Pregenerated sensors for NBPF14 (Homo sapiens)

Ensembl gene IDs: ENSG00000270629

Ensembl transcript IDs: ENST00000614999.4, ENST00000619423.4

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	TCTGCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTaGAGTGTTCCTGGCAAAACGTTTAGGCTGAATTTAATCATGAAG	+
Preference number: 1 (lower is better) Translates to: SARRWAEVGNSQHCL*SVPGKTFRLNLIMK Trigger: CTTCATGATTAAATTCAGCCTAAACGTTTTGCCAGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614999.4 ENST00000619423.4
3UTR CAA 72 bp	CAAACTAGACCTTCTCTGCCCGCAGATGGGCTGAGGTaGGAAACTCACAGCATTGTCTCTGCAGTGTTCCTG	+
Preference number: 4 (lower is better) Translates to: QTRPSLPADGLR*ETHSIVSAVFL Trigger: CAGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAAGGTCTAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614999.4 ENST00000619423.4

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu