RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000100365

Ensembl transcript IDs: ENST00000248899.11, ENST00000397147.7, ENST00000415063.2, ENST00000447071.5, ENST00000614157.1, ENST00000625504.2, ENST00000626011.2, ENST00000628938.2, ENST00000630049.1, ENST00000650698.1, ENST00000650827.1, ENST00000651053.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTTCCAGGGGAAGAGGCGCTTCTGGGAGGGGAGGCCACGAGCCTaGCGCACCATGAGCGCTACGTCCTCATCCGACAGCAGCCGAACC +
Preference number: 1 (lower is better)
Translates to: SFQGKRRFWEGRPRA*RTMSATSSSDSSRT
Trigger: GGTTCGGCTGCTGTCGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCCCTGGAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR CCA 90 bp TTGTCCTTCTGCGTGATGTGCAGCTTCCAGGGGAAGAGGCGCTTCTaGGAGGGGAGGCCACGAGCCTGCCGCACCATGAGCGCTACGTCC +
Preference number: 1 (lower is better)
Translates to: LSFCVMCSFQGKRRF*EGRPRACRTMSATS
Trigger: GGACGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCCCTGGAAGCTGCACATCACGCAGAAGGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR TCA 90 bp CAGCTCATGGCATCGTGTTGTAGACCCTGTAGTTGTCCTTCTGCGTaGTGTGCAGCTTCCAGGGGAAGAGGCGCTTCTGGGAGGGGAGGC +
Preference number: 1 (lower is better)
Translates to: QLMASCCRPCSCPSA*CAASRGRGASGRGG
Trigger: GCCTCCCCTCCCAGAAGCGCCTCTTCCCCTGGAAGCTGCACATCACGCAGAAGGACAACTACAGGGTCTACAACACGATGCCATGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR CCA 90 bp TTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACACCGTCAGCTCATaGCATCGTGTTGTAGACCCTGTAGTTGTCCTTCTGCGTGATGTG +
Preference number: 1 (lower is better)
Translates to: FLLVSPHCSRDTVSS*HRVVDPVVVLLRDV
Trigger: CACATCACGCAGAAGGACAACTACAGGGTCTACAACACGATGCCATGAGCTGACGGTGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR-3UTR CCA 90 bp GGGAAGAGGCGCTTCTGGGAGGGGAGGCCACGAGCCTGCCGCACCATGAGCGCTCCTCCCAGGTTTTCCTaGTCCCAATCTCCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: GKRRFWEGRPRACRTMSAPPRFS*SQSPLR
Trigger: TCTCAGAGGAGATTGGGACCAGGAAAACCTGGGAGG...AGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR-3UTR TCA 90 bp CACTGCTCCAGGGACACCGTCAGCTCATGGCATCGTGTTGTAGACCCTGTAGTTGAGCCTGCCGCACCATaGGCGCTACGTCCTCATCCG +
Preference number: 2 (lower is better)
Translates to: HCSRDTVSSWHRVVDPVVEPAAP*ALRPHP
Trigger: CGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTC...AACTACAGGGTCTACAACACGATGCCATGAGCTGACGGTGTCCCTGGAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR-3UTR GCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCTGGTGTCCCCTCACTaGTCCAGGGACACCGTCAGC +
Preference number: 2 (lower is better)
Translates to: ETDYKPHGSISLKDRKSALVSPH*SRDTVS
Trigger: GCTGACGGTGTCCCTGGAGCAGTGAGGGGACACCAG...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR GCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCTGGTGTCCCCTCACTaGTCCAGGGACACCGTCAGC +
Preference number: 2 (lower is better)
Translates to: KRQITSPTGPLASKTGSLLVSPH*SRDTVS
Trigger: GCTGACGGTGTCCCTGGAGCAGTGAGGGGACACCAG...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCGCTGAAGGTTTTTGCTaGTGTCCCCTCACTGCTCCA +
Preference number: 2 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPAEGFC*CPLTAP
Trigger: TGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGC...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR CCA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCCCTCCCAGGTTTTCCTaGTCCCAATCTCCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: RQITSPTGPLASKTGSLPPPRFS*SQSPLR
Trigger: TCTCAGAGGAGATTGGGACCAGGAAAACCTGGGAGG...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR GCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCACTGGTGTCCCCTCACTaGTCCAGGGACACCGTCAGC +
Preference number: 2 (lower is better)
Translates to: DVNSRKRQITSPTGPLASLVSPH*SRDTVS
Trigger: GCTGACGGTGTCCCTGGAGCAGTGAGGGGACACCAG...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR GCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGCTGGTGTCCCCTCACTaGTCCAGGGACACCGTCAGC +
Preference number: 2 (lower is better)
Translates to: VNSRKRQITSPTGPLASKLVSPH*SRDTVS
Trigger: GCTGACGGTGTCCCTGGAGCAGTGAGGGGACACCAG...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR TCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGGTCCCAATCTCCTCTaGGAGCTGAAGGTTTTTGCT +
Preference number: 2 (lower is better)
Translates to: KRQITSPTGPLASKTGSLGPNLL*ELKVFA
Trigger: AGCAAAAACCTTCAGCTCTCAGAGGAGATTGGGACC...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR CCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAGCTGAAGGTTTTTGCTaGTGTCCCCTCACTGCTCCA +
Preference number: 2 (lower is better)
Translates to: SRKRQITSPTGPLASKTGAEGFC*CPLTAP
Trigger: TGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGC...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR TCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAGGTCCCAATCTCCTCTaGGAGCTGAAGGTTTTTGCT +
Preference number: 2 (lower is better)
Translates to: SRKRQITSPTGPLASKTGGPNLL*ELKVFA
Trigger: AGCAAAAACCTTCAGCTCTCAGAGGAGATTGGGACC...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR GCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGAGCTGAAGGTTTTTaGTGGTGTCCCCTCACTGCT +
Preference number: 2 (lower is better)
Translates to: SRKRQITSPTGPLASKTGRAEGF*WCPLTA
Trigger: AGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCT...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR-3UTR TCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGGGTCCCAATCTCCTCTaGGAGCTGAAGGTTTTTGCT +
Preference number: 2 (lower is better)
Translates to: VNSRKRQITSPTGPLASKGPNLL*ELKVFA
Trigger: AGCAAAAACCTTCAGCTCTCAGAGGAGATTGGGACC...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
3UTR GCA 72 bp GGGAAGAGGCGCTTCTGGGAGGGGAGGCCACGAGCCTaGCGCACCATGAGCGCTACGTCCTCATCCGACAGC +
Preference number: 3 (lower is better)
Translates to: GKRRFWEGRPRA*RTMSATSSSDS
Trigger: GCTGTCGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR TCA 72 bp GCTTCTGGGAGGGGAGGCCACGAGCCTGCCGCACCATaGGCGCTACGTCCTCATCCGACAGCAGCCGAACCA +
Preference number: 3 (lower is better)
Translates to: ASGRGGHEPAAP*ALRPHPTAAEP
Trigger: TGGTTCGGCTGCTGTCGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR CCA 72 bp TGCGTGATGTGCAGCTTCCAGGGGAAGAGGCGCTTCTaGGAGGGGAGGCCACGAGCCTGCCGCACCATGAGC +
Preference number: 3 (lower is better)
Translates to: CVMCSFQGKRRF*EGRPRACRTMS
Trigger: GCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCCCTGGAAGCTGCACATCACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
3UTR TCA 72 bp GCATCGTGTTGTAGACCCTGTAGTTGTCCTTCTGCGTaGTGTGCAGCTTCCAGGGGAAGAGGCGCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: ASCCRPCSCPSA*CAASRGRGASG
Trigger: CCCAGAAGCGCCTCTTCCCCTGGAAGCTGCACATCACGCAGAAGGACAACTACAGGGTCTACAACACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp GGGAAGAGGCGCTTCTGGGAGGGGAGGCCACGAGCCTGCCGCACCATGAGCGCTGTCCCAGGGAGCAGGTaGAGAGTCTCGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKRRFWEGRPRACRTMSAVPGSR*RVSPSQ
Trigger: CTGGCTGGGCGAGACTCTCCACCTGCTCCCTGGGAC...AGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR TCA 90 bp GAGGGGAGGCCACGAGCCTGCCGCACCATGAGCGCTACGTCCTCATCCGACAGCGAGCCTGCCGCACCATaGGCGCTACGTCCTCATCCG +
Preference number: 4 (lower is better)
Translates to: EGRPRACRTMSATSSSDSEPAAP*ALRPHP
Trigger: CGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTC...GCTGTCGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR GCA 90 bp GGGAAGAGGCGCTTCTGGGAGGGGAGGCCACGAGCCTGCCGCACCATGAGCGCTCTGGTGTCCCCTCACTaGTCCAGGGACACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GKRRFWEGRPRACRTMSALVSPH*SRDTVS
Trigger: GCTGACGGTGTCCCTGGAGCAGTGAGGGGACACCAG...AGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp GGGAAGAGGCGCTTCTGGGAGGGGAGGCCACGAGCCTGCCGCACCATGAGCGCTAGCAACGCAGCCAGTTaGTGGGGTCGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GKRRFWEGRPRACRTMSASNAAS*WGRPPQ
Trigger: CTGAGGAGGACGACCCCACCAACTGGCTGCGTTGCT...AGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR TCA 90 bp GAGGGGAGGCCACGAGCCTGCCGCACCATGAGCGCTACGTCCTCATCCGACAGCGGTAGCGGCGGTAGATaGGGTACTTGGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EGRPRACRTMSATSSSDSGSGGR*GTWILL
Trigger: AAGGAGGATCCAAGTACCTCATCTACCGCCGCTACC...GCTGTCGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR GCA 90 bp CCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTGGAGTCCCCAGGAGCTaGCTTTGGGGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PLSVPVIQSYVLSLELPPGVPRS*LWGGSG
Trigger: GCCTGAGCCTCCCCAAAGGCAGCTCCTGGGGACTCC...AGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp CCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCAGGAGAGAGGGAAGATaGCCGTGGCTCCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: PPQRPGNSELCPLSGTPARREGR*PWLPGQ
Trigger: CTGTCCGGGGAGCCACGGGCATCTTCCCTCTCTCCT...GGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCGGGAGGCCACGAGCCTaGCGCACCATGAGCGCTACG +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPGRPRA*RTMSAT
Trigger: CGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCC...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp CCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTGTCCCAGGGAGCAGGTaGAGAGTCTCGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PTAAEPDPPQRPGNSELCVPGSR*RVSPSQ
Trigger: CTGGCTGGGCGAGACTCTCCACCTGCTCCCTGGGAC...ACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCAGCCATGGTGGGCGATaGTCCCAGGGAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PPQRPGNSELCPLSGTPASHGGR*SQGAGG
Trigger: TCCACCTGCTCCCTGGGACCATCGCCCACCATGGCT...GGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp ACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTGCTGGGCCACAGCCATaGTGGGCGATGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TAAEPDPPQRPGNSELCPAGPQP*WAMVPG
Trigger: CCCTGGGACCATCGCCCACCATGGCTGTGGCCCAGC...AGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCAGCCGGCGGAGTGCCTaGGGCACCTGCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RQQPNQIPLSVPVIQSYVSRRSA*GTCSES
Trigger: TGACTCAGAGCAGGTGCCCCAGGCACTCCGCCGGCT...GACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CATCCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTAGAGGGAAGATGCCCGTaGCTCCCCGGACAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HPTAAEPDPPQRPGNSELEGRCP*LPGQCP
Trigger: AGGGCACTGTCCGGGGAGCCACGGGCATCTTCCCTC...TAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCCCAGACCGGCAGGCTaGGCAGGCTCTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: RQQPNQIPLSVPVIQSYVPRPAG*AGSSCR
Trigger: CCTACATGAAGAGCCTGCTCAGCCTGCCGGTCTGGG...GACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CATCCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTACCCAGACCGGCAGGCTaGGCAGGCTCTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: HPTAAEPDPPQRPGNSELPRPAG*AGSSCR
Trigger: CCTACATGAAGAGCCTGCTCAGCCTGCCGGTCTGGG...TAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp ATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGGGAGTCCCCAGGAGCTaGCTTTGGGGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: IPLSVPVIQSYVLSLELPGVPRS*LWGGSG
Trigger: GCCTGAGCCTCCCCAAAGGCAGCTCCTGGGGACTCC...CGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp TCACTGCTCCAGGGACACCGTCAGCTCATGGCATCGTGTTGTAGACCCTGTAGTGGGAGGCCACGAGCCTaGCGCACCATGAGCGCTACG +
Preference number: 4 (lower is better)
Translates to: SLLQGHRQLMASCCRPCSGRPRA*RTMSAT
Trigger: CGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCC...ACTACAGGGTCTACAACACGATGCCATGAGCTGACGGTGTCCCTGGAGCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp GTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCGGGCCACAGCCATGGTaGGCGATGGTCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPVIQSYVLSLELPPCELGPQPW*AMVPGS
Trigger: GCTCCCTGGGACCATCGCCCACCATGGCTGTGGCCC...GAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GCCACGAGCCTGCCGCACCATGAGCGCTACGTCCTCATCCGACAGCAGCCGAACAACGCTGTTGCCCTGTaGGGACACGCTCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: ATSLPHHERYVLIRQQPNNAVAL*GHALDF
Trigger: AAAGTCAAGAGCGTGTCCCCACAGGGCAACAGCGTT...GTTCGGCTGCTGTCGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp CAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTGAGGGAAGATGCCCGTaGCTCCCCGGACAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QPNQIPLSVPVIQSYVLSEGRCP*LPGQCP
Trigger: AGGGCACTGTCCGGGGAGCCACGGGCATCTTCCCTC...AGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCCCCAGACCGGCAGGCTaGGCAGGCTCTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPPRPAG*AGSSCR
Trigger: CCTACATGAAGAGCCTGCTCAGCCTGCCGGTCTGGG...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCTCTCGGCCCGCAGCTaGTGGGCCACAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPLSARS*WATAMV
Trigger: CACCATGGCTGTGGCCCAGCAGCTGCGGGCCGAGAG...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR GCA 90 bp AACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCTCGGCCCGCAGCTaGTGGGCCACAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: NQIPLSVPVIQSYVLSLELSARS*WATAMV
Trigger: CACCATGGCTGTGGCCCAGCAGCTGCGGGCCGAGAG...TTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp CCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCTCTCGGAGCTGCCATaGGGTCAACGCTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PTAAEPDPPQRPGNSELCLSELP*GQRCCP
Trigger: AGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGAG...ACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp CAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCCTCTCGGAGCTGCCATaGGGTCAACGCTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QQPNQIPLSVPVIQSYVLLSELP*GQRCCP
Trigger: AGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGAG...GAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCTCAGCCTGTGGTCCTaGGAGTCCCCAGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PDPPQRPGNSELCPLSGTLSLWS*ESPGAA
Trigger: GGCAGCTCCTGGGGACTCCCAGGACCACAGGCTGAG...AGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp ATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGGTCCTCAGCCTGTGGTCCTaGGAGTCCCCAGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: IQSYVLSLELPPCELQQVLSLWS*ESPGAA
Trigger: GGCAGCTCCTGGGGACTCCCAGGACCACAGGCTGAG...GACCTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTGCTGGGCCACAGCCATaGTGGGCGATGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPAGPQP*WAMVPG
Trigger: CCCTGGGACCATCGCCCACCATGGCTGTGGCCCAGC...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACAGAGGGAAGATGCCCGTaGCTCCCCGGACAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTEGRCP*LPGQCP
Trigger: AGGGCACTGTCCGGGGAGCCACGGGCATCTTCCCTC...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCAACGCAGCCAGTTGGTaGGGTCGTCCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AAEPDPPQRPGNSELCPLNAASW*GRPPQG
Trigger: TCCCTGAGGAGGACGACCCCACCAACTGGCTGCGTT...GAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCAGCAACGCAGCCAGTTaGTGGGGTCGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAEPDPPQRPGNSELCPLSNAAS*WGRPPQ
Trigger: CTGAGGAGGACGACCCCACCAACTGGCTGCGTTGCT...GAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCGGGAAGAGGCGCTTCTaGGAGGGGAGGCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: RQITSPTGPLASKTGSLPGKRRF*EGRPRA
Trigger: GGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCGGGAAGAGGCGCTTCTaGGAGGGGAGGCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIGKRRF*EGRPRA
Trigger: GGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGGGCACCTGCTCTaGGTCATAGGGCGACTGGTA +
Preference number: 4 (lower is better)
Translates to: QPNQIPLSVPVIQSYVLSLGHLL*VIGRLV
Trigger: TACCAGTCGCCCTATGACTCAGAGCAGGTGCCCCAG...AGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTATAGGGGAGTGCTGCTaGGATCTTCCTCCACCGCGA +
Preference number: 4 (lower is better)
Translates to: PTAAEPDPPQRPGNSELCIGECC*DLPPPR
Trigger: TCGCGGTGGAGGAAGATCTCAGCAGCACTCCCCTAT...ACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTATAGGGGAGTGCTGCTaGGATCTTCCTCCACCGCGA +
Preference number: 4 (lower is better)
Translates to: PLSVPVIQSYVLSLELPPIGECC*DLPPPR
Trigger: TCGCGGTGGAGGAAGATCTCAGCAGCACTCCCCTAT...AGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTATGTCCCTAAGGGGGTaGCAGGCTGGAGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTAAEPDPPQRPGNSELCMSLRG*QAGVRR
Trigger: CCTCCTTACTCCAGCCTGTCACCCCCTTAGGGACAT...ACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACACCAGGGCACTGCTCTTaGTGTCTGGCCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTPGHCS*CLARSA
Trigger: AGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGG...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGACCAGGGCACTGCTCTTaGTGTCTGGCCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: EPDPPQRPGNSELCPLSGPGHCS*CLARSA
Trigger: AGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGG...TCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp GTAGACCCTGTAGTTGTCCTTCTGCGTGATGTGCAGCTTCCAGGGGAAGAGGCGTACAGGCCAGGGCACTaGTCTTGCTGTCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: VDPVVVLLRDVQLPGEEAYRPGH*SCCLAR
Trigger: TCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTA...CGCCTCTTCCCCTGGAAGCTGCACATCACGCAGAAGGACAACTACAGGGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp GCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTTCTCGTCTCAGCCTGTaGTCCTGGGAGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AEPDPPQRPGNSELCPLSSRLSL*SWESPG
Trigger: TCCTGGGGACTCCCAGGACCACAGGCTGAGACGAGA...AGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCGTCCCAGGGAGCAGGTaGAGAGTCTCGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIVPGSR*RVSPSQ
Trigger: CTGGCTGGGCGAGACTCTCCACCTGCTCCCTGGGAC...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCCACCCACGTAGACTTTaGCTGGGAGTGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPHPRRL*LGVWAG
Trigger: CCCTGCCCACACTCCCAGCCAAAGTCTACGTGGGTG...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCAGCCGGCGGAGTGCCTaGGGCACCTGCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RQITSPTGPLASKTGSLPSRRSA*GTCSES
Trigger: TGACTCAGAGCAGGTGCCCCAGGCACTCCGCCGGCT...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCAACGCAGCCAGTTGGTaGGGTCGTCCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPNAASW*GRPPQG
Trigger: TCCCTGAGGAGGACGACCCCACCAACTGGCTGCGTT...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCAGCAACGCAGCCAGTTaGTGGGGTCGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPSNAAS*WGRPPQ
Trigger: CTGAGGAGGACGACCCCACCAACTGGCTGCGTTGCT...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCATCTGGGAGCCACTaGGGGCTTTGGAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AAEPDPPQRPGNSELCPLSSGSH*GLWSGR
Trigger: TCTCCCACTCCAAAGCCCCCAGTGGCTCCCAGATGA...GAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCGCATTGTGGCTCATCTaGGAGCCACTGGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AAEPDPPQRPGNSELCPLALWLI*EPLGAL
Trigger: CAAAGCCCCCAGTGGCTCCCAGATGAGCCACAATGC...GAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCCCAGACCGGCAGGCTaGGCAGGCTCTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSAPRPAG*AGSSCR
Trigger: CCTACATGAAGAGCCTGCTCAGCCTGCCGGTCTGGG...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCTGGGGCACCTGCTCTaGGTCATAGGGCGACTGGTA +
Preference number: 4 (lower is better)
Translates to: PVIQSYVLSLELPPCELQLGHLL*VIGRLV
Trigger: TACCAGTCGCCCTATGACTCAGAGCAGGTGCCCCAG...CTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp GCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTaGGCTCCAGCAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: AEPDPPQRPGNSELCPLSGTPAL*APAGLS
Trigger: TGAAAGACCTGCTGGAGCTCACAAGGCGGGAGTTCC...AGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCCAGGGCACTGCTCTTaGTGTCTGGCCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIPGHCS*CLARSA
Trigger: AGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGG...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp CTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTTACAGGCCAGGGCACTaGTCTTGCTGTCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LSVPVIQSYVLSLELPPCYRPGH*SCCLAR
Trigger: TCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTA...ACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACATACAGGCCAGGGCACTaGTCTTGCTGTCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTYRPGH*SCCLAR
Trigger: TCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTA...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp CCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGTGCGGTCAACGCTGTTaGCCTGTGGGGACACGCTCT +
Preference number: 4 (lower is better)
Translates to: PVIQSYVLSLELPPCELQCGQRC*PVGTRS
Trigger: AGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCA...CTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCAGGAGAGAGGGAAGATaGCCGTGGCTCCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIRREGR*PWLPGQ
Trigger: CTGTCCGGGGAGCCACGGGCATCTTCCCTCTCTCCT...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGGGAGGCCACGAGCCTaGCGCACCATGAGCGCTACG +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLGRPRA*RTMSAT
Trigger: CGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCC...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp CCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGACTGCTCTTGCTGTCTaGCCCGAAGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PVIQSYVLSLELPPCELQTALAV*PEALLQ
Trigger: CTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGT...CTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCACGTAGACTTTGGCTaGGAGTGTGGGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: PTAAEPDPPQRPGNSELCHVDFG*ECGQGT
Trigger: TGTACCCTGCCCACACTCCCAGCCAAAGTCTACGTG...ACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp ATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGGTCAACGCAGCCAGTTGGTaGGGTCGTCCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: IQSYVLSLELPPCELQQVNAASW*GRPPQG
Trigger: TCCCTGAGGAGGACGACCCCACCAACTGGCTGCGTT...GACCTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp TTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGGTCTAGCCACTGGGGGCTTTaGAGTGGGAGAGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: FRAMSSLWNSRLVSSSRSSHWGL*SGRGTH
Trigger: ATGGGTCCCTCTCCCACTCCAAAGCCCCCAGTGGCT...AGACCTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTCATCTGGGAGCCACTaGGGGCTTTGGAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PQRPGNSELCPLSGTPALSSGSH*GLWSGR
Trigger: TCTCCCACTCCAAAGCCCCCAGTGGCTCCCAGATGA...CAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCGCATTGTGGCTCATCTaGGAGCCACTGGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPALWLI*EPLGAL
Trigger: CAAAGCCCCCAGTGGCTCCCAGATGAGCCACAATGC...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp GCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTCTGGCCAGGCCACCCTaGACGTTGATGGCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: AEPDPPQRPGNSELCPLSLARPP*TLMACY
Trigger: GTAACAAGCCATCAACGTCCAGGGTGGCCTGGCCAG...AGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCAAGGGGGTGACAGGCTaGAGTAAGGAGGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: DPPQRPGNSELCPLSGTPKGVTG*SKEASG
Trigger: GCCTGATGCCTCCTTACTCCAGCCTGTCACCCCCTT...GGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCGGTAGCGGCGGTAGATaGGGTACTTGGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPGSGGR*GTWILL
Trigger: AAGGAGGATCCAAGTACCTCATCTACCGCCGCTACC...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCTCTTCATGTAGGCGTTaGGGGCAGGTATCCGCATCT +
Preference number: 4 (lower is better)
Translates to: RQQPNQIPLSVPVIQSYVSSCRR*GQVSAS
Trigger: AGATGCGGATACCTGCCCTCAACGCCTACATGAAGA...GACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCTGGGGCACCTGCTCTaGGTCATAGGGCGACTGGTA +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPLGHLL*VIGRLV
Trigger: TACCAGTCGCCCTATGACTCAGAGCAGGTGCCCCAG...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCGGAACTCCCGCCTTGTaGGCTCCAGCAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QIPLSVPVIQSYVLSLELGTPAL*APAGLS
Trigger: TGAAAGACCTGCTGGAGCTCACAAGGCGGGAGTTCC...GAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACAGGAACTCCCGCCTTGTaGGCTCCAGCAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTGTPAL*APAGLS
Trigger: TGAAAGACCTGCTGGAGCTCACAAGGCGGGAGTTCC...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTGGCCACCCTGGACGTTaGTGGCTTGTTACAGCATTG +
Preference number: 4 (lower is better)
Translates to: QPNQIPLSVPVIQSYVLSGHPGR*WLVTAL
Trigger: CAATGCTGTAACAAGCCATCAACGTCCAGGGTGGCC...AGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCTACAGGCCAGGGCACTaGTCTTGCTGTCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RQITSPTGPLASKTGSLPYRPGH*SCCLAR
Trigger: TCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTA...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp TTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGGTCTCTCTGCTCTCGGAGCTaGCATGCGGTCAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: FRAMSSLWNSRLVSSSRSLCSRS*HAVNAV
Trigger: AACAGCGTTGACCGCATGGCAGCTCCGAGAGCAGAG...AGACCTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp ATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGGTCCTCTGCTCTCGGAGCTaGCATGCGGTCAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: IQSYVLSLELPPCELQQVLCSRS*HAVNAV
Trigger: AACAGCGTTGACCGCATGGCAGCTCCGAGAGCAGAG...GACCTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGGAGGCCACGAGCCTaGCGCACCATGAGCGCTACG +
Preference number: 4 (lower is better)
Translates to: KETDYKPHGSISLKDRKSGRPRA*RTMSAT
Trigger: CGTAGCGCTCATGGTGCGGCAGGCTCGTGGCCTCCC...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCTCAGCCTGTGGTCCTaGGAGTCCCCAGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLLSLWS*ESPGAA
Trigger: GGCAGCTCCTGGGGACTCCCAGGACCACAGGCTGAG...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCTCTCGTCTCAGCCTGTaGTCCTGGGAGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPISRLSL*SWESPG
Trigger: TCCTGGGGACTCCCAGGACCACAGGCTGAGACGAGA...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTACTGCTCTTGCTGTCTaGCCCGAAGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPTALAV*PEALLQ
Trigger: CTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGT...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCACTGCTCTTGCTGTCTaGCCCGAAGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSATALAV*PEALLQ
Trigger: CTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGT...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCACTGCTCTTGCTGTCTaGCCCGAAGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPITALAV*PEALLQ
Trigger: CTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGT...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCCACGTAGACTTTGGCTaGGAGTGTGGGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPHVDFG*ECGQGT
Trigger: TGTACCCTGCCCACACTCCCAGCCAAAGTCTACGTG...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGCACCCACGTAGACTTTaGCTGGGAGTGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VIQSYVLSLELPPCELQQHPRRL*LGVWAG
Trigger: CCCTGCCCACACTCCCAGCCAAAGTCTACGTGGGTG...CTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCACCCACGTAGACTTTaGCTGGGAGTGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIHPRRL*LGVWAG
Trigger: CCCTGCCCACACTCCCAGCCAAAGTCTACGTGGGTG...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTAACGCAGCCAGTTGGTaGGGTCGTCCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPNAASW*GRPPQG
Trigger: TCCCTGAGGAGGACGACCCCACCAACTGGCTGCGTT...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCAGCAACGCAGCCAGTTaGTGGGGTCGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSASNAAS*WGRPPQ
Trigger: CTGAGGAGGACGACCCCACCAACTGGCTGCGTTGCT...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCGCTATGTCCTCTCTCTaGAACTCCCGCCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPAMSSL*NSRLVS
Trigger: GCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGC...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp ACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTGCTATGTCCTCTCTCTaGAACTCCCGCCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TAAEPDPPQRPGNSELCPAMSSL*NSRLVS
Trigger: GCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGC...AGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGGAAGAGGCGCTTCTaGGAGGGGAGGCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: KETDYKPHGSISLKDRKSGKRRF*EGRPRA
Trigger: GGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp CGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCCTCCCAGGTTTTCCTaGTCCCAATCTCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RQQPNQIPLSVPVIQSYVPPRFS*SQSPLR
Trigger: TCTCAGAGGAGATTGGGACCAGGAAAACCTGGGAGG...GACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCAGCCACTGGGGGCTTTaGAGTGGGAGAGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPISHWGL*SGRGTH
Trigger: ATGGGTCCCTCTCCCACTCCAAAGCCCCCAGTGGCT...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp CCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGAAGGGGGTGACAGGCTaGAGTAAGGAGGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PVIQSYVLSLELPPCELQKGVTG*SKEASG
Trigger: GCCTGATGCCTCCTTACTCCAGCCTGTCACCCCCTT...CTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGGGTAGCGGCGGTAGATaGGGTACTTGGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PVIQSYVLSLELPPCELQGSGGR*GTWILL
Trigger: AAGGAGGATCCAAGTACCTCATCTACCGCCGCTACC...CTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCATAGGGGAGTGCTGCTaGGATCTTCCTCCACCGCGA +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSAIGECC*DLPPPR
Trigger: TCGCGGTGGAGGAAGATCTCAGCAGCACTCCCCTAT...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCATAGGGGAGTGCTGCTaGGATCTTCCTCCACCGCGA +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIIGECC*DLPPPR
Trigger: TCGCGGTGGAGGAAGATCTCAGCAGCACTCCCCTAT...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCGGAACTCCCGCCTTGTaGGCTCCAGCAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSAGTPAL*APAGLS
Trigger: TGAAAGACCTGCTGGAGCTCACAAGGCGGGAGTTCC...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTGGAACTCCCGCCTTGTaGGCTCCAGCAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPGTPAL*APAGLS
Trigger: TGAAAGACCTGCTGGAGCTCACAAGGCGGGAGTTCC...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTGAGCCTGCCGCACCATaGGCGCTACGTCCTCATCCG +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSEPAAP*ALRPHP
Trigger: CGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTC...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAGAGCCTGCCGCACCATaGGCGCTACGTCCTCATCCG +
Preference number: 4 (lower is better)
Translates to: SRKRQITSPTGPLASKTGEPAAP*ALRPHP
Trigger: CGGATGAGGACGTAGCGCTCATGGTGCGGCAGGCTC...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACAAGTTGTCCTTCTGCGTaGTGTGCAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTSCPSA*CAASRG
Trigger: TCCCCTGGAAGCTGCACATCACGCAGAAGGACAACT...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CATCCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTAGGTCCCAATCTCCTCTaGGAGCTGAAGGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HPTAAEPDPPQRPGNSELGPNLL*ELKVFA
Trigger: AGCAAAAACCTTCAGCTCTCAGAGGAGATTGGGACC...TAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR TCA 90 bp TCACTGCTCCAGGGACACCGTCAGCTCATGGCATCGTGTTGTAGACCCTGTAGTGGCCACCCTGGACGTTaGTGGCTTGTTACAGCATTG +
Preference number: 4 (lower is better)
Translates to: SLLQGHRQLMASCCRPCSGHPGR*WLVTAL
Trigger: CAATGCTGTAACAAGCCATCAACGTCCAGGGTGGCC...ACTACAGGGTCTACAACACGATGCCATGAGCTGACGGTGTCCCTGGAGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR TCA 90 bp AACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAAATGTCCCTAAGGGGGTaGCAGGCTGGAGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NQIPLSVPVIQSYVLSLEMSLRG*QAGVRR
Trigger: CCTCCTTACTCCAGCCTGTCACCCCCTTAGGGACAT...TTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGAGTCCCCAGGAGCTaGCTTTGGGGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KETDYKPHGSISLKDRKSGVPRS*LWGGSG
Trigger: GCCTGAGCCTCCCCAAAGGCAGCTCCTGGGGACTCC...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR GCA 90 bp CCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGAGCGCTCCTCCAGCTTaGTCTGCAAAGCATGGAACT +
Preference number: 4 (lower is better)
Translates to: PQRPGNSELCPLSGTPALSAPPA*SAKHGT
Trigger: AGTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCT...CAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCTCTGCTCTCGGAGCTaGCATGCGGTCAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSALCSRS*HAVNAV
Trigger: AACAGCGTTGACCGCATGGCAGCTCCGAGAGCAGAG...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCTGCTCTCGGAGCTaGCATGCGGTCAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPILCSRS*HAVNAV
Trigger: AACAGCGTTGACCGCATGGCAGCTCCGAGAGCAGAG...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp CCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTTCCTTCTGCGTGATGTaGAGCTTCCAGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PDPPQRPGNSELCPLSGTSFCVM*SFQGKR
Trigger: CCTCTTCCCCTGGAAGCTGCACATCACGCAGAAGGA...AGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR GCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCTCACCTACATCCCAGTaGCCAGAACAGAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPISPTSQ*PEQSPA
Trigger: TGCCGGGCTCTGTTCTGGGCACTGGGATGTAGGTGA...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650698.1
CDS-3UTR CCA 90 bp TTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGGTCTCACGTAGACTTTGGCTaGGAGTGTGGGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: FRAMSSLWNSRLVSSSRSHVDFG*ECGQGT
Trigger: TGTACCCTGCCCACACTCCCAGCCAAAGTCTACGTG...AGACCTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACACACGTAGACTTTGGCTaGGAGTGTGGGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTHVDFG*ECGQGT
Trigger: TGTACCCTGCCCACACTCCCAGCCAAAGTCTACGTG...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGCCGGCGGAGTGCCTaGGGCACCTGCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SRKRQITSPTGPLASKTGSRRSA*GTCSES
Trigger: TGACTCAGAGCAGGTGCCCCAGGCACTCCGCCGGCT...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTAGCCGGCGGAGTGCCTaGGGCACCTGCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSSRRSA*GTCSES
Trigger: TGACTCAGAGCAGGTGCCCCAGGCACTCCGCCGGCT...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTGAGGGAAGATGCCCGTaGCTCCCCGGACAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSEGRCP*LPGQCP
Trigger: AGGGCACTGTCCGGGGAGCCACGGGCATCTTCCCTC...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTGGCCAGGCCACCCTaGACGTTGATGGCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: NQIPLSVPVIQSYVLSLELARPP*TLMACY
Trigger: GTAACAAGCCATCAACGTCCAGGGTGGCCTGGCCAG...TTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCAAACAAAGTGGCTGGTaGAGCCTCTCTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPKQSGW*SLSSPR
Trigger: TCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGTTT...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CACTGCTCCAGGGACACCGTCAGCTCATGGCATCGTGTTGTAGACCCTGTAGTTTCTTCATGTAGGCGTTaGGGGCAGGTATCCGCATCT +
Preference number: 4 (lower is better)
Translates to: HCSRDTVSSWHRVVDPVVSSCRR*GQVSAS
Trigger: AGATGCGGATACCTGCCCTCAACGCCTACATGAAGA...AACTACAGGGTCTACAACACGATGCCATGAGCTGACGGTGTCCCTGGAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR TCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCCCAGACCGGCAGGCTaGGCAGGCTCTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSPRPAG*AGSSCR
Trigger: CCTACATGAAGAGCCTGCTCAGCCTGCCGGTCTGGG...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCTGGGGCACCTGCTCTaGGTCATAGGGCGACTGGTA +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLLGHLL*VIGRLV
Trigger: TACCAGTCGCCCTATGACTCAGAGCAGGTGCCCCAG...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGCCTCAGGGAAGTCTTTaGGGATCTTCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PQRPGNSELCPLSGTPALPQGSL*GSSRRR
Trigger: TCTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGG...CAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCAGTTGTCCTTCTGCGTaGTGTGCAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSASCPSA*CAASRG
Trigger: TCCCCTGGAAGCTGCACATCACGCAGAAGGACAACT...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp CTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTAGCGCTCCTCCAGCTTaGTCTGCAAAGCATGGAACT +
Preference number: 4 (lower is better)
Translates to: LSVPVIQSYVLSLELPPCSAPPA*SAKHGT
Trigger: AGTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCT...ACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGACCAGGGCACTGCTCTTaGTGTCTGGCCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRKRQITSPTGPLASKTGPGHCS*CLARSA
Trigger: AGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGG...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGTGCGGTCAACGCTGTTaGCCTGTGGGGACACGCTCT +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLCGQRC*PVGTRS
Trigger: AGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCA...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCTCTCGGAGCTGCCATaGGGTCAACGCTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLLSELP*GQRCCP
Trigger: AGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGAG...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTAGGAGAGAGGGAAGATaGCCGTGGCTCCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: KETDYKPHGSISLKDRKSRREGR*PWLPGQ
Trigger: CTGTCCGGGGAGCCACGGGCATCTTCCCTCTCTCCT...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTAGGAGAGAGGGAAGATaGCCGTGGCTCCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSRREGR*PWLPGQ
Trigger: CTGTCCGGGGAGCCACGGGCATCTTCCCTCTCTCCT...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCTCCTTCTGCGTGATGTaGAGCTTCCAGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPISFCVM*SFQGKR
Trigger: CCTCTTCCCCTGGAAGCTGCACATCACGCAGAAGGA...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCTCCTTCTGCGTGATGTaGAGCTTCCAGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSASFCVM*SFQGKR
Trigger: CCTCTTCCCCTGGAAGCTGCACATCACGCAGAAGGA...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGTGTCCCCTCACTaGTCCAGGGACACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSLVSPH*SRDTVS
Trigger: GCTGACGGTGTCCCTGGAGCAGTGAGGGGACACCAG...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp CAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTAGAGCTGAAGGTTTTTaGTGGTGTCCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: QPNQIPLSVPVIQSYVLSRAEGF*WCPLTA
Trigger: AGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCT...AGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR GCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCAGAGCTGAAGGTTTTTaGTGGTGTCCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPRAEGF*WCPLTA
Trigger: AGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCT...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGCCATGGTGGGCGATaGTCCCAGGGAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SRKRQITSPTGPLASKTGSHGGR*SQGAGG
Trigger: TCCACCTGCTCCCTGGGACCATCGCCCACCATGGCT...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTAGCCATGGTGGGCGATaGTCCCAGGGAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSSHGGR*SQGAGG
Trigger: TCCACCTGCTCCCTGGGACCATCGCCCACCATGGCT...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGGGGCCACAGCCATGGTaGGCGATGGTCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKGPQPW*AMVPGS
Trigger: GCTCCCTGGGACCATCGCCCACCATGGCTGTGGCCC...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAGCTGGGCCACAGCCATaGTGGGCGATGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASAGPQP*WAMVPG
Trigger: CCCTGGGACCATCGCCCACCATGGCTGTGGCCCAGC...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248899.11
ENST00000397147.7
CDS-3UTR CCA 90 bp CAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QPNQIPLSVPVIQSYVLSQCWPR*QHHPEA
Trigger: AGCTTCCGGATGATGTTGCCATCTCGGCCAACATTG...AGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AEPDPPQRPGNSELCPLSQCWPR*QHHPEA
Trigger: AGCTTCCGGATGATGTTGCCATCTCGGCCAACATTG...AGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCCGATGTCAGCAATGTTaGCCGAGATGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: AAEPDPPQRPGNSELCPLRCQQC*PRWQHH
Trigger: ATGATGTTGCCATCTCGGCCAACATTGCTGACATCG...GAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CATCCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTACGATGTCAGCAATGTTaGCCGAGATGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: HPTAAEPDPPQRPGNSELRCQQC*PRWQHH
Trigger: ATGATGTTGCCATCTCGGCCAACATTGCTGACATCG...TAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCACGTAGACTTTGGCTaGGAGTGTGGGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPHVDFG*ECGQGT
Trigger: TGTACCCTGCCCACACTCCCAGCCAAAGTCTACGTG...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCAACGCTGTTGCCCTGTaGGGACACGCTCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: VPVIQSYVLSLELPPCELNAVAL*GHALDF
Trigger: AAAGTCAAGAGCGTGTCCCCACAGGGCAACAGCGTT...GAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCGCTATGTCCTCTCTCTaGAACTCCCGCCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIAMSSL*NSRLVS
Trigger: GCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGC...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTGCTATGTCCTCTCTCTaGAACTCCCGCCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPAMSSL*NSRLVS
Trigger: GCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGC...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAGGGAAGAGGCGCTTCTaGGAGGGGAGGCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASGKRRF*EGRPRA
Trigger: GGCTCGTGGCCTCCCCTCCCAGAAGCGCCTCTTCCC...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp CCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTGACACCGTCAGCTCATaGCATCGTGTTGTAGACCCT +
Preference number: 4 (lower is better)
Translates to: PDPPQRPGNSELCPLSGTDTVSS*HRVVDP
Trigger: AGGGTCTACAACACGATGCCATGAGCTGACGGTGTC...AGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp GTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCGCTGAAGGTTTTTGCTaGTGTCCCCTCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPVIQSYVLSLELPPCELAEGFC*CPLTAP
Trigger: TGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGC...GAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CCA 90 bp CCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGCTTGTTACAGCATTGTaGCTCATCTGGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: PQRPGNSELCPLSGTPALLVTAL*LIWEPL
Trigger: CAGTGGCTCCCAGATGAGCCACAATGCTGTAACAAG...CAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTAAACAAAGTGGCTGGTaGAGCCTCTCTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PDPPQRPGNSELCPLSGTKQSGW*SLSSPR
Trigger: TCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGTTT...AGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCTCTTCATGTAGGCGTTaGGGGCAGGTATCCGCATCT +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSASSCRR*GQVSAS
Trigger: AGATGCGGATACCTGCCCTCAACGCCTACATGAAGA...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTGTTTGCTGTTTCCAGTaGAGTCAAATAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PTAAEPDPPQRPGNSELCVCCFQ*SQIEPL
Trigger: CAGAGGCTCTATTTGACTTCACTGGAAACAGCAAAC...ACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp CCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCCTCAGGGAAGTCTTTaGGGATCTTCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PVIQSYVLSLELPPCELQPQGSL*GSSRRR
Trigger: TCTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGG...CTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR GCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCAGCGCTCCTCCAGCTTaGTCTGCAAAGCATGGAACT +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPISAPPA*SAKHGT
Trigger: AGTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCT...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTTGCGGTCAACGCTGTTaGCCTGTGGGGACACGCTCT +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSCGQRC*PVGTRS
Trigger: AGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCA...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTCTCGGAGCTGCCATaGGGTCAACGCTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSLSELP*GQRCCP
Trigger: AGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGAG...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTCTCTCGGAGCTGCCATaGGGTCAACGCTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KETDYKPHGSISLKDRKSLSELP*GQRCCP
Trigger: AGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGAG...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCCGATGTCAGCAATGTTaGCCGAGATGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPRCQQC*PRWQHH
Trigger: ATGATGTTGCCATCTCGGCCAACATTGCTGACATCG...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCACCCACGTAGACTTTaGCTGGGAGTGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSHPRRL*LGVWAG
Trigger: CCCTGCCCACACTCCCAGCCAAAGTCTACGTGGGTG...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGACACCCACGTAGACTTTaGCTGGGAGTGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRKRQITSPTGPLASKTGHPRRL*LGVWAG
Trigger: CCCTGCCCACACTCCCAGCCAAAGTCTACGTGGGTG...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCAACGCTGTTGCCCTGTaGGGACACGCTCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPINAVAL*GHALDF
Trigger: AAAGTCAAGAGCGTGTCCCCACAGGGCAACAGCGTT...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCAACGCTGTTGCCCTGTaGGGACACGCTCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSANAVAL*GHALDF
Trigger: AAAGTCAAGAGCGTGTCCCCACAGGGCAACAGCGTT...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGGAGGGAAGATGCCCGTaGCTCCCCGGACAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKEGRCP*LPGQCP
Trigger: AGGGCACTGTCCGGGGAGCCACGGGCATCTTCCCTC...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCGACACCGTCAGCTCATaGCATCGTGTTGTAGACCCT +
Preference number: 4 (lower is better)
Translates to: RQITSPTGPLASKTGSLPDTVSS*HRVVDP
Trigger: AGGGTCTACAACACGATGCCATGAGCTGACGGTGTC...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCGCTGAAGGTTTTTGCTaGTGTCCCCTCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSAAEGFC*CPLTAP
Trigger: TGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGC...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCTCCCAGGTTTTCCTaGTCCCAATCTCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPPPRFS*SQSPLR
Trigger: TCTCAGAGGAGATTGGGACCAGGAAAACCTGGGAGG...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTAAACAAAGTGGCTGGTaGAGCCTCTCTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPKQSGW*SLSSPR
Trigger: TCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGTTT...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCCTCAGGGAAGTCTTTaGGGATCTTCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QITSPTGPLASKTGSLPIPQGSL*GSSRRR
Trigger: TCTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGG...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTGGTCCCAATCTCCTCTaGGAGCTGAAGGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPGPNLL*ELKVFA
Trigger: AGCAAAAACCTTCAGCTCTCAGAGGAGATTGGGACC...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTCTGCTCTCGGAGCTaGCATGCGGTCAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSLCSRS*HAVNAV
Trigger: AACAGCGTTGACCGCATGGCAGCTCCGAGAGCAGAG...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCAGAGCTGAAGGTTTTTaGTGGTGTCCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSARAEGF*WCPLTA
Trigger: AGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCT...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTTCCCCTGTAGGCATTTaGTTCTGCTGCCCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: KETDYKPHGSISLKDRKSSPVGI*FCCPCP
Trigger: GGGGCAAGGGCAGCAGAAGCAAATGCCTACAGGGGA...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650827.1
CDS-3UTR CCA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RQITSPTGPLASKTGSLPQCWPR*QHHPEA
Trigger: AGCTTCCGGATGATGTTGCCATCTCGGCCAACATTG...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTATGACGAAAACAAAGTaGCTGGTGAAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: AEPDPPQRPGNSELCPLSMTKTK*LVKPLF
Trigger: GAAGAGAGGCTTCACCAGCCACTTTGTTTTCGTCAT...AGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CCA 90 bp CAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTATGACGAAAACAAAGTaGCTGGTGAAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QPNQIPLSVPVIQSYVLSMTKTK*LVKPLF
Trigger: GAAGAGAGGCTTCACCAGCCACTTTGTTTTCGTCAT...AGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCTTGTCTTCACCTCGATaGCGAAAACAAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQITSPTGPLASKTGSLPLSSPR*RKQSGW
Trigger: CCAGCCACTTTGTTTTCGTCATCGAGGTGAAGACAA...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTGGTAGCGGCGGTAGATaGGGTACTTGGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSGSGGR*GTWILL
Trigger: AAGGAGGATCCAAGTACCTCATCTACCGCCGCTACC...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAGGTAGCGGCGGTAGATaGGGTACTTGGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRKRQITSPTGPLASKTGGSGGR*GTWILL
Trigger: AAGGAGGATCCAAGTACCTCATCTACCGCCGCTACC...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGCTGGGGCACCTGCTCTaGGTCATAGGGCGACTGGTA +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKLGHLL*VIGRLV
Trigger: TACCAGTCGCCCTATGACTCAGAGCAGGTGCCCCAG...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp CAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCGTTTGCTGTTTCCAGTaGAGTCAAATAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QIPLSVPVIQSYVLSLELVCCFQ*SQIEPL
Trigger: CAGAGGCTCTATTTGACTTCACTGGAAACAGCAAAC...GAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR TCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTAGTTGTCCTTCTGCGTaGTGTGCAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSSCPSA*CAASRG
Trigger: TCCCCTGGAAGCTGCACATCACGCAGAAGGACAACT...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGTACAGGCCAGGGCACTaGTCTTGCTGTCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKYRPGH*SCCLAR
Trigger: TCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTA...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGTGCGGTCAACGCTGTTaGCCTGTGGGGACACGCTCT +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKCGQRC*PVGTRS
Trigger: AGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCA...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCGATGTCAGCAATGTTaGCCGAGATGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSARCQQC*PRWQHH
Trigger: ATGATGTTGCCATCTCGGCCAACATTGCTGACATCG...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAACTGCTCTTGCTGTCTaGCCCGAAGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASTALAV*PEALLQ
Trigger: CTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGT...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAACGCAGCCAGTTGGTaGGGTCGTCCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASNAASW*GRPPQG
Trigger: TCCCTGAGGAGGACGACCCCACCAACTGGCTGCGTT...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAGCAACGCAGCCAGTTaGTGGGGTCGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASSNAAS*WGRPPQ
Trigger: CTGAGGAGGACGACCCCACCAACTGGCTGCGTTGCT...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGACACCGTCAGCTCATaGCATCGTGTTGTAGACCCT +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLDTVSS*HRVVDP
Trigger: AGGGTCTACAACACGATGCCATGAGCTGACGGTGTC...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGAAACAAAGTGGCTGGTaGAGCCTCTCTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLKQSGW*SLSSPR
Trigger: TCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGTTT...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCGTTTGCTGTTTCCAGTaGAGTCAAATAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ETDYKPHGSISLKDRKSAVCCFQ*SQIEPL
Trigger: CAGAGGCTCTATTTGACTTCACTGGAAACAGCAAAC...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTGTTTGCTGTTTCCAGTaGAGTCAAATAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPVCCFQ*SQIEPL
Trigger: CAGAGGCTCTATTTGACTTCACTGGAAACAGCAAAC...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCTCAGGGAAGTCTTTaGGGATCTTCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLPQGSL*GSSRRR
Trigger: TCTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGG...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGATAGGGGAGTGCTGCTaGGATCTTCCTCCACCGCGA +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKIGECC*DLPPPR
Trigger: TCGCGGTGGAGGAAGATCTCAGCAGCACTCCCCTAT...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp AGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGCGCTCCTCCAGCTTaGTCTGCAAAGCATGGAACT +
Preference number: 4 (lower is better)
Translates to: SRKRQITSPTGPLASKTGSAPPA*SAKHGT
Trigger: AGTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCT...TCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTGCTGAAGGTTTTTGCTaGTGTCCCCTCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSAEGFC*CPLTAP
Trigger: TGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGC...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: KETDYKPHGSISLKDRKSQCWPR*QHHPEA
Trigger: AGCTTCCGGATGATGTTGCCATCTCGGCCAACATTG...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCGATGTCAGCAATGTTaGCCGAGATGGCAACATCAT +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLRCQQC*PRWQHH
Trigger: ATGATGTTGCCATCTCGGCCAACATTGCTGACATCG...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGGCTATGTCCTCTCTCTaGAACTCCCGCCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKAMSSL*NSRLVS
Trigger: GCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGC...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGTCTTCATGTAGGCGTTaGGGGCAGGTATCCGCATCT +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKSSCRR*GQVSAS
Trigger: AGATGCGGATACCTGCCCTCAACGCCTACATGAAGA...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGGTTTGCTGTTTCCAGTaGAGTCAAATAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLVCCFQ*SQIEPL
Trigger: CAGAGGCTCTATTTGACTTCACTGGAAACAGCAAAC...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGATGACGAAAACAAAGTaGCTGGTGAAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KRQITSPTGPLASKTGSLMTKTK*LVKPLF
Trigger: GAAGAGAGGCTTCACCAGCCACTTTGTTTTCGTCAT...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAGACACCGTCAGCTCATaGCATCGTGTTGTAGACCCT +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASDTVSS*HRVVDP
Trigger: AGGGTCTACAACACGATGCCATGAGCTGACGGTGTC...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCACCTCCCAGGTTTTCCTaGTCCCAATCTCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASPPRFS*SQSPLR
Trigger: TCTCAGAGGAGATTGGGACCAGGAAAACCTGGGAGG...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGCCTCAGGGAAGTCTTTaGGGATCTTCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKPQGSL*GSSRRR
Trigger: TCTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGG...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR TCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAGGTCCCAATCTCCTCTaGGAGCTGAAGGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASGPNLL*ELKVFA
Trigger: AGCAAAAACCTTCAGCTCTCAGAGGAGATTGGGACC...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAGAGCTGAAGGTTTTTaGTGGTGTCCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASRAEGF*WCPLTA
Trigger: AGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCT...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR GCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAGTAGGTGCTCAGTACTaGTCAATACACGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASVGAQY*SIHGHY
Trigger: GTAGTGGCCGTGTATTGAGCAGTACTGAGCACCTAC...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650698.1
CDS-3UTR CCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKQCWPR*QHHPEA
Trigger: AGCTTCCGGATGATGTTGCCATCTCGGCCAACATTG...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTATGACGAAAACAAAGTaGCTGGTGAAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RKRQITSPTGPLASKTGSMTKTK*LVKPLF
Trigger: GAAGAGAGGCTTCACCAGCCACTTTGTTTTCGTCAT...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGCTTGTTACAGCATTGTaGCTCATCTGGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKLVTAL*LIWEPL
Trigger: CAGTGGCTCCCAGATGAGCCACAATGCTGTAACAAG...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR GCA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCACCGGCATACAGTAGGTaGTCAGTACTGCTCAATACA +
Preference number: 4 (lower is better)
Translates to: DVNSRKRQITSPTGPLASPAYSR*SVLLNT
Trigger: TGTATTGAGCAGTACTGAGCACCTACTGTATGCCGG...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650698.1
CDS-3UTR CCA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGATGACGAAAACAAAGTaGCTGGTGAAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VNSRKRQITSPTGPLASKMTKTK*LVKPLF
Trigger: GAAGAGAGGCTTCACCAGCCACTTTGTTTTCGTCAT...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS TCA 90 bp CCGGGTGCGCGGGCGGAGCCGGCGGAGTGCCTGGGGCACCTGCTCTaGGTCATAGGGCGACTGGTAAAAGAAGATCCGGACGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: PGARAEPAECLGHLL*VIGRLVKEDPDVLI
Trigger: GATGAGGACGTCCGGATCTTCTTTTACCAGTCGCCCTATGACTCAGAGCAGGTGCCCCAGGCACTCCGCCGGCTCCGCCCGCGCACCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CCA 90 bp CTCACTTCCTCCAGCCACCCTGCGTCTCGTCTCAGCCTGTGGTCCTaGGAGTCCCCAGGAGCTGCCTTTGGGGAGGCTCAGGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LTSSSHPASRLSLWS*ESPGAAFGEAQACF
Trigger: GAAGCAGGCCTGAGCCTCCCCAAAGGCAGCTCCTGGGGACTCCCAGGACCACAGGCTGAGACGAGACGCAGGGTGGCTGGAGGAAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
CDS-3UTR CAA 90 bp CCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTGCCAGGGCACTGCTCTaGCTGTCTGGCCCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PLSVPVIQSYVLSLELPPARALL*LSGPKR
Trigger: GCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGC...AGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS CCA 90 bp TGGGAGTGTGGGCAGGGTACAGGCCAGGGCACTGCTCTTGCTGTCTaGCCCGAAGCGCTCCTCCAGCTTGCTCTGCAAAGCATGGAACTG +
Preference number: 5 (lower is better)
Translates to: WECGQGTGQGTALAV*PEALLQLALQSMEL
Trigger: CAGTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTACCCTGCCCACACTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS-3UTR CAA 90 bp ACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTGCCAGGGCACTGCTCTaGCTGTCTGGCCCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: TAAEPDPPQRPGNSELCPARALL*LSGPKR
Trigger: GCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGC...AGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACAGCCAGGGCACTGCTCTaGCTGTCTGGCCCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTARALL*LSGPKR
Trigger: GCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGC...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCGCCAGGGCACTGCTCTaGCTGTCTGGCCCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RQITSPTGPLASKTGSLPARALL*LSGPKR
Trigger: GCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGC...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp GTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCATGCGGTCAACGCTGTaGCCCTGTGGGGACACGCTC +
Preference number: 5 (lower is better)
Translates to: VPVIQSYVLSLELPPCELMRSTL*PCGDTL
Trigger: GAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCAT...GAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp CCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTAAGCGCTCCTCCAGCTaGCTCTGCAAAGCATGGAAC +
Preference number: 5 (lower is better)
Translates to: PTAAEPDPPQRPGNSELCKRSSS*LCKAWN
Trigger: GTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCTT...ACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATGCGGTCAACGCTGTaGCCCTGTGGGGACACGCTC +
Preference number: 5 (lower is better)
Translates to: RQITSPTGPLASKTGSLPMRSTL*PCGDTL
Trigger: GAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCAT...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTATGCGGTCAACGCTGTaGCCCTGTGGGGACACGCTC +
Preference number: 5 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPMRSTL*PCGDTL
Trigger: GAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCAT...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS GCA 90 bp ATACACGGCCACTACCGTCGTCTTGGGGTTCTAGAAAGTCCCCGCTaGGCGAACCTGCGCCCTCTCCTTGTACTCTCTGCTTTGACCTTA +
Preference number: 5 (lower is better)
Translates to: IHGHYRRLGVLESPR*ANLRPLLVLSALTL
Trigger: TAAGGTCAAAGCAGAGAGTACAAGGAGAGGGCGCAGGTTCGCGCAGCGGGGACTTTCTAGAACCCCAAGACGACGGTAGTGGCCGTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651053.1
CDS GCA 90 bp TCACCTACATCCCAGTGCCCAGAACAGAGCCCGGCATACAGTAGGTaGTCAGTACTGCTCAATACACGGCCACTACCGTCGTCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SPTSQCPEQSPAYSR*SVLLNTRPLPSSWG
Trigger: ACCCCAAGACGACGGTAGTGGCCGTGTATTGAGCAGTACTGAGCACCTACTGTATGCCGGGCTCTGTTCTGGGCACTGGGATGTAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651053.1
CDS-3UTR CAA 90 bp TGGCATCGTGTTGTAGACCCTGTAGTTGTCCTTCTGCGTGATGTGCAGCTTCCAATGCGGTCAACGCTGTaGCCCTGTGGGGACACGCTC +
Preference number: 5 (lower is better)
Translates to: WHRVVDPVVVLLRDVQLPMRSTL*PCGDTL
Trigger: GAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCAT...TGGAAGCTGCACATCACGCAGAAGGACAACTACAGGGTCTACAACACGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CAA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACACCCTCCAGCCAGTCTTaGTTGATCCGACTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTPSSQS*LIRLRR
Trigger: CCTCCTCAGTCGGATCAACAAAGACTGGCTGGAGGG...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp CAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCCTCCAGCCAGTCTTaGTTGATCCGACTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: QIPLSVPVIQSYVLSLELPSSQS*LIRLRR
Trigger: CCTCCTCAGTCGGATCAACAAAGACTGGCTGGAGGG...GAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp GTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCCCTCCAGCCAGTCTTaGTTGATCCGACTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VPVIQSYVLSLELPPCELPSSQS*LIRLRR
Trigger: CCTCCTCAGTCGGATCAACAAAGACTGGCTGGAGGG...GAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp GCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: AAEPDPPQRPGNSELCPLSMSAM*AEMATS
Trigger: TGATGTTGCCATCTCGGCCAACATTGCTGACATCGA...GAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACAAAGCGCTCCTCCAGCTaGCTCTGCAAAGCATGGAAC +
Preference number: 5 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTKRSSS*LCKAWN
Trigger: GTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCTT...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGATGCGGTCAACGCTGTaGCCCTGTGGGGACACGCTC +
Preference number: 5 (lower is better)
Translates to: KRQITSPTGPLASKTGSLMRSTL*PCGDTL
Trigger: GAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCAT...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCCCTCCAGCCAGTCTTaGTTGATCCGACTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ETDYKPHGSISLKDRKSAPSSQS*LIRLRR
Trigger: CCTCCTCAGTCGGATCAACAAAGACTGGCTGGAGGG...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp CCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTCCTCAGGGAAGTCTTaGAGGATCTTCACGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PLSVPVIQSYVLSLELPPSSGKS*RIFTKE
Trigger: CTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGGA...AGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp ATCCGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATTGGCTTGTTACAGCATaGTGGCTCATCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: IRQQPNQIPLSVPVIQSYWLVTA*WLIWEP
Trigger: TGGCTCCCAGATGAGCCACAATGCTGTAACAAGCCA...ATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp CGACAGCAGCCGAACCAGATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTGGACGTTGATGGCTaGTTACAGCATTGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: RQQPNQIPLSVPVIQSYVLDVDG*LQHCGS
Trigger: TGAGCCACAATGCTGTAACAAGCCATCAACGTCCAG...GACATAGCTCTGAATTACCGGGACGCTGAGGGGGATCTGGTTCGGCTGCTGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS GCA 90 bp TCACCTACATCCCAGTGCCCAGAACAGAGCCCGGCATACAGTAGGTaGTCAGTACTGCTCAATACACGGCCACTACCGTCGTCTGCAATT +
Preference number: 5 (lower is better)
Translates to: SPTSQCPEQSPAYSR*SVLLNTRPLPSSAI
Trigger: AATTGCAGACGACGGTAGTGGCCGTGTATTGAGCAGTACTGAGCACCTACTGTATGCCGGGCTCTGTTCTGGGCACTGGGATGTAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650698.1
CDS-3UTR CAA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPSMSAM*AEMATS
Trigger: TGATGTTGCCATCTCGGCCAACATTGCTGACATCGA...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCAAGCGCTCCTCCAGCTaGCTCTGCAAAGCATGGAAC +
Preference number: 5 (lower is better)
Translates to: RQITSPTGPLASKTGSLPKRSSS*LCKAWN
Trigger: GTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCTT...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp ATCCCCCTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGTCCTCAGGGAAGTCTTaGAGGATCTTCACGAAGGAG +
Preference number: 5 (lower is better)
Translates to: IPLSVPVIQSYVLSLELPSSGKS*RIFTKE
Trigger: CTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGGA...CGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTTCCACCGCGATGTCCTaGATGGTGCTGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPSTAMS*MVLMVS
Trigger: AGACACCATCAGCACCATCAAGGACATCGCGGTGGA...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248899.11
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp TACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTCCCCTGGACGTTGATGGCTaGTTACAGCATTGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: YKPHGSISLKDRKSAHPPLDVDG*LQHCGS
Trigger: TGAGCCACAATGCTGTAACAAGCCATCAACGTCCAG...GGGAGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CAA 90 bp CCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGAGGCCACCCTGGACGTaGATGGCTTGTTACAGCATT +
Preference number: 5 (lower is better)
Translates to: PVIQSYVLSLELPPCELQRPPWT*MACYSI
Trigger: AATGCTGTAACAAGCCATCAACGTCCAGGGTGGCCT...CTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS GCA 90 bp AGAAAGTCCCCGCTGCGCGAACCTGCGCCCTCTCCTTGTACTCTCTaGTTTGACCTTAAGCAGAACAATCCAGGCTCGCTTTCAGATAAG +
Preference number: 5 (lower is better)
Translates to: RKSPLREPAPSPCTL*FDLKQNNPGSLSDK
Trigger: CTTATCTGAAAGCGAGCCTGGATTGTTCTGCTTAAGGTCAAAGCAGAGAGTACAAGGAGAGGGCGCAGGTTCGCGCAGCGGGGACTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651053.1
CDS-3UTR CAA 90 bp CTCAGCGTCCCGGTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: LSVPVIQSYVLSLELPPCSMSAM*AEMATS
Trigger: TGATGTTGCCATCTCGGCCAACATTGCTGACATCGA...ACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTACCGGGACGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp TCTCCTCTGAGAGCTGAAGGTTTTTGCTGGTGTCCCCTCACTGCTCCAGGGACATCGATGTCAGCAATGTaGGCCGAGATGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: SPLRAEGFCWCPLTAPGTSMSAM*AEMATS
Trigger: TGATGTTGCCATCTCGGCCAACATTGCTGACATCGA...TGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp GTAATTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGAGGCCACCCTGGACGTaGATGGCTTGTTACAGCATT +
Preference number: 5 (lower is better)
Translates to: VIQSYVLSLELPPCELQQRPPWT*MACYSI
Trigger: AATGCTGTAACAAGCCATCAACGTCCAGGGTGGCCT...CTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCA +
Preference number: 5 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPSMSAM*AEMATS
Trigger: TGATGTTGCCATCTCGGCCAACATTGCTGACATCGA...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCCCTCCAGCCAGTCTTaGTTGATCCGACTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RKRQITSPTGPLASKTGSPSSQS*LIRLRR
Trigger: CCTCCTCAGTCGGATCAACAAAGACTGGCTGGAGGG...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp AGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCTCCTCAGGGAAGTCTTaGAGGATCTTCACGAAGGAG +
Preference number: 5 (lower is better)
Translates to: RQITSPTGPLASKTGSLPSSGKS*RIFTKE
Trigger: CTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGGA...GGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCTCCTCAGGGAAGTCTTaGAGGATCTTCACGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QITSPTGPLASKTGSLPISSGKS*RIFTKE
Trigger: CTCCTTCGTGAAGATCCTCAAAGACTTCCCTGAGGA...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp AAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGTCCACCGCGATGTCCTaGATGGTGCTGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KRQITSPTGPLASKTGSLSTAMS*MVLMVS
Trigger: AGACACCATCAGCACCATCAAGGACATCGCGGTGGA...CAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248899.11
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp AAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTAAGCGCTCCTCCAGCTaGCTCTGCAAAGCATGGAAC +
Preference number: 5 (lower is better)
Translates to: KETDYKPHGSISLKDRKSKRSSS*LCKAWN
Trigger: GTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCTT...AGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp TTCAGAGCTATGTCCTCTCTCTGGAACTCCCGCCTTGTGAGCTCCAGCAGGTCTATCACATCTCCAGCTTaGAAATTCAGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: FRAMSSLWNSRLVSSSRSITSPA*KFSSSL
Trigger: CAAACTGGAGCTGAATTTCAAAGCTGGAGATGTGAT...AGACCTGCTGGAGCTCACAAGGCGGGAGTTCCAGAGAGAGGACATAGCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397147.7
ENST00000625504.2
CDS-3UTR CAA 90 bp AGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTTGGCTTGTTACAGCATaGTGGCTCATCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RKRQITSPTGPLASKTGSWLVTA*WLIWEP
Trigger: TGGCTCCCAGATGAGCCACAATGCTGTAACAAGCCA...ACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397147.7
CDS-3UTR CAA 90 bp GTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGAAGCGCTCCTCCAGCTaGCTCTGCAAAGCATGGAAC +
Preference number: 5 (lower is better)
Translates to: VNSRKRQITSPTGPLASKKRSSS*LCKAWN
Trigger: GTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCTT...CTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp GATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCCTATCACATCTCCAGCTTaGAAATTCAGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: DYKPHGSISLKDRKSAHPITSPA*KFSSSL
Trigger: CAAACTGGAGCTGAATTTCAAAGCTGGAGATGTGAT...AGGATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp CAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCCATCATCACATCTCCAGCTTaGAAATTCAGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: QITSPTGPLASKTGSLPIITSPA*KFSSSL
Trigger: CAAACTGGAGCTGAATTTCAAAGCTGGAGATGTGAT...GATGGGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp GAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCAAAGACAGGAAGTCTGCCATCACATCTCCAGCTTaGAAATTCAGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ETDYKPHGSISLKDRKSAITSPA*KFSSSL
Trigger: CAAACTGGAGCTGAATTTCAAAGCTGGAGATGTGAT...GGCAGACTTCCTGTCTTTGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000650698.1
ENST00000650827.1
CDS-3UTR CAA 90 bp GATGTAAATAGTAGAAAGAGACAGATTACAAGCCCCACGGGTCCATTAGCCTCATCCACCGCGATGTCCTaGATGGTGCTGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: DVNSRKRQITSPTGPLASSTAMS*MVLMVS
Trigger: AGACACCATCAGCACCATCAAGGACATCGCGGTGGA...TGAGGCTAATGGACCCGTGGGGCTTGTAATCTGTCTCTTTCTACTATTTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248899.11
ENST00000650698.1
ENST00000650827.1
CDS CCA 72 bp GGCCCGCAGCTGCTGGGCCACAGCCATGGTGGGCGATaGTCCCAGGGAGCAGGTGGAGAGTCTCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GPQLLGHSHGGR*SQGAGGESRPA
Trigger: GGCTGGGCGAGACTCTCCACCTGCTCCCTGGGACCATCGCCCACCATGGCTGTGGCCCAGCAGCTGCGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
CDS CCA 72 bp TCTCGGAGCTGCCATGCGGTCAACGCTGTTGCCCTGTaGGGACACGCTCTTGACTTTCCGGGTGCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: SRSCHAVNAVAL*GHALDFPGARA
Trigger: CGCCCGCGCACCCGGAAAGTCAAGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CAA 72 bp GGGAGTGTGGGCAGGGTACAGGCCAGGGCACTGCTCTaGCTGTCTGGCCCGAAGCGCTCCTCCAGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: GSVGRVQARALL*LSGPKRSSSLL
Trigger: GAGCAAGCTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTACCCTGCCCACACTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS TCA 72 bp CGGGCGGAGCCGGCGGAGTGCCTGGGGCACCTGCTCTaGGTCATAGGGCGACTGGTAAAAGAAGATCCGGAC +
Preference number: 6 (lower is better)
Translates to: RAEPAECLGHLL*VIGRLVKEDPD
Trigger: GTCCGGATCTTCTTTTACCAGTCGCCCTATGACTCAGAGCAGGTGCCCCAGGCACTCCGCCGGCTCCGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS GCA 72 bp TCCGGAAGCTGTTCAAAGTCACTCTCGGCCCGCAGCTaGTGGGCCACAGCCATGGTGGGCGATGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SGSCSKSLSARS*WATAMVGDGPR
Trigger: CCTGGGACCATCGCCCACCATGGCTGTGGCCCAGCAGCTGCGGGCCGAGAGTGACTTTGAACAGCTTCCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000625504.2
ENST00000628938.2
CDS GCA 72 bp GGAGTGTGGGCAGGGTACAGGCCAGGGCACTGCTCTTaGTGTCTGGCCCGAAGCGCTCCTCCAGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: GVWAGYRPGHCS*CLARSAPPACS
Trigger: AGAGCAAGCTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTACCCTGCCCACACTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS GCA 72 bp CTTCACCTCGATGACGAAAACCTCTCGGCCCGCAGCTaGTGGGCCACAGCCATGGTGGGCGATGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LHLDDENLSARS*WATAMVGDGPR
Trigger: CCTGGGACCATCGCCCACCATGGCTGTGGCCCAGCAGCTGCGGGCCGAGAGGTTTTCGTCATCGAGGTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447071.5
ENST00000626011.2
CDS CCA 72 bp GGGCAGGGTACAGGCCAGGGCACTGCTCTTGCTGTCTaGCCCGAAGCGCTCCTCCAGCTTGCTCTGCAAAGC +
Preference number: 6 (lower is better)
Translates to: GQGTGQGTALAV*PEALLQLALQS
Trigger: GCTTTGCAGAGCAAGCTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCAGTGCCCTGGCCTGTACCCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CAA 72 bp GCCTCTGCTCTCGGAGCTGCCATGCGGTCAACGCTGTaGCCCTGTGGGGACACGCTCTTGACTTTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: ASALGAAMRSTL*PCGDTLLTFRV
Trigger: CACCCGGAAAGTCAAGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGAGCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CAA 90 bp TCAAATAGAGCCTCTGCTCTCGGAGCTGCCATGCGGTCAACGCTGTaGCCCTGTGGGGACACGCTCTTGACTTTCCGGGTGCGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: SNRASALGAAMRSTL*PCGDTLLTFRVRGR
Trigger: CCGCCCGCGCACCCGGAAAGTCAAGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCATGGCAGCTCCGAGAGCAGAGGCTCTATTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS GCA 72 bp TGCTCTTGCTGTCTGGCCCGAAGCGCTCCTCCAGCTTaGTCTGCAAAGCATGGAACTGGCGGTAGCGGCGGT +
Preference number: 6 (lower is better)
Translates to: CSCCLARSAPPA*SAKHGTGGSGG
Trigger: ACCGCCGCTACCGCCAGTTCCATGCTTTGCAGAGCAAGCTGGAGGAGCGCTTCGGGCCAGACAGCAAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CAA 90 bp GGAAAGGGGAATGAGGCTGGCCAGGCCACCCTGGACGTTGATGGCTaGTTACAGCATTGTGGCTCATCTGGGAGCCACTGGGGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: GKGNEAGQATLDVDG*LQHCGSSGSHWGLW
Trigger: CCAAAGCCCCCAGTGGCTCCCAGATGAGCCACAATGCTGTAACAAGCCATCAACGTCCAGGGTGGCCTGGCCAGCCTCATTCCCCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397147.7
ENST00000415063.2
ENST00000614157.1
ENST00000625504.2
ENST00000630049.1
CDS GCA 72 bp CACTACCGTCGTCTTGGGGTTCTAGAAAGTCCCCGCTaGGCGAACCTGCGCCCTCTCCTTGTACTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: HYRRLGVLESPR*ANLRPLLVLSA
Trigger: AGCAGAGAGTACAAGGAGAGGGCGCAGGTTCGCGCAGCGGGGACTTTCTAGAACCCCAAGACGACGGTAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651053.1
CDS CCA 72 bp GGCTTGTTACAGCATTGTGGCTCATCTGGGAGCCACTaGGGGCTTTGGAGTGGGAGAGGGACCCATGAGAAG +
Preference number: 6 (lower is better)
Translates to: GLLQHCGSSGSH*GLWSGRGTHEK
Trigger: CTTCTCATGGGTCCCTCTCCCACTCCAAAGCCCCCAGTGGCTCCCAGATGAGCCACAATGCTGTAACAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397147.7
ENST00000415063.2
ENST00000614157.1
ENST00000625504.2
ENST00000630049.1
CDS CAA 72 bp AATGAGGCTGGCCAGGCCACCCTGGACGTTGATGGCTaGTTACAGCATTGTGGCTCATCTGGGAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: NEAGQATLDVDG*LQHCGSSGSHW
Trigger: CCAGTGGCTCCCAGATGAGCCACAATGCTGTAACAAGCCATCAACGTCCAGGGTGGCCTGGCCAGCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397147.7
ENST00000415063.2
ENST00000614157.1
ENST00000625504.2
ENST00000630049.1
CDS GCA 72 bp CCGCTGCGCGAACCTGCGCCCTCTCCTTGTACTCTCTaGTTTGACCTTAAGCAGAACAATCCAGGCTCGCTT +
Preference number: 6 (lower is better)
Translates to: PLREPAPSPCTL*FDLKQNNPGSL
Trigger: AAGCGAGCCTGGATTGTTCTGCTTAAGGTCAAAGCAGAGAGTACAAGGAGAGGGCGCAGGTTCGCGCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651053.1
CDS CAA 72 bp GAAAGGGGAATGAGGCTGGCCAGGCCACCCTGGACGTaGATGGCTTGTTACAGCATTGTGGCTCATCTGGGA +
Preference number: 6 (lower is better)
Translates to: ERGMRLARPPWT*MACYSIVAHLG
Trigger: TCCCAGATGAGCCACAATGCTGTAACAAGCCATCAACGTCCAGGGTGGCCTGGCCAGCCTCATTCCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397147.7
ENST00000415063.2
ENST00000614157.1
ENST00000625504.2
ENST00000630049.1
CDS CAA 90 bp AGTCCCCGCTGCGCGAACCTGCGCCCTCTCCTTGTACTCTCTGCTTaGACCTTAAGCAGAACAATCCAGGCTCGCTTTCAGATAAGACCT +
Preference number: 6 (lower is better)
Translates to: SPRCANLRPLLVLSA*TLSRTIQARFQIRP
Trigger: AGGTCTTATCTGAAAGCGAGCCTGGATTGTTCTGCTTAAGGTCAAAGCAGAGAGTACAAGGAGAGGGCGCAGGTTCGCGCAGCGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651053.1
CDS GCA 72 bp TCATCCGGAAGCTGTTCAAAGTCACCTACATCCCAGTaGCCAGAACAGAGCCCGGCATACAGTAGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SSGSCSKSPTSQ*PEQSPAYSRCS
Trigger: TGAGCACCTACTGTATGCCGGGCTCTGTTCTGGGCACTGGGATGTAGGTGACTTTGAACAGCTTCCGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650698.1
ENST00000651053.1
CDS CAA 72 bp TGCGCGAACCTGCGCCCTCTCCTTGTACTCTCTGCTTaGACCTTAAGCAGAACAATCCAGGCTCGCTTTCAG +
Preference number: 6 (lower is better)
Translates to: CANLRPLLVLSA*TLSRTIQARFQ
Trigger: CTGAAAGCGAGCCTGGATTGTTCTGCTTAAGGTCAAAGCAGAGAGTACAAGGAGAGGGCGCAGGTTCGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651053.1
CDS TCA 72 bp TCTGCAAAGCATGGAACTGGCGGTAGCGGCGGTAGATaGGGTACTTGGATCCTCCTTTTGTCTTCACCTCGA +
Preference number: 6 (lower is better)
Translates to: SAKHGTGGSGGR*GTWILLLSSPR
Trigger: TCGAGGTGAAGACAAAAGGAGGATCCAAGTACCTCATCTACCGCCGCTACCGCCAGTTCCATGCTTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CAA 72 bp CTGGTGAAGCCTCTCTTCTCCTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCATCCGGAAGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: LVKPLFSSMSAM*AEMATSSGSCS
Trigger: TGAACAGCTTCCGGATGATGTTGCCATCTCGGCCAACATTGCTGACATCGAGGAGAAGAGAGGCTTCACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000614157.1
ENST00000625504.2
ENST00000628938.2
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CAA 90 bp ACAAAGTGGCTGGTGAAGCCTCTCTTCTCCTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCATCCGGAAGCTGTTCAAAGTCACTC +
Preference number: 6 (lower is better)
Translates to: TKWLVKPLFSSMSAM*AEMATSSGSCSKSL
Trigger: GAGTGACTTTGAACAGCTTCCGGATGATGTTGCCATCTCGGCCAACATTGCTGACATCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000614157.1
ENST00000625504.2
ENST00000628938.2
CDS CAA 90 bp ACAAAGTGGCTGGTGAAGCCTCTCTTCTCCTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCATCCGGAAGCTGTTCAAAGTCACCT +
Preference number: 6 (lower is better)
Translates to: TKWLVKPLFSSMSAM*AEMATSSGSCSKSP
Trigger: AGGTGACTTTGAACAGCTTCCGGATGATGTTGCCATCTCGGCCAACATTGCTGACATCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650698.1
ENST00000651053.1
CDS CAA 90 bp ACAAAGTGGCTGGTGAAGCCTCTCTTCTCCTCGATGTCAGCAATGTaGGCCGAGATGGCAACATCATCCGGAAGCTGTTCAAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: TKWLVKPLFSSMSAM*AEMATSSGSCSKSP
Trigger: TGGTGACTTTGAACAGCTTCCGGATGATGTTGCCATCTCGGCCAACATTGCTGACATCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650827.1
CDS CCA 72 bp CTCTCTTCTCCTCGATGTCAGCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCTGTTCAAAGTCACCAG +
Preference number: 6 (lower is better)
Translates to: LSSPRCQQCWPR*QHHPEAVQSHQ
Trigger: CTGGTGACTTTGAACAGCTTCCGGATGATGTTGCCATCTCGGCCAACATTGCTGACATCGAGGAGAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650827.1
CDS CCA 72 bp CTCTCTTCTCCTCGATGTCAGCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCTGTTCAAAGTCACTCT +
Preference number: 6 (lower is better)
Translates to: LSSPRCQQCWPR*QHHPEAVQSHS
Trigger: AGAGTGACTTTGAACAGCTTCCGGATGATGTTGCCATCTCGGCCAACATTGCTGACATCGAGGAGAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000614157.1
ENST00000625504.2
ENST00000628938.2
CDS CCA 72 bp CTCTCTTCTCCTCGATGTCAGCAATGTTGGCCGAGATaGCAACATCATCCGGAAGCTGTTCAAAGTCACCTA +
Preference number: 6 (lower is better)
Translates to: LSSPRCQQCWPR*QHHPEAVQSHL
Trigger: TAGGTGACTTTGAACAGCTTCCGGATGATGTTGCCATCTCGGCCAACATTGCTGACATCGAGGAGAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650698.1
ENST00000651053.1
CDS CAA 72 bp TTGATCCGACTGAGGAGGAAGATCACATCTCCAGCTTaGAAATTCAGCTCCAGTTTGCTGTTTCCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: LIRLRRKITSPA*KFSSSLLFPVK
Trigger: CTTCACTGGAAACAGCAAACTGGAGCTGAATTTCAAAGCTGGAGATGTGATCTTCCTCCTCAGTCGGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000415063.2
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000630049.1
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1
CDS CAA 90 bp CAGTCTTTGTTGATCCGACTGAGGAGGAAGATCACATCTCCAGCTTaGAAATTCAGCTCCAGTTTGCTGTTTCCAGTGAAGTCAAATAGA +
Preference number: 6 (lower is better)
Translates to: QSLLIRLRRKITSPA*KFSSSLLFPVKSNR
Trigger: TCTATTTGACTTCACTGGAAACAGCAAACTGGAGCTGAATTTCAAAGCTGGAGATGTGATCTTCCTCCTCAGTCGGATCAACAAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000248899.11
ENST00000397147.7
ENST00000415063.2
ENST00000447071.5
ENST00000614157.1
ENST00000625504.2
ENST00000626011.2
ENST00000628938.2
ENST00000630049.1
ENST00000650698.1
ENST00000650827.1
ENST00000651053.1