RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NBAS (Homo sapiens)

Ensembl gene IDs: ENSG00000151779

Ensembl transcript IDs: ENST00000281513.10, ENST00000417461.5, ENST00000423602.1, ENST00000427792.1, ENST00000429842.1, ENST00000433283.5, ENST00000441755.5, ENST00000442506.5, ENST00000485694.1

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCGTAGTGACTGCCGTGATTTGCTCCAGTGCCATCTCGTGCAGATaGTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATGGAAGCAGG +
Preference number: 1 (lower is better)
Translates to: TVVTAVICSSAISCR*SSRLSRRSFRDGSR
Trigger: CCTGCTTCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR CCA 90 bp CTCGTGCAGATGCTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATaGAAGCAGGAGGGACTGGTTAAGCAGCAGCAGACACAGCTCCTT +
Preference number: 1 (lower is better)
Translates to: LVQMLISALEEKFQR*KQEGLVKQQQTQLL
Trigger: AAGGAGCTGTGTCTGCTGCTGCTTAACCAGTCCCTCCTGCTTCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR GCA 90 bp TCATTCACCGTAGTGACTGCCGTGATTTGCTCCAGTGCCATCTCGTaGAGATGCTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATGGA +
Preference number: 1 (lower is better)
Translates to: SFTVVTAVICSSAIS*RCSSRLSRRSFRDG
Trigger: TCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGTGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR GCA 90 bp ACAATTGGAATCATTCACCGTAGTGACTGCCGTGATTTGCTCCAGTaGCATCTCGTGCAGATGCTCATCTCGGCTCTCGAGGAGAAGTTT +
Preference number: 1 (lower is better)
Translates to: TIGIIHRSDCRDLLQ*HLVQMLISALEEKF
Trigger: AAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGTGAATGATTCCAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR CCA 90 bp TTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTaGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: LLEPWRTIGRYTCCF*EQHSTPDAFSAKEQ
Trigger: CTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
3UTR GCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTaGTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAG +
Preference number: 1 (lower is better)
Translates to: CNLLEPWRTIGRYTC*FWEQHSTPDAFSAK
Trigger: CTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
3UTR-3UTR TCA 90 bp AGAAGGGAGTGGAGACACACTTCACCAGCAGCTTGGCATCCAGGAGCAGGGAAAAATTCAGCCTCGTGGTaGCTAGATTCCAGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: RREWRHTSPAAWHPGAGKNSASW*LDSRSS
Trigger: GGAACTCCTGGAATCTAGTCACCACGAGGCTGAATT...TTTCCCTGCTCCTGGATGCCAAGCTGCTGGTGAAGTGTGTCTCCACTCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR-3UTR CCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTTATTTGCAATTTGTTaGAACCATGGAGAACAATCG +
Preference number: 2 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFLFAIC*NHGEQS
Trigger: CGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
3UTR-3UTR CCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTATTTGCAATTTGTTaGAACCATGGAGAACAATCG +
Preference number: 2 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMLFAIC*NHGEQS
Trigger: CGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
3UTR GCA 72 bp GTAGTGACTGCCGTGATTTGCTCCAGTGCCATCTCGTaGAGATGCTCATCTCGGCTCTCGAGGAGAAGTTTC +
Preference number: 3 (lower is better)
Translates to: VVTAVICSSAIS*RCSSRLSRRSF
Trigger: GAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR GCA 72 bp ACTGCCGTGATTTGCTCCAGTGCCATCTCGTGCAGATaGTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: TAVICSSAISCR*SSRLSRRSFRD
Trigger: ATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR CCA 72 bp ATGCTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATaGAAGCAGGAGGGACTGGTTAAGCAGCAGCAGACA +
Preference number: 3 (lower is better)
Translates to: MLISALEEKFQR*KQEGLVKQQQT
Trigger: TGTCTGCTGCTGCTTAACCAGTCCCTCCTGCTTCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR-3UTR CAA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGCGGCAGATACACATGTaGCTTCTGGGAACAGCATTC +
Preference number: 3 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRRQIHM*LLGTAF
Trigger: GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCG...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
3UTR GCA 72 bp CAATTGGAATCATTCACCGTAGTGACTGCCGTGATTTaGTCCAGTGCCATCTCGTGCAGATGCTCATCTCGG +
Preference number: 3 (lower is better)
Translates to: QLESFTVVTAVI*SSAISCRCSSR
Trigger: CCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGTGAATGATTCCAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR-3UTR CAA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGAGTTCTTGGTCACAATaGGAATCATTCACCGTAGTG +
Preference number: 3 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRSSWSQ*ESFTVV
Trigger: CACTACGGTGAATGATTCCAATTGTGACCAAGAACT...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417461.5
3UTR TCA 72 bp ATTAAGGTCATCATAGCCTGGAGTCTGGTGAAATTGTaGAAACAGCTGTGGATTATATCAAGATTCATCGCA +
Preference number: 3 (lower is better)
Translates to: IKVIIAWSLVKL*KQLWIISRFIA
Trigger: TGCGATGAATCTTGATATAATCCACAGCTGTTTTCACAATTTCACCAGACTCCAGGCTATGATGACCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
3UTR GCA 72 bp ACAGCTGTGGATTATATCAAGATTCATCGCATCAACTaGCATCTTCCCACTTACTCTTCATTCATCTACTTA +
Preference number: 3 (lower is better)
Translates to: TAVDYIKIHRIN*HLPTYSSFIYL
Trigger: TAAGTAGATGAATGAAGAGTAAGTGGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
3UTR-3UTR CAA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATCTCACCCATGGATTATaGGTTATGACATATTCACTT +
Preference number: 3 (lower is better)
Translates to: TVLFAICWNHGEQSADTHLTHGL*VMTYSL
Trigger: AAGTGAATATGTCATAACCAATAATCCATGGGTGAG...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR TCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGTTCTGAAGGCCTGGTaGGTCCCCCTCACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPVLKAW*VPLTAR
Trigger: TCTGGCCGTGAGGGGGACTCACCAGGCCTTCAGAAC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGTCTGCAGCACGTGAATaGGGGGCCGCACCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWSAARE*GAAPAR
Trigger: CCTGGCCGGTGCGGCCCCGCATTCACGTGCTGCAGA...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCCCATCACTGACGGCCTaGAGCACCGCTTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPPSLTA*STALVV
Trigger: CACCACCAAAGCGGTGCTGCAGGCCGTCAGTGATGG...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGCCTCCCGCAGGTGTCTaGCCAGCTCCTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRPPAGV*PAPLHP
Trigger: GGGATGCAGAGGAGCTGGGCAGACACCTGCGGGAGG...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCGGCCCTCACACCCAGTaGTGTGCTGCGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSGPHTQ*CAARRA
Trigger: AGCCCTCCGCGCAGCACAGCACTGGGTGTGAGGGCC...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGCTACCCGTCTCCACTaGGGTTTCGGGTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPATRLH*GFGSFG
Trigger: TCCGAAAGACCCGAAACCCCAGTGGAGACGGGTAGC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp AGAAGGGAGTGGAGACACACTTCACCAGCAGCTTGGCATCCAGGAGCAGGGAAACTCCTTCACACCCTCTaGAGGCAGCATCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RREWRHTSPAAWHPGAGKLLHTL*RQHLLG
Trigger: ACCAAGCAGATGCTGCCTGCAGAGGGTGTGAAGGAG...TTTCCCTGCTCCTGGATGCCAAGCTGCTGGTGAAGTGTGTCTCCACTCCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGTTCCTCTGGTGTCGTaGAGCGCAAACTCACAAGGC +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPVPLVS*SANSQG
Trigger: GCCTTGTGAGTTTGCGCTCCACGACACCAGAGGAAC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCCGGCTTCGGCTTCATaGCCGGCCTCCCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHPASAS*PASRRC
Trigger: ACACCTGCGGGAGGCCGGCCATGAAGCCGAAGCCGG...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCCGGCTTCGGCTTCATaGCCGGCCTCCCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSIPASAS*PASRRC
Trigger: ACACCTGCGGGAGGCCGGCCATGAAGCCGAAGCCGG...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGAGCAGGGCCACAGGTaGCCCTCACACCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAEQGHR*PSHPVL
Trigger: CAGCACTGGGTGTGAGGGCCACCTGTGGCCCTGCTC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTACTCAAAGCCGGCCCTaGCTCGGGGGCCGCCATGTT +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSITQSRP*LGGRHV
Trigger: AACATGGCGGCCCCCGAGTCAGGGCCGGCTTTGAGT...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGTTCTGAAGGCCTGGTaGGTCCCCCTCACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAVLKAW*VPLTAR
Trigger: TCTGGCCGTGAGGGGGACTCACCAGGCCTTCAGAAC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCAGAACACGAGGAGCTTaGTGTCCTCCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPRTRGA*CPPQSG
Trigger: ACCTGACTGAGGAGGACAGCAAGCTCCTCGTGTTCT...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCATCCCAGCGCCCTTaGTGGAGGCTAGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRASQRP*WRLAKR
Trigger: CCTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGATGC...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCGCATCCCAGCGCCCTTaGTGGAGGCTAGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFASQRP*WRLAKR
Trigger: CCTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGATGC...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGGCCCTCACACCCAGTaGTGTGCTGCGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWGPHTQ*CAARRA
Trigger: AGCCCTCCGCGCAGCACAGCACTGGGTGTGAGGGCC...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGCCGGCTTCGGCTTCATaGCCGGCCTCCCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWPASAS*PASRRC
Trigger: ACACCTGCGGGAGGCCGGCCATGAAGCCGAAGCCGG...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CGTGCAGATGCTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATGGAAGCAGGAACCCCTTGTCCACACTaGCGTGGACTGCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: RADAHLGSRGEVSEMEAGTPCPH*RGLLQQ
Trigger: TTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGGT...TCCTGCTTCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR TCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATAAAATCTGCAGCACGTaGATGCGGGGCCGCACCGGC +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHKICST*MRGRTG
Trigger: GCCGGTGCGGCCCCGCATTCACGTGCTGCAGATTTT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCCTCACCCTCTGCAGTaGCTGGACTCAAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHPHPLQ*LDSKPA
Trigger: GGCCGGCTTTGAGTCCAGGCACTGCAGAGGGTGAGG...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGCAGTGTCTTCGGTACTaGAGTAACCCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRQCLRY*SNPVST
Trigger: GGTGGAGACGGGGTTACTGCAGTACCGAAGACACTG...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACTGGCGTGGACTGCTaGAACAACACCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRATGVDC*NNTFQD
Trigger: GTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGT...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGACTGGCGTGGACTGCTaGAACAACACCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRTGVDC*NNTFQD
Trigger: GTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGT...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGCTCCTTCACACCCTCTaGAGGCAGCATCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRLLHTL*RQHLLG
Trigger: ACCAAGCAGATGCTGCCTGCAGAGGGTGTGAAGGAG...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACACCTCCCGCAGGTGTCTaGCCAGCTCCTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTPPAGV*PAPLHP
Trigger: GGGATGCAGAGGAGCTGGGCAGACACCTGCGGGAGG...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCAGCAACGTTGACCGCTaGCTTCCTCCACTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFSNVDR*LPPLPL
Trigger: CAGAGGCAGTGGAGGAAGTCAGCGGTCAACGTTGCT...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGAGATCTAGCTCCTCTTaGATGGCAGGGGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRRSSSS*MAGGLS
Trigger: AGACAGACCCCCTGCCATTCAAGAGGAGCTAGATCT...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGTGGCCATCAGCTCCTaGCAATGCATACTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATVAISS*QCILAA
Trigger: AGCAGCCAGTATGCATTGTCAGGAGCTGATGGCCAC...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCGATGGCACTTGTCCCTaGAACATGGGGCCAATCGGG +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSDGTCP*NMGPIG
Trigger: CCCGATTGGCCCCATGTTTCAGGGACAAGTGCCATC...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCATGAAGCCACTCCGGTaGAGAGCCTGGGACTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRAMKPLR*RAWDLF
Trigger: AAACAAGTCCCAGGCTCTTCACCGGAGTGGCTTCAT...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp CTCTCGAGGAGAAGTTTCAGAGATGGAAGCAGGAGGGACTGGTTAAGCAGCAGCCACTATATCCTTGGGTaGGATGTCAAGAGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LSRRSFRDGSRRDWLSSSHYILG*DVKRAN
Trigger: GTTGGCCCTCTTGACATCTCACCCAAGGATATAGTG...GCTGCTGCTTAACCAGTCCCTCCTGCTTCCATCTCTGAAACTTCTCCTCGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR TCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCCAGCAGGTCCTCAGGTaGAACCAGCTCCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSQQVLR*NQLLTL
Trigger: AAGGGTGAGGAGCTGGTTTCACCTGAGGACCTGCTG...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCGACTTCTTCCACCACTaGCCATCACTGACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFDFFHH*PSLTAC
Trigger: GCAGGCCGTCAGTGATGGGCAGTGGTGGAAGAAGTC...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CTCTCGAGGAGAAGTTTCAGAGATGGAAGCAGGAGGGACTGGTTAAGCAGCAGCCACCAAGGTCAGCACTaGCACCACTCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSRRSFRDGSRRDWLSSSHQGQH*HHSMQK
Trigger: TTTCTGCATTGAGTGGTGGCAGTGCTGACCTTGGTG...GCTGCTGCTTAACCAGTCCCTCCTGCTTCCATCTCTGAAACTTCTCCTCGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR GCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCGTGATTTGCTCCAGTaGCATCTCGTGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWRDLLQ*HLVQML
Trigger: GAGCATCTGCACGAGATGGCACTGGAGCAAATCACG...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCCCAGCGCCCTTaGTGGAGGCTAGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTASQRP*WRLAKR
Trigger: CCTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGATGC...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGCCTCCCGCAGGTGTCTaGCCAGCTCCTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLPPAGV*PAPLHP
Trigger: GGGATGCAGAGGAGCTGGGCAGACACCTGCGGGAGG...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCACCCAGTGCTGTGCTaGGCGGAGGGCTGTACTGAA +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSIHPVLC*AEGCTE
Trigger: TTCAGTACAGCCCTCCGCGCAGCACAGCACTGGGTG...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTACTTCAGTCTCCGGTaGCCACTCGGTGTTGACCAA +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRYFSLR*PLGVDQ
Trigger: TTGGTCAACACCGAGTGGCCACCGGAGACTGAAGTA...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCAGTGATGAGGTCACCTaGGTGGAGACGATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPSDEVT*VETIKV
Trigger: TACTTTGATCGTCTCCACCCAGGTGACCTCATCACT...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCGAAAGGATGAAGCTGTaGCTCAGGGTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRAERMKL*LRVSRW
Trigger: CCACCTGGAAACCCTGAGCCACAGCTTCATCCTTTC...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGTTCCAGGACCTTCAGTaGGTCCCTTGGCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRFQDLQ*VPWPTK
Trigger: CTTGGTGGGCCAAGGGACCCACTGAAGGTCCTGGAA...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACTCCCAGCGCCCTTGCTaGAGGCTAGCCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNSQRPC*RLAKRW
Trigger: CCACCTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGA...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTCCGGCTTCGGCTTCATaGCCGGCCTCCCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASPASAS*PASRRC
Trigger: ACACCTGCGGGAGGCCGGCCATGAAGCCGAAGCCGG...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGGTGGCCACTCGGTGTTaGCCAACAAGTCATAGAGAA +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWVATRC*PTSHRE
Trigger: TTCTCTATGACTTGTTGGTCAACACCGAGTGGCCAC...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTACTCTTTTCGTAGCTaGCCCTGTAGTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRYSFRS*PCSGVS
Trigger: GGAAACCCCACTACAGGGTCAGCTACGAAAAGAGTA...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAAAAGCCATGAGCTCTTaGCGAGTGGCCAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAKAMSS*RVAKSW
Trigger: CCAGGACTTGGCCACTCGTCAAGAGCTCATGGCTTT...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGTCAAAGCAAAAGCCATaGGCTCTTGACGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWSKQKP*ALDEWP
Trigger: TGGCCACTCGTCAAGAGCTCATGGCTTTTGCTTTGA...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGACCACTGCCCATCACTaGCGGCCTGCAGCACCGCTT +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLTTAHH*RPAAPL
Trigger: AAGCGGTGCTGCAGGCCGTCAGTGATGGGCAGTGGT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCTTGACCATGTGCTGGTaGAAGGCTTCTGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRALTMCW*KASGSV
Trigger: GACTGATCCAGAAGCCTTTCACCAGCACATGGTCAA...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCTTCCAGGTGGGCAAGTaGTTTCTCCAGATGATTCAA +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPFQVGK*FLQMIQ
Trigger: TTGAATCATCTGGAGAAATCACTTGCCCACCTGGAA...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGAATTCAGCCTCGTGGTaGCTAGATTCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRNSASW*LDSRSS
Trigger: GGAACTCCTGGAATCTAGTCACCACGAGGCTGAATT...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAAGTTCTGAAGGCCTGGTaGGTCCCCCTCACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEVLKAW*VPLTAR
Trigger: TCTGGCCGTGAGGGGGACTCACCAGGCCTTCAGAAC...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTTCTGGGTTCTCACCTaGAACCCTCAGCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFFWVLT*NPQQLS
Trigger: GCTGAGCTGCTGAGGGTTGCAGGTGAGAACCCAGAA...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTGGGTTCTCACCTaGAACCCTCAGCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAFWVLT*NPQQLS
Trigger: GCTGAGCTGCTGAGGGTTGCAGGTGAGAACCCAGAA...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTGACTTCTTCCACCACTaGCCATCACTGACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSIDFFHH*PSLTAC
Trigger: GCAGGCCGTCAGTGATGGGCAGTGGTGGAAGAAGTC...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCTCTGCAGTAAACCGCTaGACGTCCACACCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSSAVNR*TSTPFR
Trigger: TCGGAAGGGTGTGGACGTGCAGCGGTTTACTGCAGA...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCCACACTGGCGTGGACTaGTGCAACAACACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSHTGVD*CNNTFQ
Trigger: CTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTG...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTTCTGCAGCACGTGAATaGGGGGCCGCACCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLSAARE*GAAPAR
Trigger: CCTGGCCGGTGCGGCCCCGCATTCACGTGCTGCAGA...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGTGACTGCCGTGATTTaGTCCAGTGCCATCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAVTAVI*SSAISC
Trigger: GCACGAGATGGCACTGGAGCAAATCACGGCAGTCAC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCATTCACCGTAGTGACTaGCGTGATTTGCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRAIHRSD*RDLLQC
Trigger: GCACTGGAGCAAATCACGGCAGTCACTACGGTGAAT...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACGGCCCTCACACCCAGTaGTGTGCTGCGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYGPHTQ*CAARRA
Trigger: AGCCCTCCGCGCAGCACAGCACTGGGTGTGAGGGCC...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGATGCACCATGTTTTTaGTTGCCTCTAGGCTGTACT +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPDAPCF*LPLGCT
Trigger: AGTACAGCCTAGAGGCAACCAAAAACATGGTGCATC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCCAGGAGCATCCCATCTaGAGAAAGGCTCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPQEHPI*RKAHLK
Trigger: TTTAAGATGAGCCTTTCTCCAGATGGGATGCTCCTG...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCCTTCCACAGACAGCTTaGTCACAGCTTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPLPQTA*SQLLEK
Trigger: TTTCTCCAAAAGCTGTGACCAAGCTGTCTGTGGAAG...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCGTGGATAGAAGGGAGTaGAGACACACTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRAVDRRE*RHTSPA
Trigger: TGCTGGTGAAGTGTGTCTCCACTCCCTTCTATCCAC...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGGTGGATAGAAGGGAGTaGAGACACACTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRVDRRE*RHTSPA
Trigger: TGCTGGTGAAGTGTGTCTCCACTCCCTTCTATCCAC...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCGATGCTCAGTTTCCCTaGGAAGTGAATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFDAQFP*EVNGCQ
Trigger: CTGGCAGCCATTCACTTCTCAGGGAAACTGAGCATC...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCAAAGCTCTGACACACTaGGAATTTGTTCCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPKALTH*EFVPVG
Trigger: ACCAACTGGAACAAATTCTCAGTGTGTCAGAGCTTT...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACATCCAATGAGACTCACTaGCAGGAGGCTGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTSNETH*QEAASG
Trigger: GCCGGAAGCAGCCTCCTGTCAGTGAGTCTCATTGGA...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGCTGTAGTTCCGATTTaGTATGCACCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPAVVPI*YAPPHF
Trigger: AAAATGTGGTGGTGCATATCAAATCGGAACTACAGC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGGATCTGCGCCTGAGTaGAATCCAGGAGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRGSAPE*NPGDVH
Trigger: ATGAACGTCTCCTGGATTTCACTCAGGCGCAGATCC...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTCTTCAGAGAAAGGATaGAGCTGTGGCTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRSSEKG*SCGSGF
Trigger: AAACCCTGAGCCACAGCTTCATCCTTTCTCTGAAGA...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTAAAATCTGCAGCACGTaGATGCGGGGCCGCACCGGC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASKICST*MRGRTG
Trigger: GCCGGTGCGGCCCCGCATTCACGTGCTGCAGATTTT...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCTCAGTCAGGTGAAATaGTTGCCCCAAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWLSQVK*LPQNLQ
Trigger: CTGCAGATTTTGGGGCAATCATTTCACCTGACTGAG...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGAACAAGCACTGCAGTaGATCATCTGTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSREQALQ*IICPAR
Trigger: CCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTC...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACCATCACTGACGGCCTaGAGCACCGCTTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEPSLTA*STALVV
Trigger: CACCACCAAAGCGGTGCTGCAGGCCGTCAGTGATGG...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTGCAGTAAACCGCTaGACGTCCACACCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHSAVNR*TSTPFR
Trigger: TCGGAAGGGTGTGGACGTGCAGCGGTTTACTGCAGA...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGACACTGTAACGTTGTaGCAGAGAAATAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPDTVTL*QRNSNA
Trigger: AGCATTGCTATTTCTCTGGCACAACGTTACAGTGTC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CCCAATCCTTCCTTGTTCTCCATCGTACATCTGGTTAGCATCACTGTAGCTAGTCACACTGGCGTGGACTaGTGCAACAACACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PNPSLFSIVHLVSITVASHTGVD*CNNTFQ
Trigger: CTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTG...ACTAGCTACAGTGATGCTAACCAGATGTACGATGGAGAACAAGGAAGGATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR GCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCTCCTTCACACCCTCTaGAGGCAGCATCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHLLHTL*RQHLLG
Trigger: ACCAAGCAGATGCTGCCTGCAGAGGGTGTGAAGGAG...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCCAGTGCCATCTCGTaGAGATGCTCATCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHSSAIS*RCSSRL
Trigger: GAGCCGAGATGAGCATCTGCACGAGATGGCACTGGA...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAGGCCCTCACACCCAGTaGTGTGCTGCGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTGPHTQ*CAARRA
Trigger: AGCCCTCCGCGCAGCACAGCACTGGGTGTGAGGGCC...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATGGGCGTTTCCGTGGTaGTGCAAATCGCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAWAFPW*CKSLHF
Trigger: GAAATGGAGCGATTTGCACCACCACGGAAACGCCCA...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGATCTGTCCAGCCAGGTaGATGTTTTCAAGGCGACTA +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRICPAR*MFSRRL
Trigger: TAGTCGCCTTGAAAACATCCACCTGGCTGGACAGAT...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGACTTCTGTAACCAGATaGTGTACAGAGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRTSVTR*CTESLG
Trigger: CCCCAAGCTCTCTGTACACCATCTGGTTACAGAAGT...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCGAAAGGATGAAGCTGTaGCTCAGGGTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSERMKL*LRVSRW
Trigger: CCACCTGGAAACCCTGAGCCACAGCTTCATCCTTTC...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACATTCCAGGACCTTCAGTaGGTCCCTTGGCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTFQDLQ*VPWPTK
Trigger: CTTGGTGGGCCAAGGGACCCACTGAAGGTCCTGGAA...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCAGGCAGCATCTGCTTaGTGTTATACAAAGAGCGAC +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWQAASA*CYTKSD
Trigger: GTCGCTCTTTGTATAACACCAAGCAGATGCTGCCTG...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGGAGCAGGGCCACAGGTaGCCCTCACACCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMEQGHR*PSHPVL
Trigger: CAGCACTGGGTGTGAGGGCCACCTGTGGCCCTGCTC...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACGAGCAGGGCCACAGGTaGCCCTCACACCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYEQGHR*PSHPVL
Trigger: CAGCACTGGGTGTGAGGGCCACCTGTGGCCCTGCTC...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
3UTR CAA 72 bp ACAATTGGAATCATTCACCGTAGTGACTGCCGTGATTaGCTCCAGTGCCATCTCGTGCAGATGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: TIGIIHRSDCRD*LQCHLVQMLIS
Trigger: CGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGTGAATGATTCCAATTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR TCA 90 bp AGAGAGCCTCCAATCAGGATTAAGGTCATCATAGCCTGGAGTCTGGTGAAATTGAGTTTCCCTGAGAAGTaGATGGCTGCCAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: REPPIRIKVIIAWSLVKLSFPEK*MAARSI
Trigger: GATGCTCCTGGCAGCCATTCACTTCTCAGGGAAACT...CAATTTCACCAGACTCCAGGCTATGATGACCTTAATCCTGATTGGAGGCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR TCA 90 bp AGTAGAGAGCCTCCAATCAGGATTAAGGTCATCATAGCCTGGAGTCTGGTGAAAGATGCTCAGTTTCCCTaGGAAGTGAATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SREPPIRIKVIIAWSLVKDAQFP*EVNGCQ
Trigger: CTGGCAGCCATTCACTTCTCAGGGAAACTGAGCATC...TTTCACCAGACTCCAGGCTATGATGACCTTAATCCTGATTGGAGGCTCTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR TCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATAGCAACGTTCTCCAATaGGACTCACTGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHSNVLQ*DSLTGG
Trigger: GCCTCCTGTCAGTGAGTCTCATTGGAGAACGTTGCT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATACTCTTTTCGTAGCTaGCCCTGTAGTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAYSFRS*PCSGVS
Trigger: GGAAACCCCACTACAGGGTCAGCTACGAAAAGAGTA...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTACCACTGCCCATCACTaGCGGCCTGCAGCACCGCTT +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLTTAHH*RPAAPL
Trigger: AAGCGGTGCTGCAGGCCGTCAGTGATGGGCAGTGGT...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATGGATCTGCGCCTGAGTaGAATCCAGGAGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHGSAPE*NPGDVH
Trigger: ATGAACGTCTCCTGGATTTCACTCAGGCGCAGATCC...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGTACTGCAGCCTTTCGTaGTCAAAGCCACCAATAGTA +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWYCSLS*SKPPIV
Trigger: TACTATTGGTGGCTTTGATCACGAAAGGCTGCAGTA...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCAAGTTTCTCTTTTTCTaGTCGGGACAGATCATAGAG +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPKFLFF*SGQIIE
Trigger: CTCTATGATCTGTCCCGATCAGAAAAAGAGAAACTT...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCCACTATATCCTTGGGTaGGATGTCAAGAGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSHYILG*DVKRAN
Trigger: GTTGGCCCTCTTGACATCTCACCCAAGGATATAGTG...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGAATTCAGCCTCGTGGTaGCTAGATTCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRNSASW*LDSRSS
Trigger: GGAACTCCTGGAATCTAGTCACCACGAGGCTGAATT...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCGTTTCCGTGGTGGTaGAAATCGCTCCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRAFPWW*KSLHFS
Trigger: ACTGAAATGGAGCGATTTGCACCACCACGGAAACGC...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGATGCTCTATTTCCTCTaGTCTGGTCTGATACCAGTC +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWMLYFL*SGLIPV
Trigger: GACTGGTATCAGACCAGAGCAGAGGAAATAGAGCAT...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTCATGTCGAGTCACATaGCTGGTGACCATCTTGATT +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRSCRVT*LVTILI
Trigger: AATCAAGATGGTCACCAGGCATGTGACTCGACATGA...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACACTGGCGTGGACTGCTaGAACAACACCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNTGVDC*NNTFQD
Trigger: GTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGT...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGATTCACCGTAGTGACTaGCGTGATTTGCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRIHRSD*RDLLQC
Trigger: GCACTGGAGCAAATCACGGCAGTCACTACGGTGAAT...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCACCGTAGTGACTaGCGTGATTTGCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSIHRSD*RDLLQC
Trigger: GCACTGGAGCAAATCACGGCAGTCACTACGGTGAAT...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACGCATCCCAGCGCCCTTaGTGGAGGCTAGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYASQRP*WRLAKR
Trigger: CCTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGATGC...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACATCCCCGCCTTTCTTCTaGGTTCTCACCTGCAACCCT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTSPPFF*VLTCNP
Trigger: AGGGTTGCAGGTGAGAACCCAGAAGAAAGGCGGGGA...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCTGACAATGCATACTaGCTGCTTTGTAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWPDNAY*LLCSHG
Trigger: TCCATGACTACAAAGCAGCCAGTATGCATTGTCAGG...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCGGTGTACAGAGAGCTTaGGGAAAGCATCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFGVQRA*GKHLSI
Trigger: GATGGACAGATGCTTTCCCCAAGCTCTCTGTACACC...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCACTCAGGGTTTCCAGGTaGGCAAGTGATTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTALRVSR*ASDFSR
Trigger: TCTGGAGAAATCACTTGCCCACCTGGAAACCCTGAG...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACACACCCTTGTCCACACTaGCGTGGACTGCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTHPCPH*RGLLQQ
Trigger: TTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGTG...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACCACCCTTGTCCACACTaGCGTGGACTGCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNHPCPH*RGLLQQ
Trigger: TTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGTG...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACACAGGCAGCATCTGCTTaGTGTTATACAAAGAGCGAC +
Preference number: 4 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATQAASA*CYTKSD
Trigger: GTCGCTCTTTGTATAACACCAAGCAGATGCTGCCTG...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTTCCCAGCGCCCTTGCTaGAGGCTAGCCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLSQRPC*RLAKRW
Trigger: CCACCTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGA...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTCCCAGCGCCCTTGCTaGAGGCTAGCCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCSQRPC*RLAKRW
Trigger: CCACCTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGA...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACGAGCAGGGCCACAGGTaGCCCTCACACCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHEQGHR*PSHPVL
Trigger: CAGCACTGGGTGTGAGGGCCACCTGTGGCCCTGCTC...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCAATTTGTTGGAACCATaGAGAACAATCGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPNLLEP*RTIGRY
Trigger: GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACATGTCTGCCCACCAATTaGCATCTATCAGTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATCLPTN*HLSVGK
Trigger: TTTACCCACTGATAGATGTCAATTGGTGGGCAGACA...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGAAAGCTCTGACACACTaGGAATTTGTTCCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWKALTH*EFVPVG
Trigger: ACCAACTGGAACAAATTCTCAGTGTGTCAGAGCTTT...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCTTTTTCCAAAAGCTCTaGCACACTGAGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPFFQKL*HTENLF
Trigger: GAACAAATTCTCAGTGTGTCAGAGCTTTTGGAAAAA...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGAGATCTAGCTCCTCTTaGATGGCAGGGGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWRSSSS*MAGGLS
Trigger: AGACAGACCCCCTGCCATTCAAGAGGAGCTAGATCT...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCTTTTCCCCTCCTTCATaGTGGATCTGGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRAFSPPS*WIWKFT
Trigger: AGTGAATTTCCAGATCCATCATGAAGGAGGGGAAAA...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAACTTGTTTAATGAGATaGGGGTCTCCAGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATTCLMR*GSPVQN
Trigger: GTTCTGGACTGGAGACCCTCATCTCATTAAACAAGT...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGATGAAGCCACTCCGGTaGAGAGCCTGGGACTTGTTT +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWMKPLR*RAWDLF
Trigger: AAACAAGTCCCAGGCTCTTCACCGGAGTGGCTTCAT...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGATCATTGCTAGAGGCTaGCCATCTAAACAAATAGCC +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWIIARG*PSKQIA
Trigger: GGCTATTTGTTTAGATGGTCAGCCTCTAGCAATGAT...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATGTTCTGAAGGCCTGGTaGGTCCCCCTCACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FHTVLFAICWNHGEQSADVLKAW*VPLTAR
Trigger: TCTGGCCGTGAGGGGGACTCACCAGGCCTTCAGAAC...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTCTCCTCCTCACCCTCTaGAGTGCCTGGACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASLLLTL*SAWTQS
Trigger: GCTTTGAGTCCAGGCACTGCAGAGGGTGAGGAGGAG...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGCCCTCACAGTTCCTGTaGTTTCGGCATAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWPSQFL*FRHRPV
Trigger: TACTGGCCTATGCCGAAAGCACAGGAACTGTGAGGG...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGAGTTCCGATTTGATATaGACCACCACATTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRSSDLI*TTTFLP
Trigger: GGGCAAAAATGTGGTGGTGCATATCAAATCGGAACT...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAAATGCAGAGGGGGACTaGTTTTCAAAGCACCGGTTA +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTANAEGD*FSKHRL
Trigger: TAACCGGTGCTTTGAAAAGCAGTCCCCCTCTGCATT...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGTCAGGCCAGGCTTCGTaGTCATGTCGAGTCACATGC +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLSGQAS*SCRVTC
Trigger: GCATGTGACTCGACATGAGCACGAAGCCTGGCCTGA...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGGACACTGTAACGTTGTaGCAGAGAAATAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWDTVTL*QRNSNA
Trigger: AGCATTGCTATTTCTCTGGCACAACGTTACAGTGTC...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACACTTTGGTGGTGGTTGTaGTGTTGGAAAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATLWWWL*CWKGLS
Trigger: TGAAAGTCCTTTCCAACACCACAACCACCACCAAAG...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCTTGTCCCTGAAACATaGGGCCAATCGGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHLVPET*GQSGID
Trigger: ATCTATGCCCGATTGGCCCCATGTTTCAGGGACAAG...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGGTTTCCCTTTTATACTaGTCATCTGCAGTAAACCGC +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRVSLLY*SSAVNR
Trigger: GCGGTTTACTGCAGATGACCAGTATAAAAGGGAAAC...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCACTTCTGTAACCAGATaGTGTACAGAGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSTSVTR*CTESLG
Trigger: CCCCAAGCTCTCTGTACACCATCTGGTTACAGAAGT...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGTTGTCCACACTGGCGTaGACTGCTGCAACAACACCT +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWLSTLA*TAATTP
Trigger: AGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAA...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGCAGGCAGCATCTGCTTaGTGTTATACAAAGAGCGAC +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRQAASA*CYTKSD
Trigger: GTCGCTCTTTGTATAACACCAAGCAGATGCTGCCTG...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGTGGTCAACAATACGTaGATAGAAGGGAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAVVNNT*IEGSGD
Trigger: GTCTCCACTCCCTTCTATCCACGTATTGTTGACCAC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGGTTCTTGGTCACAATTaGAATCATTCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWVLGHN*NHSPLQ
Trigger: CTGCAGAGGTGAATGATTCCAATTGTGACCAAGAAC...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433283.5
CDS-3UTR TCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATAGAGTTCACTTCCCATaGGATCAAACACCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHRVHFP*DQTPSQ
Trigger: CTGTGAGGGTGTTTGATCTCATGGGAAGTGAACTCT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGAGCAGTGACTTGAGGTaGTGGTTCAAACCATTCACA +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRSSDLR*WFKPFT
Trigger: TGTGAATGGTTTGAACCATCACCTCAAGTCACTGCT...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACTCCTCTGCTCTGGTCTaGTACCAGTCCATAACCTTC +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNSSALV*YQSITF
Trigger: GAAGGTTATGGACTGGTATCAGACCAGAGCAGAGGA...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGATGGCACTTGTCCCTaGAACATGGGGCCAATCGGG +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVADGTCP*NMGPIG
Trigger: CCCGATTGGCCCCATGTTTCAGGGACAAGTGCCATC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGAAGTTTCTCTTTTTCTaGTCGGGACAGATCATAGAG +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWKFLFF*SGQIIE
Trigger: CTCTATGATCTGTCCCGATCAGAAAAAGAGAAACTT...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp AAACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCACTTCAGTGTCTTCGGTACTaGAGTAACCCCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: KQLWIISRFIASTAIFPLQCLRY*SNPVST
Trigger: GGTGGAGACGGGGTTACTGCAGTACCGAAGACACTG...AAGTGGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR GCA 90 bp AGAGAGCCTCCAATCAGGATTAAGGTCATCATAGCCTGGAGTCTGGTGAAATTGATGGAATCGCCCAGATaGTCAGTTTCCCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: REPPIRIKVIIAWSLVKLMESPR*SVSLRS
Trigger: ACTTCTCAGGGAAACTGAGCATCTGGGCGATTCCAT...CAATTTCACCAGACTCCAGGCTATGATGACCTTAATCCTGATTGGAGGCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR GCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCGAGCCTCCAGGTCTGTaGCTTTTAATCCATACTGAA +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFEPPGL*LLIHTE
Trigger: TTCAGTATGGATTAAAAGGCACAGACCTGGAGGCTC...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAACAATGCATACTGGCTaGTTTGTAGTCATGGAAGCG +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTATMHTG*FVVMEA
Trigger: CGCTTCCATGACTACAAAGCAGCCAGTATGCATTGT...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAATAGGTCAGCTGAATTaGTACCTGGAACACCTACTT +
Preference number: 4 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATIGQLN*YLEHLL
Trigger: AAGTAGGTGTTCCAGGTAGCAATTCAGCTGACCTAT...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTCAGGCCAGGCTTCGTaGTCATGTCGAGTCACATGC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASSGQAS*SCRVTC
Trigger: GCATGTGACTCGACATGAGCACGAAGCCTGGCCTGA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCTGGAGAAAATGTAACTaGATCTACCACAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRAWRKCN*IYHSDE
Trigger: CTCATCACTGTGGTAGATGCAGTTACATTTTCTCCA...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACACACCAAGGTCAGCACTaGCACCACTCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTHQGQH*HHSMQK
Trigger: TTTCTGCATTGAGTGGTGGCAGTGCTGACCTTGGTG...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGCACCAAGGTCAGCACTaGCACCACTCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWHQGQH*HHSMQK
Trigger: TTTCTGCATTGAGTGGTGGCAGTGCTGACCTTGGTG...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTCTGCAGGCAGCATCTaGTTGGTGTTATACAAAGAG +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFSAGSI*LVLYKE
Trigger: CTCTTTGTATAACACCAAGCAGATGCTGCCTGCAGA...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCTGCAGGCAGCATCTaGTTGGTGTTATACAAAGAG +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTASAGSI*LVLYKE
Trigger: CTCTTTGTATAACACCAAGCAGATGCTGCCTGCAGA...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCTCTGCAGGCAGCATCTaGTTGGTGTTATACAAAGAG +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSSAGSI*LVLYKE
Trigger: CTCTTTGTATAACACCAAGCAGATGCTGCCTGCAGA...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTGCCATCTCGTGCAGATaGTCATCTCGGCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLAISCR*SSRLSR
Trigger: CCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGC...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTCCAGTGCCATCTCGTaGAGATGCTCATCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASSSAIS*RCSSRL
Trigger: GAGCCGAGATGAGCATCTGCACGAGATGGCACTGGA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGCGTGATTTGCTCCAGTaGCATCTCGTGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLRDLLQ*HLVQML
Trigger: GAGCATCTGCACGAGATGGCACTGGAGCAAATCACG...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATCACCCAGTGCTGTGCTaGGCGGAGGGCTGTACTGAA +
Preference number: 4 (lower is better)
Translates to: FHTVLFAICWNHGEQSADHPVLC*AEGCTE
Trigger: TTCAGTACAGCCCTCCGCGCAGCACAGCACTGGGTG...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACCACCCAGTGCTGTGCTaGGCGGAGGGCTGTACTGAA +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHHPVLC*AEGCTE
Trigger: TTCAGTACAGCCCTCCGCGCAGCACAGCACTGGGTG...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCTGATAAAGTTCCTCTaGTGTCGTGGAGCGCAAACT +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHLIKFL*CRGAQT
Trigger: AGTTTGCGCTCCACGACACCAGAGGAACTTTATCAG...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTTTCCAAACACTCATaGAGAACCCAGGATCGCTTC +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSILSKHS*RTQDRF
Trigger: GAAGCGATCCTGGGTTCTCCATGAGTGTTTGGAAAG...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATGGAGAAGTGGTCTCTaGAAAGTTGGACAGAATTGC +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAWRSGL*KVGQNC
Trigger: GCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCA...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGCTAGCTCCTCTTGAATaGCAGGGGGTCTGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWLAPLE*QGVCLL
Trigger: TAACAGACAGACCCCCTGCCATTCAAGAGGAGCTAG...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGAGACATCCAACGGCTTaGATAAGATCTAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRRHPTA*IRSSSS
Trigger: AGAGGAGCTAGATCTTATCCAAGCCGTTGGATGTCT...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTCTGATTGTCCTAACTaGCTACAAACATCCCAACTT +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRSDCPN*LQTSQL
Trigger: AAGTTGGGATGTTTGTAGCCAGTTAGGACAATCAGA...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTCCTGCAGCACCGCTTTaGTGGTGGTTGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAPAAPL*WWLWCW
Trigger: CCAACACCACAACCACCACCAAAGCGGTGCTGCAGG...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGTGCAAAGCTTTCCACTaGAACATGCTGATAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRCKAFH*NMLIGV
Trigger: GACACCTATCAGCATGTTCCAGTGGAAAGCTTTGCA...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTTCCAGGACCTTCAGTaGGTCCCTTGGCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAFQDLQ*VPWPTK
Trigger: CTTGGTGGGCCAAGGGACCCACTGAAGGTCCTGGAA...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCTTATTTGCAATTTGTTaGAACCATGGAGAACAATCG +
Preference number: 4 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPLFAIC*NHGEQS
Trigger: CGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGGGCGACTGTAAAACTTaGCACTTAACATCCTTAATA +
Preference number: 4 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRGDCKT*HLTSLI
Trigger: TATTAAGGATGTTAAGTGTCAAGTTTTACAGTCGCC...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACATTCCTCCACTGCCTCTaGTATACAAGGTCAGTATCC +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTFLHCL*YTRSVS
Trigger: GGATACTGACCTTGTATATCAGAGGCAGTGGAGGAA...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGTTCATGCCAAGGAATaGTCATCAGGGAGTCACCGT +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLVHAKE*SSGSHR
Trigger: ACGGTGACTCCCTGATGATCATTCCTTGGCATGAAC...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGTCCTCTGCTCTGGTCTaGTACCAGTCCATAACCTTC +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLSSALV*YQSITF
Trigger: GAAGGTTATGGACTGGTATCAGACCAGAGCAGAGGA...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATTCCAATGAGACTCACTaGCAGGAGGCTGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: FHTVLFAICWNHGEQSADSNETH*QEAASG
Trigger: GCCGGAAGCAGCCTCCTGTCAGTGAGTCTCATTGGA...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAAGCTGGAGGATTTTCTaGACAAGCACTGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTSWRIF*TSTAVH
Trigger: ATGCACTGCAGTGCTTGTTCAGAAAATCCTCCAGCT...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCTGGAGGATTTTCTaGACAAGCACTGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNSWRIF*TSTAVH
Trigger: ATGCACTGCAGTGCTTGTTCAGAAAATCCTCCAGCT...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGAAAGCCATGAGCTCTTaGCGAGTGGCCAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMKAMSS*RVAKSW
Trigger: CCAGGACTTGGCCACTCGTCAAGAGCTCATGGCTTT...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGCTGTAGTTCCGATTTaGTATGCACCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAAVVPI*YAPPHF
Trigger: AAAATGTGGTGGTGCATATCAAATCGGAACTACAGC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGACAAACCACTGTCCGTaGAGAGGAACTCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLTNHCP*RGTPNG
Trigger: CCCATTTGGAGTTCCTCTTCACGGACAGTGGTTTGT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAATTGACCATGTGCTGGTaGAAGGCTTCTGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWELTMCW*KASGSV
Trigger: GACTGATCCAGAAGCCTTTCACCAGCACATGGTCAA...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCGAATCCTTAGCTTCTTaGGCTTCGTCTTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSESLAS*ASSSEF
Trigger: AAACTCAGAAGACGAAGCTCAAGAAGCTAAGGATTC...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATCAGCAGGTCCTCAGGTaGAACCAGCTCCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHQQVLR*NQLLTL
Trigger: AAGGGTGAGGAGCTGGTTTCACCTGAGGACCTGCTG...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGCTCAGTCAGGTGAAATaGTTGCCCCAAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWLSQVK*LPQNLQ
Trigger: CTGCAGATTTTGGGGCAATCATTTCACCTGACTGAG...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAAAATTCAGCCTCGTGGTaGCTAGATTCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWENSASW*LDSRSS
Trigger: GGAACTCCTGGAATCTAGTCACCACGAGGCTGAATT...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp AAACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCACTTCCCCATTCCCCTTGTTaGTTCAGAGATGGAATCGCC +
Preference number: 4 (lower is better)
Translates to: KQLWIISRFIASTAIFPLPHSPC*FRDGIA
Trigger: GGCGATTCCATCTCTGAAGCAACAAGGGGAATGGGG...AAGTGGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR GCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCCGGTGTTTATGTTCATaGCAAGGAATGATCATCAGG +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSRCLCS*QGMIIR
Trigger: CCTGATGATCATTCCTTGGCATGAACATAAACACCG...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTTTTCTGAACAAGCACTaGAGTGCATCATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSIFLNKH*SASSVQ
Trigger: CTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAA...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTACAATGCATACTGGCTaGTTTGTAGTCATGGAAGCG +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSITMHTG*FVVMEA
Trigger: CGCTTCCATGACTACAAAGCAGCCAGTATGCATTGT...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAAGTTCCGATTTGATATaGACCACCACATTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTASSDLI*TTTFLP
Trigger: GGGCAAAAATGTGGTGGTGCATATCAAATCGGAACT...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTTTTATACTGGTCATCTaGAGTAAACCGCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSIFILVI*SKPLHV
Trigger: GACGTGCAGCGGTTTACTGCAGATGACCAGTATAAA...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACCACACTGGCGTGGACTaGTGCAACAACACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYHTGVD*CNNTFQ
Trigger: CTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTG...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATGCCATCTCGTGCAGATaGTCATCTCGGCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: FHTVLFAICWNHGEQSADAISCR*SSRLSR
Trigger: CCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGC...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGGTGACTGCCGTGATTTaGTCCAGTGCCATCTCGTGC +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMVTAVI*SSAISC
Trigger: GCACGAGATGGCACTGGAGCAAATCACGGCAGTCAC...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGTTGTTGCTTCAGAGATaGAATCGCCCAGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWLLLQR*NRPDAQ
Trigger: CTGAGCATCTGGGCGATTCCATCTCTGAAGCAACAA...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACATTCTCCACCGTAAGCTaGGTCATCCTGAACCTTAGT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTFSTVS*VILNLS
Trigger: ACTAAGGTTCAGGATGACCCAGCTTACGGTGGAGAA...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATAGACATCCAACGGCTTaGATAAGATCTAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHRHPTA*IRSSSS
Trigger: AGAGGAGCTAGATCTTATCCAAGCCGTTGGATGTCT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCCTGCAGCACCGCTTTaGTGGTGGTTGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLPAAPL*WWLWCW
Trigger: CCAACACCACAACCACCACCAAAGCGGTGCTGCAGG...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTGGTGAAAGGCTTCTaGATCAGTCTTCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSILVKGF*ISLQSL
Trigger: GAGACTTTGAAGACTGATCCAGAAGCCTTTCACCAG...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGTTCAGCAGTCGAATGTaGGTTTCTGGTTTAATGGCA +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRFSSRM*VSGLMA
Trigger: TGCCATTAAACCAGAAACCCACATTCGACTGCTGAA...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAAATTTGTTGGAACCATaGAGAACAATCGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATNLLEP*RTIGRY
Trigger: GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CGTGCAGATGCTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATGGAAGCAGGATTATTTGCAATTTGTTaGAACCATGGAGAACAATCG +
Preference number: 4 (lower is better)
Translates to: RADAHLGSRGEVSEMEAGLFAIC*NHGEQS
Trigger: CGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA...TCCTGCTTCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR TCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCCCTTTTAATCCATACTaGAGCAGTTCTTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFPFNPY*SSSFAA
Trigger: TGCTGCAAAAGAACTGCTTCAGTATGGATTAAAAGG...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACACTTGCGTGCCTCTTCTaGGCTAGATTGAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTLACLF*ARLSVF
Trigger: AAAAACACTCAATCTAGCTCAGAAGAGGCACGCAAG...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTGGCCATCAGCTCCTaGCAATGCATACTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHVAISS*QCILAA
Trigger: AGCAGCCAGTATGCATTGTCAGGAGCTGATGGCCAC...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCTTAATGGTGAAGCACTaGTATTTTCCCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSLMVKH*YFPLLH
Trigger: ATGAAGGAGGGGAAAATATCAGTGCTTCACCATTAA...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGCAAGATATTTTGACTTaGAAGAACTGGCTCCAATGC +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRQDILT*KNWLQC
Trigger: GCATTGGAGCCAGTTCTTTCAAGTCAAAATATCTTG...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTTTGAGCTTCGTCTTCTaGGTTTCTTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: WNHGEQSADTHVASGNSILSFVF*VSFPWL
Trigger: AAGCCAAGGAAAAGAAACTCAGAAGACGAAGCTCAA...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAATCTTCAGAGAAAGGATaGAGCTGTGGCTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWESSEKG*SCGSGF
Trigger: AAACCCTGAGCCACAGCTTCATCCTTTCTCTGAAGA...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTCACTATATCCTTGGGTaGGATGTCAAGAGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASHYILG*DVKRAN
Trigger: GTTGGCCCTCTTGACATCTCACCCAAGGATATAGTG...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCAAGCTTTCCATTGCTTaGAAGTACCAAATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFKLSIA*KYQMPV
Trigger: AACTGGCATTTGGTACTTGCAAGCAATGGAAAGCTT...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAAATGGAATCGCCCAGATaGTCAGTTTCCCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEMESPR*SVSLRS
Trigger: ACTTCTCAGGGAAACTGAGCATCTGGGCGATTCCAT...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGCCCCATTCCCCTTGTTaGTTCAGAGATGGAATCGCC +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMPHSPC*FRDGIA
Trigger: GGCGATTCCATCTCTGAAGCAACAAGGGGAATGGGG...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGCTTCCGGCCAGTGTaGCTCGTCAATCTAACCATC +
Preference number: 4 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCCFRPV*LVNLTI
Trigger: GATGGTTAGATTGACGAGGCACACTGGCCGGAAGCA...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACACAGAGAGCTGCTAGCTaGCAAAAGAAGTTCAATGCT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTQRAAS*QKKFNA
Trigger: AGCATTGAACTTCTTTTGGCAGCTAGCAGCTCTCTG...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGCTTCACTTGCTAGTTaGAAGAGAACTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAASLAS*KRTSVV
Trigger: AACAACTGAAGTTCTCTTGCAACTAGCAAGTGAAGC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATAAGAACTGGCTCCAATaGTTCAAGAGGACTCATGTT +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHKNWLQ*FKRTHV
Trigger: AACATGAGTCCTCTTGAAGCATTGGAGCCAGTTCTT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGACTGCCACCACTCAATaGAGAAATTATTTTCATGAT +
Preference number: 4 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWTATTQ*RNYFHD
Trigger: ATCATGAAAATAATTTCTGCATTGAGTGGTGGCAGT...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGAGAACACGAGGAGCTTaGTGTCCTCCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMRTRGA*CPPQSG
Trigger: ACCTGACTGAGGAGGACAGCAAGCTCCTCGTGTTCT...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATTCCAGTGCCATCTCGTaGAGATGCTCATCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHSSAIS*RCSSRL
Trigger: GAGCCGAGATGAGCATCTGCACGAGATGGCACTGGA...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTGACTGCCGTGATTTaGTCCAGTGCCATCTCGTGC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHVTAVI*SSAISC
Trigger: GCACGAGATGGCACTGGAGCAAATCACGGCAGTCAC...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp ACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCACTTACTTGTTGCTTCAGAGATaGAATCGCCCAGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: TAVDYIKIHRINCHLPTYLLLQR*NRPDAQ
Trigger: CTGAGCATCTGGGCGATTCCATCTCTGAAGCAACAA...GTAAGTGGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGTCGTGGGCGTTTCCGTaGTGGTGCAAATCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLSWAFP*WCKSLH
Trigger: ATGGAGCGATTTGCACCACCACGGAAACGCCCACGA...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTTTAGTAATGGTTCGTaGGCGTTTCCGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASFSNGS*AFPWWC
Trigger: GCACCACCACGGAAACGCCCACGAACCATTACTAAA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACATCCCCGCCTTTCTTCTaGGTTCTCACCTGCAACCCT +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTSPPFF*VLTCNP
Trigger: AGGGTTGCAGGTGAGAACCCAGAAGAAAGGCGGGGA...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACGCAGCACCGCTTTGGTaGTGGTTGTGGTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYAAPLW*WLWCWK
Trigger: TTTCCAACACCACAACCACCACCAAAGCGGTGCTGC...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACTGCAAAGCTTTCCACTaGAACATGCTGATAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNCKAFH*NMLIGV
Trigger: GACACCTATCAGCATGTTCCAGTGGAAAGCTTTGCA...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACACTTCCACAGACAGCTTaGTCACAGCTTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTLPQTA*SQLLEK
Trigger: TTTCTCCAAAAGCTGTGACCAAGCTGTCTGTGGAAG...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGAAAGGATGAAGCTGTaGCTCAGGGTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAERMKL*LRVSRW
Trigger: CCACCTGGAAACCCTGAGCCACAGCTTCATCCTTTC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAAGTGGTCAACAATACGTaGATAGAAGGGAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEVVNNT*IEGSGD
Trigger: GTCTCCACTCCCTTCTATCCACGTATTGTTGACCAC...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAATTTGTTGGAACCATaGAGAACAATCGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: CWNHGEQSADTHVASGNSNLLEP*RTIGRY
Trigger: GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATAGTTTCCCTGAGAAGTaGATGGCTGCCAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHSFPEK*MAARSI
Trigger: GATGCTCCTGGCAGCCATTCACTTCTCAGGGAAACT...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGAATTGAAGCAACGTTaGCCGCTGACTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAELKQR*PLTSST
Trigger: AGTGGAGGAAGTCAGCGGTCAACGTTGCTTCAATTC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACCTCTGTTCAGATGCATaGGGCACTCCTAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYLCSDA*GTPRIS
Trigger: GGAAATCCTAGGAGTGCCTCATGCATCTGAACAGAG...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGAGAATTGCAAGGCGATaGGGAAGCAGGTCGGAACCA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLRIARR*GSRSEP
Trigger: TGGTTCCGACCTGCTTCCTCATCGCCTTGCAATTCT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTTTTTCCAAAAGCTCTaGCACACTGAGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFFFQKL*HTENLF
Trigger: GAACAAATTCTCAGTGTGTCAGAGCTTTTGGAAAAA...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGAGCAACGTTCTCCAATaGGACTCACTGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLSNVLQ*DSLTGG
Trigger: GCCTCCTGTCAGTGAGTCTCATTGGAGAACGTTGCT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGTTTTCCCCTCCTTCATaGTGGATCTGGAAATTCACT +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWFSPPS*WIWKFT
Trigger: AGTGAATTTCCAGATCCATCATGAAGGAGGGGAAAA...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGTTGAGCTTCGTCTTCTaGGTTTCTTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWLSFVF*VSFPWL
Trigger: AAGCCAAGGAAAAGAAACTCAGAAGACGAAGCTCAA...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAATCATTGCTAGAGGCTaGCCATCTAAACAAATAGCC +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTIIARG*PSKQIA
Trigger: GGCTATTTGTTTAGATGGTCAGCCTCTAGCAATGAT...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAACAATCGTAACTCCATaGTACCCGTCTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTTIVTP*YPSPLG
Trigger: CCCCAGTGGAGACGGGTAGCATGGAGTTACGATTGT...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGAGTCACTGCACTGTCTaGCCACCAATTGACATCTAT +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLSHCTV*PPIDIY
Trigger: ATAGATGTCAATTGGTGGGCAGACAGTGCAGTGACT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATTGCTTCCGGCCAGTGTaGCTCGTCAATCTAACCATC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHCFRPV*LVNLTI
Trigger: GATGGTTAGATTGACGAGGCACACTGGCCGGAAGCA...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACGAACAAGCACTGCAGTaGATCATCTGTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHEQALQ*IICPAR
Trigger: CCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTC...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAAAGAACTGGCTCCAATaGTTCAAGAGGACTCATGTT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTKNWLQ*FKRTHV
Trigger: AACATGAGTCCTCTTGAAGCATTGGAGCCAGTTCTT...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGTTCATGATTGCACTCTaGACTATATCCTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWFMIAL*TISLGE
Trigger: CTCACCCAAGGATATAGTGCAGAGTGCAATCATGAA...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACCGTGATTTGCTCCAGTaGCATCTCGTGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHRDLLQ*HLVQML
Trigger: GAGCATCTGCACGAGATGGCACTGGAGCAAATCACG...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTGGAATCATTCACCTCTaGAGGCAGCATCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLGIIHL*RQHLLG
Trigger: ACCAAGCAGATGCTGCCTGCAGAGGTGAATGATTCC...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433283.5
CDS-3UTR CCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCAAAGTAGCGAGCCTTaGCAGATATTTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHQSSEP*QIFHNQ
Trigger: CTGATTATGAAATATCTGCCAAGGCTCGCTACTTTG...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACTGTCATGAAGCTTTGTaGTTGCCTCTGTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNCHEAL*LPLSYH
Trigger: GTGATAAGACAGAGGCAACCACAAAGCTTCATGACA...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGCCTGACAATGCATACTaGCTGCTTTGTAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLPDNAY*LLCSHG
Trigger: TCCATGACTACAAAGCAGCCAGTATGCATTGTCAGG...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGGCACCGCTTTGGTGGTaGTTGTGGTGTTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLAPLWW*LWCWKG
Trigger: TCCTTTCCAACACCACAACCACCACCAAAGCGGTGC...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAGCACCGCTTTGGTGGTaGTTGTGGTGTTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTAPLWW*LWCWKG
Trigger: TCCTTTCCAACACCACAACCACCACCAAAGCGGTGC...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGGCAGCACCGCTTTGGTaGTGGTTGTGGTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLAAPLW*WLWCWK
Trigger: TTTCCAACACCACAACCACCACCAAAGCGGTGCTGC...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACGGTGTACAGAGAGCTTaGGGAAAGCATCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYGVQRA*GKHLSI
Trigger: GATGGACAGATGCTTTCCCCAAGCTCTCTGTACACC...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACCTCAGGGTTTCCAGGTaGGCAAGTGATTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYLRVSR*ASDFSR
Trigger: TCTGGAGAAATCACTTGCCCACCTGGAAACCCTGAG...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATTTGTCCACACTGGCGTaGACTGCTGCAACAACACCT +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHLSTLA*TAATTP
Trigger: AGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAA...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACATTGTCCACACTGGCGTaGACTGCTGCAACAACACCT +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTLSTLA*TAATTP
Trigger: AGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAA...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGATGTCTACCTGTCTCTaGGGCCAGGAGGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLMSTCL*GQEALR
Trigger: TCTCAAAGCCTCCTGGCCCCAGAGACAGGTAGACAT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTCTACCTGTCTCTaGGGCCAGGAGGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHMSTCL*GQEALR
Trigger: TCTCAAAGCCTCCTGGCCCCAGAGACAGGTAGACAT...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGGTGGATAGAAGGGAGTaGAGACACACTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMVDRRE*RHTSPA
Trigger: TGCTGGTGAAGTGTGTCTCCACTCCCTTCTATCCAC...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTACAGCTAGAAGCTTTTaGCATGCCTACTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASTARSF*HAYFSS
Trigger: ACTGCTGAAGTAGGCATGTCAAAAGCTTCTAGCTGT...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATCCCAAGTCGAATAAGTaGCAATGCACAGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: FHTVLFAICWNHGEQSADPKSNK*QCTVHL
Trigger: CAGGTGGACTGTGCATTGTCACTTATTCGACTTGGG...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACTCAAAGCAAAAGCCATaGGCTCTTGACGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHSKQKP*ALDEWP
Trigger: TGGCCACTCGTCAAGAGCTCATGGCTTTTGCTTTGA...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGACAAACCACTGTCCGTaGAGAGGAACTCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLTNHCP*RGTPNG
Trigger: CCCATTTGGAGTTCCTCTTCACGGACAGTGGTTTGT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACCAAGATATTTTGACTTaGAAGAACTGGCTCCAATGC +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNQDILT*KNWLQC
Trigger: GCATTGGAGCCAGTTCTTTCAAGTCAAAATATCTTG...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTCCTCCTCAGTCAGGTaGAATGATTGCCCCAAAATC +
Preference number: 4 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCSSSVR*NDCPKI
Trigger: GATTTTGGGGCAATCATTTCACCTGACTGAGGAGGA...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGAATTCAGCCTCGTGGTaGCTAGATTCCAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLNSASW*LDSRSS
Trigger: GGAACTCCTGGAATCTAGTCACCACGAGGCTGAATT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR GCA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTTTATTTTTAGCCTCTaGCAATTTTCCAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFFIFSL*QFSSSQ
Trigger: CTGAGAACTGGAAAATTGGCAGAGGCTAAAAATAAA...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAATGCAGAGGGGGACTaGTTTTCAAAGCACCGGTTA +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYNAEGD*FSKHRL
Trigger: TAACCGGTGCTTTGAAAAGCAGTCCCCCTCTGCATT...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTTTATACTGGTCATCTaGAGTAAACCGCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASFILVI*SKPLHV
Trigger: GACGTGCAGCGGTTTACTGCAGATGACCAGTATAAA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACATGGAGAAAATGTAACTaGATCTACCACAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTWRKCN*IYHSDE
Trigger: CTCATCACTGTGGTAGATGCAGTTACATTTTCTCCA...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGACTGCCACCACTCAATaGAGAAATTATTTTCATGAT +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRTATTQ*RNYFHD
Trigger: ATCATGAAAATAATTTCTGCATTGAGTGGTGGCAGT...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp ACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCACTTACATTCATCGCATCAACTaGCATCTTCCCACTTACTCT +
Preference number: 4 (lower is better)
Translates to: TAVDYIKIHRINCHLPTYIHRIN*HLPTYS
Trigger: AGAGTAAGTGGGAAGATGGCAGTTGATGCGATGAAT...GTAAGTGGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR CCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTGGTCTCTGGAAAGTTaGACAGAATTGCAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASWSLES*TELQGD
Trigger: ATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTATCTGTCCAGCCAGGTaGATGTTTTCAAGGCGACTA +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLICPAR*MFSRRL
Trigger: TAGTCGCCTTGAAAACATCCACCTGGCTGGACAGAT...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTGTTGTAAGCAGCACCTaGCTAGATCCATGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLVVSST*LDPCSY
Trigger: ATAGCTGCATGGATCTAGCCAGGTGCTGCTTACAAC...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTGGCCCAGAAGCTTGGTaGATTGTTTATAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLGPEAW*IVYSMW
Trigger: CCACATGCTATAAACAATCCACCAAGCTTCTGGGCC...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGGCCCAGAAGCTTGGTaGATTGTTTATAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAGPEAW*IVYSMW
Trigger: CCACATGCTATAAACAATCCACCAAGCTTCTGGGCC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACCTTGTCCCTGAAACATaGGGCCAATCGGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHLVPET*GQSGID
Trigger: ATCTATGCCCGATTGGCCCCATGTTTCAGGGACAAG...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAAGTTTCCCTTTTATACTaGTCATCTGCAGTAAACCGC +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEVSLLY*SSAVNR
Trigger: GCGGTTTACTGCAGATGACCAGTATAAAAGGGAAAC...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAAGAGGAACTCCAAATaGGTCATAAAAACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ICWNHGEQSADTHVASGNKRNSK*VIKTSQ
Trigger: CTGGGAAGTTTTTATGACCCATTTGGAGTTCCTCTT...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTCTGGTGAAAGGCTTCTaGATCAGTCTTCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASLVKGF*ISLQSL
Trigger: GAGACTTTGAAGACTGATCCAGAAGCCTTTCACCAG...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTCGAATGTGGGTTTCTaGTTTAATGGCACAGTTCCC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASSNVGF*FNGTVP
Trigger: GGGAACTGTGCCATTAAACCAGAAACCCACATTCGA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGATGAGGTCACCTGGGTaGAGACGATCAAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMMRSPG*RRSKYF
Trigger: GAAGTACTTTGATCGTCTCCACCCAGGTGACCTCAT...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTAGTGATGAGGTCACCTaGGTGGAGACGATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVASDEVT*VETIKV
Trigger: TACTTTGATCGTCTCCACCCAGGTGACCTCATCACT...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTCAGGGTTTCCAGGTaGGCAAGTGATTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLLRVSR*ASDFSR
Trigger: TCTGGAGAAATCACTTGCCCACCTGGAAACCCTGAG...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTCAGGCAGCATCTGCTTaGTGTTATACAAAGAGCGAC +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAQAASA*CYTKSD
Trigger: GTCGCTCTTTGTATAACACCAAGCAGATGCTGCCTG...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGAGAAGTTTCAGAGATaGAAGCAGGAGGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAEKFQR*KQEGLV
Trigger: AACCAGTCCCTCCTGCTTCCATCTCTGAAACTTCTC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACGAGAAGTTTCAGAGATaGAAGCAGGAGGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYEKFQR*KQEGLV
Trigger: AACCAGTCCCTCCTGCTTCCATCTCTGAAACTTCTC...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACGTGGTCAACAATACGTaGATAGAAGGGAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYVVNNT*IEGSGD
Trigger: GTCTCCACTCCCTTCTATCCACGTATTGTTGACCAC...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGTGGTCAACAATACGTaGATAGAAGGGAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAVVNNT*IEGSGD
Trigger: GTCTCCACTCCCTTCTATCCACGTATTGTTGACCAC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGAATTTGTTGGAACCATaGAGAACAATCGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWNLLEP*RTIGRY
Trigger: GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGTTATTTGCAATTTGTTaGAACCATGGAGAACAATCG +
Preference number: 4 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRLFAIC*NHGEQS
Trigger: CGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGTCTTTCGGAACTTaGCATTTCCCAATAATGGAT +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASGSFGT*HFPIMD
Trigger: ATCCATTATTGGGAAATGTCAAGTTCCGAAAGACCC...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACTGGGTAGCAGTGACTTaGGGTGATGGTTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHWVAVT*GDGSNH
Trigger: ATGGTTTGAACCATCACCTCAAGTCACTGCTACCCA...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGTTTCTCACAACGATaGAGAAAGGGAACCATCCAC +
Preference number: 4 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCCFSQR*RKGTIH
Trigger: GTGGATGGTTCCCTTTCTTCATCGTTGTGAGAAACA...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGTTAATGGTGAAGCACTaGTATTTTCCCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLLMVKH*YFPLLH
Trigger: ATGAAGGAGGGGAAAATATCAGTGCTTCACCATTAA...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTACTTGTTTAATGAGATaGGGGTCTCCAGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLTCLMR*GSPVQN
Trigger: GTTCTGGACTGGAGACCCTCATCTCATTAAACAAGT...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACTCTTCAGAGAAAGGATaGAGCTGTGGCTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHSSEKG*SCGSGF
Trigger: AAACCCTGAGCCACAGCTTCATCCTTTCTCTGAAGA...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGAAGTTTCTCTTTTTCTaGTCGGGACAGATCATAGAG +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLKFLFF*SGQIIE
Trigger: CTCTATGATCTGTCCCGATCAGAAAAAGAGAAACTT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATTCCTCCTCAGTCAGGTaGAATGATTGCCCCAAAATC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHSSSVR*NDCPKI
Trigger: GATTTTGGGGCAATCATTTCACCTGACTGAGGAGGA...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAAAGTTGGACAGAATTaGAAGGCGATGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYKVGQN*KAMRKQ
Trigger: CTGCTTCCTCATCGCCTTGCAATTCTGTCCAACTTT...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTCAGAGAGCTGCTAGCTaGCAAAAGAAGTTCAATGCT +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAQRAAS*QKKFNA
Trigger: AGCATTGAACTTCTTTTGGCAGCTAGCAGCTCTCTG...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGCAGGCAGCATCTaGTTGGTGTTATACAAAGAG +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVASAGSI*LVLYKE
Trigger: CTCTTTGTATAACACCAAGCAGATGCTGCCTGCAGA...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAAATATCAACCCAGCAATaGCATAGCTTAAGTCACCTA +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEISTQQ*HSLSHL
Trigger: TAGGTGACTTAAGCTATGCCATTGCTGGGTTGATAT...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAAAGGTCATCATAGCCTaGCTGCTCATTTTGACCCCA +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTKVIIA*LLILTP
Trigger: TGGGGTCAAAATGAGCAGCCAGGCTATGATGACCTT...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGAGTTACATCACACCTaGCTTCATAAACCAATGTTT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTELHHT*LHKPMF
Trigger: AAACATTGGTTTATGAAGCCAGGTGTGATGTAACTC...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTGTCATGAAGCTTTGTaGTTGCCTCTGTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASCHEAL*LPLSYH
Trigger: GTGATAAGACAGAGGCAACCACAAAGCTTCATGACA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACGTTGTAAGCAGCACCTaGCTAGATCCATGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHVVSST*LDPCSY
Trigger: ATAGCTGCATGGATCTAGCCAGGTGCTGCTTACAAC...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCCAAGGCCCAGAAGCTTaGTGGATTGTTTATAGCATG +
Preference number: 4 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCQGPEA*WIVYSM
Trigger: CATGCTATAAACAATCCACCAAGCTTCTGGGCCTTG...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTTGGTGGTGGTTGTaGTGTTGGAAAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLLWWWL*CWKGLS
Trigger: TGAAAGTCCTTTCCAACACCACAACCACCACCAAAG...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGATGAGGTCACCTGGGTaGAGACGATCAAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLMRSPG*RRSKYF
Trigger: GAAGTACTTTGATCGTCTCCACCCAGGTGACCTCAT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ATCACTGTAGCTAGTCTCACCCATGGATTATTGGTTATGACATATTCACTTTTCGAGAAGTTTCAGAGATaGAAGCAGGAGGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: ITVASLTHGLLVMTYSLFEKFQR*KQEGLV
Trigger: AACCAGTCCCTCCTGCTTCCATCTCTGAAACTTCTC...GAAAAGTGAATATGTCATAACCAATAATCCATGGGTGAGACTAGCTACAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR CCA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTTATTTGCAATTTGTTaGAACCATGGAGAACAATCG +
Preference number: 4 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHLFAIC*NHGEQS
Trigger: CGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR TCA 90 bp GTGAAAACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCGGCGACTGTAAAACTTaGCACTTAACATCCTTAATA +
Preference number: 4 (lower is better)
Translates to: VKTAVDYIKIHRINCHLPGDCKT*HLTSLI
Trigger: TATTAAGGATGTTAAGTGTCAAGTTTTACAGTCGCC...GGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR TCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATCTCTTCATCAGGTGGTaGAAGCTCTTCATAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHLFIRW*KLFIGD
Trigger: ATCTCCTATGAAGAGCTTTCACCACCTGATGAAGAG...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACCTTGCGTGCCTCTTCTaGGCTAGATTGAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHLACLF*ARLSVF
Trigger: AAAAACACTCAATCTAGCTCAGAAGAGGCACGCAAG...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGAGTTTTCCAGAAGAGTaGAATAATACTGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLSFPEE*NNTAAF
Trigger: AAAGGCTGCAGTATTATTTCACTCTTCTGGAAAACT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACTTGAGCTTCGTCTTCTaGGTTTCTTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYLSFVF*VSFPWL
Trigger: AAGCCAAGGAAAAGAAACTCAGAAGACGAAGCTCAA...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGGAATCCTTAGCTTCTTaGGCTTCGTCTTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMESLAS*ASSSEF
Trigger: AAACTCAGAAGACGAAGCTCAAGAAGCTAAGGATTC...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACATTCCAGGTGGGCAAGTaGTTTCTCCAGATGATTCAA +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTFQVGK*FLQMIQ
Trigger: TTGAATCATCTGGAGAAATCACTTGCCCACCTGGAA...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATATGCTCTATTTCCTCTaGTCTGGTCTGATACCAGTC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHMLYFL*SGLIPV
Trigger: GACTGGTATCAGACCAGAGCAGAGGAAATAGAGCAT...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGTTCACAGGTATAGATaGACTCTAGTGCTATTGCCA +
Preference number: 4 (lower is better)
Translates to: LFAICWNHGEQSADTHVAVHRYR*TLVLLP
Trigger: TGGCAATAGCACTAGAGTGCATCTATACCTGTGAAC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATTTTCTGAACAAGCACTaGAGTGCATCATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHFLNKH*SASSVQ
Trigger: CTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAA...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACTCATGTCGAGTCACATaGCTGGTGACCATCTTGATT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHSCRVT*LVTILI
Trigger: AATCAAGATGGTCACCAGGCATGTGACTCGACATGA...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACTTCATGATTGCACTCTaGACTATATCCTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYFMIAL*TISLGE
Trigger: CTCACCCAAGGATATAGTGCAGAGTGCAATCATGAA...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTTTCATGATTGCACTCTaGACTATATCCTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLFMIAL*TISLGE
Trigger: CTCACCCAAGGATATAGTGCAGAGTGCAATCATGAA...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAACTGCCACCACTCAATaGAGAAATTATTTTCATGAT +
Preference number: 4 (lower is better)
Translates to: FVGTMENNRQIHMLLLGTTATTQ*RNYFHD
Trigger: ATCATGAAAATAATTTCTGCATTGAGTGGTGGCAGT...TGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACAAGGCCCAGAAGCTTaGTGGATTGTTTATAGCATG +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTQGPEA*WIVYSM
Trigger: CATGCTATAAACAATCCACCAAGCTTCTGGGCCTTG...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTAAGAGGAACTCCAAATaGGTCATAAAAACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FAICWNHGEQSADTHVASKRNSK*VIKTSQ
Trigger: CTGGGAAGTTTTTATGACCCATTTGGAGTTCCTCTT...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTCAGCAGTCGAATGTaGGTTTCTGGTTTAATGGCA +
Preference number: 4 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMFSSRM*VSGLMA
Trigger: TGCCATTAAACCAGAAACCCACATTCGACTGCTGAA...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACCATCTTTTGCAGACCTaGTTTCCACACACTGATCTT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHHLLQT*FPHTDL
Trigger: AAGATCAGTGTGTGGAAATCAGGTCTGCAAAAGATG...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR TCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGGAATCCTTAGCTTCTTaGGCTTCGTCTTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLESLAS*ASSSEF
Trigger: AAACTCAGAAGACGAAGCTCAAGAAGCTAAGGATTC...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAATCATTGCTAGAGGCTaGCCATCTAAACAAATAGCC +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTIIARG*PSKQIA
Trigger: GGCTATTTGTTTAGATGGTCAGCCTCTAGCAATGAT...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR TCA 90 bp AAACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCACTTAGTCTGGTGAAATTGTaGAAACAGCTGTGGATTATA +
Preference number: 4 (lower is better)
Translates to: KQLWIISRFIASTAIFPLSLVKL*KQLWII
Trigger: TATAATCCACAGCTGTTTTCACAATTTCACCAGACT...AAGTGGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR GCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATCGTGATGATAAAGGATaGACCATGTTTTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHRDDKG*TMFLVA
Trigger: GGCAACCAAAAACATGGTGCATCCTTTATCATCACG...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGGTTCACAGGTATAGATaGACTCTAGTGCTATTGCCA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLVHRYR*TLVLLP
Trigger: TGGCAATAGCACTAGAGTGCATCTATACCTGTGAAC...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGATAGGTCAGCTGAATTaGTACCTGGAACACCTACTT +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLIGQLN*YLEHLL
Trigger: AAGTAGGTGTTCCAGGTAGCAATTCAGCTGACCTAT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAATTTATTTTTAGCCTCTaGCAATTTTCCAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEFIFSL*QFSSSQ
Trigger: CTGAGAACTGGAAAATTGGCAGAGGCTAAAAATAAA...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR GCA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTGCTTCACTTGCTAGTTaGAAGAGAACTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLASLAS*KRTSVV
Trigger: AACAACTGAAGTTCTCTTGCAACTAGCAAGTGAAGC...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAATTCATGTGGAGAAGTaGTCTCTGGAAAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTIHVEK*SLESWT
Trigger: TGTCCAACTTTCCAGAGACCACTTCTCCACATGAAT...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGACCTATAAAACTAGATaGCGGGGAAATGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLTYKTR*RGNDKE
Trigger: CTCTTTGTCATTTCCCCGGCATCTAGTTTTATAGGT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACAAATTCACTTTCATCTTaGAGATTCGGCTCAACAACC +
Preference number: 4 (lower is better)
Translates to: HTVLFAICWNHGEQSADTNSLSS*RFGSTT
Trigger: GGTTGTTGAGCCGAATCTCCAAGATGAAAGTGAATT...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGATGTCTTTCATCTGCTaGAGTTCTTTCAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLMSFIC*SSFRVR
Trigger: TCTAACCCTGAAAGAACTCCAGCAGATGAAAGACAT...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGTCTGATTGTCCTAACTaGCTACAAACATCCCAACTT +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLSDCPN*LQTSQL
Trigger: AAGTTGGGATGTTTGTAGCCAGTTAGGACAATCAGA...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR TCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACAGTTTTCCAGAAGAGTaGAATAATACTGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHSFPEE*NNTAAF
Trigger: AAAGGCTGCAGTATTATTTCACTCTTCTGGAAAACT...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATAACAGAATATTCATGTaGAGAAGTGGTCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHNRIFM*RSGLWK
Trigger: TTTCCAGAGACCACTTCTCCACATGAATATTCTGTT...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR GCA 90 bp TTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGTGTAAAATCATCTTTTaGAGACCTGATTTCCACACA +
Preference number: 4 (lower is better)
Translates to: FYLQFVGTMENNRQIHMLCKIIF*RPDFHT
Trigger: TGTGTGGAAATCAGGTCTGCAAAAGATGATTTTACA...CAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATATTGACATCTATCAGTaGGTAAAAGGACTCTTTATC +
Preference number: 4 (lower is better)
Translates to: TVLFAICWNHGEQSADTHIDIYQ*VKGLFI
Trigger: GATAAAGAGTCCTTTTACCCACTGATAGATGTCAAT...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CCA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACTTTTTGCTGCAGATCTaGTTTGGAATGCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHFLLQI*FGMLKY
Trigger: ATATTTCAGCATTCCAAACCAGATCTGCAGCAAAAA...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS TCA 90 bp CGTCTCCTCCTCACCCTCTGCAGTGCCTGGACTCAAAGCCGGCCCTaGCTCGGGGGCCGCCATGTTCGCCGAGGACTCAGGCAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: RLLLTLCSAWTQSRP*LGGRHVRRGLRQRR
Trigger: CCTCCGCTGCCTGAGTCCTCGGCGAACATGGCGGCCCCCGAGTCAGGGCCGGCTTTGAGTCCAGGCACTGCAGAGGGTGAGGAGGAGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS TCA 90 bp GCAGCAGACACAGCTCCTTCACACCCTGAAACCACAGAGCAGGGGTaGGCGAGAACTCCACGACGTACTTCTCACCGGCACGGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: AADTAPSHPETTEQG*ARTPRRTSHRHGSG
Trigger: GCCAGAACCGTGCCGGTGAGAAGTACGTCGTGGAGTTCTCGCTCACCCCTGCTCTGTGGTTTCAGGGTGTGAAGGAGCTGTGTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS CCA 90 bp CACACTGGCGTGGACTGCTGCAACAACACCTTCCAGGACCTTCAGTaGGTCCCTTGGCCCACCAAGGTCAGCACTGCCACCACTCAATGC +
Preference number: 5 (lower is better)
Translates to: HTGVDCCNNTFQDLQ*VPWPTKVSTATTQC
Trigger: GCATTGAGTGGTGGCAGTGCTGACCTTGGTGGGCCAAGGGACCCACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS GCA 90 bp CAATGTCAGCTATGTCTACCCCTTGTCCACACTGGCGTGGACTGCTaGAACAACACCTTCCAGGACCTTCAGTGGGTCCCTTGGCCCACC +
Preference number: 5 (lower is better)
Translates to: QCQLCLPLVHTGVDC*NNTFQDLQWVPWPT
Trigger: GGTGGGCCAAGGGACCCACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGGTAGACATAGCTGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS TCA 90 bp AGGAGGGACTGGTTAAGCAGCAGCAGACACAGCTCCTTCACACCCTaGAACCACAGAGCAGGGGTGAGCGAGAACTCCACGACGTACTTC +
Preference number: 5 (lower is better)
Translates to: RRDWLSSSRHSSFTP*NHRAGVSENSTTYF
Trigger: GAAGTACGTCGTGGAGTTCTCGCTCACCCCTGCTCTGTGGTTTCAGGGTGTGAAGGAGCTGTGTCTGCTGCTGCTTAACCAGTCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS GCA 90 bp TCTCAATGTCAGCTATGTCTACCCCTTGTCCACACTGGCGTGGACTaGTGCAACAACACCTTCCAGGACCTTCAGTGGGTCCCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: SQCQLCLPLVHTGVD*CNNTFQDLQWVPWP
Trigger: GGGCCAAGGGACCCACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGGTAGACATAGCTGACATTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR CAA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCGCCTGCAGCACCGCTTaGGTGGTGGTTGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRAACSTA*VVVVVL
Trigger: CAACACCACAACCACCACCAAAGCGGTGCTGCAGGC...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 90 bp GGGGTCGAAGGTAAGTTAAAGACTTCTTCCACCACTGCCCATCACTaGCGGCCTGCAGCACCGCTTTGGTGGTGGTTGTGGTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: GVEGKLKTSSTTAHH*RPAAPLWWWLWCWK
Trigger: TTTCCAACACCACAACCACCACCAAAGCGGTGCTGCAGGCCGTCAGTGATGGGCAGTGGTGGAAGAAGTCTTTAACTTACCTTCGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 90 bp GCACGTCCACACCCTTCCGAAGGCCCTGAAGGATCTGCGCCTGAGTaGAATCCAGGAGACGTTCATTGTAGCAGTGTAACTGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: ARPHPSEGPEGSAPE*NPGDVHCSSVTAWS
Trigger: TGACCAAGCAGTTACACTGCTACAATGAACGTCTCCTGGATTTCACTCAGGCGCAGATCCTTCAGGGCCTTCGGAAGGGTGTGGACGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 90 bp TCCGTAGTGACTGCCGTGATTTGCTCCAGTGCCATCTCGTGCAGATaGTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATGGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVVTAVICSSAISCR*SSRLSRRSFRDGSR
Trigger: CCTGCTTCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423602.1
CDS CCA 90 bp GTGGACTGCTGCAACAACACCTTCCAGGACCTTCAGTGGGTCCCTTaGCCCACCAAGGTCAGCACTGCCACCACTCAATGCAGAAATTAT +
Preference number: 5 (lower is better)
Translates to: VDCCNNTFQDLQWVP*PTKVSTATTQCRNY
Trigger: ATAATTTCTGCATTGAGTGGTGGCAGTGCTGACCTTGGTGGGCCAAGGGACCCACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS CCA 90 bp GGTTCTCACCTGCAACCCTCAGCAGCTCAGCAAGGCCCAGAAGCTTaGTGGATTGTTTATAGCATGTGGGGGACTGGGAAATACACTCCT +
Preference number: 5 (lower is better)
Translates to: GSHLQPSAAQQGPEA*WIVYSMWGTGKYTP
Trigger: AGGAGTGTATTTCCCAGTCCCCCACATGCTATAAACAATCCACCAAGCTTCTGGGCCTTGCTGAGCTGCTGAGGGTTGCAGGTGAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGCAGGCAGCATCTGCTaGGTGTTATACAAAGAGCGA +
Preference number: 5 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPAGSIC*VLYKER
Trigger: TCGCTCTTTGTATAACACCAAGCAGATGCTGCCTGC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCAGTGACTGCCGTGATTaGCTCCAGTGCCATCTCGTG +
Preference number: 5 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRASDCRD*LQCHLV
Trigger: CACGAGATGGCACTGGAGCAAATCACGGCAGTCACT...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS TCA 90 bp ACATTCTGCTGCATAGTTAACATGTCTTGCAGCAACGTTCTCCAATaGGACTCACTGACAGGAGGCTGCTTCCGGCCAGTGTGCCTCGTC +
Preference number: 5 (lower is better)
Translates to: TFCCIVNMSCSNVLQ*DSLTGGCFRPVCLV
Trigger: GACGAGGCACACTGGCCGGAAGCAGCCTCCTGTCAGTGAGTCTCATTGGAGAACGTTGCTGCAAGACATGTTAACTATGCAGCAGAATGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS GCA 90 bp TTTGACCCCATTCCCCTTGTTGCTTCAGAGATGGAATCGCCCAGATaGTCAGTTTCCCTGAGAAGTGAATGGCTGCCAGGAGCATCCCAT +
Preference number: 5 (lower is better)
Translates to: FDPIPLVASEMESPR*SVSLRSEWLPGASH
Trigger: ATGGGATGCTCCTGGCAGCCATTCACTTCTCAGGGAAACTGAGCATCTGGGCGATTCCATCTCTGAAGCAACAAGGGGAATGGGGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000427792.1
CDS GCA 90 bp CAAATGTCCACGGACAGAGAAGTGGTAAACAGGTTCCGGCCAGTGTaGCTCGTCAATCTAACCATCAGCTTGCGTGCCTCTTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: QMSTDREVVNRFRPV*LVNLTISLRASSEL
Trigger: TAGCTCAGAAGAGGCACGCAAGCTGATGGTTAGATTGACGAGGCACACTGGCCGGAACCTGTTTACCACTTCTCTGTCCGTGGACATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429842.1
CDS GCA 90 bp TGGTCCCTAGAAGATATCCGTAGTGACTGCCGTGATTTGCTCCAGTaGCATCTCGTGCAGATGCTCATCTCGGCTCTCGAGGAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: WSLEDIRSDCRDLLQ*HLVQMLISALEEKF
Trigger: AAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGATATCTTCTAGGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423602.1
CDS-3UTR CAA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCGAAAGTTGGACAGAATaGCAAGGCGATGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPESWTE*QGDEEA
Trigger: TGCTTCCTCATCGCCTTGCAATTCTGTCCAACTTTC...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCTGCACTCTAGTGCTATaGCCATCAGTTGGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPCTLVL*PSVGPD
Trigger: ATCAGGACCAACTGATGGCAATAGCACTAGAGTGCA...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCCCAAGGTCATGTCATTaGGCAAGGCTTCACTTGCTA +
Preference number: 5 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPPRSCH*ARLHLL
Trigger: TAGCAAGTGAAGCCTTGCCAAATGACATGACCTTGG...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATACCAGCTCCTCACCCTaGTCCACACTGGCGTGGACT +
Preference number: 5 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHTSSSP*STLAWT
Trigger: AGTCCACGCCAGTGTGGACAAGGGTGAGGAGCTGGT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 90 bp AAGATATCCGTAGTGACTGCCGTGATTTGCTCCAGTGCCATCTCGTaGAGATGCTCATCTCGGCTCTCGAGGAGAAGTTTCAGAGATGGA +
Preference number: 5 (lower is better)
Translates to: KISVVTAVICSSAIS*RCSSRLSRRSFRDG
Trigger: TCCATCTCTGAAACTTCTCCTCGAGAGCCGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGATATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423602.1
CDS CCA 90 bp CGTGGAGCGCAAACTCACAAGGCGGTAGTTTTTAGTAATGGTTCGTaGGCGTTTCCGTGGTGGTGCAAATCGCTCCATTTCAGTCACCAA +
Preference number: 5 (lower is better)
Translates to: RGAQTHKAVVFSNGS*AFPWWCKSLHFSHQ
Trigger: TTGGTGACTGAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAACTACCGCCTTGTGAGTTTGCGCTCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 90 bp TTTGGGATCAGCCCTGTAAAGAGGATGGCACTTGTCCCTGAAACATaGGGCCAATCGGGCATAGATCTGGAGGCTATAGTAATACGCTGC +
Preference number: 5 (lower is better)
Translates to: FGISPVKRMALVPET*GQSGIDLEAIVIRC
Trigger: GCAGCGTATTACTATAGCCTCCAGATCTATGCCCGATTGGCCCCATGTTTCAGGGACAAGTGCCATCCTCTTTACAGGGCTGATCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACACCGCTTTGGTGGTGGTaGTGGTGTTGGAAAGGACTT +
Preference number: 5 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATPLWWW*WCWKGL
Trigger: AAGTCCTTTCCAACACCACAACCACCACCAAAGCGG...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCCGGCAGATACACATGTaGCTTCTGGGAACAGCATTC +
Preference number: 5 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRARQIHM*LLGTAF
Trigger: GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCG...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS TCA 90 bp GTAGTGGGGTTTCCCTTTATGGGCTATACCAGCTGGAGGATTTTCTaGACAAGCACTGCAGTGCATCATCTGTCCAGCCAGGTGGATGTT +
Preference number: 5 (lower is better)
Translates to: VVGFPFMGYTSWRIF*TSTAVHHLSSQVDV
Trigger: AACATCCACCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAAATCCTCCAGCTGGTATAGCCCATAAAGGGAAACCCCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS GCA 90 bp TCCCTTTATGGGCTATACCAGCTGGAGGATTTTCTGAACAAGCACTaGAGTGCATCATCTGTCCAGCCAGGTGGATGTTTTCAAGGCGAC +
Preference number: 5 (lower is better)
Translates to: SLYGLYQLEDFLNKH*SASSVQPGGCFQGD
Trigger: GTCGCCTTGAAAACATCCACCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAAATCCTCCAGCTGGTATAGCCCATAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS CCA 90 bp ACTCACAAGGCGGTAGTTTTTAGTAATGGTTCGTGGGCGTTTCCGTaGTGGTGCAAATCGCTCCATTTCAGTCACCAAGTAAAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: THKAVVFSNGSWAFP*WCKSLHFSHQVKAL
Trigger: CAGGGCCTTTACTTGGTGACTGAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAACTACCGCCTTGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGATGCACCATGTTTTaGGTTGCCTCTAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATGCTMF*VASRLY
Trigger: GTACAGCCTAGAGGCAACCAAAAACATGGTGCATCC...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGTTGACCCCATTCCCCTaGTTGCTTCAGAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWLTPFP*LLQRWN
Trigger: ATTCCATCTCTGAAGCAACAAGGGGAATGGGGTCAA...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGCCGCTTTGGTGGTGGTaGTGGTGTTGGAAAGGACTT +
Preference number: 5 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRPLWWW*WCWKGL
Trigger: AAGTCCTTTCCAACACCACAACCACCACCAAAGCGG...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGCCTGCAGCACCGCTTaGGTGGTGGTTGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLACSTA*VVVVVL
Trigger: CAACACCACAACCACCACCAAAGCGGTGCTGCAGGC...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGCCAAGGTCATGTCATTaGGCAAGGCTTCACTTGCTA +
Preference number: 5 (lower is better)
Translates to: WEQHSTPDAFSAKEQGHRPRSCH*ARLHLL
Trigger: TAGCAAGTGAAGCCTTGCCAAATGACATGACCTTGG...CCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGCAGGCAGCATCTGCTaGGTGTTATACAAAGAGCGA +
Preference number: 5 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATAGSIC*VLYKER
Trigger: TCGCTCTTTGTATAACACCAAGCAGATGCTGCCTGC...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp CAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGCCCAGTTCTTGGTCACAATaGGAATCATTCACCGTAGTG +
Preference number: 5 (lower is better)
Translates to: QHSTPDAFSAKEQGHRWPSSWSQ*ESFTVV
Trigger: CACTACGGTGAATGATTCCAATTGTGACCAAGAACT...GGGCCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTGCATCCCAGCGCCCTaGCTGGAGGCTAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: FAICWNHGEQSADTHVASCIPAP*LEASQE
Trigger: CTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGATGCA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS GCA 90 bp TTATGGGCTATACCAGCTGGAGGATTTTCTGAACAAGCACTGCAGTaGATCATCTGTCCAGCCAGGTGGATGTTTTCAAGGCGACTAGAG +
Preference number: 5 (lower is better)
Translates to: LWAIPAGGFSEQALQ*IICPARWMFSRRLE
Trigger: CTCTAGTCGCCTTGAAAACATCCACCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAAATCCTCCAGCTGGTATAGCCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS CCA 90 bp CACAAGGCGGTAGTTTTTAGTAATGGTTCGTGGGCGTTTCCGTGGTaGTGCAAATCGCTCCATTTCAGTCACCAAGTAAAGGCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: HKAVVFSNGSWAFPW*CKSLHFSHQVKALF
Trigger: AAACAGGGCCTTTACTTGGTGACTGAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAACTACCGCCTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCAATTCCATCCTGTTCTaGTCCCTGGCGACTGTAAAA +
Preference number: 5 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRANSILF*SLATVK
Trigger: TTTTACAGTCGCCAGGGACAAGAACAGGATGGAATT...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp AGAGAGCCTCCAATCAGGATTAAGGTCATCATAGCCTGGAGTCTGGTGAAATTGACCCCATTCCCCTTGTaGCTTCAGAGATGGAATCGC +
Preference number: 5 (lower is better)
Translates to: REPPIRIKVIIAWSLVKLTPFPL*LQRWNR
Trigger: GCGATTCCATCTCTGAAGCAACAAGGGGAATGGGGT...CAATTTCACCAGACTCCAGGCTATGATGACCTTAATCCTGATTGGAGGCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR CAA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCAGGTTGGTAGAAGAATaGAAGTACTCTCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRARLVEE*KYSLLA
Trigger: TGCCAGCAGAGAGTACTTCAATTCTTCTACCAACCT...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATAAAAGCCATGAGCTCTaGACGAGTGGCCAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHKSHEL*TSGQVL
Trigger: CAGGACTTGGCCACTCGTCAAGAGCTCATGGCTTTT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGAATAGGTCAGCTGAATaGCTACCTGGAACACCTACT +
Preference number: 5 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWNRSAE*LPGTPT
Trigger: AGTAGGTGTTCCAGGTAGCAATTCAGCTGACCTATT...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAGGTGGTTGGCAAGGCTTCACTaGCTAGTTGCAAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: EQHSTPDAFSAKEQGHRWLARLH*LVAREL
Trigger: AAGTTCTCTTGCAACTAGCAAGTGAAGCCTTGCCAA...CCACCTGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCTGCCTGGTGACCATCTaGATTAGTTCTTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: ASGNSIQLQMLFLLRSRACLVTI*ISSLGS
Trigger: TGATCCCAAAGAACTAATCAAGATGGTCACCAGGCA...GGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGCAGCTGCTGAATCATaGCTAGAGGCTGACCATCTA +
Preference number: 5 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAAAAES*LEADHL
Trigger: TAGATGGTCAGCCTCTAGCAATGATTCAGCAGCTGC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCCTCTGCACTATATCCTaGGGTGAGATGTCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: CWNHGEQSADTHVASGNSLCTIS*GEMSRG
Trigger: CCCTCTTGACATCTCACCCAAGGATATAGTGCAGAG...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTTGCATCCCAGCGCCCTaGCTGGAGGCTAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLCIPAP*LEASQE
Trigger: CTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGATGCA...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTGCATCCCAGCGCCCTaGCTGGAGGCTAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMCIPAP*LEASQE
Trigger: CTCTTGGCTAGCCTCCAGCAAGGGCGCTGGGATGCA...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGCGGCAGATACACATGTaGCTTCTGGGAACAGCATTC +
Preference number: 5 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRRQIHM*LLGTAF
Trigger: GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCG...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS TCA 90 bp TTAGTTCTTTGGGATCAGCCCTGTAAAGAGGATGGCACTTGTCCCTaGAACATGGGGCCAATCGGGCATAGATCTGGAGGCTATAGTAAT +
Preference number: 5 (lower is better)
Translates to: LVLWDQPCKEDGTCP*NMGPIGHRSGGYSN
Trigger: ATTACTATAGCCTCCAGATCTATGCCCGATTGGCCCCATGTTTCAGGGACAAGTGCCATCCTCTTTACAGGGCTGATCCCAAAGAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 90 bp ATCAAAGTACTTCATGCAGACATCATAGGCATGAAGCCACTCCGGTaGAGAGCCTGGGACTTGTTTAATGAGATGAGGGTCTCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: IKVLHADIIGMKPLR*RAWDLFNEMRVSSP
Trigger: TGGACTGGAGACCCTCATCTCATTAAACAAGTCCCAGGCTCTTCACCGGAGTGGCTTCATGCCTATGATGTCTGCATGAAGTACTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 90 bp TGTAACTGCTTGGTCAGTGAAATAAGGTCTTCAGGCCAGGCTTCGTaGTCATGTCGAGTCACATGCCTGGTGACCATCTTGATTAGTTCT +
Preference number: 5 (lower is better)
Translates to: CNCLVSEIRSSGQAS*SCRVTCLVTILISS
Trigger: AGAACTAATCAAGATGGTCACCAGGCATGTGACTCGACATGAGCACGAAGCCTGGCCTGAAGACCTTATTTCACTGACCAAGCAGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 90 bp GCACTGCCACCACTCAATGCAGAAATTATTTTCATGATTGCACTCTaGACTATATCCTTGGGTGAGATGTCAAGAGGGCCAACTGCCACC +
Preference number: 5 (lower is better)
Translates to: ALPPLNAEIIFMIAL*TISLGEMSRGPTAT
Trigger: GGTGGCAGTTGGCCCTCTTGACATCTCACCCAAGGATATAGTGCAGAGTGCAATCATGAAAATAATTTCTGCATTGAGTGGTGGCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS CCA 90 bp GCAGCAAAACAGAATATTCATGTGGAGAAGTGGTCTCTGGAAAGTTaGACAGAATTGCAAGGCGATGAGGAAGCAGGTCGGAACCATGGT +
Preference number: 5 (lower is better)
Translates to: AAKQNIHVEKWSLES*TELQGDEEAGRNHG
Trigger: ACCATGGTTCCGACCTGCTTCCTCATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACATGAATATTCTGTTTTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCTGCACTCTAGTGCTATaGCCATCAGTTGGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: CWNHGEQSADTHVASGNSCTLVL*PSVGPD
Trigger: ATCAGGACCAACTGATGGCAATAGCACTAGAGTGCA...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTAGGGCACAATCGCACTaGCAAAGGCAGGATCTTTAC +
Preference number: 5 (lower is better)
Translates to: WNHGEQSADTHVASGNSIRAQSH*QRQDLY
Trigger: GTAAAGATCCTGCCTTTGCAAGTGCGATTGTGCCCT...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATAGGGCACAATCGCACTaGCAAAGGCAGGATCTTTAC +
Preference number: 5 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHRAQSH*QRQDLY
Trigger: GTAAAGATCCTGCCTTTGCAAGTGCGATTGTGCCCT...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACAAATAGGTCAGCTGAATaGCTACCTGGAACACCTACT +
Preference number: 5 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATNRSAE*LPGTPT
Trigger: AGTAGGTGTTCCAGGTAGCAATTCAGCTGACCTATT...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCCACATTGGCAAGGCTTCACTaGCTAGTTGCAAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: SGNSIQLQMLFLLRSRATLARLH*LVAREL
Trigger: AAGTTCTCTTGCAACTAGCAAGTGAAGCCTTGCCAA...TGTGGCCCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTACCAGCTCCTCACCCTaGTCCACACTGGCGTGGACT +
Preference number: 5 (lower is better)
Translates to: LFAICWNHGEQSADTHVATSSSP*STLAWT
Trigger: AGTCCACGCCAGTGTGGACAAGGGTGAGGAGCTGGT...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 90 bp AATTCTTCAAGACATCCAACGGCTTGGATAAGATCTAGCTCCTCTTaGATGGCAGGGGGTCTGTCTGTTATCAGTTGTAAGCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: NSSRHPTAWIRSSSS*MAGGLSVISCKQHL
Trigger: CAGGTGCTGCTTACAACTGATAACAGACAGACCCCCTGCCATTCAAGAGGAGCTAGATCTTATCCAAGCCGTTGGATGTCTTGAAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS GCA 90 bp AAGGCGGTAGTTTTTAGTAATGGTTCGTGGGCGTTTCCGTGGTGGTaGAAATCGCTCCATTTCAGTCACCAAGTAAAGGCCCTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: KAVVFSNGSWAFPWW*KSLHFSHQVKALFY
Trigger: ATAAAACAGGGCCTTTACTTGGTGACTGAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAACTACCGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS GCA 90 bp CAAGCCAACTCCTCGCACCAATCTTTAGCTCGGTGTTTATGTTCATaGCAAGGAATGATCATCAGGGAGTCACCGTTAAAACAAGCTTCG +
Preference number: 5 (lower is better)
Translates to: QANSSHQSLARCLCS*QGMIIRESPLKQAS
Trigger: CGAAGCTTGTTTTAACGGTGACTCCCTGATGATCATTCCTTGGCATGAACATAAACACCGAGCTAAAGATTGGTGCGAGGAGTTGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 90 bp CTTAGTAACTCAGGCTGTGCAGCATACAAGAATTCACTTTCATCTTaGAGATTCGGCTCAACAACCATTCTGCAAGCCAACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: LSNSGCAAYKNSLSS*RFGSTTILQANSSH
Trigger: GTGCGAGGAGTTGGCTTGCAGAATGGTTGTTGAGCCGAATCTCCAAGATGAAAGTGAATTCTTGTATGCTGCACAGCCTGAGTTACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 90 bp GGATTTTCTGAACAAGCACTGCAGTGCATCATCTGTCCAGCCAGGTaGATGTTTTCAAGGCGACTAGAGCACAGAAGGCTTTCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: GFSEQALQCIICPAR*MFSRRLEHRRLSVN
Trigger: ATTTACAGAAAGCCTTCTGTGCTCTAGTCGCCTTGAAAACATCCACCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS CCA 90 bp TGCCAATTTTCCAGTTCTCAGCAATACTTCTGCAAAGCTTTCCACTaGAACATGCTGATAGGTGTCATAGGTCCCTTCAGACTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: CQFSSSQQYFCKAFH*NMLIGVIGPFRLSD
Trigger: GTCGCTGAGTCTGAAGGGACCTATGACACCTATCAGCATGTTCCAGTGGAAAGCTTTGCAGAAGTATTGCTGAGAACTGGAAAATTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGACCCCATTCCCCTTGTaGCTTCAGAGATGGAATCGC +
Preference number: 5 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLTPFPL*LQRWNR
Trigger: GCGATTCCATCTCTGAAGCAACAAGGGGAATGGGGT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCTCCACTGGTAGGCACTaGTCACATATTTATCCTCAG +
Preference number: 5 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFSTGRH*SHIYPQ
Trigger: CTGAGGATAAATATGTGACAAGTGCCTACCAGTGGA...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCCCATGTCATGAAGCTTaGTGGTTGCCTCTGTCTTAT +
Preference number: 5 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFPCHEA*WLPLSY
Trigger: ATAAGACAGAGGCAACCACAAAGCTTCATGACATGG...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATGGGAAATACACTCCTaGATGAGACTGATCCGATCA +
Preference number: 5 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAWEIHS*MRLIRS
Trigger: TGATCGGATCAGTCTCATCAAGGAGTGTATTTCCCA...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGAAAAGCCATGAGCTCTaGACGAGTGGCCAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLKSHEL*TSGQVL
Trigger: CAGGACTTGGCCACTCGTCAAGAGCTCATGGCTTTT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGTGGTGGTTGTGGTGTaGGAAAGGACTTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWVVVVV*ERTFMV
Trigger: CACCATGAAAGTCCTTTCCAACACCACAACCACCAC...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCGGAGACACTGTAACGTaGTGCCAGAGAAATAGCAAT +
Preference number: 5 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFGDTVT*CQRNSN
Trigger: ATTGCTATTTCTCTGGCACAACGTTACAGTGTCTCC...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACGCTTCCACAGACAGCTaGGTCACAGCTTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: ICWNHGEQSADTHVASGNASTDS*VTAFGE
Trigger: TTCTCCAAAAGCTGTGACCAAGCTGTCTGTGGAAGC...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGCAGGCAGCATCTGCTaGGTGTTATACAAAGAGCGA +
Preference number: 5 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWAGSIC*VLYKER
Trigger: TCGCTCTTTGTATAACACCAAGCAGATGCTGCCTGC...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTAGTGACTGCCGTGATTaGCTCCAGTGCCATCTCGTG +
Preference number: 5 (lower is better)
Translates to: FAICWNHGEQSADTHVASSDCRD*LQCHLV
Trigger: CACGAGATGGCACTGGAGCAAATCACGGCAGTCACT...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp CTGGTTAGCATCACTGTAGCTAGTCTCACCCATGGATTATTGGTTATGACATATAGCTATGTCTACCCCTaGTCCACACTGGCGTGGACT +
Preference number: 5 (lower is better)
Translates to: LVSITVASLTHGLLVMTYSYVYP*STLAWT
Trigger: AGTCCACGCCAGTGTGGACAAGGGGTAGACATAGCT...ATATGTCATAACCAATAATCCATGGGTGAGACTAGCTACAGTGATGCTAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS GCA 90 bp AGAATATTCATGTGGAGAAGTGGTCTCTGGAAAGTTGGACAGAATTaGAAGGCGATGAGGAAGCAGGTCGGAACCATGGTAAGTAAACAG +
Preference number: 5 (lower is better)
Translates to: RIFMWRSGLWKVGQN*KAMRKQVGTMVSKQ
Trigger: CTGTTTACTTACCATGGTTCCGACCTGCTTCCTCATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACATGAATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS GCA 90 bp CAGTCGAATGTGGGTTTCTGGTTTAATGGCACAGTTCCCCAAATCTaGACAGCCACAGTTTTCCAGAAGAGTGAAATAATACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QSNVGFWFNGTVPQI*TATVFQKSEIILQP
Trigger: AGGCTGCAGTATTATTTCACTCTTCTGGAAAACTGTGGCTGTGCAGATTTGGGGAACTGTGCCATTAAACCAGAAACCCACATTCGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 90 bp GTCACCGTTAAAACAAGCTTCGGGCAGCAAAACAGAATATTCATGTaGAGAAGTGGTCTCTGGAAAGTTGGACAGAATTGCAAGGCGATG +
Preference number: 5 (lower is better)
Translates to: VTVKTSFGQQNRIFM*RSGLWKVGQNCKAM
Trigger: CATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACATGAATATTCTGTTTTGCTGCCCGAAGCTTGTTTTAACGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAGAAACAGTGACTTTCTaGGTAGCTCTGATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAETVTF*VALICS
Trigger: GGAACAAATCAGAGCTACCAAGAAAGTCACTGTTTC...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTTCCAAACGAGATCGTTaGGGGGCAAGTTTAATCTCA +
Preference number: 5 (lower is better)
Translates to: WNHGEQSADTHVASGNSISKRDR*GASLIS
Trigger: TGAGATTAAACTTGCCCCCAAACGATCTCGTTTGGA...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCGGATTTCCTCATATGTaGCAAGTCGATCTAAGTAGG +
Preference number: 5 (lower is better)
Translates to: CWNHGEQSADTHVASGNSGFPHM*QVDLSR
Trigger: CCTACTTAGATCGACTTGCAACATATGAGGAAATCC...GCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCCAGAGTAACCAAATaGTCACAGAGAACCAGCAAA +
Preference number: 5 (lower is better)
Translates to: VGTMENNRQIHMLLLGTASRVTK*SQRTSK
Trigger: TTTGCTGGTTCTCTGTGACAATTTGGTTACTCTGGA...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCCATGTCATGAAGCTTaGTGGTTGCCTCTGTCTTAT +
Preference number: 5 (lower is better)
Translates to: WNHGEQSADTHVASGNSIPCHEA*WLPLSY
Trigger: ATAAGACAGAGGCAACCACAAAGCTTCATGACATGG...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACCAGAAGCTTGGTGGATaGTTTATAGCATGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: ICWNHGEQSADTHVASGNQKLGG*FIACGG
Trigger: TCCCCCACATGCTATAAACAATCCACCAAGCTTCTG...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTTGCCTGGTGACCATCTaGATTAGTTCTTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: WNHGEQSADTHVASGNSICLVTI*ISSLGS
Trigger: TGATCCCAAAGAACTAATCAAGATGGTCACCAGGCA...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGTGGTGTACAGAGAGCTaGGGGAAAGCATCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLWCTES*GKASVH
Trigger: ATGGACAGATGCTTTCCCCAAGCTCTCTGTACACCA...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTAGTGACTGCCGTGATTaGCTCCAGTGCCATCTCGTG +
Preference number: 5 (lower is better)
Translates to: LFAICWNHGEQSADTHVASDCRD*LQCHLV
Trigger: CACGAGATGGCACTGGAGCAAATCACGGCAGTCACT...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACGGCAGATACACATGTaGCTTCTGGGAACAGCATTC +
Preference number: 5 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWERQIHM*LLGTAF
Trigger: GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCG...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS CCA 90 bp TTAAGACCTGATGCAACAACCTTAAACTTCTTCAGCAGTCGAATGTaGGTTTCTGGTTTAATGGCACAGTTCCCCAAATCTGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: LRPDATTLNFFSSRM*VSGLMAQFPKSAQP
Trigger: TGGCTGTGCAGATTTGGGGAACTGTGCCATTAAACCAGAAACCCACATTCGACTGCTGAAGAAGTTTAAGGTTGTTGCATCAGGTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 90 bp TTTTGGAGAAAATGTAACTGCATCTACCACAGTGATGAGGTCACCTaGGTGGAGACGATCAAAGTACTTCATGCAGACATCATAGGCATG +
Preference number: 5 (lower is better)
Translates to: FWRKCNCIYHSDEVT*VETIKVLHADIIGM
Trigger: CATGCCTATGATGTCTGCATGAAGTACTTTGATCGTCTCCACCCAGGTGACCTCATCACTGTGGTAGATGCAGTTACATTTTCTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GTGAAAACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCTTGACCCCATTCCCCTaGTTGCTTCAGAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: VKTAVDYIKIHRINCHLPLTPFP*LLQRWN
Trigger: ATTCCATCTCTGAAGCAACAAGGGGAATGGGGTCAA...GGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGTTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR CAA 90 bp ATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACCATGAAGCTTTGTGGTaGCCTCTGTCTTATCACCAT +
Preference number: 5 (lower is better)
Translates to: ICWNHGEQSADTHVASGNHEALW*PLSYHH
Trigger: ATGGTGATAAGACAGAGGCAACCACAAAGCTTCATG...GTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GTTGCTTCTGGGAACAGCATTCAACTCCAGATGCTTTTTCTGCTAAGGAGCAGGGCAAGAGAACTTCAGTaGTTGGAAATACTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VASGNSIQLQMLFLLRSRARELQ*LEILLL
Trigger: AAGGAGAAGTATTTCCAACAACTGAAGTTCTCTTGC...CCTGCTCCTTAGCAGAAAAAGCATCTGGAGTTGAATGCTGTTCCCAGAAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGCAGCTGCTGAATCATaGCTAGAGGCTGACCATCTA +
Preference number: 5 (lower is better)
Translates to: FAICWNHGEQSADTHVASAAAES*LEADHL
Trigger: TAGATGGTCAGCCTCTAGCAATGATTCAGCAGCTGC...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTCTCTGCACTATATCCTaGGGTGAGATGTCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: FAICWNHGEQSADTHVASLCTIS*GEMSRG
Trigger: CCCTCTTGACATCTCACCCAAGGATATAGTGCAGAG...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS GCA 90 bp ATTCACTCTTTGATAAAGAATTTCTGTCTGCAGAGAGCTGCTAGCTaGCAAAAGAAGTTCAATGCTGCTAGGAGGGCAATGTGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: IHSLIKNFCLQRAAS*QKKFNAARRAMCQS
Trigger: GCTTTGACACATTGCCCTCCTAGCAGCATTGAACTTCTTTTGGCAGCTAGCAGCTCTCTGCAGACAGAAATTCTTTATCAAAGAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ACAGCTGTGGATTATATCAAGATTCATCGCATCAACTGCCATCTTCCCACTTACAATTCCATCCTGTTCTaGTCCCTGGCGACTGTAAAA +
Preference number: 5 (lower is better)
Translates to: TAVDYIKIHRINCHLPTYNSILF*SLATVK
Trigger: TTTTACAGTCGCCAGGGACAAGAACAGGATGGAATT...GTAAGTGGGAAGATGGCAGTTGATGCGATGAATCTTGATATAATCCACAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427792.1
CDS-3UTR CAA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGCAGAATTTCCAGGGCTaGTACATTACTTTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLQNFQG*YITFLS
Trigger: GCTCAGGAAAGTAATGTACAAGCCCTGGAAATTCTG...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTAATCTAACCATCAGCTaGCGTGCCTCTTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: FAICWNHGEQSADTHVASNLTIS*RASSEL
Trigger: TAGCTCAGAAGAGGCACGCAAGCTGATGGTTAGATT...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGTGGTGGTTGTGGTGTaGGAAAGGACTTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: LFAICWNHGEQSADTHVAVVVVV*ERTFMV
Trigger: CACCATGAAAGTCCTTTCCAACACCACAACCACCAC...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCAAAAGAGATGAAGGTCTaGGGCTCTATTTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: VGTMENNRQIHMLLLGTAKEMKV*GSIFNF
Trigger: GAAATTGAAAATAGAGCCCAAGACCTTCATCTCTTT...TGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTGGTGTACAGAGAGCTaGGGGAAAGCATCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCWCTES*GKASVH
Trigger: ATGGACAGATGCTTTCCCCAAGCTCTCTGTACACCA...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp GGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTCCTCACCCATGGATTATaGGTTATGACATATTCACTT +
Preference number: 5 (lower is better)
Translates to: GTMENNRQIHMLLLGTAFLTHGL*VMTYSL
Trigger: AAGTGAATATGTCATAACCAATAATCCATGGGTGAG...GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTTTCCCCAATCCTTCCTaGTTCTCCATCGTACATCTG +
Preference number: 5 (lower is better)
Translates to: FAICWNHGEQSADTHVASFPNPS*FSIVHL
Trigger: CAGATGTACGATGGAGAACAAGGAAGGATTGGGGAA...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGAGTTCTTGGTCACAATaGGAATCATTCACCGTAGTG +
Preference number: 5 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWSSWSQ*ESFTVV
Trigger: CACTACGGTGAATGATTCCAATTGTGACCAAGAACT...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCGGCAGATACACATGTaGCTTCTGGGAACAGCATTC +
Preference number: 5 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLRQIHM*LLGTAF
Trigger: GAATGCTGTTCCCAGAAGCAACATGTGTATCTGCCG...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGAGTTCTTGGTCACAATaGGAATCATTCACCTCTGCA +
Preference number: 5 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWSSWSQ*ESFTSA
Trigger: TGCAGAGGTGAATGATTCCAATTGTGACCAAGAACT...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433283.5
CDS-3UTR CAA 90 bp TGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGATCAGGAATAATTTTTaGCTGCAGCTGCCGAGCATA +
Preference number: 5 (lower is better)
Translates to: CNLLEPWRTIGRYTCCFWIRNNF*LQLPSI
Trigger: TATGCTCGGCAGCTGCAGCAAAAAATTATTCCTGAT...CCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442506.5
CDS GCA 90 bp TTTATTTTTAGCCTCTGCCAATTTTCCAGTTCTCAGCAATACTTCTaGAAAGCTTTCCACTGGAACATGCTGATAGGTGTCATAGGTCCC +
Preference number: 5 (lower is better)
Translates to: FIFSLCQFSSSQQYF*KAFHWNMLIGVIGP
Trigger: GGGACCTATGACACCTATCAGCATGTTCCAGTGGAAAGCTTTGCAGAAGTATTGCTGAGAACTGGAAAATTGGCAGAGGCTAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGCCAAAAGCTTTCCATaGCTTGCAAGTACCAAATGC +
Preference number: 5 (lower is better)
Translates to: FAICWNHGEQSADTHVASAKSFP*LASTKC
Trigger: GCATTTGGTACTTGCAAGCAATGGAAAGCTTTTGGC...AGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATCTGCTCCTTTCCCTATaGCTAAAAGAGCCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: FHTVLFAICWNHGEQSADLLLSL*LKEPPG
Trigger: ACCTGGAGGCTCTTTTAGCAATAGGGAAAGGAGCAG...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATTTGTTCCAGTGTCAACTaGGAAAAGTTCACTAATTTC +
Preference number: 5 (lower is better)
Translates to: WNHGEQSADTHVASGNSICSSVN*EKFTNF
Trigger: GAAATTAGTGAACTTTTCCAAGTTGACACTGGAACA...AATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCTATCAGTGAGGTaGGTAGAAGAATTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWEQLSVR*VEELKY
Trigger: GTACTTCAATTCTTCTACCAACCTCACTGATAGCTG...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACGCTTCCACAGACAGCTaGGTCACAGCTTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHASTDS*VTAFGE
Trigger: TTCTCCAAAAGCTGTGACCAAGCTGTCTGTGGAAGC...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGCAGCTGCTGAATCATaGCTAGAGGCTGACCATCTA +
Preference number: 5 (lower is better)
Translates to: TVLFAICWNHGEQSADTHAAAES*LEADHL
Trigger: TAGATGGTCAGCCTCTAGCAATGATTCAGCAGCTGC...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACTCTGCACTATATCCTaGGGTGAGATGTCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: HTVLFAICWNHGEQSADTLCTIS*GEMSRG
Trigger: CCCTCTTGACATCTCACCCAAGGATATAGTGCAGAG...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACAGCATCTCACCCATGGATTATaGGTTATGACATATTCACTT +
Preference number: 5 (lower is better)
Translates to: LEPWRTIGRYTCCFWEQHLTHGL*VMTYSL
Trigger: AAGTGAATATGTCATAACCAATAATCCATGGGTGAG...ATGCTGTTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp ATCACTGTAGCTAGTCTCACCCATGGATTATTGGTTATGACATATTCACTTTTCGCAGGCAGCATCTGCTaGGTGTTATACAAAGAGCGA +
Preference number: 5 (lower is better)
Translates to: ITVASLTHGLLVMTYSLFAGSIC*VLYKER
Trigger: TCGCTCTTTGTATAACACCAAGCAGATGCTGCCTGC...GAAAAGTGAATATGTCATAACCAATAATCCATGGGTGAGACTAGCTACAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS-3UTR CAA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCACGGCAAAGTTCCTTTaGTTCCAGTGTCAACTTGGA +
Preference number: 5 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCTAKFL*FQCQLG
Trigger: TCCAAGTTGACACTGGAACAAAAGGAACTTTGCCGT...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp CCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACCATGAAGCTTTGTGGTaGCCTCTGTCTTATCACCAT +
Preference number: 5 (lower is better)
Translates to: PYSFICNLLEPWRTIGRYHEALW*PLSYHH
Trigger: ATGGTGATAAGACAGAGGCAACCACAAAGCTTCATG...GTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATAATCTAACCATCAGCTaGCGTGCCTCTTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: FHTVLFAICWNHGEQSADNLTIS*RASSEL
Trigger: TAGCTCAGAAGAGGCACGCAAGCTGATGGTTAGATT...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTGGGAAATACACTCCTaGATGAGACTGATCCGATCA +
Preference number: 5 (lower is better)
Translates to: LFAICWNHGEQSADTHVAWEIHS*MRLIRS
Trigger: TGATCGGATCAGTCTCATCAAGGAGTGTATTTCCCA...AGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp CATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACAGAAGCTTGGTGGATaGTTTATAGCATGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: HTVLFAICWNHGEQSADTQKLGG*FIACGG
Trigger: TCCCCCACATGCTATAAACAATCCACCAAGCTTCTG...TGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTGGCTGTAGTTCCGATTaGATATGCACCACCACATTT +
Preference number: 5 (lower is better)
Translates to: YLQFVGTMENNRQIHMLLGCSSD*ICTTTF
Trigger: AAATGTGGTGGTGCATATCAAATCGGAACTACAGCC...AAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATTTCCCCAATCCTTCCTaGTTCTCCATCGTACATCTG +
Preference number: 5 (lower is better)
Translates to: TVLFAICWNHGEQSADTHFPNPS*FSIVHL
Trigger: CAGATGTACGATGGAGAACAAGGAAGGATTGGGGAA...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATTTCCCCAATCCTTCCTaGTTCTCCATCGTACATCTG +
Preference number: 5 (lower is better)
Translates to: FHTVLFAICWNHGEQSADFPNPS*FSIVHL
Trigger: CAGATGTACGATGGAGAACAAGGAAGGATTGGGGAA...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS-3UTR CAA 90 bp TTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCAAAGCTTTCCATTGCTaGCAAGTACCAAATGCCAGT +
Preference number: 5 (lower is better)
Translates to: FICNLLEPWRTIGRYTCCKAFHC*QVPNAS
Trigger: ACTGGCATTTGGTACTTGCAAGCAATGGAAAGCTTT...GCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATCGGGTCTTTCGGAACTaGACATTTCCCAATAATGGA +
Preference number: 5 (lower is better)
Translates to: FHTVLFAICWNHGEQSADRVFRN*TFPNNG
Trigger: TCCATTATTGGGAAATGTCAAGTTCCGAAAGACCCG...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGGAATTCACTTTCATCTaGGAGATTCGGCTCAACAAC +
Preference number: 5 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMEFTFI*EIRLNN
Trigger: GTTGTTGAGCCGAATCTCCAAGATGAAAGTGAATTC...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGATCAGGAATAATTTTTaGCTGCAGATCTGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLIRNNF*LQIWFG
Trigger: TCCAAACCAGATCTGCAGCAAAAAATTATTCCTGAT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp CAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTGCTATTGCCATCAGTaGGTCCTGATCAGGAATAAT +
Preference number: 5 (lower is better)
Translates to: QFYLQFVGTMENNRQIHMCYCHQ*VLIRNN
Trigger: ATTATTCCTGATCAGGACCAACTGATGGCAATAGCA...CATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACGGCTGTAGTTCCGATTaGATATGCACCACCACATTT +
Preference number: 5 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHGCSSD*ICTTTF
Trigger: AAATGTGGTGGTGCATATCAAATCGGAACTACAGCC...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTCCATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATGGAGACACTGTAACGTaGTGCCAGAGAAATAGCAAT +
Preference number: 5 (lower is better)
Translates to: FHTVLFAICWNHGEQSADGDTVT*CQRNSN
Trigger: ATTGCTATTTCTCTGGCACAACGTTACAGTGTCTCC...ATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp TTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGAAAGAGATGAAGGTCTaGGGCTCTATTTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: LQFVGTMENNRQIHMLLLKEMKV*GSIFNF
Trigger: GAAATTGAAAATAGAGCCCAAGACCTTCATCTCTTT...CAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp AATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATGTTGCTTCTGGGAACTCACCCATGGATTATaGGTTATGACATATTCACTT +
Preference number: 5 (lower is better)
Translates to: NLLEPWRTIGRYTCCFWELTHGL*VMTYSL
Trigger: AAGTGAATATGTCATAACCAATAATCCATGGGTGAG...TTCCCAGAAGCAACATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000433283.5
ENST00000442506.5
CDS CCA 90 bp TCACCAAGTAAAGGCCCTGTTTTATATAACCAAAGTAGCGAGCCTTaGCAGATATTTCATAATCAGAATCAGAATCCTCTTCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: SPSKGPVLYNQSSEP*QIFHNQNQNPLLLH
Trigger: ATGAAGGAGAAGAGGATTCTGATTCTGATTATGAAATATCTGCCAAGGCTCGCTACTTTGGTTATATAAAACAGGGCCTTTACTTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS-3UTR CAA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATTGCTATTGCCATCAGTaGGTCCTGATCAGGAATAAT +
Preference number: 5 (lower is better)
Translates to: TVLFAICWNHGEQSADTHCYCHQ*VLIRNN
Trigger: ATTATTCCTGATCAGGACCAACTGATGGCAATAGCA...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS-3UTR CAA 90 bp ATACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACCAGCTATCAGTGAGGTaGGTAGAAGAATTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: IQFYLQFVGTMENNRQIHQLSVR*VEELKY
Trigger: GTACTTCAATTCTTCTACCAACCTCACTGATAGCTG...GTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 90 bp AATAAGAATAAGATTTGCAATCTGTTTTGCCCTGCTGAGCTGTGTTaGCATTTAGGTCCTGACTTTAGCTGTAACATAAAGAAGAGAACA +
Preference number: 5 (lower is better)
Translates to: NKNKICNLFCPAELC*HLGPDFSCNIKKRT
Trigger: TGTTCTCTTCTTTATGTTACAGCTAAAGTCAGGACCTAAATGGCAACACAGCTCAGCAGGGCAAAACAGATTGCAAATCTTATTCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS-3UTR CAA 90 bp ACAGTTTTATTTGCAATTTGTTGGAACCATGGAGAACAATCGGCAGATACACATATAGCAAAGACAGAGTaGATCATTTCGTTCACAGGT +
Preference number: 5 (lower is better)
Translates to: TVLFAICWNHGEQSADTHIAKTE*IISFTG
Trigger: ACCTGTGAACGAAATGATCAACTCTGTCTTTGCTAT...ATGTGTATCTGCCGATTGTTCTCCATGGTTCCAACAAATTGCAAATAAAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp CTCACCCTCTGCAGTGCCTGGACTCAAAGCCGGCCCTaGCTCGGGGGCCGCCATGTTCGCCGAGGACTCAGG +
Preference number: 6 (lower is better)
Translates to: LTLCSAWTQSRP*LGGRHVRRGLR
Trigger: CCTGAGTCCTCGGCGAACATGGCGGCCCCCGAGTCAGGGCCGGCTTTGAGTCCAGGCACTGCAGAGGGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS TCA 72 bp ACAGAAAGGCCGCAGCCACTCCAGCAGGTCCTCAGGTaGAACCAGCTCCTCACCCTTGTCCACACTGGCGTG +
Preference number: 6 (lower is better)
Translates to: TERPQPLQQVLR*NQLLTLVHTGV
Trigger: CACGCCAGTGTGGACAAGGGTGAGGAGCTGGTTTCACCTGAGGACCTGCTGGAGTGGCTGCGGCCTTTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 72 bp GTGGACTGCTGCAACAACACCTTCCAGGACCTTCAGTaGGTCCCTTGGCCCACCAAGGTCAGCACTGCCACC +
Preference number: 6 (lower is better)
Translates to: VDCCNNTFQDLQ*VPWPTKVSTAT
Trigger: GGTGGCAGTGCTGACCTTGGTGGGCCAAGGGACCCACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS TCA 72 bp ACAGCTCCTTCACACCCTGAAACCACAGAGCAGGGGTaGGCGAGAACTCCACGACGTACTTCTCACCGGCAC +
Preference number: 6 (lower is better)
Translates to: TAPSHPETTEQG*ARTPRRTSHRH
Trigger: GTGCCGGTGAGAAGTACGTCGTGGAGTTCTCGCTCACCCCTGCTCTGTGGTTTCAGGGTGTGAAGGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS GCA 72 bp AACCAGCTCCTCACCCTTGTCCACACTGGCGTGGACTaGTGCAACAACACCTTCCAGGACCTTCAGTGGGTC +
Preference number: 6 (lower is better)
Translates to: NQLLTLVHTGVD*CNNTFQDLQWV
Trigger: GACCCACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGTGAGGAGCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 90 bp CCATCACTGACGGCCTGCAGCACCGCTTTGGTGGTGGTTGTGGTGTaGGAAAGGACTTTCATGGTGGTAGCAGTGGTCCAGCGCAATAGG +
Preference number: 6 (lower is better)
Translates to: PSLTACSTALVVVVV*ERTFMVVAVVQRNR
Trigger: CCTATTGCGCTGGACCACTGCTACCACCATGAAAGTCCTTTCCAACACCACAACCACCACCAAAGCGGTGCTGCAGGCCGTCAGTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 72 bp CAGCTATGTCTACCCCTTGTCCACACTGGCGTGGACTaGTGCAACAACACCTTCCAGGACCTTCAGTGGGTC +
Preference number: 6 (lower is better)
Translates to: QLCLPLVHTGVD*CNNTFQDLQWV
Trigger: GACCCACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGGTAGACATAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS CAA 72 bp ACGGCCTGCAGCACCGCTTTGGTGGTGGTTGTGGTGTaGGAAAGGACTTTCATGGTGGTAGCAGTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: TACSTALVVVVV*ERTFMVVAVVQ
Trigger: CTGGACCACTGCTACCACCATGAAAGTCCTTTCCAACACCACAACCACCACCAAAGCGGTGCTGCAGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 90 bp GACTTCTTCCACCACTGCCCATCACTGACGGCCTGCAGCACCGCTTaGGTGGTGGTTGTGGTGTTGGAAAGGACTTTCATGGTGGTAGCA +
Preference number: 6 (lower is better)
Translates to: DFFHHCPSLTACSTA*VVVVVLERTFMVVA
Trigger: TGCTACCACCATGAAAGTCCTTTCCAACACCACAACCACCACCAAAGCGGTGCTGCAGGCCGTCAGTGATGGGCAGTGGTGGAAGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp ACATGTCTTGCAGCAACGTTCTCCAATGAGACTCACTaGCAGGAGGCTGCTTCCGGCCAGTGTGCCTCGTCA +
Preference number: 6 (lower is better)
Translates to: TCLAATFSNETH*QEAASGQCASS
Trigger: TGACGAGGCACACTGGCCGGAAGCAGCCTCCTGTCAGTGAGTCTCATTGGAGAACGTTGCTGCAAGACATGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS TCA 72 bp GGTAAGTTAAAGACTTCTTCCACCACTGCCCATCACTaGCGGCCTGCAGCACCGCTTTGGTGGTGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: GKLKTSSTTAHH*RPAAPLWWWLW
Trigger: CCACAACCACCACCAAAGCGGTGCTGCAGGCCGTCAGTGATGGGCAGTGGTGGAAGAAGTCTTTAACTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp TGGGATCAGCCCTGTAAAGAGGATGGCACTTGTCCCTaGAACATGGGGCCAATCGGGCATAGATCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: WDQPCKEDGTCP*NMGPIGHRSGG
Trigger: GCCTCCAGATCTATGCCCGATTGGCCCCATGTTTCAGGGACAAGTGCCATCCTCTTTACAGGGCTGATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 72 bp AAAGACTTCTTCCACCACTGCCCATCACTGACGGCCTaGAGCACCGCTTTGGTGGTGGTTGTGGTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: KDFFHHCPSLTA*STALVVVVVLE
Trigger: TTCCAACACCACAACCACCACCAAAGCGGTGCTGCAGGCCGTCAGTGATGGGCAGTGGTGGAAGAAGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 72 bp GAGAACTCCACGACGTACTTCTCACCGGCACGGTTCTaGCTGGATCATTCCACCCCTTTTTCTGTGGTAGCG +
Preference number: 6 (lower is better)
Translates to: ENSTTYFSPARF*LDHSTPFSVVA
Trigger: CGCTACCACAGAAAAAGGGGTGGAATGATCCAGCCAGAACCGTGCCGGTGAGAAGTACGTCGTGGAGTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS GCA 72 bp ACGGACAGAGAAGTGGTAAACAGGTTCCGGCCAGTGTaGCTCGTCAATCTAACCATCAGCTTGCGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: TDREVVNRFRPV*LVNLTISLRAS
Trigger: AGAGGCACGCAAGCTGATGGTTAGATTGACGAGGCACACTGGCCGGAACCTGTTTACCACTTCTCTGTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429842.1
CDS CCA 72 bp CTGCAACCCTCAGCAGCTCAGCAAGGCCCAGAAGCTTaGTGGATTGTTTATAGCATGTGGGGGACTGGGAAA +
Preference number: 6 (lower is better)
Translates to: LQPSAAQQGPEA*WIVYSMWGTGK
Trigger: TTTCCCAGTCCCCCACATGCTATAAACAATCCACCAAGCTTCTGGGCCTTGCTGAGCTGCTGAGGGTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp CACCCTTCCGAAGGCCCTGAAGGATCTGCGCCTGAGTaGAATCCAGGAGACGTTCATTGTAGCAGTGTAACT +
Preference number: 6 (lower is better)
Translates to: HPSEGPEGSAPE*NPGDVHCSSVT
Trigger: AGTTACACTGCTACAATGAACGTCTCCTGGATTTCACTCAGGCGCAGATCCTTCAGGGCCTTCGGAAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 72 bp AATGTCAGCTATGTCTACCCCTTGTCCACACTGGCGTaGACTGCTGCAACAACACCTTCCAGGACCTTCAGT +
Preference number: 6 (lower is better)
Translates to: NVSYVYPLSTLA*TAATTPSRTFS
Trigger: ACTGAAGGTCCTGGAAGGTGTTGTTGCAGCAGTCCACGCCAGTGTGGACAAGGGGTAGACATAGCTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417461.5
CDS CAA 72 bp CCTCAGCAGCTCAGCAAGGCCCAGAAGCTTGGTGGATaGTTTATAGCATGTGGGGGACTGGGAAATACACTC +
Preference number: 6 (lower is better)
Translates to: PQQLSKAQKLGG*FIACGGLGNTL
Trigger: GAGTGTATTTCCCAGTCCCCCACATGCTATAAACAATCCACCAAGCTTCTGGGCCTTGCTGAGCTGCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 72 bp TGGTCCCTAGAAGATATCCGTAGTGACTGCCGTGATTaGCTCCAGTGCCATCTCGTGCAGATGCTCATCTCG +
Preference number: 6 (lower is better)
Translates to: WSLEDIRSDCRD*LQCHLVQMLIS
Trigger: CGAGATGAGCATCTGCACGAGATGGCACTGGAGCAAATCACGGCAGTCACTACGGATATCTTCTAGGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423602.1
CDS CAA 90 bp ACCTGCAACCCTCAGCAGCTCAGCAAGGCCCAGAAGCTTGGTGGATaGTTTATAGCATGTGGGGGACTGGGAAATACACTCCTTGATGAG +
Preference number: 6 (lower is better)
Translates to: TCNPQQLSKAQKLGG*FIACGGLGNTLLDE
Trigger: CTCATCAAGGAGTGTATTTCCCAGTCCCCCACATGCTATAAACAATCCACCAAGCTTCTGGGCCTTGCTGAGCTGCTGAGGGTTGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp TGCATAGTTAACATGTCTTGCAGCAACGTTCTCCAATaGGACTCACTGACAGGAGGCTGCTTCCGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: CIVNMSCSNVLQ*DSLTGGCFRPV
Trigger: CACTGGCCGGAAGCAGCCTCCTGTCAGTGAGTCTCATTGGAGAACGTTGCTGCAAGACATGTTAACTATGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS GCA 72 bp ATTCCCCTTGTTGCTTCAGAGATGGAATCGCCCAGATaGTCAGTTTCCCTGAGAAGTGAATGGCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: IPLVASEMESPR*SVSLRSEWLPG
Trigger: TCCTGGCAGCCATTCACTTCTCAGGGAAACTGAGCATCTGGGCGATTCCATCTCTGAAGCAACAAGGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000427792.1
CDS GCA 72 bp TTGGTCAGTGAAATAAGGTCTTCAGGCCAGGCTTCGTaGTCATGTCGAGTCACATGCCTGGTGACCATCTTG +
Preference number: 6 (lower is better)
Translates to: LVSEIRSSGQAS*SCRVTCLVTIL
Trigger: CAAGATGGTCACCAGGCATGTGACTCGACATGAGCACGAAGCCTGGCCTGAAGACCTTATTTCACTGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 72 bp GAACAAGCACTGCAGTGCATCATCTGTCCAGCCAGGTaGATGTTTTCAAGGCGACTAGAGCACAGAAGGCTT +
Preference number: 6 (lower is better)
Translates to: EQALQCIICPAR*MFSRRLEHRRL
Trigger: AAGCCTTCTGTGCTCTAGTCGCCTTGAAAACATCCACCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS CCA 72 bp GATAACCTGTGGCCATCAGCTCCTGACAATGCATACTaGCTGCTTTGTAGTCATGGAAGCGAAGTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: DNLWPSAPDNAY*LLCSHGSEVPA
Trigger: AGCAGGCACTTCGCTTCCATGACTACAAAGCAGCCAGTATGCATTGTCAGGAGCTGATGGCCACAGGTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 72 bp CATGTGGAGAAGTGGTCTCTGGAAAGTTGGACAGAATaGCAAGGCGATGAGGAAGCAGGTCGGAACCATGGT +
Preference number: 6 (lower is better)
Translates to: HVEKWSLESWTE*QGDEEAGRNHG
Trigger: ACCATGGTTCCGACCTGCTTCCTCATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CAA 72 bp CAGCACCTGGCTAGATCCATGCAGCTATCAGTGAGGTaGGTAGAAGAATTGAAGTACTCTCTGCTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: QHLARSMQLSVR*VEELKYSLLAA
Trigger: GGCTGCCAGCAGAGAGTACTTCAATTCTTCTACCAACCTCACTGATAGCTGCATGGATCTAGCCAGGTGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS CAA 72 bp TCAGCTATGTCTACCTGTCTCTGGGGCCAGGAGGCTTaGAGAATGGCTTCAGTTCTAAAGAACACGAGGAGC +
Preference number: 6 (lower is better)
Translates to: SAMSTCLWGQEA*RMASVLKNTRS
Trigger: GCTCCTCGTGTTCTTTAGAACTGAAGCCATTCTCAAAGCCTCCTGGCCCCAGAGACAGGTAGACATAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp ACCAGGAATATTCCGCTCCATCCCAAGTCGAATAAGTaGCAATGCACAGTCCACCTGCCGAGCATAATGCTC +
Preference number: 6 (lower is better)
Translates to: TRNIPLHPKSNK*QCTVHLPSIML
Trigger: GAGCATTATGCTCGGCAGGTGGACTGTGCATTGTCACTTATTCGACTTGGGATGGAGCGGAATATTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS TCA 72 bp CTTCATGCAGACATCATAGGCATGAAGCCACTCCGGTaGAGAGCCTGGGACTTGTTTAATGAGATGAGGGTC +
Preference number: 6 (lower is better)
Translates to: LHADIIGMKPLR*RAWDLFNEMRV
Trigger: GACCCTCATCTCATTAAACAAGTCCCAGGCTCTTCACCGGAGTGGCTTCATGCCTATGATGTCTGCATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 72 bp ATGTGGAGAAGTGGTCTCTGGAAAGTTGGACAGAATTaGAAGGCGATGAGGAAGCAGGTCGGAACCATGGTA +
Preference number: 6 (lower is better)
Translates to: MWRSGLWKVGQN*KAMRKQVGTMV
Trigger: TACCATGGTTCCGACCTGCTTCCTCATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS GCA 72 bp ACAGTCCACCTGCCGAGCATAATGCTCTATTTCCTCTaGTCTGGTCTGATACCAGTCCATAACCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: TVHLPSIMLYFL*SGLIPVHNLLH
Trigger: GTGGAGAAGGTTATGGACTGGTATCAGACCAGAGCAGAGGAAATAGAGCATTATGCTCGGCAGGTGGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS GCA 72 bp GGGCTATACCAGCTGGAGGATTTTCTGAACAAGCACTaGAGTGCATCATCTGTCCAGCCAGGTGGATGTTTT +
Preference number: 6 (lower is better)
Translates to: GLYQLEDFLNKH*SASSVQPGGCF
Trigger: AAAACATCCACCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAAATCCTCCAGCTGGTATAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS GCA 72 bp TACGCTGCCAGCTGGAGAGATAATGCAGAGGGGGACTaGTTTTCAAAGCACCGGTTAGCATCTAACACTTGT +
Preference number: 6 (lower is better)
Translates to: YAASWRDNAEGD*FSKHRLASNTC
Trigger: ACAAGTGTTAGATGCTAACCGGTGCTTTGAAAAGCAGTCCCCCTCTGCATTATCTCTCCAGCTGGCAGCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 72 bp TCTTCAGGCCAGGCTTCGTGCTCATGTCGAGTCACATaGCTGGTGACCATCTTGATTAGTTCTTTGGGATCA +
Preference number: 6 (lower is better)
Translates to: SSGQASCSCRVT*LVTILISSLGS
Trigger: TGATCCCAAAGAACTAATCAAGATGGTCACCAGGCATGTGACTCGACATGAGCACGAAGCCTGGCCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS GCA 72 bp TTGCTGCAGCTGCCGAGCATAATGCTCTATTTCCTCTaGTCTGGTCTGATACCAGTCCATAACCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: LLQLPSIMLYFL*SGLIPVHNLLH
Trigger: GTGGAGAAGGTTATGGACTGGTATCAGACCAGAGCAGAGGAAATAGAGCATTATGCTCGGCAGCTGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441755.5
ENST00000442506.5
CDS CAA 72 bp GTGGTAGCAGTGGTCCAGCGCAATAGGTCAGCTGAATaGCTACCTGGAACACCTACTTCATCCTCTTGTACT +
Preference number: 6 (lower is better)
Translates to: VVAVVQRNRSAE*LPGTPTSSSCT
Trigger: AGTACAAGAGGATGAAGTAGGTGTTCCAGGTAGCAATTCAGCTGACCTATTGCGCTGGACCACTGCTACCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp AACTCTCCAGGCAGAAAGGCCACAGCTAGAAGCTTTTaGCATGCCTACTTCAGCAGTTTCACATCCACCAAC +
Preference number: 6 (lower is better)
Translates to: NSPGRKATARSF*HAYFSSFTSTN
Trigger: GTTGGTGGATGTGAAACTGCTGAAGTAGGCATGTCAAAAGCTTCTAGCTGTGGCCTTTCTGCCTGGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS GCA 72 bp GTTTTTAGTAATGGTTCGTGGGCGTTTCCGTGGTGGTaGAAATCGCTCCATTTCAGTCACCAAGTAAAGGCC +
Preference number: 6 (lower is better)
Translates to: VFSNGSWAFPWW*KSLHFSHQVKA
Trigger: GGCCTTTACTTGGTGACTGAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS GCA 72 bp ATACCAGCTGGAGGATTTTCTGAACAAGCACTGCAGTaGATCATCTGTCCAGCCAGGTGGATGTTTTCAAGG +
Preference number: 6 (lower is better)
Translates to: IPAGGFSEQALQ*IICPARWMFSR
Trigger: CCTTGAAAACATCCACCTGGCTGGACAGATGATGCACTGCAGTGCTTGTTCAGAAAATCCTCCAGCTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS CCA 72 bp TTTTTGGTTGCCTCTAGGCTGTACTTCAGTCTCCGGTaGCCACTCGGTGTTGACCAACAAGTCATAGAGAAT +
Preference number: 6 (lower is better)
Translates to: FLVASRLYFSLR*PLGVDQQVIEN
Trigger: ATTCTCTATGACTTGTTGGTCAACACCGAGTGGCCACCGGAGACTGAAGTACAGCCTAGAGGCAACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp GCGGTAGTTTTTAGTAATGGTTCGTGGGCGTTTCCGTaGTGGTGCAAATCGCTCCATTTCAGTCACCAAGTA +
Preference number: 6 (lower is better)
Translates to: AVVFSNGSWAFP*WCKSLHFSHQV
Trigger: TACTTGGTGACTGAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAACTACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp CAAACTCACAAGGCGGTAGTTTTTAGTAATGGTTCGTaGGCGTTTCCGTGGTGGTGCAAATCGCTCCATTTC +
Preference number: 6 (lower is better)
Translates to: QTHKAVVFSNGS*AFPWWCKSLHF
Trigger: GAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAACTACCGCCTTGTGAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp CAGAATATTCATGTGGAGAAGTGGTCTCTGGAAAGTTaGACAGAATTGCAAGGCGATGAGGAAGCAGGTCGG +
Preference number: 6 (lower is better)
Translates to: QNIHVEKWSLES*TELQGDEEAGR
Trigger: CCGACCTGCTTCCTCATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACATGAATATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CAA 90 bp AGTTGTAAGCAGCACCTGGCTAGATCCATGCAGCTATCAGTGAGGTaGGTAGAAGAATTGAAGTACTCTCTGCTGGCAGCCAAAACCAAG +
Preference number: 6 (lower is better)
Translates to: SCKQHLARSMQLSVR*VEELKYSLLAAKTK
Trigger: CTTGGTTTTGGCTGCCAGCAGAGAGTACTTCAATTCTTCTACCAACCTCACTGATAGCTGCATGGATCTAGCCAGGTGCTGCTTACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS CAA 90 bp ACTTTCATGGTGGTAGCAGTGGTCCAGCGCAATAGGTCAGCTGAATaGCTACCTGGAACACCTACTTCATCCTCTTGTACTGCTTTACTA +
Preference number: 6 (lower is better)
Translates to: TFMVVAVVQRNRSAE*LPGTPTSSSCTALL
Trigger: TAGTAAAGCAGTACAAGAGGATGAAGTAGGTGTTCCAGGTAGCAATTCAGCTGACCTATTGCGCTGGACCACTGCTACCACCATGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 90 bp CTCAATGCAGAAATTATTTTCATGATTGCACTCTGCACTATATCCTaGGGTGAGATGTCAAGAGGGCCAACTGCCACCTCTAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LNAEIIFMIALCTIS*GEMSRGPTATSSSC
Trigger: GCAGCTGCTAGAGGTGGCAGTTGGCCCTCTTGACATCTCACCCAAGGATATAGTGCAGAGTGCAATCATGAAAATAATTTCTGCATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS TCA 72 bp AGACATCCAACGGCTTGGATAAGATCTAGCTCCTCTTaGATGGCAGGGGGTCTGTCTGTTATCAGTTGTAAG +
Preference number: 6 (lower is better)
Translates to: RHPTAWIRSSSS*MAGGLSVISCK
Trigger: CTTACAACTGATAACAGACAGACCCCCTGCCATTCAAGAGGAGCTAGATCTTATCCAAGCCGTTGGATGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS GCA 72 bp CATAAAAACTTCCCAGCGGGAGACACTGTAACGTTGTaGCAGAGAAATAGCAATGCTGTAGACGCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: HKNFPAGDTVTL*QRNSNAVDAFL
Trigger: GAGGAAAGCGTCTACAGCATTGCTATTTCTCTGGCACAACGTTACAGTGTCTCCCGCTGGGAAGTTTTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 72 bp ATTGCTTTCGTGATGATAAAGGATGCACCATGTTTTTaGTTGCCTCTAGGCTGTACTTCAGTCTCCGGTGGC +
Preference number: 6 (lower is better)
Translates to: IAFVMIKDAPCF*LPLGCTSVSGG
Trigger: GCCACCGGAGACTGAAGTACAGCCTAGAGGCAACCAAAAACATGGTGCATCCTTTATCATCACGAAAGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp CTCTTCACTTTCAATCTTCCTCTGATAAAGTTCCTCTaGTGTCGTGGAGCGCAAACTCACAAGGCGGTAGTT +
Preference number: 6 (lower is better)
Translates to: LFTFNLPLIKFL*CRGAQTHKAVV
Trigger: AACTACCGCCTTGTGAGTTTGCGCTCCACGACACCAGAGGAACTTTATCAGAGGAAGATTGAAAGTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CAA 72 bp GGTCATAAAAACTTCCCAGCGGGAGACACTGTAACGTaGTGCCAGAGAAATAGCAATGCTGTAGACGCTTTC +
Preference number: 6 (lower is better)
Translates to: GHKNFPAGDTVT*CQRNSNAVDAF
Trigger: GAAAGCGTCTACAGCATTGCTATTTCTCTGGCACAACGTTACAGTGTCTCCCGCTGGGAAGTTTTTATGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 90 bp CTTGTGGTAAGGCAAGAAGGTAAGCAAGAGCCAAGGTCATGTCATTaGGCAAGGCTTCACTTGCTAGTTGCAAGAGAACTTCAGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LVVRQEGKQEPRSCH*ARLHLLVARELQLL
Trigger: CAACAACTGAAGTTCTCTTGCAACTAGCAAGTGAAGCCTTGCCAAATGACATGACCTTGGCTCTTGCTTACCTTCTTGCCTTACCACAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp TGTGTAAAGCCACATATGGTACCGCACTGGATATACTaGATATGGGCGTTGGTACCTGCTTCACTTGGTTCA +
Preference number: 6 (lower is better)
Translates to: CVKPHMVPHWIY*IWALVPASLGS
Trigger: TGAACCAAGTGAAGCAGGTACCAACGCCCATATTCAGTATATCCAGTGCGGTACCATATGTGGCTTTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS GCA 72 bp TTCCAGTTGGTCTACCATGTCATGAAGCTTTGTGGTTaGCTCTGTCTTATCACCATATCCTCTTTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: FQLVYHVMKLCG*LCLITISSFWQ
Trigger: CTGCCAGAAAGAGGATATGGTGATAAGACAGAGGCAACCACAAAGCTTCATGACATGGTAGACCAACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000429842.1
ENST00000441755.5
ENST00000442506.5
CDS CCA 72 bp GTAGTTTTTAGTAATGGTTCGTGGGCGTTTCCGTGGTaGTGCAAATCGCTCCATTTCAGTCACCAAGTAAAG +
Preference number: 6 (lower is better)
Translates to: VVFSNGSWAFPW*CKSLHFSHQVK
Trigger: CTTTACTTGGTGACTGAAATGGAGCGATTTGCACCACCACGGAAACGCCCACGAACCATTACTAAAAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp CTTCGGGCAGCAAAACAGAATATTCATGTGGAGAAGTaGTCTCTGGAAAGTTGGACAGAATTGCAAGGCGAT +
Preference number: 6 (lower is better)
Translates to: LRAAKQNIHVEK*SLESWTELQGD
Trigger: ATCGCCTTGCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACATGAATATTCTGTTTTGCTGCCCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp TCAGGCTGTGCAGCATACAAGAATTCACTTTCATCTTaGAGATTCGGCTCAACAACCATTCTGCAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: SGCAAYKNSLSS*RFGSTTILQAN
Trigger: GTTGGCTTGCAGAATGGTTGTTGAGCCGAATCTCCAAGATGAAAGTGAATTCTTGTATGCTGCACAGCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp TCCAGTTCTCAGCAATACTTCTGCAAAGCTTTCCACTaGAACATGCTGATAGGTGTCATAGGTCCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: SSSQQYFCKAFH*NMLIGVIGPFR
Trigger: TCTGAAGGGACCTATGACACCTATCAGCATGTTCCAGTGGAAAGCTTTGCAGAAGTATTGCTGAGAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 72 bp AACCTTAAACTTCTTCAGCAGTCGAATGTGGGTTTCTaGTTTAATGGCACAGTTCCCCAAATCTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: NLKLLQQSNVGF*FNGTVPQICTA
Trigger: GGCTGTGCAGATTTGGGGAACTGTGCCATTAAACCAGAAACCCACATTCGACTGCTGAAGAAGTTTAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CCA 72 bp AAATGTAACTGCATCTACCACAGTGATGAGGTCACCTaGGTGGAGACGATCAAAGTACTTCATGCAGACATC +
Preference number: 6 (lower is better)
Translates to: KCNCIYHSDEVT*VETIKVLHADI
Trigger: GATGTCTGCATGAAGTACTTTGATCGTCTCCACCCAGGTGACCTCATCACTGTGGTAGATGCAGTTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 72 bp AATTGCTTTCGTGATGATAAAGGATGCACCATGTTTTaGGTTGCCTCTAGGCTGTACTTCAGTCTCCGGTGG +
Preference number: 6 (lower is better)
Translates to: NCFRDDKGCTMF*VASRLYFSLRW
Trigger: CCACCGGAGACTGAAGTACAGCCTAGAGGCAACCAAAAACATGGTGCATCCTTTATCATCACGAAAGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CAA 72 bp CTCAGGCTGTGCAGCATACAAGAATTCACTTTCATCTaGGAGATTCGGCTCAACAACCATTCTGCAAGCCAA +
Preference number: 6 (lower is better)
Translates to: LRLCSIQEFTFI*EIRLNNHSASQ
Trigger: TTGGCTTGCAGAATGGTTGTTGAGCCGAATCTCCAAGATGAAAGTGAATTCTTGTATGCTGCACAGCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CAA 72 bp AGATCCATGCAGCTATCAGTGAGGTTGGTAGAAGAATaGAAGTACTCTCTGCTGGCAGCCAAAACCAAGTCA +
Preference number: 6 (lower is better)
Translates to: RSMQLSVRLVEE*KYSLLAAKTKS
Trigger: TGACTTGGTTTTGGCTGCCAGCAGAGAGTACTTCAATTCTTCTACCAACCTCACTGATAGCTGCATGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000441755.5
ENST00000442506.5
CDS GCA 72 bp TCCTCGCACCAATCTTTAGCTCGGTGTTTATGTTCATaGCAAGGAATGATCATCAGGGAGTCACCGTTAAAA +
Preference number: 6 (lower is better)
Translates to: SSHQSLARCLCS*QGMIIRESPLK
Trigger: TTTTAACGGTGACTCCCTGATGATCATTCCTTGGCATGAACATAAACACCGAGCTAAAGATTGGTGCGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS GCA 72 bp TTGATAAAGAATTTCTGTCTGCAGAGAGCTGCTAGCTaGCAAAAGAAGTTCAATGCTGCTAGGAGGGCAATG +
Preference number: 6 (lower is better)
Translates to: LIKNFCLQRAAS*QKKFNAARRAM
Trigger: CATTGCCCTCCTAGCAGCATTGAACTTCTTTTGGCAGCTAGCAGCTCTCTGCAGACAGAAATTCTTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 72 bp AGAACAACTTCTGTAACCAGATGGTGTACAGAGAGCTaGGGGAAAGCATCTGTCCATCCTTTTCAGGGATTT +
Preference number: 6 (lower is better)
Translates to: RTTSVTRWCTES*GKASVHPFQGF
Trigger: AAATCCCTGAAAAGGATGGACAGATGCTTTCCCCAAGCTCTCTGTACACCATCTGGTTACAGAAGTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS CAA 72 bp GAAATTATTTTCATGATTGCACTCTGCACTATATCCTaGGGTGAGATGTCAAGAGGGCCAACTGCCACCTCT +
Preference number: 6 (lower is better)
Translates to: EIIFMIALCTIS*GEMSRGPTATS
Trigger: AGAGGTGGCAGTTGGCCCTCTTGACATCTCACCCAAGGATATAGTGCAGAGTGCAATCATGAAAATAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281513.10
ENST00000417461.5
ENST00000442506.5
CDS CAA 72 bp TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGTTTGTATaGATGAACGCAGCATACAACGCTCAGCATATAGTG +
Preference number: 6 (lower is better)
Translates to: CVCVCVREREFV*MNAAYNAQHIV
Trigger: CACTATATGCTGAGCGTTGTATGCTGCGTTCATCAATACAAACTCTCTCTCTCTCACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS CAA 90 bp TTTGTGTTTTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGTTTGTATaGATGAACGCAGCATACAACGCTCAGCATATAGTGGAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: FVFCVCVCVREREFV*MNAAYNAQHIVEAE
Trigger: TTCAGCCTCCACTATATGCTGAGCGTTGTATGCTGCGTTCATCAATACAAACTCTCTCTCTCTCACACACACACACACACAAAACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS TCA 72 bp TTCCATCCTGTTCTTGTCCCTGGCGACTGTAAAACTTaGCACTTAACATCCTTAATAATCCCAGTGTCTTCG +
Preference number: 6 (lower is better)
Translates to: FHPVLVPGDCKT*HLTSLIIPVSS
Trigger: CGAAGACACTGGGATTATTAAGGATGTTAAGTGTCAAGTTTTACAGTCGCCAGGGACAAGAACAGGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000427792.1
CDS CCA 72 bp AAAACAAGCTTCGGGCAGCAAAACAGAATATTCATGTaGAGAAGTGGTCTCTGGAAAGTTGGACAGAATTGC +
Preference number: 6 (lower is better)
Translates to: KTSFGQQNRIFM*RSGLWKVGQNC
Trigger: GCAATTCTGTCCAACTTTCCAGAGACCACTTCTCCACATGAATATTCTGTTTTGCTGCCCGAAGCTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CAA 72 bp TCTTCTTCTCCAGCTCTAGTCTCCAAACGAGATCGTTaGGGGGCAAGTTTAATCTCACACTCCAAACTTAAA +
Preference number: 6 (lower is better)
Translates to: SSSPALVSKRDR*GASLISHSKLK
Trigger: TTTAAGTTTGGAGTGTGAGATTAAACTTGCCCCCAAACGATCTCGTTTGGAGACTAGAGCTGGAGAAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CAA 72 bp CAAGAGCCAAGGTCATGTCATTTGGCAAGGCTTCACTaGCTAGTTGCAAGAGAACTTCAGTTGTTGGAAATA +
Preference number: 6 (lower is better)
Translates to: QEPRSCHLARLH*LVARELQLLEI
Trigger: TATTTCCAACAACTGAAGTTCTCTTGCAACTAGCAAGTGAAGCCTTGCCAAATGACATGACCTTGGCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5
CDS TCA 72 bp GAAGAGAACACTTTGGACCAAAAACCAGACGATGAATaGCTCCATTACACTAAAGCAAGGGTTGCTCTAAAG +
Preference number: 6 (lower is better)
Translates to: EENTLDQKPDDE*LHYTKARVALK
Trigger: CTTTAGAGCAACCCTTGCTTTAGTGTAATGGAGTCATTCATCGTCTGGTTTTTGGTCCAAAGTGTTCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS GCA 72 bp AAAGACAGAGTTGATCATTTCGTTCACAGGTATAGATaGACTCTAGTGCTATTGCCATCAGTTGGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: KDRVDHFVHRYR*TLVLLPSVGPD
Trigger: ATCAGGACCAACTGATGGCAATAGCACTAGAGTGCATCTATACCTGTGAACGAAATGATCAACTCTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281513.10
ENST00000429842.1
ENST00000441755.5
ENST00000442506.5
CDS GCA 72 bp AAGATTTGCAATCTGTTTTGCCCTGCTGAGCTGTGTTaGCATTTAGGTCCTGACTTTAGCTGTAACATAAAG +
Preference number: 6 (lower is better)
Translates to: KICNLFCPAELC*HLGPDFSCNIK
Trigger: CTTTATGTTACAGCTAAAGTCAGGACCTAAATGGCAACACAGCTCAGCAGGGCAAAACAGATTGCAAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485694.1
CDS CAA 72 bp CAATTGGAATCATTCACCTCTGCAGGCAGCATCTGCTaGGTGTTATACAAAGAGCGACACATTTTCAAAACT +
Preference number: 6 (lower is better)
Translates to: QLESFTSAGSIC*VLYKERHIFKT
Trigger: AGTTTTGAAAATGTGTCGCTCTTTGTATAACACCAAGCAGATGCTGCCTGCAGAGGTGAATGATTCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433283.5
CDS CCA 72 bp GCATCCACATTTTCAGGAACTCTTTCCAAACACTCATaGAGAACCCAGGATCGCTTCTTTATTTTACTCAAA +
Preference number: 6 (lower is better)
Translates to: ASTFSGTLSKHS*RTQDRFFILLK
Trigger: TTTGAGTAAAATAAAGAAGCGATCCTGGGTTCTCCATGAGTGTTTGGAAAGAGTTCCTGAAAATGTGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281513.10
CDS CCA 72 bp AATTGGAATCATTCACCTCTGCAGGCAGCATCTGCTTaGTGTTATACAAAGAGCGACACATTTTCAAAACTT +
Preference number: 6 (lower is better)
Translates to: NWNHSPLQAASA*CYTKSDTFSKL
Trigger: AAGTTTTGAAAATGTGTCGCTCTTTGTATAACACCAAGCAGATGCTGCCTGCAGAGGTGAATGATTCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433283.5
CDS CAA 90 bp GTTTCTCACAACGATGAAGAAAGGGAACCATCCACTGGTAGGCACTaGTCACATATTTATCCTCAGAACAACTATTCATCAGTAATCTTA +
Preference number: 6 (lower is better)
Translates to: VSHNDEEREPSTGRH*SHIYPQNNYSSVIL
Trigger: TAAGATTACTGATGAATAGTTGTTCTGAGGATAAATATGTGACAAGTGCCTACCAGTGGATGGTTCCCTTTCTTCATCGTTGTGAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000429842.1
CDS GCA 72 bp AGTTGTTGGAAATACTTCTCCTTTATTTTTAGCCTCTaGCAATTTTCCAGTTCTCAGCAATACTTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: SCWKYFSFIFSL*QFSSSQQYFCK
Trigger: TTTGCAGAAGTATTGCTGAGAACTGGAAAATTGGCAGAGGCTAAAAATAAAGGAGAAGTATTTCCAACAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281513.10
ENST00000442506.5