRTVPQGTG
Trigger: ACCAGTTCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGAGCGCTTCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATACCATCTGGAAGCCGTaGGCAGTGGCCGTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHTIWKP*AVAVRS
Trigger: GCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGT...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS-3UTR CAA 90 bp CGGCGGGGCAGTGTCCACTCACTCGTGCTCGGCCCCAGGGACTGTGGAGCGGCGATCACTTTCTTAACCTaGTCTTTGGCGTTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: RRGSVHSLVLGPRDCGAAITFLT*SLALGE
Trigger: CTCCCCCAACGCCAAAGACAAGGTTAAGAAAGTGAT...CGCCGCTCCACAGTCCCTGGGGCCGAGCACGAGTGAGTGGACACTGCCCCGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS TCA 90 bp TGGCAATCAGCCAGTCACTCACGGCCTTGCTCTGTACCCCGCTGGTaGCCATCTGGAAGCCGTTGGCAGTGGCCGTGCGCAGCAGTACGT +
Preference number: 5 (lower is better)
Translates to: WQSASHSRPCSVPRW*PSGSRWQWPCAAVR
Trigger: ACGTACTGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTGGCTGATTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588428.5
CDS CCA 90 bp AGCCAGTCACTCACGGCCTTGCTCTGTACCCCGCTGGTGACCATCTaGAAGCCGTTGGCAGTGGCCGTGCGCAGCAGTACTTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SQSLTALLCTPLVTI*KPLAVAVRSSTSAA
Trigger: TGCTGCTGAAGTACTGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CAA 90 bp GTCAGGGCCTCTGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCCCTCCCGAGGCGGCTaGGACACGTGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VRASAMILVLRVRVLESTPSRGG*DTCRCR
Trigger: CCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGG...GGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAGGCCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTAACTCTGGGTCCCGCTaGTCAGCCTTGACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPNSGSR*SALTWC
Trigger: GCACCACGTCAAGGCTGACAAGCGGGACCCAGAGTT...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp AACACCTCCCTGGGCCACGGAAGGGAGACGGCTGCGGGTGCCAGGCCAGGACTTTCAAAGACGGCCGGCTaGACTCTGTACGCATTCATC +
Preference number: 5 (lower is better)
Translates to: NTSLGHGRETAAGARPGLSKTAG*TLYAFI
Trigger: GATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTGA...AAGTCCTGGCCTGGCACCCGCAGCCGTCTCCCTTCCGTGGCCCAGGGAGGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp CCTGGATGGCCTGGGGGCCCAGTACCGAGCCCAGGAAACACCAGGCACTGGCTCTCAAAGACGGCCGGCTaGACTCTGTACGCATTCATC +
Preference number: 5 (lower is better)
Translates to: PGWPGGPVPSPGNTRHWLSKTAG*TLYAFI
Trigger: GATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTGA...GAGCCAGTGCCTGGTGTTTCCTGGGCTCGGTACTGGGCCCCCAGGCCATCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS TCA 90 bp TGGCAATCAGCCAGTCACTCACGGCCTTGCTCTGTACCCCGCTGGTaGCCATCTGGAAGCCGTTGGCAGTGGCCGTGCGCAGCAGTACTT +
Preference number: 5 (lower is better)
Translates to: WQSASHSRPCSVPRW*PSGSRWQWPCAAVL
Trigger: AAGTACTGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTGGCTGATTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS-3UTR CAA 90 bp CCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGAGCCAGGTTGATCCGCTaGTGCACCATGGAGAACCGT +
Preference number: 5 (lower is better)
Translates to: PRRSVSASIMTTRARPQGARLIR*CTMENR
Trigger: ACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGC...TCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CAA 90 bp CTCTGTAATTCAGTGTTCCAACCACCGCCGGGGAGGGAGAGGGCCCCTGTCCCTGCCAGGTTGATCCGCTaGTGCACCATGGAGAACCGT +
Preference number: 5 (lower is better)
Translates to: LCNSVFQPPPGRERAPVPARLIR*CTMENR
Trigger: ACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGC...AGGGACAGGGGCCCTCTCCCTCCCCGGCGGTGGTTGGAACACTGAATTACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000590671.5
ENST00000592737.5
CDS-3UTR CAA 90 bp AAGTCCGTAGCCTGGCCCCGGGACGTCTCCCAAGCTCTCCTCCAAGGAAGTTCAACGTCCTCCGCCAGGTaGATCCGCTTGTGCACCATG +
Preference number: 5 (lower is better)
Translates to: KSVAWPRDVSQALLQGSSTSSAR*IRLCTM
Trigger: CATGGTGCACAAGCGGATCAACCTGGCGGAGGACGT...TGAACTTCCTTGGAGGAGAGCTTGGGAGACGTCCCGGGGCCAGGCTACGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp CCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGGACCTTCACGATTCAAAGCGGCCCGCGGCTGGTaGGTGAGCCAGTCCATCACC +
Preference number: 5 (lower is better)
Translates to: PRVTGQGLRIHPGPSRFKAARGW*VSQSIT
Trigger: GGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGC...TTTGAATCGTGAAGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp ATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTTCCCGCTTGTCAGCCTaGACGTGGTGCTGCTTCACG +
Preference number: 5 (lower is better)
Translates to: IFSSAGCIPHQPEPQTVSSRLSA*TWCCFT
Trigger: CGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGGA...ACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCTGTGTCACTGTGTCTaGGCCTTCACGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PEPQTVSQCIHHDDSCSALCHCV*AFTSSL
Trigger: GAGGCTGCTCGTGAAGGCCAAGACACAGTGACACAG...GGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCGTCTGGGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CAA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCAGGAAGGTGCTGTCCTaGTCCACCAGCTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPRKVLS*STSCAA
Trigger: GGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCT...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CACGTAGGCCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAATCCCGCTTGTCAGCCTaGACGTGGTGCTGCTTCACG +
Preference number: 5 (lower is better)
Translates to: HVGHAEVGSNANSQEQVKSRLSA*TWCCFT
Trigger: CGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGGA...TTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGGCCTACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp TCTTTAATCGTGCATGTGTGCTTACACCAGACCGAGGGCGGCCGGCTCCCAGGAAGTGGTGATGGGCCCTaGGGCAAGTCTCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SLIVHVCLHQTEGGRLPGSGDGP*GKSLEE
Trigger: CTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACT...TCCTGGGAGCCGGCCGCCCTCGGTCTGGTGTAAGCACACATGCACGATTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp ATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCTCTGTCAGGACGTCCTCCGCCAGGTaGATCCGCTTGTGCACCATG +
Preference number: 5 (lower is better)
Translates to: IICSVNTGMSGGVPFSVRTSSAR*IRLCTM
Trigger: CATGGTGCACAAGCGGATCAACCTGGCGGAGGACGT...CCTGACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp TGCAATGATCCTCGTGTTACGGGTCAGGGTCTTAGAATCCACCCGGGACCTTCAAGGAAGGTGCTGTCCTaGTCCACCAGCTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: CNDPRVTGQGLRIHPGPSRKVLS*STSCAA
Trigger: GGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCT...TGAAGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp TATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCCAGAACTCTGGGTCCCGCTaGTCAGCCTTGACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: YGFIFSSAGCIPHQPEPQNSGSR*SALTWC
Trigger: GCACCACGTCAAGGCTGACAAGCGGGACCCAGAGTT...CTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CCATGCCGAGGTAGGCAGCAATGCCAACAGCCAGGAGCAGGTCAAAGACGGCCGTCAAAGACGGCCGGCTaGACTCTGTACGCATTCATC +
Preference number: 5 (lower is better)
Translates to: PCRGRQQCQQPGAGQRRPSKTAG*TLYAFI
Trigger: GATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTGA...CGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp TCTCCTTCCCAGCAAACGTTCTCACCTGACGCCCCCACCCCGAACACATCCTTTTCTGTGTGGTCCAGGTaGTCTTCCAGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: SPSQQTFSPDAPTPNTSFSVWSR*SSSQRL
Trigger: CAAGCGCTGGCTGGAAGACAACCTGGACCACACAGA...AAAGGATGTGTTCGGGGTGGGGGCGTCAGGTGAGAACGTTTGCTGGGAAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp TGCTGGATCATCTGCTCTGTGAACACCGGCATGTCTGGGGGTGTCCCCTTCTCTGCCAGGTTGATCCGCTaGTGCACCATGGAGAACCGT +
Preference number: 5 (lower is better)
Translates to: CWIICSVNTGMSGGVPFSARLIR*CTMENR
Trigger: ACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGC...AGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGCAGATGATCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCAGGAAGGTGCTGTCCTaGTCCACCAGCTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: FNMALFSHRPAASHTSLSRKVLS*STSCAA
Trigger: GGCCGCGCAGCTGGTGGACAAGGACAGCACCTTCCT...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp CAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCCTCCCGCTTGTCAGCCTaGACGTGGTGCTGCTTCACG +
Preference number: 5 (lower is better)
Translates to: QYGFIFSSAGCIPHQPEPSRLSA*TWCCFT
Trigger: CGTGAAGCAGCACCACGTCAAGGCTGACAAGCGGGA...GGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GGCTGCATCCCACACCAGCCTGAGCCCCAGACGGTCAGTCAGTGCATCCATCATTCAAAGACGGCCGGCTaGACTCTGTACGCATTCATC +
Preference number: 5 (lower is better)
Translates to: GCIPHQPEPQTVSQCIHHSKTAG*TLYAFI
Trigger: GATGAATGCGTACAGAGTCAAGCCGGCCGTCTTTGA...ATGATGGATGCACTGACTGACCGTCTGGGGCTCAGGCTGGTGTGGGATGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GTCCCTTCCCCACCAAGCCTGCTCGGCACGCACTGGGTAGGTTATATTGCTAAAAGTGGTGATGGGCCCTaGGGCAAGTCTCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VPSPPSLLGTHWVGYIAKSGDGP*GKSLEE
Trigger: CTCCTCCAGAGACTTGCCCAAGGGCCCATCACCACT...TTTAGCAATATAACCTACCCAGTGCGTGCCGAGCAGGCTTGGTGGGGAAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000592737.5
CDS-3UTR CAA 90 bp CGGTCAGTCAGTGCATCCATCATGACGACTCGTGCTCGGCCCCAGGGACTGTGGGTACGCATTCATCACTaGCTTCAGCTGGTCGTAGAA +
Preference number: 5 (lower is better)
Translates to: RSVSASIMTTRARPQGLWVRIHH*LQLVVE
Trigger: TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTAC...CCACAGTCCCTGGGGCCGAGCACGAGTCGTCATGATGGATGCACTGACTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587740.5
CDS-3UTR CAA 90 bp TCATCACTTGCTTCAGCTGGTCGTAGAAGACAAACTCTGGGTCCCGCTTGTCAGAACTCTGGGTCCCGCTaGTCAGCCTTGACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: SSLASAGRRRQTLGPACQNSGSR*SALTWC
Trigger: GCACCACGTCAAGGCTGACAAGCGGGACCCAGAGTT...CTGACAAGCGGGACCCAGAGTTTGTCTTCTACGACCAGCTGAAGCAAGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS-3UTR CAA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCTCTGTGTGGTCCAGGTaGTCTTCCAGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: FNMALFSHRPAASHTSLSSVWSR*SSSQRL
Trigger: CAAGCGCTGGCTGGAAGACAACCTGGACCACACAGA...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp TTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCTGAGCCTGTGTCACTGTGTCTaGGCCTTCACGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FNMALFSHRPAASHTSLSLCHCV*AFTSSL
Trigger: GAGGCTGCTCGTGAAGGCCAAGACACAGTGACACAG...GCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp GATCATTCAATATGGCTTTATTTTCTCATCGGCCGGCTGCATCCCACACCAGCCGCCAGGTTGATCCGCTaGTGCACCATGGAGAACCGT +
Preference number: 5 (lower is better)
Translates to: DHSIWLYFLIGRLHPTPAARLIR*CTMENR
Trigger: ACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGC...GGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAGCCATATTGAATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000592737.5
CDS-3UTR CAA 90 bp TGTACGCATTCATCACTTGCTTCAGCTGGTCGTAGAAGACAAACTCTGGGTCCCGTACGCATTCATCACTaGCTTCAGCTGGTCGTAGAA +
Preference number: 5 (lower is better)
Translates to: CTHSSLASAGRRRQTLGPVRIHH*LQLVVE
Trigger: TTCTACGACCAGCTGAAGCAAGTGATGAATGCGTAC...GGGACCCAGAGTTTGTCTTCTACGACCAGCTGAAGCAAGTGATGAATGCGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS GCA 72 bp GCGGCCACCGTCTCCAGCTCCCGCAGGAAGGCGTGCTaGAGGGTGCCCTCCCGAGGCGGCTTGGACACGTGC +
Preference number: 6 (lower is better)
Translates to: AATVSSSRRKAC*RVPSRGGLDTC
Trigger: GCACGTGTCCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCGGGAGCTGGAGACGGTGGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS GCA 72 bp TGTGGGCACCGCGGCGAACCGCCCCGCCAGCCGCGCTaGCTGTCGGGAATTGTAGTCCGTCCGTCCGGCGCT +
Preference number: 6 (lower is better)
Translates to: CGHRGEPPRQPR*LSGIVVRPSGA
Trigger: AGCGCCGGACGGACGGACTACAATTCCCGACAGGCAGCGCGGCTGGCGGGGCGGTTCGCCGCGGTGCCCACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS CAA 90 bp AGCTCCCGCAGGAAGGCGTGCTGCAGGGTGCCCTCCCGAGGCGGCTaGGACACGTGCAGGTGCAGGCTGCTGCCCCGGCCCACGGTGTCC +
Preference number: 6 (lower is better)
Translates to: SSRRKACCRVPSRGG*DTCRCRLLPRPTVS
Trigger: GGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCGGGAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS TCA 72 bp GGCCCTGCAGGTCGTACTGCTGCATGCGGTACACGGTaGACTCGTGCGCGGCGTCGGCGGCAGGCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: GPAGRTAACGTR*TRARRRRQAAA
Trigger: CGCCGCTGCCTGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000588428.5
CDS CCA 72 bp GTGCCAGCTCCAGCAGCACAGAGACGCCGCTCCCGTTaGAGTCCGCGCCCAGCGACAGCCAGGGGGCCACTC +
Preference number: 6 (lower is better)
Translates to: VPAPAAQRRRSR*SPRPATARGPL
Trigger: GAGTGGCCCCCTGGCTGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCTCTGTGCTGCTGGAGCTGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
CDS CAA 72 bp CGTGCCAGCTCCAGCAGCACAGAGACGCCGCTCCCGTaGGAGTCCGCGCCCAGCGACAGCCAGGGGGCCACT +
Preference number: 6 (lower is better)
Translates to: RASSSSTETPLP*ESAPSDSQGAT
Trigger: AGTGGCCCCCTGGCTGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCTCTGTGCTGCTGGAGCTGGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
CDS GCA 72 bp CCGTCTCCAGCTCCCGCAGGAAGGCGTGCTGCAGGGTaGCCTCCCGAGGCGGCTTGGACACGTGCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: PSPAPAGRRAAG*PPEAAWTRAGA
Trigger: TGCACCTGCACGTGTCCAAGCCGCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCGGGAGCTGGAGACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS GCA 72 bp CTCCGCCGCCATCGTGCGCGCCTCCGTGTTCAGCACTaGATTCCGTGTGCCTCGGCATGGGTAGCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: LRRHRARLRVQH*IPCASAWVAAG
Trigger: CCCGGCGGCTACCCATGCCGAGGCACACGGAATGCAGTGCTGAACACGGAGGCGCGCACGATGGCGGCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590671.5
CDS CCA 72 bp ATGCTGCTGCGCTGGCCGTCACGGTGGCTCTCCAGGTaGGACAGCGTGAAGGCGGGCAGTCGGCGGATGGCG +
Preference number: 6 (lower is better)
Translates to: MLLRWPSRWLSR*DSVKAGSRRMA
Trigger: CGCCATCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCGCAGCAGCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS CAA 90 bp GAGAAGAGGCGTGCCAGCTCCAGCAGCACAGAGACGCCGCTCCCGTaGGAGTCCGCGCCCAGCGACAGCCAGGGGGCCACTCCAAAGGCG +
Preference number: 6 (lower is better)
Translates to: EKRRASSSSTETPLP*ESAPSDSQGATPKA
Trigger: CGCCTTTGGAGTGGCCCCCTGGCTGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCTCTGTGCTGCTGGAGCTGGCACGCCTCTTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
CDS GCA 72 bp CTCCGCCGCCATCGTGCGCGCCTCCGTGTTCAGCACTaGATTCCGTGTGCCGTAGGGCTGGCCCTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LRRHRARLRVQH*IPCAVGLALQV
Trigger: GACCTGCAGGGCCAGCCCTACGGCACACGGAATGCAGTGCTGAACACGGAGGCGCGCACGATGGCGGCGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246117.9
CDS CCA 72 bp TCCACCCGGGACCGCACGTCCATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCCAGGTGGGACAGCGTG +
Preference number: 6 (lower is better)
Translates to: STRDRTSMMLLR*PSRWLSRWDSV
Trigger: CACGCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCATGGACGTGCGGTCCCGGGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS CCA 72 bp GGGACTGTGGAGCGGCGGGGGCTCCGGCTGTGGGGGTaGCTGTGTCACTGTGTCTTGGCCTTCACGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GTVERRGLRLWG*LCHCVLAFTSS
Trigger: GCTGCTCGTGAAGGCCAAGACACAGTGACACAGCCACCCCCACAGCCGGAGCCCCCGCCGCTCCACAGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000587740.5
ENST00000590671.5
ENST00000591062.1
ENST00000592235.1
ENST00000592737.5
CDS TCA 72 bp AGGGGGCCACTCCAAAGGCGTCGTAGTGGGCCACGATaGCGATGGTGGGAAGGTCCTCTCCGCCCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: RGPLQRRRSGPR*RWWEGPLRPAP
Trigger: CGGGGCTGGGCGGAGAGGACCTTCCCACCATCGTCATCGTGGCCCACTACGACGCCTTTGGAGTGGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000588428.5
ENST00000590671.5
CDS CAA 90 bp CGCTCGTGCTCCCAGGCCAGCACGTCCTCCGCCAGGTTGATCCGCTaGTGCACCATGGAGAACCGTACCTCAGGGAACTGGTGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: RSCSQASTSSARLIR*CTMENRTSGNWCAA
Trigger: GGCCGCGCACCAGTTCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS TCA 72 bp GCCAGTCACTCACGGCCTTGCTCTGTACCCCGCTGGTaGCCATCTGGAAGCCGTTGGCAGTGGCCGTGCGCA +
Preference number: 6 (lower is better)
Translates to: ASHSRPCSVPRW*PSGSRWQWPCA
Trigger: TGCGCACGGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000588428.5
ENST00000590671.5
CDS CCA 72 bp CTCACGGCCTTGCTCTGTACCCCGCTGGTGACCATCTaGAAGCCGTTGGCAGTGGCCGTGCGCAGCAGTACG +
Preference number: 6 (lower is better)
Translates to: LTALLCTPLVTI*KPLAVAVRSST
Trigger: CGTACTGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588428.5
CDS CCA 72 bp GTGAGACTCTGTCGCACGTCCATGATGCTGCTGCGCTaGCCGTCACGGTGGCTCTCCAGGTGGGACAGCGTG +
Preference number: 6 (lower is better)
Translates to: VRLCRTSMMLLR*PSRWLSRWDSV
Trigger: CACGCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCGCAGCAGCATCATGGACGTGCGACAGAGTCTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586904.1
CDS CAA 90 bp CTCACGGCCTTGCTCTGTACCCCGCTGGTGACCATCTGGAAGCCGTaGGCAGTGGCCGTGCGCAGCAGTACTTCAGCAGCAGAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LTALLCTPLVTIWKP*AVAVRSSTSAAEAE
Trigger: CTCCGCCTCTGCTGCTGAAGTACTGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS TCA 72 bp GCTCGTGCTCCCAGGCCAGCACGTCCTCCGCCAGGTTaGTCCGCTTGTGCACCATGGAGAACCGTACCTCAG +
Preference number: 6 (lower is better)
Translates to: ARAPRPARPPPG*SACAPWRTVPQ
Trigger: CTGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS CCA 72 bp CTCACGGCCTTGCTCTGTACCCCGCTGGTGACCATCTaGAAGCCGTTGGCAGTGGCCGTGCGCAGCAGTACT +
Preference number: 6 (lower is better)
Translates to: LTALLCTPLVTI*KPLAVAVRSST
Trigger: AGTACTGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246117.9
ENST00000590671.5
CDS CAA 72 bp CCCTCCACGCTGGCAATCAGCCAGTCACTCACGGCCTaGCTCTGTACCCCGCTGGTGACCATCTGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: PSTLAISQSLTA*LCTPLVTIWKP
Trigger: CGGCTTCCAGATGGTCACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTGGCTGATTGCCAGCGTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246117.9
ENST00000588428.5
ENST00000590671.5
CDS CAA 72 bp CGCTCGTGCTCCCAGGCCAGCACGTCCTCCGCCAGGTaGATCCGCTTGTGCACCATGGAGAACCGTACCTCA +
Preference number: 6 (lower is better)
Translates to: RSCSQASTSSAR*IRLCTMENRTS
Trigger: TGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS CAA 90 bp ATGGCGAAGCGCTCGTGCTCCCAGGCCAGCACGTCCTCCGCCAGGTaGATCCGCTTGTGCACCATGGAGAACCGTACCTCAGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: MAKRSCSQASTSSAR*IRLCTMENRTSGNW
Trigger: CCAGTTCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGAGCGCTTCGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS GCA 72 bp CAGGCCAGCACGTCCTCCGCCAGGTTGATCCGCTTGTaGACCATGGAGAACCGTACCTCAGGGAACTGGTGC +
Preference number: 6 (lower is better)
Translates to: QASTSSARLIRL*TMENRTSGNWC
Trigger: GCACCAGTTCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246117.9
ENST00000586904.1
ENST00000587740.5
ENST00000588428.5
ENST00000590671.5
ENST00000592737.5
CDS CCA 72 bp TTTGGCGTTGGGGGAGCTAGGGTGAGGGGCGAAAGGTaGGGACAGGACGTGACCTTGCGACCTGGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: FGVGGARVRGER*GQDVTLRPGRK
Trigger: CTTCCTTCCAGGTCGCAAGGTCACGTCCTGTCCCCACCTTTCGCCCCTCACCCTAGCTCCCCCAACGCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590671.5