Pregenerated sensors for NBPF20 (Homo sapiens)

Ensembl gene IDs: ENSG00000162825

Ensembl transcript IDs: ENST00000369373.9, ENST00000392971.6

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CAA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTGGAAACTCACAGCATaGTCTCTGCAGTGTTCCCGG	+
Preference number: 3 (lower is better) Translates to: RFPKYFFIISKVSLKGTDWKLTA*SLQCSR Trigger: CCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6
CDS-3UTR TCA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCCAGCAGCTCCCTGCTaGGCCTGGGACCTGTTGCCT	+
Preference number: 4 (lower is better) Translates to: RFPKYFFIISKVSLKGTDPAAPC*AWDLLP Trigger: AGGCAACAGGTCCCAGGCTCAGCAGGGAGCTGCTGG...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369373.9
CDS-3UTR TCA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCCAGCAGCTCCCTGCTaGGCCTGGGGCATGATGGGT	+
Preference number: 4 (lower is better) Translates to: RFPKYFFIISKVSLKGTDPAAPC*AWGMMG Trigger: ACCCATCATGCCCCAGGCTCAGCAGGGAGCTGCTGG...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6
CDS-3UTR TCA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCCATCAGCACGCCGTTaGGCCTGGGGCATGGTGGGT	+
Preference number: 4 (lower is better) Translates to: RFPKYFFIISKVSLKGTDPSARR*AWGMVG Trigger: ACCCACCATGCCCCAGGCTCAACGGCGTGCTGATGG...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6
CDS-3UTR TCA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTGCCCGCAGATGGGCTaGGGTTGGAAACTCACAGCA	+
Preference number: 4 (lower is better) Translates to: RFPKYFFIISKVSLKGTDCPQMG*GWKLTA Trigger: TGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6
CDS-3UTR GCA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTCACAGCATTGTCTCTaGAGTGTTCCCGGCAAAACG	+
Preference number: 4 (lower is better) Translates to: RFPKYFFIISKVSLKGTDSQHCL*SVPGKT Trigger: CGTTTTGCCGGGAACACTGCAGAGACAATGCTGTGA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6
CDS-3UTR TCA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCCAAGTAACCAGTCCTaGTATCATAATGGTGATGGA	+
Preference number: 4 (lower is better) Translates to: RFPKYFFIISKVSLKGTDPSNQS*YHNGDG Trigger: TCCATCACCATTATGATATCAGGACTGGTTACTTGG...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6
CDS-3UTR TCA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATGGATATTTATACTCTTaGAAACCGCTTTCCCAAGTA	+
Preference number: 4 (lower is better) Translates to: RFPKYFFIISKVSLKGTDGYLYS*KPLSQV Trigger: TACTTGGGAAAGCGGTTTTCAAGAGTATAAATATCC...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6
CDS-3UTR CAA 90 bp	CGCTTTCCCAAGTACTTCTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTTGCACTCTTCATATTaGTATTTCTTCTGCTGGTTG	+
Preference number: 5 (lower is better) Translates to: RFPKYFFIISKVSLKGTDLHSSY*YFFCWL Trigger: CAACCAGCAGAAGAAATACAAATATGAAGAGTGCAA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGAAGTACTTGGGAAAGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369373.9 ENST00000392971.6