RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAXD (Homo sapiens)

Ensembl gene IDs: ENSG00000213995

Ensembl transcript IDs: ENST00000309957.3, ENST00000424185.7, ENST00000470164.2, ENST00000679389.1, ENST00000679968.1, ENST00000680254.1, ENST00000680312.1, ENST00000680505.1

Found 612 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGATGAGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTaGAGTCGGGACTCAGGGAGACACCCGGGGACCCCTGCCCAGCTC +
Preference number: 1 (lower is better)
Translates to: KMSWRTKQPSDGPSQ*SRDSGRHPGTPAQL
Trigger: GAGCTGGGCAGGGGTCCCCGGGTGTCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 90 bp AATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATaGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCA +
Preference number: 1 (lower is better)
Translates to: NARVRHETVPCPAKT*DQRTRQRQAAPGKP
Trigger: TGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 90 bp GTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAGTCGGGACTCAGGGAGACACCCGGG +
Preference number: 1 (lower is better)
Translates to: VTTLKEDELENEAAL*WTQSVQSGLRETPG
Trigger: CCCGGGTGTCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 90 bp GCGAACATCCCTAAGGACACGGCTGTGCTGCTTCCTAAGCATACGTaGCCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCATCACT +
Preference number: 1 (lower is better)
Translates to: ANIPKDTAVLLPKHT*PRYCLSPGLLSAIT
Trigger: AGTGATGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAGGGATGTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 90 bp ATAAGAGAACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATaGCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: IREHPNARVRHETVP*PAKTWDQRTRQRQA
Trigger: GGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTTCTCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 90 bp CAGTGTCTTTACTGGACGCGAACATCCCTAAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTC +
Preference number: 1 (lower is better)
Translates to: QCLYWTRTSLRTRLC*FLSIRDHDTVFPRV
Trigger: GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAGGGATGTTCGCGTCCAGTAAAGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 90 bp TACCAGTGTCTTTACTGGACGCGAACATCCCTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGG +
Preference number: 1 (lower is better)
Translates to: YQCLYWTRTSLRTRL*CFLSIRDHDTVFPR
Trigger: CCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 90 bp AGACAACAGAAGCTAACCCGAGGTCGACACTGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATC +
Preference number: 1 (lower is better)
Translates to: RQQKLTRGRHCHEEC*LKPQLPVSLLDANI
Trigger: GATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGTTAGCTTCTGTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 90 bp CCATCCACAAAGACAACAGAAGCTAACCCGAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGA +
Preference number: 1 (lower is better)
Translates to: PSTKTTEANPRSTLP*RVLAETAVTSVFTG
Trigger: TCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGTTAGCTTCTGTTGTCTTTGTGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 90 bp CACACACTCAAGGGTCAGCGTCACTCATGTTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACC +
Preference number: 1 (lower is better)
Translates to: HTLKGQRHSCFLLFP*CLQKGFQTKSSLIT
Trigger: GGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAAACATGAGTGACGCTGACCCTTGAGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 90 bp TTCCAGATTCTTAAATTCTCAATGGCAACCAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTC +
Preference number: 1 (lower is better)
Translates to: FQILKFSMATNLCSS*KSGKHRTPSAHAWV
Trigger: GACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATTTAAGAATCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 90 bp TGTTCCCATGGTGCCTCCAAAAGGGTTTCCAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCAATAAGCCAAACACCAGCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: CSHGASKRVSKQSHH*LPWSMSISQTPAAR
Trigger: TCTGGCTGCTGGTGTTTGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGGCACCATGGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: VRPQAAALHRARPRSGLPNEAAL*WTQSVQ
Trigger: CTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTT...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGACGGTCCGGTCTGCCCTaGTGGGGCCGGTGGGTATCA +
Preference number: 2 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGRSGLP*WGRWVS
Trigger: TGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: GHVRPQAAALHRARPRSGFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACACACCCGGGGACCCCTaGCCAGCTCCCTGCCGGAGG +
Preference number: 2 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNTPGDP*PAPCRR
Trigger: CCTCCGGCAGGGAGCTGGGCAGGGGTCCCCGGGTGT...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 2 (lower is better)
Translates to: QAAALHRARPRSGLPCWGNLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCATGCAGCCCTTCACCGTaGCCGTCCCCGGTCCGGTCT +
Preference number: 2 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPCSPSP*PSPVRS
Trigger: AGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCA...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGGAGGCCCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 2 (lower is better)
Translates to: YHGDPCVDTDTGERGTGGPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...GCCTCCTGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCGGACACCGGAGAGCGTaGGACAGGAGGCGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVGHRRA*DRRRLR
Trigger: TCTGAGACGCCTCCTGTCCCACGCTCTCCGGTGTCC...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCA +
Preference number: 2 (lower is better)
Translates to: GHVRPQAAALHRARPRSGKQSHH*LPWSMS
Trigger: TGACATACTCCAGGGTAATCAATGATGACTTTGTTT...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACAC +
Preference number: 2 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVGRWVS*GPLCRH
Trigger: GTGTCTACACAGGGGTCCCCATGATACCCACCGGCC...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACC +
Preference number: 2 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGRSTLP*RVLAET
Trigger: GGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCT...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACTGCAGCCCTTCACCGTaGCCGTCCCCGGTCCGGTCT +
Preference number: 2 (lower is better)
Translates to: HEECWLKPQLPVSLLDANCSPSP*PSPVRS
Trigger: AGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCA...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSVPVYF*SARAQV
Trigger: AACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCAC...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309957.3
3UTR-3UTR CCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCAGGACACCGGAGAGCGTaGGACAGGAGGCGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPGHRRA*DRRRLR
Trigger: TCTGAGACGCCTCCTGTCCCACGCTCTCCGGTGTCC...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACAC +
Preference number: 2 (lower is better)
Translates to: HGTREHVNVRPLQENHPQGRWVS*GPLCRH
Trigger: GTGTCTACACAGGGGTCCCCATGATACCCACCGGCC...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp ATCTCTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCCTCATGAACAGCATTaGGGCTGTCAGAGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: ISTQARSYDKSMQPGQPLPHEQH*GCQRSR
Trigger: CCGGCTTCTCTGACAGCCCCAATGCTGTTCATGAGG...AAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
3UTR-3UTR CCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACATTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACGGTCCGGTCTGCCCTaGTGGGGCCGGTGGGTATCA +
Preference number: 2 (lower is better)
Translates to: TRRVWPLLWKDATESIRERSGLP*WGRWVS
Trigger: TGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAAAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACC +
Preference number: 2 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQRSTLP*RVLAET
Trigger: GGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCT...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCACTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTCGGTCCGGTCTGCCCTaGTGGGGCCGGTGGGTATCA +
Preference number: 2 (lower is better)
Translates to: MSASQGITQESSSGQKDSRSGLP*WGRWVS
Trigger: TGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCACCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 2 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCACTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 2 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp AGGCCATCCGCGTCGATGACAACAGGGATGTCCCTGGCCTTTGACACTTCCAAATGCCCTGGACATTTCTaGGAAGCGCATCATCTCTAC +
Preference number: 2 (lower is better)
Translates to: RPSASMTTGMSLAFDTSKCPGHF*EAHHLY
Trigger: GTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCA...TTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTGTCATCGACGCGGATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
3UTR-3UTR GCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGGCACCAGGCCCAGCATaGCTCAAGTCCTCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: LWKDATESIREHPNARVRAPGPA*LKSSRA
Trigger: GGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGC...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGAC +
Preference number: 2 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNRTRLC*FLSIRD
Trigger: GTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCT...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATCTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGT +
Preference number: 2 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHLRTRL*CFLSIR
Trigger: ACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAG...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 2 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp TATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGGAGGCAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCA +
Preference number: 2 (lower is better)
Translates to: YHGDPCVDTDTGERGTGGKQSHH*LPWSMS
Trigger: TGACATACTCCAGGGTAATCAATGATGACTTTGTTT...GCCTCCTGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGACTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 2 (lower is better)
Translates to: ERRAPAERVTSRNFADLGLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCGGACACCGGAGAGCGTaGGACAGGAGGCGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: LLWKDATESIREHPNARVGHRRA*DRRRLR
Trigger: TCTGAGACGCCTCCTGTCCCACGCTCTCCGGTGTCC...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATTGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCA +
Preference number: 2 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHCHEEC*LKPQLP
Trigger: TGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCA...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 2 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSNLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCACTTCTGTTCCCATGGTaGCTCCAAAAGGGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPLLFPW*LQKGFQ
Trigger: TTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAG...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYALPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 2 (lower is better)
Translates to: TRRVWPLLWKDATESIREPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 2 (lower is better)
Translates to: HGTREHVNVRPLQENHPQNLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGCTTCTGTTCCCATGGTaGCTCCAAAAGGGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKLLFPW*LQKGFQ
Trigger: TTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAG...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTGCACCAGGCCCAGCATaGCTCAAGTCCTCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIAPGPA*LKSSRA
Trigger: GGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGC...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTCCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 2 (lower is better)
Translates to: MSASQGITQESSSGQKDSPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTGAAACTTCGCCGATCTaGGAGCAGGCCGAGAAACTC +
Preference number: 2 (lower is better)
Translates to: MSASQGITQESSSGQKDSETSPI*EQAEKL
Trigger: GAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTC...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACTGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 2 (lower is better)
Translates to: WKDATESIREHPNARVRHCPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGT +
Preference number: 2 (lower is better)
Translates to: LWKDATESIREHPNARVRLRTRL*CFLSIR
Trigger: ACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAG...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTTGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 2 (lower is better)
Translates to: MSASQGITQESSSGQKDSCPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CAA 90 bp CTGTTCCCATGGTGCCTCCAAAAGGGTTTCCAAACAAAGTCATCATaGATTACCCTGGAGTATGTCAATAAGCCAAACACCAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: LFPWCLQKGFQTKSS*ITLEYVNKPNTSSQ
Trigger: CTGGCTGCTGGTGTTTGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGGCACCATGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGATGAAGAGTGTTGGCTaGAACCGCAGTTACCAGTGT +
Preference number: 2 (lower is better)
Translates to: LWKDATESIREHPNARVRMKSVG*NRSYQC
Trigger: ACACTGGTAACTGCGGTTTCAGCCAACACTCTTCAT...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACCTTCTGTTCCCATGGTaGCTCCAAAAGGGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: WKDATESIREHPNARVRHLLFPW*LQKGFQ
Trigger: TTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAG...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTCTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGT +
Preference number: 2 (lower is better)
Translates to: MSASQGITQESSSGQKDSLRTRL*CFLSIR
Trigger: ACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAG...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 2 (lower is better)
Translates to: WKDATESIREHPNARVRHLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAAGAAACTTCGCCGATCTaGGAGCAGGCCGAGAAACTC +
Preference number: 2 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQETSPI*EQAEKL
Trigger: GAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTC...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGTACCAGTGTCTTTACTaGACGCGAACATCCCTAAGG +
Preference number: 2 (lower is better)
Translates to: LWKDATESIREHPNARVRYQCLY*TRTSLR
Trigger: CCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAATACCAGTGTCTTTACTaGACGCGAACATCCCTAAGG +
Preference number: 2 (lower is better)
Translates to: TRRVWPLLWKDATESIREYQCLY*TRTSLR
Trigger: CCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 2 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKNLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTATGAAGAGTGTTGGCTaGAACCGCAGTTACCAGTGT +
Preference number: 2 (lower is better)
Translates to: MSASQGITQESSSGQKDSMKSVG*NRSYQC
Trigger: ACACTGGTAACTGCGGTTTCAGCCAACACTCTTCAT...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR GCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGAC +
Preference number: 2 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIRTRLC*FLSIRD
Trigger: GTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCT...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 2 (lower is better)
Translates to: PSYYQGAKESSGILCLVSLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTTGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 2 (lower is better)
Translates to: FWKSSHVDSEASEVRRQICPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTAAAGTAGAATCCATCTaGGGCATGTCTGCATCACAG +
Preference number: 2 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIKVESI*GMSASQ
Trigger: CTGTGATGCAGACATGCCCCAGATGGATTCTACTTT...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR TCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTGTGGAAAGATGCTACTaGAAGTATAAGAGAACACCC +
Preference number: 2 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIVERCY*KYKRTP
Trigger: GGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCAC...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 72 bp CGGTCCGGTCTGCCCTGCTGGGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACACGGACACCGGAGAGCG +
Preference number: 3 (lower is better)
Translates to: RSGLPCWGRWVS*GPLCRHGHRRA
Trigger: CGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 72 bp TGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTaGAGTCGGGACTCAGGGAGACACCCGGGGACCCCT +
Preference number: 3 (lower is better)
Translates to: WRTKQPSDGPSQ*SRDSGRHPGTP
Trigger: AGGGGTCCCCGGGTGTCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 72 bp GTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATaGGACCAGAGAACACGTCAACGTCAGGCCGCTCCA +
Preference number: 3 (lower is better)
Translates to: VRHETVPCPAKT*DQRTRQRQAAP
Trigger: TGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 72 bp AAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCACACACACGCTCTCCC +
Preference number: 3 (lower is better)
Translates to: KSGKHRTPSAHA*VRIFPSHTRSP
Trigger: GGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 72 bp CACCCTAATGCACGCGTCAGGCACGAAACCGTACCATaGCCCGCTAAGACATGGGACCAGAGAACACGTCAA +
Preference number: 3 (lower is better)
Translates to: HPNARVRHETVP*PAKTWDQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 72 bp CCTAAGGACACGGCTGTGCTGCTTCCTAAGCATACGTaGCCACGATACTGTCTTTCCCCGGGTCTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: PKDTAVLLPKHT*PRYCLSPGLLS
Trigger: GCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGAAGTTCAGGAATACTTaGTTTAGTGTCGCCATAACA +
Preference number: 3 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGKFRNT*FSVAIT
Trigger: TGTTATGGCGACACTAAACAAAGTATTCCTGAACTT...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 72 bp TTAAAAGAAGATGAGCTGGAGAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAGTCGGGACTCAGGGAG +
Preference number: 3 (lower is better)
Translates to: LKEDELENEAAL*WTQSVQSGLRE
Trigger: CTCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCTCATCTTCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACACAAACAAAGTCATCATaGATTACCCTGGAGTATGTC +
Preference number: 3 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTQTKSS*ITLEYV
Trigger: GACATACTCCAGGGTAATCAATGATGACTTTGTTTG...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 72 bp CTTTACTGGACGCGAACATCCCTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGTGACCACGATACTGTC +
Preference number: 3 (lower is better)
Translates to: LYWTRTSLRTRL*CFLSIRDHDTV
Trigger: GACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAGGGATGTTCGCGTCCAGTAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 72 bp AAGACAACAGAAGCTAACCCGAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTC +
Preference number: 3 (lower is better)
Translates to: KTTEANPRSTLP*RVLAETAVTSV
Trigger: GACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGTTAGCTTCTGTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 72 bp TACTGGACGCGAACATCCCTAAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGACCACGATACTGTCTTT +
Preference number: 3 (lower is better)
Translates to: YWTRTSLRTRLC*FLSIRDHDTVF
Trigger: AAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAGGGATGTTCGCGTCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR GCA 72 bp CCACAAAGACAACAGAAGCTAACCCGAGGTCGACACTaGCATGAAGAGTGTTGGCTGAAACCGCAGTTACCA +
Preference number: 3 (lower is better)
Translates to: PQRQQKLTRGRH*HEECWLKPQLP
Trigger: TGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGTTAGCTTCTGTTGTCTTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 72 bp AAGCTAACCCGAGGTCGACACTGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCAGTGTCTTTACTGGAC +
Preference number: 3 (lower is better)
Translates to: KLTRGRHCHEEC*LKPQLPVSLLD
Trigger: GTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGACAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 3 (lower is better)
Translates to: ERRAPAERVTSRNFADLGQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CCA 72 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTCAGCACACGCGTGGGT +
Preference number: 3 (lower is better)
Translates to: LNGNQFMLKLKI*QAPYAFSTRVG
Trigger: ACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGCAAACAAAGTCATCATaGATTACCCTGGAGTATGTC +
Preference number: 3 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVQTKSS*ITLEYV
Trigger: GACATACTCCAGGGTAATCAATGATGACTTTGTTTG...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTAGGAGGGTTTGGCCCTaGCTGTGGAAAGATGCTACT +
Preference number: 3 (lower is better)
Translates to: MSASQGITQESSSGQKDSRRVWP*LWKDAT
Trigger: AGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCT...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAACAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 3 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGCAAACAAAGTCATCATaGATTACCCTGGAGTATGTC +
Preference number: 3 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKQTKSS*ITLEYV
Trigger: GACATACTCCAGGGTAATCAATGATGACTTTGTTTG...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACCAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 3 (lower is better)
Translates to: WKDATESIREHPNARVRHQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 3 (lower is better)
Translates to: LWKDATESIREHPNARVRQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCCAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 3 (lower is better)
Translates to: LLWKDATESIREHPNARVQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 72 bp CTTAAATTCTCAATGGCAACCAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGTACGCCTTCAGCACAC +
Preference number: 3 (lower is better)
Translates to: LKFSMATNLCSS*KSGKHRTPSAH
Trigger: GTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR TCA 72 bp GGTGCCTCCAAAAGGGTTTCCAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCAATAAGCCAAACACCA +
Preference number: 3 (lower is better)
Translates to: GASKRVSKQSHH*LPWSMSISQTP
Trigger: TGGTGTTTGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR-3UTR CAA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAAGTTCAGGAATACTTaGTTTAGTGTCGCCATAACA +
Preference number: 3 (lower is better)
Translates to: LLWKDATESIREHPNARVKFRNT*FSVAIT
Trigger: TGTTATGGCGACACTAAACAAAGTATTCCTGAACTT...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCGGTGGGTGCGGCCGAGAGCAATaGGACAACGACCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: QPFTVPVPGPVCPAGAGGCGREQ*DNDRAG
Trigger: GCCGGCGCGGTCGTTGTCGCATTGCTCTCGGCCGCA...CCCACCGGCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR CCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCCCACCAGGAGAGGGCTaGACCTGCGGAGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPPPGEG*TCGEGD
Trigger: GTCCCCCTCTCCGCAGGTCCAGCCCTCTCCTGGTGG...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR CCA 90 bp CAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCGGTGGGCGATCATGTCGGAGGTaGTGGTGGAGCGACCGTGCT +
Preference number: 4 (lower is better)
Translates to: QPFTVPVPGPVCPAGAGGRSCRR*WWSDRA
Trigger: AGCACGGTCGCTCCACCACCACCTCCGACATGATCG...CCCACCGGCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCGGTGGGGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: QPFTVPVPGPVCPAGAGGGRWVS*GPLCRH
Trigger: GTGTCTACACAGGGGTCCCCATGATACCCACCGGCC...CCCACCGGCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCGGCTGCTGCCTTCCTaGCTGCACACAAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GHVRPQAAALHRARPRSGRLLPS*LHTSTC
Trigger: GCAGGTGCTTGTGTGCAGCCAGGAAGGCAGCAGCCG...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGGAGGTGTGGGGAAGTaGGCGTCGTGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ETALGATSDPRLQPFTVPGGVGK*ASWSGG
Trigger: GCCCCCGGACCACGACGCCCACTTCCCCACACCTCC...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR TCA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCGCTCCAGTGTACTCCTaGCAGCCTCCAACTACGCCT +
Preference number: 4 (lower is better)
Translates to: QAAALHRARPRSGLPCWGAPVYS*QPPTTP
Trigger: AGGCGTAGTTGGAGGCTGTCAGGAGTACACTGGAGC...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: QAAALHRARPRSGLPCWGNEAAL*WTQSVQ
Trigger: CTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTT...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTGTGGTGGAGCGACCGTaGTTCTGGAAGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GHVRPQAAALHRARPRSGVVERP*FWKAWW
Trigger: CCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCAC...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCTGCAGCCCTTCACCGTaGCCGTCCCCGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: ETALGATSDPRLQPFTVPCSPSP*PSPVRS
Trigger: AGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCA...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGTTCCGGATTCCCAGCTaGCCCCGCGCCGTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGFRIPS*PRAVAG
Trigger: TCCGGCGACGGCGCGGGGGCAGCTGGGAATCCGGAA...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424185.7
ENST00000680254.1
CDS-3UTR CCA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCACACAAGCACCTGCTaGCCGTTGGAGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: QAAALHRARPRSGLPCWGHTSTC*PLERMS
Trigger: CGACATCCTCTCCAACGGCCAGCAGGTGCTTGTGTG...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCGATCATGTCGGAGGTaGTGGTGGAGCGACCGTGCT +
Preference number: 4 (lower is better)
Translates to: GHVRPQAAALHRARPRSGRSCRR*WWSDRA
Trigger: AGCACGGTCGCTCCACCACCACCTCCGACATGATCG...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPGRWVS*GPLCRH
Trigger: GTGTCTACACAGGGGTCCCCATGATACCCACCGGCC...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GAGCACAGCCTTCCGGTAGCCATGGATGAGGGCCGGCTGCTGAGCGACCAGCCAATGAGGGCCGGCTGCTaGGCGACCAGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: EHSLPVAMDEGRLLSDQPMRAGC*ATSHRP
Trigger: TGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCAT...TGGCTGGTCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR GCA 90 bp CAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCGGTGGGAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGAC +
Preference number: 4 (lower is better)
Translates to: QPFTVPVPGPVCPAGAGGRTRLC*FLSIRD
Trigger: GTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCT...CCCACCGGCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCACGAAACCGTACCATaGCCCGCTAAGACATGGGAC +
Preference number: 4 (lower is better)
Translates to: QAAALHRARPRSGLPCWGHETVP*PAKTWD
Trigger: GTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTG...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGTCAAGAACTGGGTaGACGATCAGCTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GHVRPQAAALHRARPRSGLSRTG*TISSGL
Trigger: CAGCCCGGAGCTGATCGTCCACCCAGTTCTTGACAG...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCGAGCGACCGTGCTTCTaGAAGGCTTGGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPERPCF*KAWWLH
Trigger: GTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTC...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTTCATGTCGGAGGTGGTaGTGGAGCGACCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GHVRPQAAALHRARPRSGSCRRW*WSDRAS
Trigger: AGAAGCACGGTCGCTCCACCACCACCTCCGACATGA...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTACACCCGGGGACCCCTaGCCAGCTCCCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRTPGDP*PAPCRR
Trigger: CCTCCGGCAGGGAGCTGGGCAGGGGTCCCCGGGTGT...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAACACCCGGGGACCCCTaGCCAGCTCCCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGTPGDP*PAPCRR
Trigger: CCTCCGGCAGGGAGCTGGGCAGGGGTCCCCGGGTGT...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTACACCCGGGGACCCCTaGCCAGCTCCCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACTPGDP*PAPCRR
Trigger: CCTCCGGCAGGGAGCTGGGCAGGGGTCCCCGGGTGT...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGCACCAGGCCCAGCATaGCTCAAGTCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ETALGATSDPRLQPFTVPAPGPA*LKSSRA
Trigger: GGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGC...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCCAGGTGCGGCCGCACTaGCACAGAACACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: ETALGATSDPRLQPFTVPQVRPH*HRTRGT
Trigger: TGTCCCACGTGTTCTGTGCCAGTGCGGCCGCACCTG...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPVPVYF*SARAQV
Trigger: AACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCAC...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCCCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGGTCTGCACACCCGGGGACCCCTaGCCAGCTCCCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PITHTLSPVQGACLLLVCTPGDP*PAPCRR
Trigger: CCTCCGGCAGGGAGCTGGGCAGGGGTCCCCGGGTGT...GCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTGGAGGGTTTGGCCCTTaGTGTGGAAAGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: GHVRPQAAALHRARPRSGGGFGP*CGKMLL
Trigger: CAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCC...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CACGTGGTTGGGAGTGAGCACAGCCTTCCGGTAGCCATGGATGAGGGCCGGCTGCCACGTGGTTGGGAGTaGGCACAGCCTTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: HVVGSEHSLPVAMDEGRLPRGWE*AQPSGS
Trigger: GCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGG...CAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTGCTCACTCCCAACCACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR GCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACACCCGTACAGCGCGAGTaGGGCCGAGAGCAATGCGAC +
Preference number: 4 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTPVQRE*GREQCD
Trigger: GTCGCATTGCTCTCGGCCGCACTCGCGCTGTACGGG...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR GCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGCCTACGACAAGAGCATaGAGCCGGGGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGPTTRA*SRGSHF
Trigger: GAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCGGTCCGGTCTGCCCTaGTGGGGCCGGTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRRSGLP*WGRWVS
Trigger: TGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCCATCTGGGGCATGTCTaGATCACAGGGTATCACTCA +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPHLGHV*ITGYHS
Trigger: TGAGTGATACCCTGTGATGCAGACATGCCCCAGATG...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCGGTGGGAAAGTAGAATCCATCTaGGGCATGTCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: QPFTVPVPGPVCPAGAGGKVESI*GMSASQ
Trigger: CTGTGATGCAGACATGCCCCAGATGGATTCTACTTT...CCCACCGGCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAATGAGGGCCGGCTGCTaGGCGACCAGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSMRAGC*ATSHRP
Trigger: TGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCAT...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGGTCTGCATGAGGGCCGGCTGCTaGGCGACCAGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PITHTLSPVQGACLLLVCMRAGC*ATSHRP
Trigger: TGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCAT...GCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTTCCGGTAGCCATGGATaGGGGCCGGCTGCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGSGSHG*GPAAER
Trigger: TCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGA...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GGTCTCCTTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGATCCGGTAGCCATGGATaGGGGCCGGCTGCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: GLLSAITAPGPACLKSSRSGSHG*GPAAER
Trigger: TCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGA...TCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAAGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCATGAAGAGTGTTGGCTaGAACCGCAGTTACCAGTGT +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPMKSVG*NRSYQC
Trigger: ACACTGGTAACTGCGGTTTCAGCCAACACTCTTCAT...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCCTTCTGTTCCCATGGTaGCTCCAAAAGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPLLFPW*LQKGFQ
Trigger: TTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAG...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTGCAGCCCTTCACCGTaGCCGTCCCCGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVCSPSP*PSPVRS
Trigger: AGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCA...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCTCCTCTGCAAGCCCGGATTaGCCCACAGCGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LPKPGPTTRACSRGSHFSSASPD*PTARTQ
Trigger: CTGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGA...GGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp ATGGATGAGGGCCGGCTGCTGAGCGACCAGCCACAGGCCATCCGCGTCGATGACCTGCTGAACTCCACGTaGTTGGGAGTGAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: MDEGRLLSDQPQAIRVDDLLNST*LGVSTA
Trigger: GGCTGTGCTCACTCCCAACCACGTGGAGTTCAGCAG...GTCATCGACGCGGATGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGGAGCGACCGTGCTTCTaGAAGGCTTGGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGERPCF*KAWWLH
Trigger: GTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTC...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTACCAGTGTCTTTACTaGACGCGAACATCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: VRPQAAALHRARPRSGLPYQCLY*TRTSLR
Trigger: CCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTCGGCCCCCGCGCGTGTaGCCATCCCCGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSRPPRV*PSPGQM
Trigger: CATTTGGCCCGGGGATGGTCACACGCGCGGGGGCCG...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR TCA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGGCCATCCGCGTCGATaGCAACAGGGATGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGGHPRR*QQGCPW
Trigger: CCAGGGACATCCCTGTTGTCATCGACGCGGATGGCC...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTTCCGGTAGCCATGGATaGGGGCCGGCTGCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSSGSHG*GPAAER
Trigger: TCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGA...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCACTTCTCCACCTCATGAACAGCATTGGGGCTGTCAGAGAAGCCGGCGCAGAGTCCGGTAGCCATGGATaGGGGCCGGCTGCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: PLLHLMNSIGAVREAGAESGSHG*GPAAER
Trigger: TCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGA...CTCTGCGCCGGCTTCTCTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTCCACGTGGTTGGGAGTaGGCACAGCCTTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGPRGWE*AQPSGS
Trigger: GCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGG...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGCGTCATACAGTCTGCTaGACTCCACGTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGRHTVC*TPRGWE
Trigger: CTCCCAACCACGTGGAGTTCAGCAGACTGTATGACG...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ATGAGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACCCCGTACAGCGCGAGTaGGGCCGAGAGCAATGCGAC +
Preference number: 4 (lower is better)
Translates to: MSWRTKQPSDGPSQCSRDPVQRE*GREQCD
Trigger: GTCGCATTGCTCTCGGCCGCACTCGCGCTGTACGGG...GTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR GCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GGTCTCCTTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCACCAGGCCCAGCATaGCTCAAGTCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLLSAITAPGPACLKSSRAPGPA*LKSSRA
Trigger: GGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGC...TCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAAGGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGAC +
Preference number: 4 (lower is better)
Translates to: ETALGATSDPRLQPFTVPRTRLC*FLSIRD
Trigger: GTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCT...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATTTCCGGATTCCCAGCTaGCCCCGCGCCGTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHFRIPS*PRAVAG
Trigger: TCCGGCGACGGCGCGGGGGCAGCTGGGAATCCGGAA...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424185.7
ENST00000680254.1
CDS-3UTR CCA 90 bp CACGTGGTTGGGAGTGAGCACAGCCTTCCGGTAGCCATGGATGAGGGCCGGCTGCTGGCACAGAACACGTaGGACAAGTCTGCGCCCACT +
Preference number: 4 (lower is better)
Translates to: HVVGSEHSLPVAMDEGRLLAQNT*DKSAPT
Trigger: AGTGGGCGCAGACTTGTCCCACGTGTTCTGTGCCAG...CAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTGCTCACTCCCAACCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCGGCTGCTGCCTTCCTaGCTGCACACAAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRRLLPS*LHTSTC
Trigger: GCAGGTGCTTGTGTGCAGCCAGGAAGGCAGCAGCCG...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGGGACGGCTGCTGCCTTCCTaGCTGCACACAAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GERSSPLMDPVSAVGTQGRLLPS*LHTSTC
Trigger: GCAGGTGCTTGTGTGCAGCCAGGAAGGCAGCAGCCG...TCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAGGGAAGTGGGCGTCGTaGTCCGGGGGCCGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: HGTREHVNVRPLQENHPQGKWAS*SGGRSY
Trigger: GTAGCTGCGGCCCCCGGACCACGACGCCCACTTCCC...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR CCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGGAAACTTCGCCGATCTaGGAGCAGGCCGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGETSPI*EQAEKL
Trigger: GAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTC...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGGAGGCGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: YHGDPCVDTDTGERGTGGGRWVS*GPLCRH
Trigger: GTGTCTACACAGGGGTCCCCATGATACCCACCGGCC...GCCTCCTGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCTCCGCTCCAGTGTACTCCTaGCAGCCTCCAACTACGCCT +
Preference number: 4 (lower is better)
Translates to: LPKPGPTTRACSRGSHFSAPVYS*QPPTTP
Trigger: AGGCGTAGTTGGAGGCTGTCAGGAGTACACTGGAGC...GGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR GCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAATGCGGCCGAGAGCAATaGGACAACGACCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQCGREQ*DNDRAG
Trigger: GCCGGCGCGGTCGTTGTCGCATTGCTCTCGGCCGCA...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR GCA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGACCTACGACAAGAGCATaGAGCCGGGGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGPTTRA*SRGSHF
Trigger: GAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCGACAGGAGGTCCCCTTaGCCTCCACACCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVDRRSP*PPHLRL
Trigger: CAGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTC...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGATGGACCCAGTCAGTaGAGTCGGGACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTDGPSQ*SRDSGR
Trigger: TCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATC...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCCGGTCCGGTCTGCCCTaGTGGGGCCGGTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFRSGLP*WGRWVS
Trigger: TGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATTGCAGCCCTTCACCGTaGCCGTCCCCGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHCSPSP*PSPVRS
Trigger: AGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCA...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTGCACCAGGCCCAGCATaGCTCAAGTCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSAPGPA*LKSSRA
Trigger: GGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGC...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCACAGGTGCGGCCGCACTaGCACAGAACACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSQVRPH*HRTRGT
Trigger: TGTCCCACGTGTTCTGTGCCAGTGCGGCCGCACCTG...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGGAGGCCACACAAGCACCTGCTaGCCGTTGGAGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: YHGDPCVDTDTGERGTGGHTSTC*PLERMS
Trigger: CGACATCCTCTCCAACGGCCAGCAGGTGCTTGTGTG...GCCTCCTGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTCGGCTGCTGCCTTCCTaGCTGCACACAAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVRLLPS*LHTSTC
Trigger: GCAGGTGCTTGTGTGCAGCCAGGAAGGCAGCAGCCG...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGATGTCGGAGGTGGTGGTaGAGCGACCGTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGCRRWW*SDRASG
Trigger: TCCAGAAGCACGGTCGCTCCACCACCACCTCCGACA...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGGGACGATCATGTCGGAGGTaGTGGTGGAGCGACCGTGCT +
Preference number: 4 (lower is better)
Translates to: GERSSPLMDPVSAVGTQGRSCRR*WWSDRA
Trigger: AGCACGGTCGCTCCACCACCACCTCCGACATGATCG...TCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGGRWVS*GPLCRH
Trigger: GTGTCTACACAGGGGTCCCCATGATACCCACCGGCC...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAACGGCCCCCGCGCGTGTaGCCATCCCCGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKRPPRV*PSPGQM
Trigger: CATTTGGCCCGGGGATGGTCACACGCGCGGGGGCCG...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR TCA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCTCCAGTGTACTCCTaGCAGCCTCCAACTACGCCT +
Preference number: 4 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGAPVYS*QPPTTP
Trigger: AGGCGTAGTTGGAGGCTGTCAGGAGTACACTGGAGC...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGTGCCCTGGACATTTCTaGGAAGCGCATCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGCPGHF*EAHHLY
Trigger: GTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCA...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GAGAAGCGCATCATCTCTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGCCATCCGCGTCGATaGCAACAGGGATGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EKRIISTQARSYDKSMQPGHPRR*QQGCPW
Trigger: CCAGGGACATCCCTGTTGTCATCGACGCGGATGGCC...CGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGATGATGCGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAGGTTGCACTGCCTGGTaGGAGAGCAGGCGCCAAACG +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGGCTAW*ESRRQT
Trigger: CGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACC...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GGTCTCCTTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLLSAITAPGPACLKSSRNEAAL*WTQSVQ
Trigger: CTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTT...TCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAAGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GCAGCCACTTCTCCACCTCATGAACAGCATTGGGGCTGTCAGAGAAGCCGGCGCGGCCTTAATCACAGGTaGGGCCGCACTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: AATSPPHEQHWGCQRSRRGLNHR*GRTGTE
Trigger: TTCTGTGCCAGTGCGGCCGCACCTGTGATTAAGGCC...GCGCCGGCTTCTCTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR GCA 90 bp CTTCTCCACCTCATGAACAGCATTGGGGCTGTCAGAGAAGCCGGCGCAGAGCGACCTACGACAAGAGCATaGAGCCGGGGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: LLHLMNSIGAVREAGAERPTTRA*SRGSHF
Trigger: GAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG...TCGCTCTGCGCCGGCTTCTCTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR GCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGACAGGAGGTCCCCTTaGCCTCCACACCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGDRRSP*PPHLRL
Trigger: CAGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTC...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTGATGGACCCAGTCAGTaGAGTCGGGACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACDGPSQ*SRDSGR
Trigger: TCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATC...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGCATCTGGGGCATGTCTaGATCACAGGGTATCACTCA +
Preference number: 4 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGHLGHV*ITGYHS
Trigger: TGAGTGATACCCTGTGATGCAGACATGCCCCAGATG...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TCTGCTGAACTCCACGTGGTTGGGAGTGAGCACAGCCTTCCGGTAGCCATGGATCAGGTGCGGCCGCACTaGCACAGAACACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SAELHVVGSEHSLPVAMDQVRPH*HRTRGT
Trigger: TGTCCCACGTGTTCTGTGCCAGTGCGGCCGCACCTG...ATCCATGGCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCCAACAGGGATGTCCCTaGCCTTTGACACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ETALGATSDPRLQPFTVPQQGCP*PLTLPK
Trigger: TTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTG...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCACACAAGCACCTGCTaGCCGTTGGAGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRHTSTC*PLERMS
Trigger: CGACATCCTCTCCAACGGCCAGCAGGTGCTTGTGTG...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACATGCTTCTGGAAGGCTTaGTGGTTGCACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTCFWKA*WLHCLV
Trigger: CACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCA...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCATGTCGGAGGTGGTGGTaGAGCGACCGTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSCRRWW*SDRASG
Trigger: TCCAGAAGCACGGTCGCTCCACCACCACCTCCGACA...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CACAGCCTTCCGGTAGCCATGGATGAGGGCCGGCTGCTGAGCGACCAGCCACAGGCCCACTTTGAGAGCTaGGATTGCTGCAAAATATGG +
Preference number: 4 (lower is better)
Translates to: HSLPVAMDEGRLLSDQPQAHFES*DCCKIW
Trigger: CCATATTTTGCAGCAATCTCAGCTCTCAAAGTGGGC...CTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATGGCCATCCGCGTCGATaGCAACAGGGATGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADGHPRR*QQGCPW
Trigger: CCAGGGACATCCCTGTTGTCATCGACGCGGATGGCC...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTATGAGGGCCGGCTGCTaGGCGACCAGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETMRAGC*ATSHRP
Trigger: TGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCAT...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCCACGTGGTTGGGAGTaGGCACAGCCTTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADPRGWE*AQPSGS
Trigger: GCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGG...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAACCACGTGGTTGGGAGTaGGCACAGCCTTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: HGTREHVNVRPLQENHPQPRGWE*AQPSGS
Trigger: GCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGG...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCGTCATACAGTCTGCTaGACTCCACGTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRRHTVC*TPRGWE
Trigger: CTCCCAACCACGTGGAGTTCAGCAGACTGTATGACG...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTCGTCATACAGTCTGCTaGACTCCACGTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACRHTVC*TPRGWE
Trigger: CTCCCAACCACGTGGAGTTCAGCAGACTGTATGACG...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSNEAAL*WTQSVQ
Trigger: CTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTT...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAGTGGTGGAGCGACCGTaGTTCTGGAAGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGVVERP*FWKAWW
Trigger: CCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCAC...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ATGAGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACGATGGACCCAGTCAGTaGAGTCGGGACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: MSWRTKQPSDGPSQCSRDDGPSQ*SRDSGR
Trigger: TCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATC...GTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CACAGCCTTCCGGTAGCCATGGATGAGGGCCGGCTGCTGAGCGACCAGCCACAGGATTGCTGCAAAATATaGGGCTCCAGTGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: HSLPVAMDEGRLLSDQPQDCCKI*GSSVLL
Trigger: CAGGAGTACACTGGAGCCCCATATTTTGCAGCAATC...CTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTCTGCTGAACTCCACGTaGTTGGGAGTGAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVLLNST*LGVSTA
Trigger: GGCTGTGCTCACTCCCAACCACGTGGAGTTCAGCAG...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAGCACCTGCTGGCCGTTaGAGAGGATGTCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: HGTREHVNVRPLQENHPQAPAGR*RGCRAL
Trigger: GAGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGC...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATGCACCTGCTGGCCGTTaGAGAGGATGTCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADAPAGR*RGCRAL
Trigger: GAGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGC...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCACACACAAGCACCTGCTaGCCGTTGGAGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSHTSTC*PLERMS
Trigger: CGACATCCTCTCCAACGGCCAGCAGGTGCTTGTGTG...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGGGAGAAACTTCGCCGATCTaGGAGCAGGCCGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: GERSSPLMDPVSAVGTQGETSPI*EQAEKL
Trigger: GAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTC...TCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGGACACCGGAGAGCGTaGGACAGGAGGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQGHRRA*DRRRLR
Trigger: TCTGAGACGCCTCCTGTCCCACGCTCTCCGGTGTCC...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAGGCCGGTGGGTATCATaGGGACCCCTGTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGGRWVS*GPLCRH
Trigger: GTGTCTACACAGGGGTCCCCATGATACCCACCGGCC...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTATGGCACAGTTTTTCTaGAAAAGTTCACATGTAGAC +
Preference number: 4 (lower is better)
Translates to: GHVRPQAAALHRARPRSGMAQFF*KSSHVD
Trigger: GTCTACATGTGAACTTTTCCAGAAAAACTGTGCCAT...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GCTGAACTCCACGTGGTTGGGAGTGAGCACAGCCTTCCGGTAGCCATGGATGAGAGCGACTCACAGAACTaGGTGGACGATCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: AELHVVGSEHSLPVAMDESDSQN*VDDQLR
Trigger: CCGGAGCTGATCGTCCACCCAGTTCTGTGAGTCGCT...CTCATCCATGGCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTAGTCTGCGCCCACTTTaGGAGCTGAGATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACSLRPL*ELRLLQ
Trigger: TTGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACT...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GCAGCCACTTCTCCACCTCATGAACAGCATTGGGGCTGTCAGAGAAGCCGGCGCGATGTCCCTGGCCTTTaGCACTTCCAAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: AATSPPHEQHWGCQRSRRDVPGL*HFQNAL
Trigger: CAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATC...GCGCCGGCTTCTCTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAGTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGATGAGGGCCGGCTGCTaGGCGACCAGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKMRAGC*ATSHRP
Trigger: TGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCAT...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTTTCAAAGAGCTTGCTaGAGGCGGCCCCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVFQRAC*RRPPPR
Trigger: CCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAA...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTTTCAAAGAGCTTGCTaGAGGCGGCCCCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFFQRAC*RRPPPR
Trigger: CCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAA...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCCTACGACAAGAGCATaGAGCCGGGGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADPTTRA*SRGSHF
Trigger: GAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATCGGTCCGGTCTGCCCTaGTGGGGCCGGTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNRSGLP*WGRWVS
Trigger: TGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGTGCAGCCCTTCACCGTaGCCGTCCCCGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKCSPSP*PSPVRS
Trigger: AGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCA...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACACTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGT +
Preference number: 4 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTLRTRL*CFLSIR
Trigger: ACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAG...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCACACGAAACCGTACCATaGCCCGCTAAGACATGGGAC +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSHETVP*PAKTWD
Trigger: GTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTG...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTGGAGGGTTTGGCCCTTaGTGTGGAAAGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACGGFGP*CGKMLL
Trigger: CAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCC...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCCTGGCACAGAACACGTaGGACAAGTCTGCGCCCACT +
Preference number: 4 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVLAQNT*DKSAPT
Trigger: AGTGGGCGCAGACTTGTCCCACGTGTTCTGTGCCAG...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGACTGTCAAGAACTGGGTaGACGATCAGCTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGLSRTG*TISSGL
Trigger: CAGCCCGGAGCTGATCGTCCACCCAGTTCTTGACAG...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCGGGGCTGTCAAGAACTaGGTGGACGATCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFGAVKN*VDDQLR
Trigger: CCGGAGCTGATCGTCCACCCAGTTCTTGACAGCCCC...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAGAGCGACCGTGCTTCTaGAAGGCTTGGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGERPCF*KAWWLH
Trigger: GTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTC...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATTGTCGGAGGTGGTGGTaGAGCGACCGTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADCRRWW*SDRASG
Trigger: TCCAGAAGCACGGTCGCTCCACCACCACCTCCGACA...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTGTCGGAGGTGGTGGTaGAGCGACCGTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVCRRWW*SDRASG
Trigger: TCCAGAAGCACGGTCGCTCCACCACCACCTCCGACA...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACCPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GCTGAACTCCACGTGGTTGGGAGTGAGCACAGCCTTCCGGTAGCCATGGATGAGAGTCTGCGCCCACTTTaGGAGCTGAGATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: AELHVVGSEHSLPVAMDESLRPL*ELRLLQ
Trigger: TTGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACT...CTCATCCATGGCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGATGCCCTGGACATTTCTaGGAAGCGCATCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGCPGHF*EAHHLY
Trigger: GTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCA...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGTCCGGTAGCCATGGATaGGGGCCGGCTGCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKSGSHG*GPAAER
Trigger: TCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGA...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: ETALGATSDPRLQPFTVPNLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHNEAAL*WTQSVQ
Trigger: CTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTT...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGGGAAGGCCAAAAAGACTCTaGAGGGAACCAGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GERSSPLMDPVSAVGTQGRPKRL*REPGGF
Trigger: AAACCCTCCTGGTTCCCTTCAGAGTCTTTTTGGCCT...TCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGGCCTTAATCACAGGTaGGGCCGCACTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGGLNHR*GRTGTE
Trigger: TTCTGTGCCAGTGCGGCCGCACCTGTGATTAAGGCC...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCAGTGGTGGAGCGACCGTaGTTCTGGAAGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPVVERP*FWKAWW
Trigger: CCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCAC...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGT +
Preference number: 4 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRLRTRL*CFLSIR
Trigger: ACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAG...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAACCCGAGGTCGACACTaGCATGAAGAGTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGTRGRH*HEECWL
Trigger: CAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCCACGAAACCGTACCATaGCCCGCTAAGACATGGGAC +
Preference number: 4 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVHETVP*PAKTWD
Trigger: GTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTG...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TCTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCTCTTTCTAAAACTCGTCTaGAAGCCCGGATTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: STQARSYDKSMQPGQPLLFLKLV*KPGLPH
Trigger: GTGGGGCAATCCGGGCTTGCAGACGAGTTTTAGAAA...GAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGACTGGCACAGAACACGTaGGACAAGTCTGCGCCCACT +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGLAQNT*DKSAPT
Trigger: AGTGGGCGCAGACTTGTCCCACGTGTTCTGTGCCAG...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAACTGGCACAGAACACGTaGGACAAGTCTGCGCCCACT +
Preference number: 4 (lower is better)
Translates to: HGTREHVNVRPLQENHPQLAQNT*DKSAPT
Trigger: AGTGGGCGCAGACTTGTCCCACGTGTTCTGTGCCAG...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGTCTCCTTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGACCTCATGAACAGCATTaGGGCTGTCAAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: GLLSAITAPGPACLKSSRPHEQH*GCQELG
Trigger: ACCCAGTTCTTGACAGCCCCAATGCTGTTCATGAGG...TCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAAGGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGACTGCTGAACTCCACGTaGTTGGGAGTGAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGLLNST*LGVSTA
Trigger: GGCTGTGCTCACTCCCAACCACGTGGAGTTCAGCAG...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACTGCTGAACTCCACGTaGTTGGGAGTGAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQLLNST*LGVSTA
Trigger: GGCTGTGCTCACTCCCAACCACGTGGAGTTCAGCAG...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACACTTAGCACAGATCCATaGCTGTCATCGCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTLSTDP*LSSLSI
Trigger: TATGGACAGCGATGACAGCCATGGATCTGTGCTAAG...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACACACAAGCACCTGCTaGCCGTTGGAGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQHTSTC*PLERMS
Trigger: CGACATCCTCTCCAACGGCCAGCAGGTGCTTGTGTG...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTCCCATTTGTTTTCTGTaGTCCAGCAAGGAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVPICFL*SSKERP
Trigger: TGGGCGCTCCTTGCTGGACCACAGAAAACAAATGGG...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTTCTGGAAGGCTTGGTaGTTGCACTGCCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVFWKAW*LHCLVR
Trigger: TCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAA...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCGAGCGACCGTGCTTCTaGAAGGCTTGGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFERPCF*KAWWLH
Trigger: GTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTC...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCATGTCGGAGGTGGTaGTGGAGCGACCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVSCRRW*WSDRAS
Trigger: AGAAGCACGGTCGCTCCACCACCACCTCCGACATGA...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTTGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 4 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSCPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGAAGCGCATCATCTCTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGCCTCATGAACAGCATTaGGGCTGTCAGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: EKRIISTQARSYDKSMQPPHEQH*GCQRSR
Trigger: CCGGCTTCTCTGACAGCCCCAATGCTGTTCATGAGG...CGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGATGATGCGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTGCCCACTTTGAGAGCTaGGATTGCTGCAAAATATGG +
Preference number: 4 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRAHFES*DCCKIW
Trigger: CCATATTTTGCAGCAATCTCAGCTCTCAAAGTGGGC...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AAGCGCATCATCTCTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGTGCCCTGGACATTTCTaGGAAGCGCATCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: KRIISTQARSYDKSMQPGCPGHF*EAHHLY
Trigger: GTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCA...CCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGATGATGCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAGGCCATCCGCGTCGATaGCAACAGGGATGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKGHPRR*QQGCPW
Trigger: CCAGGGACATCCCTGTTGTCATCGACGCGGATGGCC...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGTGCCCAGGGCTTGGCTaGGTCTTAGCACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQCPGLG*VLAQIH
Trigger: ATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCA...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGCCCAGGGCTTGGCTaGGTCTTAGCACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFCPGLG*VLAQIH
Trigger: ATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCA...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATGGTTGCACTGCCTGGTaGGAGAGCAGGCGCCAAACG +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNGCTAW*ESRRQT
Trigger: CGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACC...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVRSTLP*RVLAET
Trigger: GGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCT...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTGTTTACTTCTGGTCTaGGCGGGCTCAGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACCLLLV*AGSGFK
Trigger: TTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACA...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGTGCAGCCCTTCACCGTaGCCGTCCCCGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRCSPSP*PSPVRS
Trigger: AGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCA...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGAC +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGRTRLC*FLSIRD
Trigger: GTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCT...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGACACGAAACCGTACCATaGCCCGCTAAGACATGGGAC +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGHETVP*PAKTWD
Trigger: GTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTG...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTGATTGCTGCAAAATATaGGGCTCCAGTGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACDCCKI*GSSVLL
Trigger: CAGGAGTACACTGGAGCCCCATATTTTGCAGCAATC...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ATGAGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACCCTCATGAACAGCATTaGGGCTGTCAAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: MSWRTKQPSDGPSQCSRDPHEQH*GCQELG
Trigger: ACCCAGTTCTTGACAGCCCCAATGCTGTTCATGAGG...GTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAACTTCCAAAATGCCCTaGACATTTCTGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTTSKMP*TFLRSA
Trigger: TGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGT...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCTCCACCTCACTTCCAAAATGCCCTaGACATTTCTGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: QARSYDKSMQPGQPLLHLTSKMP*TFLRSA
Trigger: TGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGT...GAGGTGGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGACCCATTTGTTTTCTGTaGTCCAGCAAGGAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGPICFL*SSKERP
Trigger: TGGGCGCTCCTTGCTGGACCACAGAAAACAAATGGG...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCCCCATTTGTTTTCTGTaGTCCAGCAAGGAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVPICFL*SSKERP
Trigger: TGGGCGCTCCTTGCTGGACCACAGAAAACAAATGGG...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAATGCTTCTGGAAGGCTTaGTGGTTGCACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQCFWKA*WLHCLV
Trigger: CACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCA...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCAGAGCGACCGTGCTTCTaGAAGGCTTGGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPERPCF*KAWWLH
Trigger: GTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTC...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAAGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQVPVYF*SARAQV
Trigger: AACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCAC...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGAAACTTCGCCGATCTaGGAGCAGGCCGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGETSPI*EQAEKL
Trigger: GAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTC...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGGGATACCAGTGTCTTTACTaGACGCGAACATCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: GERSSPLMDPVSAVGTQGYQCLY*TRTSLR
Trigger: CCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA...TCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGACCTCATGAACAGCATTaGGGCTGTCACTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGPHEQH*GCHSSA
Trigger: TGCAGACGAGTGACAGCCCCAATGCTGTTCATGAGG...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424185.7
CDS-3UTR TCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATAGTCTGCGCCCACTTTaGGAGCTGAGATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADSLRPL*ELRLLQ
Trigger: TTGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACT...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAAAGTCTGCGCCCACTTTaGGAGCTGAGATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQSLRPL*ELRLLQ
Trigger: TTGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACT...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCGATGTCCCTGGCCTTTaGCACTTCCAAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFDVPGL*HFQNAL
Trigger: CAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATC...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCATGAGGGCCGGCTGCTaGGCGACCAGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLWKDATESIREHPNARVMRAGC*ATSHRP
Trigger: TGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCAT...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACTGCCCAGGGCTTGGCTaGGTCTTAGCACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNCPGLG*VLAQIH
Trigger: ATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCA...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACTTTCAAAGAGCTTGCTaGAGGCGGCCCCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: HEECWLKPQLPVSLLDANFQRAC*RRPPPR
Trigger: CCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAA...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAATGAAGAGTGTTGGCTaGAACCGCAGTTACCAGTGT +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSMKSVG*NRSYQC
Trigger: ACACTGGTAACTGCGGTTTCAGCCAACACTCTTCAT...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVRSTLP*RVLAET
Trigger: GGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCT...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTGGCCTTAATCACAGGTaGGGCCGCACTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETGLNHR*GRTGTE
Trigger: TTCTGTGCCAGTGCGGCCGCACCTGTGATTAAGGCC...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACGACAGGAGGTCCCCTTaGCCTCCACACCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHDRRSP*PPHLRL
Trigger: CAGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTC...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGGACAGGAGGTCCCCTTaGCCTCCACACCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRDRRSP*PPHLRL
Trigger: CAGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTC...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTCTTCTGTTCCCATGGTaGCTCCAAAAGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVLLFPW*LQKGFQ
Trigger: TTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAG...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGAGGACACGGCTGTGCTaGTTCCTAAGCATACGTGAC +
Preference number: 4 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQRTRLC*FLSIRD
Trigger: GTCACGTATGCTTAGGAAGCAGCACAGCCGTGTCCT...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACCACGAAACCGTACCATaGCCCGCTAAGACATGGGAC +
Preference number: 4 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNHETVP*PAKTWD
Trigger: GTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTG...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGGTCTGCGATTGCTGCAAAATATaGGGCTCCAGTGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: PITHTLSPVQGACLLLVCDCCKI*GSSVLL
Trigger: CAGGAGTACACTGGAGCCCCATATTTTGCAGCAATC...GCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAGGGGCTGTCAAGAACTaGGTGGACGATCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKGAVKN*VDDQLR
Trigger: CCGGAGCTGATCGTCCACCCAGTTCTTGACAGCCCC...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTCAACAGGGATGTCCCTaGCCTTTGACACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: WVRIFPSHTRSPPSKVPVQQGCP*PLTLPK
Trigger: TTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTG...AACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGACGTTGCCCAGGGCTTaGCTGAGTCTTAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVTLPRA*LSLSTD
Trigger: ATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGT...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTTCTGGAAGGCTTGGTaGTTGCACTGCCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVFWKAW*LHCLVR
Trigger: TCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAA...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAACGATCATGTCGGAGGTaGTGGTGGAGCGACCGTGCT +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKRSCRR*WWSDRA
Trigger: AGCACGGTCGCTCCACCACCACCTCCGACATGATCG...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCATTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGTGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 4 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQCPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGCCACCAGGAGAGGGCTaGACCCATTTGTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQPPGEG*THLFSV
Trigger: CACAGAAAACAAATGGGTCCAGCCCTCTCCTGGTGG...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCGCCCACTTTGAGAGCTaGGATTGCTGCAAAATATGG +
Preference number: 4 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVAHFES*DCCKIW
Trigger: CCATATTTTGCAGCAATCTCAGCTCTCAAAGTGGGC...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAATGCCCTGGACATTTCTaGGAAGCGCATCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQCPGHF*EAHHLY
Trigger: GTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCA...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACGATGTCCCTGGCCTTTaGCACTTCCAAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNDVPGL*HFQNAL
Trigger: CAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATC...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACGGCCATCCGCGTCGATaGCAACAGGGATGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHGHPRR*QQGCPW
Trigger: CCAGGGACATCCCTGTTGTCATCGACGCGGATGGCC...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACCCACGTGGTTGGGAGTaGGCACAGCCTTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHPRGWE*AQPSGS
Trigger: GCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGG...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACCACGTGGTTGGGAGTaGGCACAGCCTTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIREPRGWE*AQPSGS
Trigger: GCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGG...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAAGGTTGCACTGCCTGGTaGGAGAGCAGGCGCCAAACG +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIREGCTAW*ESRRQT
Trigger: CGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACC...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGGCCAAAAAGACTCTaGAGGGAACCAGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: HGTREHVNVRPLQENHPQRPKRL*REPGGF
Trigger: AAACCCTCCTGGTTCCCTTCAGAGTCTTTTTGGCCT...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATAGGCCAAAAAGACTCTaGAGGGAACCAGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADRPKRL*REPGGF
Trigger: AAACCCTCCTGGTTCCCTTCAGAGTCTTTTTGGCCT...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATAAGCCAACACCCGGGGACCCCTaGCCAGCTCCCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: KGFQTKSSLITLEYVNKPTPGDP*PAPCRR
Trigger: CCTCCGGCAGGGAGCTGGGCAGGGGTCCCCGGGTGT...TGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAGATGGACCCAGTCAGTaGAGTCGGGACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKDGPSQ*SRDSGR
Trigger: TCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATC...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCGCACCAGGCCCAGCATaGCTCAAGTCCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYAAPGPA*LKSSRA
Trigger: GGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGC...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACGGAGGGTTTGGCCCTTaGTGTGGAAAGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNGGFGP*CGKMLL
Trigger: CAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCC...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAACATCTGGGGCATGTCTaGATCACAGGGTATCACTCA +
Preference number: 4 (lower is better)
Translates to: HGTREHVNVRPLQENHPQHLGHV*ITGYHS
Trigger: TGAGTGATACCCTGTGATGCAGACATGCCCCAGATG...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCAGGTGCGGCCGCACTaGCACAGAACACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRQVRPH*HRTRGT
Trigger: TGTCCCACGTGTTCTGTGCCAGTGCGGCCGCACCTG...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCCAGGTGCGGCCGCACTaGCACAGAACACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYAQVRPH*HRTRGT
Trigger: TGTCCCACGTGTTCTGTGCCAGTGCGGCCGCACCTG...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACCTCATGAACAGCATTaGGGCTGTCAAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQPHEQH*GCQELG
Trigger: ACCCAGTTCTTGACAGCCCCAATGCTGTTCATGAGG...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTACGTTGCCCAGGGCTTaGCTGAGTCTTAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSTLPRA*LSLSTD
Trigger: ATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGT...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACTTCTGGAAGGCTTGGTaGTTGCACTGCCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNFWKAW*LHCLVR
Trigger: TCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAA...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATTCATGTCGGAGGTGGTaGTGGAGCGACCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNSCRRW*WSDRAS
Trigger: AGAAGCACGGTCGCTCCACCACCACCTCCGACATGA...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACTCATGTCGGAGGTGGTaGTGGAGCGACCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HEECWLKPQLPVSLLDANSCRRW*WSDRAS
Trigger: AGAAGCACGGTCGCTCCACCACCACCTCCGACATGA...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTGAAACTTCGCCGATCTaGGAGCAGGCCGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETETSPI*EQAEKL
Trigger: GAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTC...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGGGACACCGGAGAGCGTaGGACAGGAGGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRGHRRA*DRRRLR
Trigger: TCTGAGACGCCTCCTGTCCCACGCTCTCCGGTGTCC...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACCCACCAGGAGAGGGCTaGACCCATTTGTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNPPGEG*THLFSV
Trigger: CACAGAAAACAAATGGGTCCAGCCCTCTCCTGGTGG...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTCCAAAATGCCCTGGACATTTCTGAGAAGCGCATCATCTCTACCCAAGCCAGGACTCACAGAACTGGGTaGACGATCAGCTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: FQNALDISEKRIISTQARTHRTG*TISSGL
Trigger: CAGCCCGGAGCTGATCGTCCACCCAGTTCTGTGAGT...CCTGGCTTGGGTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCCCACTTTGAGAGCTaGGATTGCTGCAAAATATGG +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGAHFES*DCCKIW
Trigger: CCATATTTTGCAGCAATCTCAGCTCTCAAAGTGGGC...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACTGCCCTGGACATTTCTaGGAAGCGCATCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNCPGHF*EAHHLY
Trigger: GTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCA...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATTGCCCAGGGCTTGGCTaGGTCTTAGCACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNCPGLG*VLAQIH
Trigger: ATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCA...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGGAGGCTGTCAATTTCAAGTCTaGTATGCCCCCATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: YHGDPCVDTDTGERGTGGCQFQV*YAPICF
Trigger: AAAACAAATGGGGGCATATCAGACTTGAAATTGACA...GCCTCCTGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR TCA 90 bp GGTCTCCTTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: GLLSAITAPGPACLKSSRNLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...TCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAAGGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAAATGAAGAGTGTTGGCTaGAACCGCAGTTACCAGTGT +
Preference number: 4 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQMKSVG*NRSYQC
Trigger: ACACTGGTAACTGCGGTTTCAGCCAACACTCTTCAT...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGTGGAAAGATGCTACTaGAAGTATAAGAGAACACCC +
Preference number: 4 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSVERCY*KYKRTP
Trigger: GGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCAC...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGTGTTTACTTCTGGTCTaGGCGGGCTCAGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQCLLLV*AGSGFK
Trigger: TTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACA...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGCTTCTGTTCCCATGGTaGCTCCAAAAGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVLLFPW*LQKGFQ
Trigger: TTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAG...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACCATCCCCGGGCCAAATaGAATCGACCTTACCTCGTC +
Preference number: 4 (lower is better)
Translates to: HEECWLKPQLPVSLLDANHPRAK*NRPYLV
Trigger: GACGAGGTAAGGTCGATTCCATTTGGCCCGGGGATG...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGGGGGCTGTCAAGAACTaGGTGGACGATCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRGAVKN*VDDQLR
Trigger: CCGGAGCTGATCGTCCACCCAGTTCTTGACAGCCCC...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAACTTCCAAAATGCCCTaGACATTTCTGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGTSKMP*TFLRSA
Trigger: TGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGT...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATCTTAGCACAGATCCATaGCTGTCATCGCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHLSTDP*LSSLSI
Trigger: TATGGACAGCGATGACAGCCATGGATCTGTGCTAAG...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGACTTAGCACAGATCCATaGCTGTCATCGCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGLSTDP*LSSLSI
Trigger: TATGGACAGCGATGACAGCCATGGATCTGTGCTAAG...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAGCACCTGCTGGCCGTTaGAGAGGATGTCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENEAPAGR*RGCRAL
Trigger: GAGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGC...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGTGCTTCTGGAAGGCTTaGTGGTTGCACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKCFWKA*WLHCLV
Trigger: CACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCA...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAATGTCGGAGGTGGTGGTaGAGCGACCGTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIRECRRWW*SDRASG
Trigger: TCCAGAAGCACGGTCGCTCCACCACCACCTCCGACA...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATCCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAACTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: HGTREHVNVRPLQENHPQLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTGGACACCGGAGAGCGTaGGACAGGAGGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: MSASQGITQESSSGQKDSGHRRA*DRRRLR
Trigger: TCTGAGACGCCTCCTGTCCCACGCTCTCCGGTGTCC...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTACCAGTGTCTTTACTaGACGCGAACATCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVYQCLY*TRTSLR
Trigger: CCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGTGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQCHEEC*LKPQLP
Trigger: TGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCA...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATTGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADCHEEC*LKPQLP
Trigger: TGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCA...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFCHEEC*LKPQLP
Trigger: TGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCA...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGATGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGCHEEC*LKPQLP
Trigger: TGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCA...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGAAAAGTAGAATCCATCTaGGGCATGTCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: QVENLASTVRLQHTRGSGKVESI*GMSASQ
Trigger: CTGTGATGCAGACATGCCCCAGATGGATTCTACTTT...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAATGGCACAGTTTTTCTaGAAAAGTTCACATGTAGAC +
Preference number: 4 (lower is better)
Translates to: GGYHGDPCVDTDTGERGTMAQFF*KSSHVD
Trigger: GTCTACATGTGAACTTTTCCAGAAAAACTGTGCCAT...TGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCCACCAGGAGAGGGCTaGACCCATTTGTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETPPGEG*THLFSV
Trigger: CACAGAAAACAAATGGGTCCAGCCCTCTCCTGGTGG...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AGGCCATCCGCGTCGATGACAACAGGGATGTCCCTGGCCTTTGACACTTCCAAAAAGACAGAGGAGGTATaGTATTTCTCACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RPSASMTTGMSLAFDTSKKTEEV*YFSPAA
Trigger: TGCAGCTGGTGAGAAATATCATACCTCCTCTGTCTT...TTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTGTCATCGACGCGGATGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR TCA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGCCCACTTTGAGAGCTaGGATTGCTGCAAAATATGG +
Preference number: 4 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSAHFES*DCCKIW
Trigger: CCATATTTTGCAGCAATCTCAGCTCTCAAAGTGGGC...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTTTTCAAAGAGCTTGCTaGAGGCGGCCCCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: MSASQGITQESSSGQKDSFQRAC*RRPPPR
Trigger: CCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAA...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGGTCTGCAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: PITHTLSPVQGACLLLVCNLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...GCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: VGPDFPITHTLSPVQGACKQSHH*LPWSMS
Trigger: TGACATACTCCAGGGTAATCAATGATGACTTTGTTT...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTATGAAGAGTGTTGGCTaGAACCGCAGTTACCAGTGT +
Preference number: 4 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSMKSVG*NRSYQC
Trigger: ACACTGGTAACTGCGGTTTCAGCCAACACTCTTCAT...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKRSTLP*RVLAET
Trigger: GGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCT...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTAGGCCAAAAAGACTCTaGAGGGAACCAGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETRPKRL*REPGGF
Trigger: AAACCCTCCTGGTTCCCTTCAGAGTCTTTTTGGCCT...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGGAGGCATATTTCTCACCAGCTaGAAAGTATTTTCCATATCC +
Preference number: 4 (lower is better)
Translates to: YHGDPCVDTDTGERGTGGIFLTS*KVFSIS
Trigger: GGATATGGAAAATACTTTGCAGCTGGTGAGAAATAT...GCCTCCTGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAAGGCCTTAATCACAGGTaGGGCCGCACTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIREGLNHR*GRTGTE
Trigger: TTCTGTGCCAGTGCGGCCGCACCTGTGATTAAGGCC...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAGTGGTGGAGCGACCGTaGTTCTGGAAGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENEVVERP*FWKAWW
Trigger: CCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCAC...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTCTTCTGTTCCCATGGTaGCTCCAAAAGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSLLFPW*LQKGFQ
Trigger: TTGGAAACCCTTTTGGAGGCACCATGGGAACAGAAG...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTCGGTCCGGTCTGCCCTaGTGGGGCCGGTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIRSGLP*WGRWVS
Trigger: TGATACCCACCGGCCCCAGCAGGGCAGACCGGACCG...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAGGAGGGTTTGGCCCTTaGTGTGGAAAGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKGGFGP*CGKMLL
Trigger: CAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCC...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGTCTGCAAGCCCGGATTaGCCCACAGCGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSSASPD*PTARTQ
Trigger: CTGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGA...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424185.7
ENST00000680254.1
CDS-3UTR CCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCTGGCACAGAACACGTaGGACAAGTCTGCGCCCACT +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRLAQNT*DKSAPT
Trigger: AGTGGGCGCAGACTTGTCCCACGTGTTCTGTGCCAG...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCCTGTCAAGAACTGGGTaGACGATCAGCTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYALSRTG*TISSGL
Trigger: CAGCCCGGAGCTGATCGTCCACCCAGTTCTTGACAG...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCTGTCAAGAACTGGGTaGACGATCAGCTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRLSRTG*TISSGL
Trigger: CAGCCCGGAGCTGATCGTCCACCCAGTTCTTGACAG...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAACGTTGCCCAGGGCTTaGCTGAGTCTTAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKTLPRA*LSLSTD
Trigger: ATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGT...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGGCACCTGCTGGCCGTTaGAGAGGATGTCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSAPAGR*RGCRAL
Trigger: GAGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGC...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATTTCTGGAAGGCTTGGTaGTTGCACTGCCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNFWKAW*LHCLVR
Trigger: TCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAA...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACTCATGTCGGAGGTGGTaGTGGAGCGACCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHSCRRW*WSDRAS
Trigger: AGAAGCACGGTCGCTCCACCACCACCTCCGACATGA...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAATGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKCPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAGGAGGAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATAAAGTAGAATCCATCTaGGGCATGTCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: EEERRAPAERVTSRNFADKVESI*GMSASQ
Trigger: CTGTGATGCAGACATGCCCCAGATGGATTCTACTTT...ATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTATGGCACAGTTTTTCTaGAAAAGTTCACATGTAGAC +
Preference number: 4 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGMAQFF*KSSHVD
Trigger: GTCTACATGTGAACTTTTCCAGAAAAACTGTGCCAT...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACCCACCAGGAGAGGGCTaGACCCATTTGTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HEECWLKPQLPVSLLDANPPGEG*THLFSV
Trigger: CACAGAAAACAAATGGGTCCAGCCCTCTCCTGGTGG...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCGCTCCAGTGTACTCCTaGCAGCCTCCAACTACGCCT +
Preference number: 4 (lower is better)
Translates to: LLWKDATESIREHPNARVAPVYS*QPPTTP
Trigger: AGGCGTAGTTGGAGGCTGTCAGGAGTACACTGGAGC...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGTGCCCAGGGCTTGGCTaGGTCTTAGCACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRCPGLG*VLAQIH
Trigger: ATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCA...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAAGGTTGCACTGCCTGGTaGGAGAGCAGGCGCCAAACG +
Preference number: 4 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQGCTAW*ESRRQT
Trigger: CGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACC...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGTTTCAAAGAGCTTGCTaGAGGCGGCCCCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSFQRAC*RRPPPR
Trigger: CCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAA...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAAACGAAGCAGCCCTCTaGTGGACCCAGTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENENEAAL*WTQSVQ
Trigger: CTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTT...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAGGCCTTAATCACAGGTaGGGCCGCACTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENEGLNHR*GRTGTE
Trigger: TTCTGTGCCAGTGCGGCCGCACCTGTGATTAAGGCC...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTGACAGGAGGTCCCCTTaGCCTCCACACCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIDRRSP*PPHLRL
Trigger: CAGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTC...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCACCCGAGGTCGACACTaGCATGAAGAGTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYATRGRH*HEECWL
Trigger: CAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACACCCGAGGTCGACACTaGCATGAAGAGTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHTRGRH*HEECWL
Trigger: CAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGCATCTGGGGCATGTCTaGATCACAGGGTATCACTCA +
Preference number: 4 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKHLGHV*ITGYHS
Trigger: TGAGTGATACCCTGTGATGCAGACATGCCCCAGATG...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCCATCCCCGGGCCAAATaGAATCGACCTTACCTCGTC +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYAHPRAK*NRPYLV
Trigger: GACGAGGTAAGGTCGATTCCATTTGGCCCGGGGATG...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR CCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGGGGGCTGTCAAGAACTaGGTGGACGATCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSGAVKN*VDDQLR
Trigger: CCGGAGCTGATCGTCCACCCAGTTCTTGACAGCCCC...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGCCTCATGAACAGCATTaGGGCTGTCAAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKPHEQH*GCQELG
Trigger: ACCCAGTTCTTGACAGCCCCAATGCTGTTCATGAGG...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCAACTTCCAAAATGCCCTaGACATTTCTGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPTSKMP*TFLRSA
Trigger: TGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGT...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTACTTCCAAAATGCCCTaGACATTTCTGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSTSKMP*TFLRSA
Trigger: TGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGT...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAACTGCTGAACTCCACGTaGTTGGGAGTGAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENELLNST*LGVSTA
Trigger: GGCTGTGCTCACTCCCAACCACGTGGAGTTCAGCAG...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTTAGCACAGATCCATaGCTGTCATCGCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETLSTDP*LSSLSI
Trigger: TATGGACAGCGATGACAGCCATGGATCTGTGCTAAG...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGGGGCCGCAGCTACCCTaGGCTCTGGTTTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSGPQLP*ALVLTP
Trigger: AGGAGTCAAAACCAGAGCCCAGGGTAGCTGCGGCCC...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR TCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGGCTCCAGTGTACTCCTaGCAGCCTCCAACTACGCCT +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSAPVYS*QPPTTP
Trigger: AGGCGTAGTTGGAGGCTGTCAGGAGTACACTGGAGC...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATAAGCCAGGCCATCCGCGTCGATaGCAACAGGGATGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KGFQTKSSLITLEYVNKPGHPRR*QQGCPW
Trigger: CCAGGGACATCCCTGTTGTCATCGACGCGGATGGCC...TGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAATGAAGAGTGTTGGCTaGAACCGCAGTTACCAGTGT +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKMKSVG*NRSYQC
Trigger: ACACTGGTAACTGCGGTTTCAGCCAACACTCTTCAT...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYARSTLP*RVLAET
Trigger: GGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCT...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAAAGGTCGACACTGCCATaGAGAGTGTTGGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIRERSTLP*RVLAET
Trigger: GGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCT...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAACCTACGACAAGAGCATaGAGCCGGGGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQPTTRA*SRGSHF
Trigger: GAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACTGTTTACTTCTGGTCTaGGCGGGCTCAGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: HEECWLKPQLPVSLLDANCLLLV*AGSGFK
Trigger: TTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACA...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: MSASQGITQESSSGQKDSLPRPR*LFTSGL
Trigger: CAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAG...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AATTCTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTATCTGCAAGCCCGGATTaGCCCACAGCGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: NSQWQPIYAQVENLASTVSASPD*PTARTQ
Trigger: CTGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGA...TACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424185.7
ENST00000680254.1
CDS-3UTR GCA 90 bp AATTCTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTAGGGCTGTCACTCGTCTaGAAGCCCGGATTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: NSQWQPIYAQVENLASTVGLSLV*KPGLPH
Trigger: GTGGGGCAATCCGGGCTTGCAGACGAGTGACAGCCC...TACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424185.7
CDS-3UTR CCA 90 bp TTCCAAAATGCCCTGGACATTTCTGAGAAGCGCATCATCTCTACCCAAGCCAGGCAACAGGGATGTCCCTaGCCTTTGACACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FQNALDISEKRIISTQARQQGCP*PLTLPK
Trigger: TTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTG...CCTGGCTTGGGTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATCTTAGCACAGATCCATaGCTGTCATCGCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNLSTDP*LSSLSI
Trigger: TATGGACAGCGATGACAGCCATGGATCTGTGCTAAG...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGACGTTGCCCAGGGCTTaGCTGAGTCTTAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LWKDATESIREHPNARVRTLPRA*LSLSTD
Trigger: ATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGT...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATAAGCCAGCACCTGCTGGCCGTTaGAGAGGATGTCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: KGFQTKSSLITLEYVNKPAPAGR*RGCRAL
Trigger: GAGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGC...TGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ATTTCTGTCTTCCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTCGGCTGCTGCCTTCCTaGCTGCACACAAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ISVFPVTTKELRKVQEYFRLLPS*LHTSTC
Trigger: GCAGGTGCTTGTGTGCAGCCAGGAAGGCAGCAGCCG...AAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGGAAGACAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ATTTCTGTCTTCCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGGACAGCAGGAGGTGTaGGGAAGTGGGCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: ISVFPVTTKELRKVQEYFGQQEV*GSGRRG
Trigger: ACCACGACGCCCACTTCCCCACACCTCCTGCTGTCC...AAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGGAAGACAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR CCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENEVPVYF*SARAQV
Trigger: AACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCAC...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: MSASQGITQESSSGQKDSVPVYF*SARAQV
Trigger: AACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCAC...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCCCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: LLWKDATESIREHPNARVPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATTACCAGTGTCTTTACTaGACGCGAACATCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNYQCLY*TRTSLR
Trigger: CCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTAAAGTAGAATCCATCTaGGGCATGTCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETKVESI*GMSASQ
Trigger: CTGTGATGCAGACATGCCCCAGATGGATTCTACTTT...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAAGACAGAGGAGGTATaGTATTTCTCACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKKTEEV*YFSPAA
Trigger: TGCAGCTGGTGAGAAATATCATACCTCCTCTGTCTT...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAAGTCTGCGCCCACTTTaGGAGCTGAGATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENESLRPL*ELRLLQ
Trigger: TTGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACT...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAATGCCCTGGACATTTCTaGGAAGCGCATCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIRECPGHF*EAHHLY
Trigger: GTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCA...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFKQSHH*LPWSMS
Trigger: TGACATACTCCAGGGTAATCAATGATGACTTTGTTT...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGKQSHH*LPWSMS
Trigger: TGACATACTCCAGGGTAATCAATGATGACTTTGTTT...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTGTGGAAAGATGCTACTaGAAGTATAAGAGAACACCC +
Preference number: 4 (lower is better)
Translates to: AERVTSRNFADLGAGRETVERCY*KYKRTP
Trigger: GGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCAC...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATAAGCCACCTACGACAAGAGCATaGAGCCGGGGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: KGFQTKSSLITLEYVNKPPTTRA*SRGSHF
Trigger: GAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG...TGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ATTTCTGTCTTCCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTGGTGGAGCGACCGTaGTTCTGGAAGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ISVFPVTTKELRKVQEYFVVERP*FWKAWW
Trigger: CCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCAC...AAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGGAAGACAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGT +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIRELRTRL*CFLSIR
Trigger: ACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAG...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCCTAAGGACACGGCTGTaGTGCTTCCTAAGCATACGT +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYALRTRL*CFLSIR
Trigger: ACGTATGCTTAGGAAGCAGCACAGCCGTGTCCTTAG...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AATTCTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGATCATGTCGGAGGTaGTGGTGGAGCGACCGTGCT +
Preference number: 4 (lower is better)
Translates to: NSQWQPIYAQVENLASTVRSCRR*WWSDRA
Trigger: AGCACGGTCGCTCCACCACCACCTCCGACATGATCG...TACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAATGGCACAGTTTTTCTaGAAAAGTTCACATGTAGAC +
Preference number: 4 (lower is better)
Translates to: ERRAPAERVTSRNFADLGMAQFF*KSSHVD
Trigger: GTCTACATGTGAACTTTTCCAGAAAAACTGTGCCAT...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGGATGTCCCTGGCCTTTaGCACTTCCAAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSDVPGL*HFQNAL
Trigger: CAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATC...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAACCTGGGCTCTGGTTTTaGCTCCTGTTTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENEPGLWF*LLFQSQ
Trigger: CTGAGATTGAAACAGGAGTCAAAACCAGAGCCCAGG...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR GCA 90 bp AATTCTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTAGATGGACCCAGTCAGTaGAGTCGGGACTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: NSQWQPIYAQVENLASTVDGPSQ*SRDSGR
Trigger: TCTCCCTGAGTCCCGACTGCACTGACTGGGTCCATC...TACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp GGAAAGTTCAGGAATACTTTGTTTAGTGTCGCCATAACATCTCCAACCATGCATACCCGAGGTCGACACTaGCATGAAGAGTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKFRNTLFSVAITSPTMHTRGRH*HEECWL
Trigger: CAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT...ATGCATGGTTGGAGATGTTATGGCGACACTAAACAAAGTATTCCTGAACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAAACCCGAGGTCGACACTaGCATGAAGAGTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQTRGRH*HEECWL
Trigger: CAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAACATCTGGGGCATGTCTaGATCACAGGGTATCACTCA +
Preference number: 4 (lower is better)
Translates to: PDTTKLVTTLKEDELENEHLGHV*ITGYHS
Trigger: TGAGTGATACCCTGTGATGCAGACATGCCCCAGATG...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTTTTCTAAAACTCGTCTaGAAGCCCGGATTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: MSASQGITQESSSGQKDSFLKLV*KPGLPH
Trigger: GTGGGGCAATCCGGGCTTGCAGACGAGTTTTAGAAA...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000680254.1
CDS-3UTR CCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACAACAGGGATGTCCCTaGCCTTTGACACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIREQQGCP*PLTLPK
Trigger: TTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTG...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACCAACAGGGATGTCCCTaGCCTTTGACACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHQQGCP*PLTLPK
Trigger: TTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTG...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTCTGCTGAACTCCACGTaGTTGGGAGTGAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: FWKSSHVDSEASEVRRQILLNST*LGVSTA
Trigger: GGCTGTGCTCACTCCCAACCACGTGGAGTTCAGCAG...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAAGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQVPVYF*SARAQV
Trigger: AACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCAC...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAACCTTCAGCACACGCGTaGGTCCGGATTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQPSAHA*VRIFPS
Trigger: TGATGGGAAAATCCGGACCCACGCGTGTGCTGAAGG...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTCGTCATACAGTCTGCTaGACTCCACGTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIRHTVC*TPRGWE
Trigger: CTCCCAACCACGTGGAGTTCAGCAGACTGTATGACG...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAAGGAGGGTTTGGCCCTTaGTGTGGAAAGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQGGFGP*CGKMLL
Trigger: CAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCC...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGAAAGTTCAGGAATACTTTGTTTAGTGTCGCCATAACATCTCCAACCATGCATACGTTGCCCAGGGCTTaGCTGAGTCTTAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: GKFRNTLFSVAITSPTMHTLPRA*LSLSTD
Trigger: ATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGT...ATGCATGGTTGGAGATGTTATGGCGACACTAAACAAAGTATTCCTGAACTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AATTCTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTATGCTTCTGGAAGGCTTaGTGGTTGCACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: NSQWQPIYAQVENLASTVCFWKA*WLHCLV
Trigger: CACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCA...TACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ATTTCTGTCTTCCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTTGCTTCTGGAAGGCTTaGTGGTTGCACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ISVFPVTTKELRKVQEYFCFWKA*WLHCLV
Trigger: CACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCA...AAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGGAAGACAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCCTCAAGTTGAAAATCTaGCAAGCACCGTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLWKDATESIREHPNARVLKLKI*QAPYAF
Trigger: GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAG...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGAAAGTTCAGGAATACTTTGTTTAGTGTCGCCATAACATCTCCAACCATGCATTGCCCCGCTAAGACATaGGACCAGAGAACACGTCAA +
Preference number: 4 (lower is better)
Translates to: GKFRNTLFSVAITSPTMHCPAKT*DQRTRQ
Trigger: TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA...ATGCATGGTTGGAGATGTTATGGCGACACTAAACAAAGTATTCCTGAACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ATTTCTGTCTTCCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGATGTCCCTGGCCTTTaGCACTTCCAAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: ISVFPVTTKELRKVQEYFDVPGL*HFQNAL
Trigger: CAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATC...AAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGGAAGACAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTGATGTCCCTGGCCTTTaGCACTTCCAAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIDVPGL*HFQNAL
Trigger: CAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATC...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKKQSHH*LPWSMS
Trigger: TGACATACTCCAGGGTAATCAATGATGACTTTGTTT...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACGTGGAAAGATGCTACTaGAAGTATAAGAGAACACCC +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHVERCY*KYKRTP
Trigger: GGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCAC...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGATTTCAAGTCTGATATaGCCCCATTTGTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKISSLI*PHLFSV
Trigger: CACAGAAAACAAATGGGGGCATATCAGACTTGAAAT...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR CCA 90 bp AATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCACTTCCAAAATGCCCTaGACATTTCTGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: NGNQFMLKLKIWQAPYAFTSKMP*TFLRSA
Trigger: TGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGT...GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATAAGCCACCCATTTGTTTTCTGTaGTCCAGCAAGGAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: KGFQTKSSLITLEYVNKPPICFL*SSKERP
Trigger: TGGGCGCTCCTTGCTGGACCACAGAAAACAAATGGG...TGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGAAGACAGAGGAGGTATaGTATTTCTCACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PSYYQGAKESSGILCLVSKTEEV*YFSPAA
Trigger: TGCAGCTGGTGAGAAATATCATACCTCCTCTGTCTT...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYANLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp ACCAGGAGGGTTTGGCCCTTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAAAATTTATGCTCAAGTTaGAAATCTGGCAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: TRRVWPLLWKDATESIRENLCSS*KSGKHR
Trigger: ACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATT...TTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp AATTCTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTAAGGCCAAAAAGACTCTaGAGGGAACCAGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: NSQWQPIYAQVENLASTVRPKRL*REPGGF
Trigger: AAACCCTCCTGGTTCCCTTCAGAGTCTTTTTGGCCT...TACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp GGAAAGTTCAGGAATACTTTGTTTAGTGTCGCCATAACATCTCCAACCATGCATTACCAGTGTCTTTACTaGACGCGAACATCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: GKFRNTLFSVAITSPTMHYQCLY*TRTSLR
Trigger: CCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTA...ATGCATGGTTGGAGATGTTATGGCGACACTAAACAAAGTATTCCTGAACTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
3UTR CAA 72 bp TGGTGCCTCCAAAAGGGTTTCCAAACAAAGTCATCATaGATTACCCTGGAGTATGTCAATAAGCCAAACACC +
Preference number: 4 (lower is better)
Translates to: WCLQKGFQTKSS*ITLEYVNKPNT
Trigger: GGTGTTTGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACAAACAAAGTCATCATTaGTTACCCTGGAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: WKDATESIREHPNARVRHKQSHH*LPWSMS
Trigger: TGACATACTCCAGGGTAATCAATGATGACTTTGTTT...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR GCA 90 bp AAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATAAGCCATGTTTACTTCTGGTCTaGGCGGGCTCAGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KGFQTKSSLITLEYVNKPCLLLV*AGSGFK
Trigger: TTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACA...TGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTCAACAGGGATGTCCCTaGCCTTTGACACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIQQGCP*PLTLPK
Trigger: TTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTG...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTTTCCTTCTGTTCCCATaGTGCCTCCAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FWKSSHVDSEASEVRRQIFLLFP*CLQKGF
Trigger: GAAACCCTTTTGGAGGCACCATGGGAACAGAAGGAA...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp ATTTCTGTCTTCCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTTGCCATGAAGAGTGTTaGCTGAAACCGCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: ISVFPVTTKELRKVQEYFCHEEC*LKPQLP
Trigger: TGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCA...AAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGGAAGACAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR TCA 90 bp GGAAAGTTCAGGAATACTTTGTTTAGTGTCGCCATAACATCTCCAACCATGCATGTGGAAAGATGCTACTaGAAGTATAAGAGAACACCC +
Preference number: 4 (lower is better)
Translates to: GKFRNTLFSVAITSPTMHVERCY*KYKRTP
Trigger: GGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCAC...ATGCATGGTTGGAGATGTTATGGCGACACTAAACAAAGTATTCCTGAACTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CCA 90 bp AAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATAAGCCAATGGCACAGTTTTTCTaGAAAAGTTCACATGTAGAC +
Preference number: 4 (lower is better)
Translates to: KGFQTKSSLITLEYVNKPMAQFF*KSSHVD
Trigger: GTCTACATGTGAACTTTTCCAGAAAAACTGTGCCAT...TGGCTTATTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 90 bp TGCGTCCAGTGGCGGCCCGTACAGCGCGAGTGCGGCCGAGAGCAATaGGACAACGACCGCGCCGGCGACGGCAGTTCCGGCCCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: CVQWRPVQRECGREQ*DNDRAGDGSSGPRA
Trigger: CGCGCGGGGGCCGGAACTGCCGTCGCCGGCGCGGTCGTTGTCGCATTGCTCTCGGCCGCACTCGCGCTGTACGGGCCGCCACTGGACGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS-3UTR CAA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCGACAGGAGGTCCCCTaGCCCTCCACACCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: GHVRPQAAALHRARPRSGRQEVP*PSTPAA
Trigger: AGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTCG...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCAGCACCTGCTGGCCGTaGGAGAGGATGTCGCGCTCT +
Preference number: 5 (lower is better)
Translates to: QAAALHRARPRSGLPCWGSTCWP*ERMSRS
Trigger: AGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGCT...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS TCA 90 bp CGACAACGACCGCGCCGGCGACGGCAGTTCCGGCCCCCGCGCGTGTaGCCATCCCCGGGCCAAATGGAATCGACCTTACCTCGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: RQRPRRRRQFRPPRV*PSPGQMESTLPRLQ
Trigger: TTGCAGACGAGGTAAGGTCGATTCCATTTGGCCCGGGGATGGTCACACGCGCGGGGGCCGGAACTGCCGTCGCCGGCGCGGTCGTTGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS TCA 90 bp TGGAGCGACCGTGCTTCTGGAAGGCTTGGTGGTTGCACTGCCTGGTaGGAGAGCAGGCGCCAAACGCGGCCACCAGGAGAGGGCTGGACC +
Preference number: 5 (lower is better)
Translates to: WSDRASGRLGGCTAW*ESRRQTRPPGEGWT
Trigger: GGTCCAGCCCTCTCCTGGTGGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 90 bp GTGGTGGTGGAGCGACCGTGCTTCTGGAAGGCTTGGTGGTTGCACTaGCTGGTGAGAGAGCAGGCGCCAAACGCGGCCACCAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: VVVERPCFWKAWWLH*LVREQAPNAATRRG
Trigger: CCCTCTCCTGGTGGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGTGGACCACCGTCACGTaGCCCAGGGCTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGWTTVT*PRAWLS
Trigger: ACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCA...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTAGGAGGGTTTGGCCCTaGCTGTGGAAAGATGCTACT +
Preference number: 5 (lower is better)
Translates to: GHVRPQAAALHRARPRSGRRVWP*LWKDAT
Trigger: AGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCT...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTGAGGGCTGGACCCATTaGTTTTCTGTGGTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: GHVRPQAAALHRARPRSGEGWTH*FSVVQQ
Trigger: TTGCTGGACCACAGAAAACAAATGGGTCCAGCCCTC...ACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 90 bp GCCCCCACCTCGGCGATCATGTCGGAGGTGGTGGTGGAGCGACCGTaGTTCTGGAAGGCTTGGTGGTTGCACTGCCTGGTGAGAGAGCAG +
Preference number: 5 (lower is better)
Translates to: APTSAIMSEVVVERP*FWKAWWLHCLVREQ
Trigger: CTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGATCGCCGAGGTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp ATGTCGGAGGTGGTGGTGGAGCGACCGTGCTTCTGGAAGGCTTGGTaGTTGCACTGCCTGGTGAGAGAGCAGGCGCCAAACGCGGCCACC +
Preference number: 5 (lower is better)
Translates to: MSEVVVERPCFWKAW*LHCLVREQAPNAAT
Trigger: GGTGGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGCAGGTTTCAAAGAGCTaGCTGAAGGCGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGQVSKS*LKAAPT
Trigger: GGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTG...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp ATCATGTCGGAGGTGGTGGTGGAGCGACCGTGCTTCTGGAAGGCTTaGTGGTTGCACTGCCTGGTGAGAGAGCAGGCGCCAAACGCGGCC +
Preference number: 5 (lower is better)
Translates to: IMSEVVVERPCFWKA*WLHCLVREQAPNAA
Trigger: GGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp ACCTCGGCGATCATGTCGGAGGTGGTGGTGGAGCGACCGTGCTTCTaGAAGGCTTGGTGGTTGCACTGCCTGGTGAGAGAGCAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: TSAIMSEVVVERPCF*KAWWLHCLVREQAP
Trigger: TGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGATCGCCGAGGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CACAGCCTTCCGGTAGCCATGGATGAGGGCCGGCTGCTGAGCGACCAGCCACAGCTGAACTCCACGTGGTaGGGAGTGAGCACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: HSLPVAMDEGRLLSDQPQLNSTW*GVSTAF
Trigger: GAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAG...CTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CAA 90 bp GTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCCTGATATGCCCCCATTaGTTTTCTGTGGTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: VRPQAAALHRARPRSGLPLICPH*FSVVQQ
Trigger: TTGCTGGACCACAGAAAACAAATGGGGGCATATCAG...GGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR CAA 90 bp CATCTCTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGCAGCCACTGTCTGCAAGCCCGGATaGCCCCACAGCGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: HLYPSQVLRQEHAAGAATVCKPG*PHSEDP
Trigger: TGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGAC...AGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS GCA 90 bp AACTGGGTGGACGATCAGCTCCGGGCTGTAGGCCTTAATCACAGGTaGGGCCGCACTGGCACAGAACACGTGGGACAAGTCTGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: NWVDDQLRAVGLNHR*GRTGTEHVGQVCAH
Trigger: GTGGGCGCAGACTTGTCCCACGTGTTCTGTGCCAGTGCGGCCGCACCTGTGATTAAGGCCTACAGCCCGGAGCTGATCGTCCACCCAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000679389.1
ENST00000679968.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCCAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 5 (lower is better)
Translates to: QAAALHRARPRSGLPCWGQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS TCA 90 bp CTGTTTACTTCTGGTCTGCGCGGGCTCAGGTTTCAAAGAGCTTGCTaGAGGCGGCCCCCACCTCGGCGATCATGTCGGAGGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LFTSGLRGLRFQRAC*RRPPPRRSCRRWWW
Trigger: CCACCACCACCTCCGACATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS TCA 90 bp CCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCTCCACCTCATaGACAGCATTGGGGCTGTCACTCGTCTGCAAGCCCGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: PTTRACSRGSHFSTS*TALGLSLVCKPGLP
Trigger: GGGCAATCCGGGCTTGCAGACGAGTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424185.7
CDS TCA 90 bp CCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCTCCACCTCATaGACAGCATTGGGGCTGTCAGAGAAGCCGGCGCAGAGCGACTCA +
Preference number: 5 (lower is better)
Translates to: PTTRACSRGSHFSTS*TALGLSEKPAQSDS
Trigger: TGAGTCGCTCTGCGCCGGCTTCTCTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS GCA 90 bp ACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGGTCTaGGCGGGCTCAGGTTTCAAAGAGCTTGCTGAAGGCGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: THTLSPVQGACLLLV*AGSGFKELAEGGPH
Trigger: GTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp GCATTGGGGCTGTCAGAGAAGCCGGCGCAGAGCGACTCACAGAACTaGGTGGACGATCAGCTCCGGGCTGTAGGCCTTAATCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: ALGLSEKPAQSDSQN*VDDQLRAVGLNHRC
Trigger: GCACCTGTGATTAAGGCCTACAGCCCGGAGCTGATCGTCCACCCAGTTCTGTGAGTCGCTCTGCGCCGGCTTCTCTGACAGCCCCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CAA 90 bp ATGAGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTGGACCACCGTCACGTaGCCCAGGGCTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: MSWRTKQPSDGPSQCSRDWTTVT*PRAWLS
Trigger: ACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCA...GTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GAACGAAGGGCGCCGGCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGACGACAGGAGGTCCCCTaGCCCTCCACACCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: ERRAPAERVTSRNFADLGRQEVP*PSTPAA
Trigger: AGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTCG...TCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGCCGGCGCCCTTCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGGGACAGGTTTCAAAGAGCTaGCTGAAGGCGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: GERSSPLMDPVSAVGTQGQVSKS*LKAAPT
Trigger: GGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTG...TCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp ACAAGCACCTGCTGGCCGTTGGAGAGGATGTCGCGCTCTCCTTTCTaGACCACCGTCACGTTGCCCAGGGCTTGGCTGAGTCTTAGCACA +
Preference number: 5 (lower is better)
Translates to: TSTCWPLERMSRSPF*TTVTLPRAWLSLST
Trigger: TGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp CCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTTTCAAAGAGCTTGCTGAAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PSHTRSPPSKVPVYF*SARAQVSKSLLKAA
Trigger: GGCCGCCTTCAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GAGACAGCACTAGGGGCCACGTCAGACCCCAGGCTGCAGCCCTTCACCGTGCCCCTTCCATCTTGCCCTTaGTGCTTTGTGGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: ETALGATSDPRLQPFTVPLPSCP*CFVEDR
Trigger: TCTGTCTTCCACAAAGCACAAAGGGCAAGATGGAAG...GGGCACGGTGAAGGGCTGCAGCCTGGGGTCTGACGTGGCCCCTAGTGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCTGAACTCCACGTGGTaGGGAGTGAGCACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRLNSTW*GVSTAF
Trigger: GAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAG...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGATGGACCACCGTCACGTaGCCCAGGGCTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: QVENLASTVRLQHTRGSGWTTVT*PRAWLS
Trigger: ACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCA...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTGGAAGGCTTGGTGGTaGCACTGCCTGGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: VGPDFPITHTLSPVQGACWKAWW*HCLVRE
Trigger: CTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCA...ACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTTGGAAGGCTTGGTGGTaGCACTGCCTGGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGWKAWW*HCLVRE
Trigger: CTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCA...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCAGGGAGTGCTTCTGGAAGGCTaGGTGGTTGCACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GERSSPLMDPVSAVGTQGVLLEG*VVALPG
Trigger: ACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCAC...TCCCTGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CAGGCTGCAGCCCTTCACCGTGCCCGTCCCCGGTCCGGTCTGCCCTGCTGGGGCAAGTTCAGGAATACTTaGTTTAGTGTCGCCATAACA +
Preference number: 5 (lower is better)
Translates to: QAAALHRARPRSGLPCWGKFRNT*FSVAIT
Trigger: TGTTATGGCGACACTAAACAAAGTATTCCTGAACTT...GCCCCAGCAGGGCAGACCGGACCGGGGACGGGCACGGTGAAGGGCTGCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS TCA 90 bp CCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTCTCCACCTCATaGACAGCATTGGGGCTGTCAAGAACTGGGTGGACGATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PTTRACSRGSHFSTS*TALGLSRTGWTISS
Trigger: GGAGCTGATCGTCCACCCAGTTCTTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp ATGGATGAGGGCCGGCTGCTGAGCGACCAGCCACAGGCCATCCGCGTCGATGACGCCTATTCTTCCATCTaGCCCTTTGTGCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: MDEGRLLSDQPQAIRVDDAYSSI*PFVLCG
Trigger: TCCACAAAGCACAAAGGGCAAGATGGAAGAATAGGC...GTCATCGACGCGGATGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CAA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAATGGACCACCGTCACGTaGCCCAGGGCTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQWTTVT*PRAWLS
Trigger: ACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCA...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAAAGCACCTGCTGGCCGTaGGAGAGGATGTCGCGCTCT +
Preference number: 5 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQSTCWP*ERMSRS
Trigger: AGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGCT...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GCAGAGAGAGTAACAAGTAGAAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCGACAGGAGGTCCCCTaGCCCTCCACACCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: AERVTSRNFADLGAGRETRQEVP*PSTPAA
Trigger: AGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTCG...AGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTTCTACTTGTTACTCTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAGCCTTCTGTGCTTCTGGAAGGCTaGGTGGTTGCACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LAPSLHQAQHASSPPEPSVLLEG*VVALPG
Trigger: ACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCAC...AGAAGGCTCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 90 bp GGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTGCGCGGGCTCAGGTTTCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: GSGFSHHTHALPRPR*LFTSGLRGLRFQRA
Trigger: AGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp ACCGTCACGTTGCCCAGGGCTTGGCTGAGTCTTAGCACAGATCCATaGCTGTCATCGCTGTCCATAGGGCCTCTGAGCACAGCGTCATAC +
Preference number: 5 (lower is better)
Translates to: TVTLPRAWLSLSTDP*LSSLSIGPLSTASY
Trigger: GTATGACGCTGTGCTCAGAGGCCCTATGGACAGCGATGACAGCCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAGCACACGCGTGGGTCCGGACTGAACTCCACGTGGTaGGGAGTGAGCACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: QVENLASTVRLQHTRGSGLNSTW*GVSTAF
Trigger: GAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAG...TCCGGACCCACGCGTGTGCTGAAGGCGTACGGTGCTTGCCAGATTTTCAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAACGACAGGAGGTCCCCTaGCCCTCCACACCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKRQEVP*PSTPAA
Trigger: AGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTCG...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGCAGGTTTCAAAGAGCTaGCTGAAGGCGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQQVSKS*LKAAPT
Trigger: GGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTG...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGTCTCCTTAGCGCCATCACTGCACCAGGCCCAGCATGCCTCAAGTCCTCCAGAAGGAGGGTTTGGCCCTaGCTGTGGAAAGATGCTACT +
Preference number: 5 (lower is better)
Translates to: GLLSAITAPGPACLKSSRRRVWP*LWKDAT
Trigger: AGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCT...TCTGGAGGACTTGAGGCATGCTGGGCCTGGTGCAGTGATGGCGCTAAGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 90 bp ATGTCGCGCTCTCCTTTCTGGACCACCGTCACGTTGCCCAGGGCTTaGCTGAGTCTTAGCACAGATCCATGGCTGTCATCGCTGTCCATA +
Preference number: 5 (lower is better)
Translates to: MSRSPFWTTVTLPRA*LSLSTDPWLSSLSI
Trigger: TATGGACAGCGATGACAGCCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAGGAGAGCGCGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGACTTGCCCTTTGTGCTTaGTGGAAGACAGAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: CPAKTWDQRTRQRQAAPGLALCA*WKTEEV
Trigger: TACCTCCTCTGTCTTCCACAAAGCACAAAGGGCAAG...TCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GCCGGGGCAGCCACTTCTCCACCTCATGAACAGCATTGGGGCTGTCAGAGAAGCCTTGCCCTTTGTGCTTaGTGGAAGACAGAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: AGAATSPPHEQHWGCQRSLALCA*WKTEEV
Trigger: TACCTCCTCTGTCTTCCACAAAGCACAAAGGGCAAG...GCTTCTCTGACAGCCCCAATGCTGTTCATGAGGTGGAGAAGTGGCTGCCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CAA 90 bp ATCTCTACCCAAGCCAGGTCCTACGACAAGAGCATGCAGCCGGGGCAGCCACTTAAGTCTGCGCCCACTTaGAGAGCTGAGATTGCTGCA +
Preference number: 5 (lower is better)
Translates to: ISTQARSYDKSMQPGQPLKSAPT*RAEIAA
Trigger: TGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACTT...AAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CAA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAATGGAAGGCTTGGTGGTaGCACTGCCTGGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQWKAWW*HCLVRE
Trigger: CTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCA...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp ACCCGAGGTCGACACTGCCATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTGGAAGGCTTGGTGGTaGCACTGCCTGGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: TRGRHCHEECWLKPQLPVWKAWW*HCLVRE
Trigger: CTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCA...CACTGGTAACTGCGGTTTCAGCCAACACTCTTCATGGCAGTGTCGACCTCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCGTGCTTCTGGAAGGCTaGGTGGTTGCACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFVLLEG*VVALPG
Trigger: ACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCAC...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GCCGGTGGGTATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGCAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 5 (lower is better)
Translates to: AGGYHGDPCVDTDTGERGQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...CCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATACCCACCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATGTCTGCAAGCCCGGATaGCCCCACAGCGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNVCKPG*PHSEDP
Trigger: TGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGAC...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424185.7
ENST00000680254.1
CDS-3UTR CAA 90 bp CTGGGGCATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAGTCTGCAAGCCCGGATaGCCCCACAGCGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: LGHVCITGYHSRVIIRPKVCKPG*PHSEDP
Trigger: TGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGAC...TTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACATGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424185.7
ENST00000680254.1
CDS-3UTR CAA 90 bp CTTCAGCACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTGCCTATTCTTCCATCTaGCCCTTTGTGCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: LQHTRGSGFSHHTHALPRAYSSI*PFVLCG
Trigger: TCCACAAAGCACAAAGGGCAAGATGGAAGAATAGGC...ACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGTGCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CGGCTGTGCTGCTTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCAAGTCTGCGCCCACTTaGAGAGCTGAGATTGCTGCA +
Preference number: 5 (lower is better)
Translates to: RLCCFLSIRDHDTVFPRVKSAPT*RAEIAA
Trigger: TGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACTT...GACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAAGCAGCACAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACAGCACCTGCTGGCCGTaGGAGAGGATGTCGCGCTCT +
Preference number: 5 (lower is better)
Translates to: HEECWLKPQLPVSLLDANSTCWP*ERMSRS
Trigger: AGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGCT...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AGCTGGAGAACGAAGCAGCCCTCTGATGGACCCAGTCAGTGCAGTCGGGACTCACTTCCATCTTGCCCTTaGTGCTTTGTGGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: SWRTKQPSDGPSQCSRDSLPSCP*CFVEDR
Trigger: TCTGTCTTCCACAAAGCACAAAGGGCAAGATGGAAG...TGAGTCCCGACTGCACTGACTGGGTCCATCAGAGGGCTGCTTCGTTCTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTCGACAGGAGGTCCCCTaGCCCTCCACACCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: MSASQGITQESSSGQKDSRQEVP*PSTPAA
Trigger: AGCCGCAGGTGTGGAGGGCAAGGGGACCTCCTGTCG...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACCAGGTTTCAAAGAGCTaGCTGAAGGCGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: HEECWLKPQLPVSLLDANQVSKS*LKAAPT
Trigger: GGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTG...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAACGTCAGAGGAGGGTTTGGCCCTaGCTGTGGAAAGATGCTACT +
Preference number: 5 (lower is better)
Translates to: ETVPCPAKTWDQRTRQRQRRVWP*LWKDAT
Trigger: AGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCT...CTGACGTTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGGAGGGTTTGGCCCTaGCTGTGGAAAGATGCTACT +
Preference number: 5 (lower is better)
Translates to: HGTREHVNVRPLQENHPQRRVWP*LWKDAT
Trigger: AGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCT...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCGAGGGCTGGACCCATTaGTTTTCTGTGGTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: RIFPSHTRSPPSKVPVYFEGWTH*FSVVQQ
Trigger: TTGCTGGACCACAGAAAACAAATGGGTCCAGCCCTC...GAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CATGGGACCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAACTTGCCCTTTGTGCTTaGTGGAAGACAGAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: HGTREHVNVRPLQENHPQLALCA*WKTEEV
Trigger: TACCTCCTCTGTCTTCCACAAAGCACAAAGGGCAAG...TTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGGTCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CTCAATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCAGCACCTGCTGGCCGTaGGAGAGGATGTCGCGCTCT +
Preference number: 5 (lower is better)
Translates to: LNGNQFMLKLKIWQAPYASTCWP*ERMSRS
Trigger: AGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGCT...GGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACAGCACCTGCTGGCCGTaGGAGAGGATGTCGCGCTCT +
Preference number: 5 (lower is better)
Translates to: WKDATESIREHPNARVRHSTCWP*ERMSRS
Trigger: AGAGCGCGACATCCTCTCCAACGGCCAGCAGGTGCT...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TATCATGGGGACCCCTGTGTAGACACGGACACCGGAGAGCGTGGGACAGGAGGCTCTCAGGACCCCAAATaGTCAATTTCAAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: YHGDPCVDTDTGERGTGGSQDPK*SISSLI
Trigger: TATCAGACTTGAAATTGACAATTTGGGGTCCTGAGA...GCCTCCTGTCCCACGCTCTCCGGTGTCCGTGTCTACACAGGGGTCCCCATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR CAA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATGTGCTTCTGGAAGGCTaGGTGGTTGCACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNVLLEG*VVALPG
Trigger: ACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCAC...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACAGGAGGGTTTGGCCCTaGCTGTGGAAAGATGCTACT +
Preference number: 5 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNRRVWP*LWKDAT
Trigger: AGTAGCATCTTTCCACAGCAAGGGCCAAACCCTCCT...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCACTTGCCCTTTGTGCTTaGTGGAAGACAGAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPLALCA*WKTEEV
Trigger: TACCTCCTCTGTCTTCCACAAAGCACAAAGGGCAAG...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCTGGACCACCGTCACGTaGCCCAGGGCTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: NGNQFMLKLKIWQAPYAFWTTVT*PRAWLS
Trigger: ACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCA...GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TTCCTAAGCATACGTGACCACGATACTGTCTTTCCCCGGGTCTCCTTAGCGCCACCCTGGGCTCTGGTTTaGACTCCTGTTTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: FLSIRDHDTVFPRVSLAPPWALV*TPVSIS
Trigger: TGAGATTGAAACAGGAGTCAAAACCAGAGCCCAGGG...TGGCGCTAAGGAGACCCGGGGAAAGACAGTATCGTGGTCACGTATGCTTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309957.3
CDS-3UTR CAA 90 bp ACACGCGTGGGTCCGGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTCAAACAAAGTCATCATaGATTACCCTGGAGTATGTC +
Preference number: 5 (lower is better)
Translates to: TRVGPDFPITHTLSPVQGQTKSS*ITLEYV
Trigger: GACATACTCCAGGGTAATCAATGATGACTTTGTTTG...ACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCCGGACCCACGCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTCAGGTTTCAAAGAGCTaGCTGAAGGCGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: MSASQGITQESSSGQKDSQVSKS*LKAAPT
Trigger: GGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTG...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCGTGCTTCTGGAAGGCTaGGTGGTTGCACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: NGNQFMLKLKIWQAPYAFVLLEG*VVALPG
Trigger: ACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCAC...GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AACACCCTAATGCACGCGTCAGGCACGAAACCGTACCATGCCCCGCTAAGACATCAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 5 (lower is better)
Translates to: NTLMHASGTKPYHAPLRHQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...ATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCTGACGCGTGCATTAGGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TCCAAAATGCCCTGGACATTTCTGAGAAGCGCATCATCTCTACCCAAGCCAGGTCTTCCATCTTGCCCTTaGTGCTTTGTGGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: SKMPWTFLRSASSLPKPGLPSCP*CFVEDR
Trigger: TCTGTCTTCCACAAAGCACAAAGGGCAAGATGGAAG...ACCTGGCTTGGGTAGAGATGATGCGCTTCTCAGAAATGTCCAGGGCATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS-3UTR CAA 90 bp TGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACATCCCTAAGGCCTATTCTTCCATCTaGCCCTTTGTGCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: CWLKPQLPVSLLDANIPKAYSSI*PFVLCG
Trigger: TCCACAAAGCACAAAGGGCAAGATGGAAGAATAGGC...CTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATGCCTATTCTTCCATCTaGCCCTTTGTGCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNAYSSI*PFVLCG
Trigger: TCCACAAAGCACAAAGGGCAAGATGGAAGAATAGGC...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACAAGTCTGCGCCCACTTaGAGAGCTGAGATTGCTGCA +
Preference number: 5 (lower is better)
Translates to: WKDATESIREHPNARVRHKSAPT*RAEIAA
Trigger: TGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACTT...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGCTGAACTCCACGTGGTaGGGAGTGAGCACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: PSYYQGAKESSGILCLVSLNSTW*GVSTAF
Trigger: GAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAG...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCACGAGGGCTGGACCCATTaGTTTTCTGTGGTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: WKDATESIREHPNARVRHEGWTH*FSVVQQ
Trigger: TTGCTGGACCACAGAAAACAAATGGGTCCAGCCCTC...GTGCCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AATGGCAACCAATTTATGCTCAAGTTGAAAATCTGGCAAGCACCGTACGCCTTCAAGTCTGCGCCCACTTaGAGAGCTGAGATTGCTGCA +
Preference number: 5 (lower is better)
Translates to: NGNQFMLKLKIWQAPYAFKSAPT*RAEIAA
Trigger: TGCAGCAATCTCAGCTCTCAAAGTGGGCGCAGACTT...GAAGGCGTACGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTGGTTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGAAAGTTCAGGAATACTTTGTTTAGTGTCGCCATAACATCTCCAACCATGCATCTGAACTCCACGTGGTaGGGAGTGAGCACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: GKFRNTLFSVAITSPTMHLNSTW*GVSTAF
Trigger: GAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAG...ATGCATGGTTGGAGATGTTATGGCGACACTAAACAAAGTATTCCTGAACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCTCCAAAAGGGTTTCCAAACAAAGTCATCATTGATTACCCTGGAGTATGTCAATGGAAGGCTTGGTGGTaGCACTGCCTGGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PPKGFPNKVIIDYPGVCQWKAWW*HCLVRE
Trigger: CTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCA...TTGACATACTCCAGGGTAATCAATGATGACTTTGTTTGGAAACCCTTTTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AGGCACGAAACCGTACCATGCCCCGCTAAGACATGGGACCAGAGAACACGTCAAAAGTTCAGGAATACTTaGTTTAGTGTCGCCATAACA +
Preference number: 5 (lower is better)
Translates to: RHETVPCPAKTWDQRTRQKFRNT*FSVAIT
Trigger: TGTTATGGCGACACTAAACAAAGTATTCCTGAACTT...TTGACGTGTTCTCTGGTCCCATGTCTTAGCGGGGCATGGTACGGTTTCGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCAGAGAACACGTCAACGTCAGGCCGCTCCAGGAAAACCATCCACAAAGACAACCAAACAAAGTCATCATaGATTACCCTGGAGTATGTC +
Preference number: 5 (lower is better)
Translates to: PENTSTSGRSRKTIHKDNQTKSS*ITLEYV
Trigger: GACATACTCCAGGGTAATCAATGATGACTTTGTTTG...GTTGTCTTTGTGGATGGTTTTCCTGGAGCGGCCTGACGTTGACGTGTTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAAGAGGGCTGGACCCATTaGTTTTCTGTGGTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: PDTTKLVTTLKEDELENEEGWTH*FSVVQQ
Trigger: TTGCTGGACCACAGAAAACAAATGGGTCCAGCCCTC...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TTCTGGAAAAGTTCACATGTAGACAGTGAAGCTTCTGAAGTTAGGCGTCAAATTCTGAACTCCACGTGGTaGGGAGTGAGCACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: FWKSSHVDSEASEVRRQILNSTW*GVSTAF
Trigger: GAAGGCTGTGCTCACTCCCAACCACGTGGAGTTCAG...AATTTGACGCCTAACTTCAGAAGCTTCACTGTCTACATGTGAACTTTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGATTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTAAGTTCAGGAATACTTaGTTTAGTGTCGCCATAACA +
Preference number: 5 (lower is better)
Translates to: GFSHHTHALPRPRCLFTSKFRNT*FSVAIT
Trigger: TGTTATGGCGACACTAAACAAAGTATTCCTGAACTT...AGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCCAGTTACTACCAAGGAGCTAAGGAAAGTTCAGGAATACTTTGTTTAGTGTCGCTTGCCCTTTGTGCTTaGTGGAAGACAGAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: PSYYQGAKESSGILCLVSLALCA*WKTEEV
Trigger: TACCTCCTCTGTCTTCCACAAAGCACAAAGGGCAAG...CGACACTAAACAAAGTATTCCTGAACTTTCCTTAGCTCCTTGGTAGTAACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp ATGTCTGCATCACAGGGTATCACTCAAGAGTCATCATCAGGCCAAAAAGACTCTCTTCCATCTTGCCCTTaGTGCTTTGTGGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: MSASQGITQESSSGQKDSLPSCP*CFVEDR
Trigger: TCTGTCTTCCACAAAGCACAAAGGGCAAGATGGAAG...AGAGTCTTTTTGGCCTGATGATGACTCTTGAGTGATACCCTGTGATGCAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAACTTCCATCTTGCCCTTaGTGCTTTGTGGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: PDTTKLVTTLKEDELENELPSCP*CFVEDR
Trigger: TCTGTCTTCCACAAAGCACAAAGGGCAAGATGGAAG...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp TTGCTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCGCCTATTCTTCCATCTaGCCCTTTGTGCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: LLWKDATESIREHPNARVAYSSI*PFVLCG
Trigger: TCCACAAAGCACAAAGGGCAAGATGGAAGAATAGGC...GACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309957.3
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp AAACTTCGCCGATCTGGGAGCAGGCCGAGAAACTCTGTTGAGCTGCTAAAGAATAAGTTCAGGAATACTTaGTTTAGTGTCGCCATAACA +
Preference number: 5 (lower is better)
Translates to: KLRRSGSRPRNSVELLKNKFRNT*FSVAIT
Trigger: TGTTATGGCGACACTAAACAAAGTATTCCTGAACTT...ATTCTTTAGCAGCTCAACAGAGTTTCTCGGCCTGCTCCCAGATCGGCGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CATGAAGAGTGTTGGCTGAAACCGCAGTTACCAGTGTCTTTACTGGACGCGAACAAGTTCAGGAATACTTaGTTTAGTGTCGCCATAACA +
Preference number: 5 (lower is better)
Translates to: HEECWLKPQLPVSLLDANKFRNT*FSVAIT
Trigger: TGTTATGGCGACACTAAACAAAGTATTCCTGAACTT...GTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACACTCTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CTGTGGAAAGATGCTACTGAAAGTATAAGAGAACACCCTAATGCACGCGTCAGGCAAACAAAGTCATCATaGATTACCCTGGAGTATGTC +
Preference number: 5 (lower is better)
Translates to: LWKDATESIREHPNARVRQTKSS*ITLEYV
Trigger: GACATACTCCAGGGTAATCAATGATGACTTTGTTTG...CCTGACGCGTGCATTAGGGTGTTCTCTTATACTTTCAGTAGCATCTTTCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp CCAGATACCACCAAGCTAGTCACCACTTTAAAAGAAGATGAGCTGGAGAACGAACAAACAAAGTCATCATaGATTACCCTGGAGTATGTC +
Preference number: 5 (lower is better)
Translates to: PDTTKLVTTLKEDELENEQTKSS*ITLEYV
Trigger: GACATACTCCAGGGTAATCAATGATGACTTTGTTTG...TTCGTTCTCCAGCTCATCTTCTTTTAAAGTGGTGACTAGCTTGGTGGTATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS-3UTR CAA 90 bp GGAAAGTTCAGGAATACTTTGTTTAGTGTCGCCATAACATCTCCAACCATGCATCAATTTATGCTCAAGTaGAAAATCTGGCAAGCACCG +
Preference number: 5 (lower is better)
Translates to: GKFRNTLFSVAITSPTMHQFMLK*KIWQAP
Trigger: CGGTGCTTGCCAGATTTTCAACTTGAGCATAAATTG...ATGCATGGTTGGAGATGTTATGGCGACACTAAACAAAGTATTCCTGAACTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 72 bp TGGCGGCCCGTACAGCGCGAGTGCGGCCGAGAGCAATaGGACAACGACCGCGCCGGCGACGGCAGTTCCGGC +
Preference number: 6 (lower is better)
Translates to: WRPVQRECGREQ*DNDRAGDGSSG
Trigger: GCCGGAACTGCCGTCGCCGGCGCGGTCGTTGTCGCATTGCTCTCGGCCGCACTCGCGCTGTACGGGCCGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS TCA 72 bp CCGCGCCGGCGACGGCAGTTCCGGCCCCCGCGCGTGTaGCCATCCCCGGGCCAAATGGAATCGACCTTACCT +
Preference number: 6 (lower is better)
Translates to: PRRRRQFRPPRV*PSPGQMESTLP
Trigger: AGGTAAGGTCGATTCCATTTGGCCCGGGGATGGTCACACGCGCGGGGGCCGGAACTGCCGTCGCCGGCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309957.3
ENST00000680505.1
CDS GCA 72 bp CAGCATTGGGGCTGTCACTCGTCTGCAAGCCCGGATTaGCCCACAGCGAGGACCCAGGGCCATCGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: QHWGCHSSASPD*PTARTQGHRAA
Trigger: TGCTGCCCGATGGCCCTGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGACGAGTGACAGCCCCAATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424185.7
CDS CCA 72 bp CGGCCCCCACCTCGGCGATCATGTCGGAGGTGGTGGTaGAGCGACCGTGCTTCTGGAAGGCTTGGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: RPPPRRSCRRWW*SDRASGRLGGC
Trigger: GCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGATCGCCGAGGTGGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 72 bp AGGCGGCCCCCACCTCGGCGATCATGTCGGAGGTGGTaGTGGAGCGACCGTGCTTCTGGAAGGCTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: RRPPPRRSCRRW*WSDRASGRLGG
Trigger: ACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGATCGCCGAGGTGGGGGCCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CAA 72 bp ACAGCATTGGGGCTGTCACTCGTCTGCAAGCCCGGATaGCCCCACAGCGAGGACCCAGGGCCATCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: TALGLSLVCKPG*PHSEDPGPSGS
Trigger: GCTGCCCGATGGCCCTGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGACGAGTGACAGCCCCAATGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424185.7
CDS CAA 90 bp TCGGAGGTGGTGGTGGAGCGACCGTGCTTCTGGAAGGCTTGGTGGTaGCACTGCCTGGTGAGAGAGCAGGCGCCAAACGCGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: SEVVVERPCFWKAWW*HCLVREQAPNAATR
Trigger: CCTGGTGGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS TCA 72 bp CGTGCTTCTGGAAGGCTTGGTGGTTGCACTGCCTGGTaGGAGAGCAGGCGCCAAACGCGGCCACCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: RASGRLGGCTAW*ESRRQTRPPGE
Trigger: CTCTCCTGGTGGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS TCA 72 bp TCTGGTCTGCGCGGGCTCAGGTTTCAAAGAGCTTGCTaGAGGCGGCCCCCACCTCGGCGATCATGTCGGAGG +
Preference number: 6 (lower is better)
Translates to: SGLRGLRFQRAC*RRPPPRRSCRR
Trigger: CCTCCGACATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CAA 90 bp GATCATGTCGGAGGTGGTGGTGGAGCGACCGTGCTTCTGGAAGGCTaGGTGGTTGCACTGCCTGGTGAGAGAGCAGGCGCCAAACGCGGC +
Preference number: 6 (lower is better)
Translates to: DHVGGGGGATVLLEG*VVALPGERAGAKRG
Trigger: GCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 72 bp TCGGCGATCATGTCGGAGGTGGTGGTGGAGCGACCGTaGTTCTGGAAGGCTTGGTGGTTGCACTGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: SAIMSEVVVERP*FWKAWWLHCLV
Trigger: CACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGATCGCCGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 72 bp GTGGTGGTGGAGCGACCGTGCTTCTGGAAGGCTTGGTaGTTGCACTGCCTGGTGAGAGAGCAGGCGCCAAAC +
Preference number: 6 (lower is better)
Translates to: VVVERPCFWKAW*LHCLVREQAPN
Trigger: GTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CAA 90 bp GTGCCTGTTTACTTCTGGTCTGCGCGGGCTCAGGTTTCAAAGAGCTaGCTGAAGGCGGCCCCCACCTCGGCGATCATGTCGGAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: VPVYFWSARAQVSKS*LKAAPTSAIMSEVV
Trigger: CACCACCTCCGACATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 72 bp GACGATCAGCTCCGGGCTGTAGGCCTTAATCACAGGTaGGGCCGCACTGGCACAGAACACGTGGGACAAGTC +
Preference number: 6 (lower is better)
Translates to: DDQLRAVGLNHR*GRTGTEHVGQV
Trigger: GACTTGTCCCACGTGTTCTGTGCCAGTGCGGCCGCACCTGTGATTAAGGCCTACAGCCCGGAGCTGATCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000679389.1
ENST00000679968.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CAA 72 bp TACTTCTGGTCTGCGCGGGCTCAGGTTTCAAAGAGCTaGCTGAAGGCGGCCCCCACCTCGGCGATCATGTCG +
Preference number: 6 (lower is better)
Translates to: YFWSARAQVSKS*LKAAPTSAIMS
Trigger: CGACATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 72 bp ATCATGTCGGAGGTGGTGGTGGAGCGACCGTGCTTCTaGAAGGCTTGGTGGTTGCACTGCCTGGTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: IMSEVVVERPCF*KAWWLHCLVRE
Trigger: CTCTCTCACCAGGCAGTGCAACCACCAAGCCTTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 72 bp CTGTCAGAGAAGCCGGCGCAGAGCGACTCACAGAACTaGGTGGACGATCAGCTCCGGGCTGTAGGCCTTAAT +
Preference number: 6 (lower is better)
Translates to: LSEKPAQSDSQN*VDDQLRAVGLN
Trigger: ATTAAGGCCTACAGCCCGGAGCTGATCGTCCACCCAGTTCTGTGAGTCGCTCTGCGCCGGCTTCTCTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679968.1
CDS CAA 90 bp CCGTTGGAGAGGATGTCGCGCTCTCCTTTCTGGACCACCGTCACGTaGCCCAGGGCTTGGCTGAGTCTTAGCACAGATCCATGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: PLERMSRSPFWTTVT*PRAWLSLSTDPWLS
Trigger: TGACAGCCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 72 bp CTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTGGTCTaGGCGGGCTCAGGTTTCAAAGAGCTTGCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: LSPVQGACLLLV*AGSGFKELAEG
Trigger: GCCTTCAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 72 bp ACACGCTCTCCCCCGTCCAAGGTGCCTGTTTACTTCTaGTCTGCGCGGGCTCAGGTTTCAAAGAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: TRSPPSKVPVYF*SARAQVSKSLL
Trigger: CAGCAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CAA 72 bp AGGATGTCGCGCTCTCCTTTCTGGACCACCGTCACGTaGCCCAGGGCTTGGCTGAGTCTTAGCACAGATCCA +
Preference number: 6 (lower is better)
Translates to: RMSRSPFWTTVT*PRAWLSLSTDP
Trigger: TGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAGGAGAGCGCGACATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS TCA 72 bp CTTTCTGGACCACCGTCACGTTGCCCAGGGCTTGGCTaGGTCTTAGCACAGATCCATGGCTGTCATCGCTGT +
Preference number: 6 (lower is better)
Translates to: LSGPPSRCPGLG*VLAQIHGCHRC
Trigger: ACAGCGATGACAGCCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 72 bp TTTTCCCATCACACACACGCTCTCCCCCGTCCAAGGTaGCTGTTTACTTCTGGTCTGCGCGGGCTCAGGTTT +
Preference number: 6 (lower is better)
Translates to: FSHHTHALPRPR*LFTSGLRGLRF
Trigger: AAACCTGAGCCCGCGCAGACCAGAAGTAAACAGGCACCTTGGACGGGGGAGAGCGTGTGTGTGATGGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 72 bp TTGCCCAGGGCTTGGCTGAGTCTTAGCACAGATCCATaGCTGTCATCGCTGTCCATAGGGCCTCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: LPRAWLSLSTDP*LSSLSIGPLST
Trigger: TGTGCTCAGAGGCCCTATGGACAGCGATGACAGCCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS CCA 72 bp TCTCCTTTCTGGACCACCGTCACGTTGCCCAGGGCTTaGCTGAGTCTTAGCACAGATCCATGGCTGTCATCG +
Preference number: 6 (lower is better)
Translates to: SPFWTTVTLPRA*LSLSTDPWLSS
Trigger: CGATGACAGCCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000424185.7
ENST00000470164.2
ENST00000679389.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 72 bp CCTCCAACTACGCCTATTCTTCCATCTTGCCCTTTGTaGTTTGTGGAAGACAGAGGAGGTATGATATTTCTC +
Preference number: 6 (lower is better)
Translates to: PPTTPILPSCPL*FVEDRGGMIFL
Trigger: GAGAAATATCATACCTCCTCTGTCTTCCACAAAGCACAAAGGGCAAGATGGAAGAATAGGCGTAGTTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000470164.2
ENST00000679389.1
ENST00000679968.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1
CDS GCA 72 bp GTGGAAGACAGAGGAGGTATGATATTTCTCACCAGCTaGAAAGTATTTTCCATATCCTTTATCGAATGTGCT +
Preference number: 6 (lower is better)
Translates to: VEDRGGMIFLTS*KVFSISFIECA
Trigger: AGCACATTCGATAAAGGATATGGAAAATACTTTGCAGCTGGTGAGAAATATCATACCTCCTCTGTCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309957.3
ENST00000470164.2
ENST00000679389.1
ENST00000679968.1
ENST00000680254.1
ENST00000680312.1
ENST00000680505.1