RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAV3 (Homo sapiens)

Ensembl gene IDs: ENSG00000067798

Ensembl transcript IDs: ENST00000397909.7, ENST00000536525.6, ENST00000547725.1, ENST00000548948.5, ENST00000549464.5, ENST00000550042.2, ENST00000550503.1, ENST00000550673.1, ENST00000550788.1, ENST00000551162.1, ENST00000552300.1, ENST00000552895.5, ENST00000644176.1

Found 1403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTaGAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACA +
Preference number: 1 (lower is better)
Translates to: LDLFWNGVSAQHKHY*SPVTSTVWHKGGWT
Trigger: TGTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR CCA 90 bp CCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATaGGGTGAGCGCACAACACAAACACTACTGAAGCCCTGTGACCAG +
Preference number: 1 (lower is better)
Translates to: PFVLMEDWPLGFVLE*GERTTQTLLKPCDQ
Trigger: CTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR GCA 90 bp TTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTATGTaGATAAATTCAGTTCGGATTTCCCTTAGGGCAATAGCACCGTGT +
Preference number: 1 (lower is better)
Translates to: FDPCLRLQSQGDNSM*INSVRISLRAIAPC
Trigger: ACACGGTGCTATTGCCCTAAGGGAAATCCGAACTGAATTTATGCACATAGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR GCA 90 bp TCATGTACAGTTTTGAAGCATGCTCACTCTAGCACTGATAGCTCCTaGATAGTCAAAAACAACTGTAAATACAGGACAAACACACCAGAT +
Preference number: 1 (lower is better)
Translates to: SCTVLKHAHSSTDSS*IVKNNCKYRTNTPD
Trigger: ATCTGGTGTGTTTGTCCTGTATTTACAGTTGTTTTTGACTATGCAGGAGCTATCAGTGCTAGAGTGAGCATGCTTCAAAACTGTACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTGGAGACCACAACTCTaGGTCAGGGCCCTTGACAGG +
Preference number: 2 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDWRPQL*VRALDR
Trigger: CCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGGGCCCTTGACAGGGTaGTTTTATACTGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRGPLTG*FYTGSG
Trigger: ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAGTGACCAGCACCGTGTaGCACAAAGGAGGTTGGACA +
Preference number: 2 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTVTSTV*HKGGWT
Trigger: TGTCCAACCTCCTTTGTGCCACACGGTGCTGGTCAC...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGTGACCAGCACCGTGTaGCACAAAGGAGGTTGGACA +
Preference number: 2 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPVTSTV*HKGGWT
Trigger: TGTCCAACCTCCTTTGTGCCACACGGTGCTGGTCAC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGGGCCCTTGACAGGGTaGTTTTATACTGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPGPLTG*FYTGSG
Trigger: ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCAGAAAGATGGACCCTaGCTGGGGCGAACAGCCCCT +
Preference number: 2 (lower is better)
Translates to: AHHENVAVRIKLALLQFAQKDGP*LGRTAP
Trigger: AGGGGCTGTTCGCCCCAGGCAGGGTCCATCTTTCTG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGGAGACCACAACTCTaGGTCAGGGCCCTTGACAGG +
Preference number: 2 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPWRPQL*VRALDR
Trigger: CCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCAAGATGGACCCTGCCTaGGGCGAACAGCCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: AHHENVAVRIKLALLQFAKMDPA*GEQPLR
Trigger: TCTGAGGGGCTGTTCGCCCCAGGCAGGGTCCATCTT...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACATTTGGCTATCCCATGTaGAATCTGTTCAGTTGCCCT +
Preference number: 2 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTFGYPM*NLFSCP
Trigger: AGGGCAACTGAACAGATTGCACATGGGATAGCCAAA...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCCTGGGTCAGGGCCCTTaGCAGGGTGCTTTTATACTG +
Preference number: 2 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFLGQGP*QGAFIL
Trigger: CAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAG...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR GCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCGCACAATTCCATTTGTaGTTATGGAGGACTGGCCTC +
Preference number: 2 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAAQFHL*LWRTGL
Trigger: GAGGCCAGTCCTCCATAAGCACAAATGGAATTGTGC...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR TCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCAACACAAACACTACTaGAGCCCTGTGACCAGCACC +
Preference number: 2 (lower is better)
Translates to: AHHENVAVRIKLALLQFAQHKHY*SPVTST
Trigger: GGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCAGAAAGATGGACCCTaGCTGGGGCGAACAGCCCCT +
Preference number: 2 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFQKDGP*LGRTAP
Trigger: AGGGGCTGTTCGCCCCAGGCAGGGTCCATCTTTCTG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATGGAGACCACAACTCTaGGTCAGGGCCCTTGACAGG +
Preference number: 2 (lower is better)
Translates to: CLLKLFHLELDGISPHVLWRPQL*VRALDR
Trigger: CCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR CAA 90 bp CCAGTTTGCCACAGTAGTGTTTTTCTGGTGGTTGCACAATTCCATTaGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGG +
Preference number: 2 (lower is better)
Translates to: PVCHSSVFLVVAQFH*CLWRTGLLDLFWNG
Trigger: CCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAATTGTGCAACCACCAGAAAAACACTACTGTGGCAAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR TCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTACAACACAAACACTACTaGAGCCCTGTGACCAGCACC +
Preference number: 2 (lower is better)
Translates to: CLLKLFHLELDGISPHVLQHKHY*SPVTST
Trigger: GGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTG...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR TCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCTGTTCTGGAATGGGGTaGGCGCACAACACAAACACT +
Preference number: 2 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLCSGMG*AHNTNT
Trigger: AGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACA...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGGGCCCTTGACAGGGTaGTTTTATACTGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVGPLTG*FYTGSG
Trigger: ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCAAGTTAAGCTTCCATTaGAATTTAGCATCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPKLSFH*NLASWR
Trigger: CCGCCAAGATGCTAAATTGCAATGGAAGCTTAACTT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGACAGATCAGAAAGATaGACCCTGCCTGGGGCGAAC +
Preference number: 2 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFDRSER*TLPGAN
Trigger: GTTCGCCCCAGGCAGGGTCCATCTTTCTGATCTGTC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTTGGCACAAAGGAGGTTaGACAGATCAGAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGWHKGG*TDQKDG
Trigger: TCCATCTTTCTGATCTGTCCAACCTCCTTTGTGCCA...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCTCTTGGATTTGTTCTaGAATGGGGTGAGCGCACAA +
Preference number: 2 (lower is better)
Translates to: AHHENVAVRIKLALLQFALLDLF*NGVSAQ
Trigger: TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTGGAGGACTGGCCTCTTaGATTTGTTCTGGAATGGGG +
Preference number: 2 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFGGLAS*ICSGMG
Trigger: CCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCC...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR TCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAGGGTCCTTTCCAGTTaGGTAATGGAGCTTTCTATT +
Preference number: 2 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPRVLSS*VMELSI
Trigger: AATAGAAAGCTCCATTACTCAACTGGAAAGGACCCT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTGCAATCTGTTCAGTTaGCCTGTCATTAGGGTCCTT +
Preference number: 2 (lower is better)
Translates to: AHHENVAVRIKLALLQFACNLFS*PVIRVL
Trigger: AAGGACCCTAATGACAGGGCAACTGAACAGATTGCA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR CAA 90 bp AAAGTTGGTGGAGCACATCATGAGAACGTGGCAGTTAGAATTAAATaGGCACTTCTCCAGTTTGCCACAGTAGTGTTTTTCTGGTGGTTG +
Preference number: 2 (lower is better)
Translates to: KVGGAHHENVAVRIK*ALLQFATVVFFWWL
Trigger: CAACCACCAGAAAAACACTACTGTGGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGCTCCACCAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR CAA 90 bp TACCATGGCCTAGCCCTTGGGTTTCATAAACTTAAAACCTGTCCTTaGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGTTTTCATGC +
Preference number: 2 (lower is better)
Translates to: YHGLALGFHKLKTCP*CVVVTSPMTDQFSC
Trigger: GCATGAAAACTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTTATGAAACCCAAGGGCTAGGCCATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTAAGGGAGTGGGCAGGTaGTTTAAAAAGACCACTGTG +
Preference number: 2 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFKGVGR*FKKTTV
Trigger: CACAGTGGTCTTTTTAAACCACCTGCCCACTCCCTT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACCAACTGACCCATTGGTaGTCACAGAGAGTAGCACCA +
Preference number: 2 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYQLTHW*SQRVAP
Trigger: TGGTGCTACTCTCTGTGACCACCAATGGGTCAGTTG...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR GCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTGCACAATTCCATTTGTaGTTATGGAGGACTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LKLFHLELDGISPHVLGFAQFHL*LWRTGL
Trigger: GAGGCCAGTCCTCCATAAGCACAAATGGAATTGTGC...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATGGCACAAAGGAGGTTaGACAGATCAGAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: CLLKLFHLELDGISPHVLWHKGG*TDQKDG
Trigger: TCCATCTTTCTGATCTGTCCAACCTCCTTTGTGCCA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATTCCATTTGTGCTTATaGAGGACTGGCCTCTTGGAT +
Preference number: 2 (lower is better)
Translates to: CLLKLFHLELDGISPHVLFHLCL*RTGLLD
Trigger: ATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTAAGGGAGTGGGCAGGTaGTTTAAAAAGACCACTGTG +
Preference number: 2 (lower is better)
Translates to: LKLFHLELDGISPHVLGFKGVGR*FKKTTV
Trigger: CACAGTGGTCTTTTTAAACCACCTGCCCACTCCCTT...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTAGGGTCCTTTCCAGTTaGGTAATGGAGCTTTCTATT +
Preference number: 2 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVRVLSS*VMELSI
Trigger: AATAGAAAGCTCCATTACTCAACTGGAAAGGACCCT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR TCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTTTGTTCTATAGCAACTaGCCCATTGGTGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSLFYSN*PIGGHR
Trigger: TCTGTGACCACCAATGGGTCAGTTGCTATAGAACAA...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTTTGGCTATCCCATGTaGAATCTGTTCAGTTGCCCT +
Preference number: 2 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFFGYPM*NLFSCP
Trigger: AGGGCAACTGAACAGATTGCACATGGGATAGCCAAA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTGTTTTTCTGGTGGTTaGACAATTCCATTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: AHHENVAVRIKLALLQFACFSGG*TIPFVL
Trigger: AAGCACAAATGGAATTGTGCAACCACCAGAAAAACA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTTGGCACAAAGGAGGTTaGACAGATCAGAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: LKLFHLELDGISPHVLGFWHKGG*TDQKDG
Trigger: TCCATCTTTCTGATCTGTCCAACCTCCTTTGTGCCA...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR TCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTCGTGTAAGGACCTATTaGCTTTGTGACACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSRVRTY*LCDTLK
Trigger: TTTCAGAGTGTCACAAAGTCAATAGGTCCTTACACG...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR GCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTACTCTCTTTAAAGCCTaGCATGACAGATGTACTTTC +
Preference number: 2 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFTLFKA*HDRCTF
Trigger: GAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGACTCTCTTTAAAGCCTaGCATGACAGATGTACTTTC +
Preference number: 2 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQTLFKA*HDRCTF
Trigger: GAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGT...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR TCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGCAGATAATACAGCTTTaGGGGTTTGCATTCTGTATT +
Preference number: 2 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQQIIQL*GFAFCI
Trigger: AATACAGAATGCAAACCCTCAAAGCTGTATTATCTG...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR GCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTAAGCACTGATAGCTCCTaGATAGTCAAAAACAACTGT +
Preference number: 2 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLSTDSS*IVKNNC
Trigger: ACAGTTGTTTTTGACTATGCAGGAGCTATCAGTGCT...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAACAGTAGTGTTTTTCTaGTGGTTGCACAATTCCATT +
Preference number: 2 (lower is better)
Translates to: CLLKLFHLELDGISPHVLTVVFF*WLHNSI
Trigger: AATGGAATTGTGCAACCACCAGAAAAACACTACTGT...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGCTACTATGTTAACTaGTGTTGCTTGGTTGTAAAT +
Preference number: 2 (lower is better)
Translates to: CLLKLFHLELDGISPHVLGYYVN*CCLVVN
Trigger: ATTTACAACCAAGCAACACCAGTTAACATAGTAGCC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR CAA 90 bp ACAAACACACCAGATAATACAGCTTTGAGGGTTTGCATTCTGTATTaGTTTGCAATGTACAGGAAATCTCAGCAAGTGAAACACCTCTTA +
Preference number: 2 (lower is better)
Translates to: TNTPDNTALRVCILY*FAMYRKSQQVKHLL
Trigger: TAAGAGGTGTTTCACTTGCTGAGATTTCCTGTACATTGCAAACAAATACAGAATGCAAACCCTCAAAGCTGTATTATCTGGTGTGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR CAA 90 bp AGACAGTTTTACTTATCCAAAAATATATTGGCTTCATGTACAGTTTaGAAGCATGCTCACTCTAGCACTGATAGCTCCTGCATAGTCAAA +
Preference number: 2 (lower is better)
Translates to: RQFYLSKNILASCTV*KHAHSSTDSSCIVK
Trigger: TTTGACTATGCAGGAGCTATCAGTGCTAGAGTGAGCATGCTTCAAAACTGTACATGAAGCCAATATATTTTTGGATAAGTAAAACTGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR CCA 72 bp CATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTaGAGACCACAACTCTGGGTCAGGGCCCTTGACAGG +
Preference number: 3 (lower is better)
Translates to: HLGGSDLVLLPP*RPQLWVRALDR
Trigger: CCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR TCA 72 bp TTCTGGAATGGGGTGAGCGCACAACACAAACACTACTaGAGCCCTGTGACCAGCACCGTGTGGCACAAAGGA +
Preference number: 3 (lower is better)
Translates to: FWNGVSAQHKHY*SPVTSTVWHKG
Trigger: TCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAATCTGGGTCAGGGCCCTaGACAGGGTGCTTTTATACT +
Preference number: 3 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQSGSGP*TGCFYT
Trigger: AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR CCA 72 bp CTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATaGGGTGAGCGCACAACACAAACACTACTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: LMEDWPLGFVLE*GERTTQTLLKP
Trigger: GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CAA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCTCTGGGTCAGGGCCCTaGACAGGGTGCTTTTATACT +
Preference number: 3 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLSGSGP*TGCFYT
Trigger: AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR GCA 72 bp GAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTaGAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTT +
Preference number: 3 (lower is better)
Translates to: EETKKVQFGYPM*NLFSCPVIRVL
Trigger: AAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CAA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACACTGGCCTCTTGGATTaGTTCTGGAATGGGGTGAGC +
Preference number: 3 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYTGLLD*FWNGVS
Trigger: GCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGT...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CAA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTATAGCAACTGACCCATaGGTGGTCACAGAGAGTAGC +
Preference number: 3 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFIATDP*VVTESS
Trigger: GCTACTCTCTGTGACCACCAATGGGTCAGTTGCTAT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR GCA 72 bp GGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATaGTCATGTTTGGACTGTGTTTCTCAAAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: GPTGMYCRKFCL*SCLDCVSQNGR
Trigger: CCTGCCATTTTGAGAAACACAGTCCAAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CAA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGTTGCACAATTCCATTaGTGCTTATGGAGGACTGGC +
Preference number: 3 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSVAQFH*CLWRTG
Trigger: GCCAGTCCTCCATAAGCACAAATGGAATTGTGCAAC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCAAAGAAAGTCCAGTTaGGCTATCCCATGTGCAATC +
Preference number: 3 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFQRKSS*AIPCAI
Trigger: GATTGCACATGGGATAGCCAAACTGGACTTTCTTTG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR-3UTR CAA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGCAGTTAGAATTAAATaGGCACTTCTCCAGTTTGCC +
Preference number: 3 (lower is better)
Translates to: CLLKLFHLELDGISPHVLAVRIK*ALLQFA
Trigger: GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CAA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCTCATATACTAAAAAGTaGGTGGAGCACATCATGAGA +
Preference number: 3 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLSYTKK*VEHIMR
Trigger: TCTCATGATGTGCTCCACCAACTTTTTAGTATATGA...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR-3UTR CAA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTCTTAAAACCTGTCCTTaGTGTGTGGTGGTAACTTCT +
Preference number: 3 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSLKTCP*CVVVTS
Trigger: AGAAGTTACCACCACACACAAAGGACAGGTTTTAAG...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR GCA 72 bp GTTTTGAAGCATGCTCACTCTAGCACTGATAGCTCCTaGATAGTCAAAAACAACTGTAAATACAGGACAAAC +
Preference number: 3 (lower is better)
Translates to: VLKHAHSSTDSS*IVKNNCKYRTN
Trigger: GTTTGTCCTGTATTTACAGTTGTTTTTGACTATGCAGGAGCTATCAGTGCTAGAGTGAGCATGCTTCAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR GCA 72 bp TGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTATGTaGATAAATTCAGTTCGGATTTCCCTTAGGGCAATA +
Preference number: 3 (lower is better)
Translates to: CLRLQSQGDNSM*INSVRISLRAI
Trigger: TATTGCCCTAAGGGAAATCCGAACTGAATTTATGCACATAGAATTGTCACCCTGACTTTGAAGCCTCAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR TCA 72 bp ACTTATCCAAAAATATATTGGCTTCATGTACAGTTTTaGAGCATGCTCACTCTAGCACTGATAGCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: TYPKIYWLHVQF*SMLTLALIAPA
Trigger: TGCAGGAGCTATCAGTGCTAGAGTGAGCATGCTTCAAAACTGTACATGAAGCCAATATATTTTTGGATAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR CCA 72 bp TATACTAAAAAGTTGGTGGAGCACATCATGAGAACGTaGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTG +
Preference number: 3 (lower is better)
Translates to: YTKKLVEHIMRT*QLELNWHFSSL
Trigger: CAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGCTCCACCAACTTTTTAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTGGAGCATCTCCCGCCTaGAGTCGCGGACATGCCTGG +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGGASPA*SRGHAW
Trigger: CCAGGCATGTCCGCGACTTCAGGCGGGAGATGCTCC...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCGTACCGGACGACGGTaGCTCCAGACTGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRRTGRR*LQTALP
Trigger: CGGCAAGGCAGTCTGGAGTCACCGTCGTCCGGTACG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGAGCATCTCCCGCCTaGAGTCGCGGACATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTGASPA*SRGHAW
Trigger: CCAGGCATGTCCGCGACTTCAGGCGGGAGATGCTCC...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACACGTACCGGACGACGGTaGCTCCAGACTGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTRTGRR*LQTALP
Trigger: CGGCAAGGCAGTCTGGAGTCACCGTCGTCCGGTACG...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTCAGCACTGCCCATGCTaGCCGTACCGGACGACGGTG +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTQHCPC*PYRTTV
Trigger: CACCGTCGTCCGGTACGGGCAGCATGGGCAGTGCTG...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGCGCTGGCAGAGGTaGGGCTGGATTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRRRWQR*GWIWGN
Trigger: GTTCCCCCAAATCCAGCCCCACCTCTGCCAGCGCCT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCTGCCTGAGACCTTGTaGACCACAGGCGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLPETL*TTGAGR
Trigger: TCTGCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACCAGCACTGCCCATaGTGCCCGTACCGGACGACG +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQHQHCP*CPYRTT
Trigger: CGTCGTCCGGTACGGGCAGCATGGGCAGTGCTGGTG...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACACCAGCACTGCCCATaGTGCCCGTACCGGACGACG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEHQHCP*CPYRTT
Trigger: CGTCGTCCGGTACGGGCAGCATGGGCAGTGCTGGTG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACTGGTGCTGGATTTTaGAGGGCGGGGCAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTTGAGF*RAGQAA
Trigger: CGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTCCAGACAAGGAGCCATaGTGGCTGAGGGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTPDKEP*WLRGRS
Trigger: TGACCTCCCCCTCAGCCATCATGGCTCCTTGTCTGG...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTAGGCTCTGGACCTCGTaGGTGCCTGTGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTRLWTS*VPVVSP
Trigger: TGGACTGACCACAGGCACTCACGAGGTCCAGAGCCT...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACCACTACCCGTTCTCATaGGCAGGCTCTGGACCTCGT +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDHYPFS*AGSGPR
Trigger: ACGAGGTCCAGAGCCTGCTCATGAGAACGGGTAGTG...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTCTTCTGGTCGCAGCTaGAGTAAGGCTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDSSGRS*SKAGLS
Trigger: GGAGAGCCCAGCCTTACTTCAGCTGCGACCAGAAGA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTACTACTGAAGCCCTGTaGCCAGCACCGTGTGGCACA +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGTTEAL*PAPCGT
Trigger: TGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGCAGGAATTAAGCACTaGCGCCCAGCCCTGCACAAG +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRAGIKH*RPALHK
Trigger: CTTGTGCAGGGCTGGGCGTCAGTGCTTAATTCCTGC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACACGGTGACTCCAGACTaGCTTGCCGCGCTAATGTGG +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDTVTPD*LAALMW
Trigger: CCACATTAGCGCGGCAAGGCAGTCTGGAGTCACCGT...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACATTAGCCCACCAGCACTaGCCATGCTGCCCGTACCGG +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTLAHQH*PCCPYR
Trigger: CCGGTACGGGCAGCATGGGCAGTGCTGGTGGGCTAA...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCCAGAGGTGACTGGTTaGCAGTGTCCTGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGPEVTG*QCPEAL
Trigger: GAGGGCTTCAGGACACTGGCAACCAGTCACCTCTGG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACACAGAAAGATGGACCCTaGCTGGGGCGAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTQKDGP*LGRTAP
Trigger: AGGGGCTGTTCGCCCCAGGCAGGGTCCATCTTTCTG...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCTGGCTGGCTTCCGATaGAGGGGAAGCGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGLAGFR*RGSVSN
Trigger: GTTACTCACGCTTCCCCTCCATCGGAAGCCAGCCAG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGATGGCGCCCCTCCTTaGGCAGACATGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTDGAPP*ADMPLL
Trigger: GAGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACCTGGTACTGGATCTGTaGCCTCCTCGGCCAGGAATG +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDLVLDL*PPRPGM
Trigger: CATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAG...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCTCTCAGTTTCGAGGTaGTGGCCCCAGCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLSVSR*WPQQTC
Trigger: GCAAGTCTGCTGGGGCCACCACCTCGAAACTGAGAG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTAGAGTGAACCGATGCTaGGCTGGAGGCCAACGAGTG +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGRVNRC*AGGQRV
Trigger: CACTCGTTGGCCTCCAGCCCAGCATCGGTTCACTCT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCCTCGTGAGTGCCTGTaGTCAGTCCAGACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGPRECL*SVQTRS
Trigger: GCTCCTTGTCTGGACTGACCACAGGCACTCACGAGG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGTATGCACAGGCTTTaGCCCAACAGCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRSMHRL*PNSWLP
Trigger: AGGCAGCCAGCTGTTGGGTCAAAGCCTGTGCATACT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCACCATCACTAGGTCCTaGACTGGGAGGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETTITRS*TGRLRG
Trigger: CCCCCGCAGCCTCCCAGTTCAGGACCTAGTGATGGT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAACCATCACTAGGTCCTaGACTGGGAGGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKTITRS*TGRLRG
Trigger: CCCCCGCAGCCTCCCAGTTCAGGACCTAGTGATGGT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGAGCATCTCCCGCCTaGAGTCGCGGACATGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIGASPA*SRGHAW
Trigger: CCAGGCATGTCCGCGACTTCAGGCGGGAGATGCTCC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGAACCCCTCTCTGGATaGTGTCCCGGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTEPLSG*CPGKLL
Trigger: CAGCAACTTCCCGGGACATCATCCAGAGAGGGGTTC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTGGTGCTGGATTTTaGAGGGCGGGGCAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSETGAGF*RAGQAA
Trigger: CGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCGTACCGGACGACGGTaGCTCCAGACTGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTRTGRR*LQTALP
Trigger: CGGCAAGGCAGTCTGGAGTCACCGTCGTCCGGTACG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCCTGATGTGAAAGAGTaGACCGATGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRPDVKE*TDAGLE
Trigger: CTCCAGCCCAGCATCGGTTCACTCTTTCACATCAGG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCGGCTGGGATGCTGTTTaGGCGCATCATGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAGWDAV*AHHAGP
Trigger: GGGCCCAGCATGATGCGCTCAAACAGCATCCCAGCC...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCGGCTGGGATGCTGTTTaGGCGCATCATGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETGWDAV*AHHAGP
Trigger: GGGCCCAGCATGATGCGCTCAAACAGCATCCCAGCC...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCTGGGTCAGGGCCCTTaGCAGGGTGCTTTTATACTG +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLGQGP*QGAFIL
Trigger: CAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTTGCTGCTGCTTCCTaGAGCAGGCACCCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELAAAS*SRHPRG
Trigger: CCCTCTAGGGTGCCTGCTGCAGGAAGCAGCAGCAAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCCCTGGACCTTGCTGCTaGTTCCTGCAGCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPPGPCC*FLQQAP
Trigger: GGGTGCCTGCTGCAGGAAGCAGCAGCAAGGTCCAGG...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTCCCTGGACCTTGCTaGTGCTTCCTGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELPGPC*CFLQQA
Trigger: TGCCTGCTGCAGGAAGCAGCAGCAAGGTCCAGGGAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCTTGTTCCAGCTTTCTaGCTAGATGGCGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLVPAF*LDGAPP
Trigger: AGGAGGGGCGCCATCTAGGCAGAAAGCTGGAACAAG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACCAGGAATGCCACTGGTaGTGGATTTTGAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDQECHW*WILKGG
Trigger: CCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTG...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCTCCTCGGCCAGGAATaGCACTGGTGCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGLLGQE*HWCWIL
Trigger: CAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGTGCAGAGGCAGATTTaGCACCTGCCTTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDVQRQI*HLPWHQ
Trigger: TTGGTGCCAAGGCAGGTGGCAAATCTGCCTCTGCAC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCAGCACTGCCCATGCTaGCCGTACCGGACGACGGTG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENQHCPC*PYRTTV
Trigger: CACCGTCGTCCGGTACGGGCAGCATGGGCAGTGCTG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCAGCACTGCCCATGCTaGCCGTACCGGACGACGGTG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTQHCPC*PYRTTV
Trigger: CACCGTCGTCCGGTACGGGCAGCATGGGCAGTGCTG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACACCAGCACTGCCCATaGTGCCCGTACCGGACGACG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIHQHCP*CPYRTT
Trigger: CGTCGTCCGGTACGGGCAGCATGGGCAGTGCTGGTG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGAGAGGGCTGCTGCTaGCGCTTAGCCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKREGCC*RLAHQH
Trigger: GTGCTGGTGGGCTAAGCGGCAGCAGCAGCCCTCTCT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTCTGGACCTCGTGAGTaGCTGTGGTCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDSGPRE*LWSVQT
Trigger: TGTCTGGACTGACCACAGGCACTCACGAGGTCCAGA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACAGAAAGATGGACCCTaGCTGGGGCGAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEQKDGP*LGRTAP
Trigger: AGGGGCTGTTCGCCCCAGGCAGGGTCCATCTTTCTG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTCCAGGTCATGGGGGTaGGTCGACTTGTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGSRSWG*VDLSSW
Trigger: CCAACTTGACAAGTCGACCCACCCCCATGACCTGGA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACACCAACCTCCAGGTCATaGGGGTGGGTCGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTPTSRS*GWVDLS
Trigger: TGACAAGTCGACCCACCCCCATGACCTGGAGGTTGG...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTCGCGGACATGCCTaGCCCAACCTCCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESRGHA*PNLQVM
Trigger: CATGACCTGGAGGTTGGGCCAGGCATGTCCGCGACT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGATGGCGCCCCTCCTTaGGCAGACATGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEDGAPP*ADMPLL
Trigger: GAGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGGCCAGGAATGCCACTaGTGCTGGATTTTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDGQECH*CWILKG
Trigger: GCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCAATACTGCTGGTACTaGATCTGTGGCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGQYCWY*ICGLLG
Trigger: GCCGAGGAGGCCACAGATCCAGTACCAGCAGTATTG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACACTCTCAGTTTCGAGGTaGTGGCCCCAGCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTLSVSR*WPQQTC
Trigger: GCAAGTCTGCTGGGGCCACCACCTCGAAACTGAGAG...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCGTGCACCACAGGCGCTaGCAGAGGTGGGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETVHHRR*QRWGWI
Trigger: AATCCAGCCCCACCTCTGCCAGCGCCTGTGGTGCAC...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGAACCGATGCTGGGCTaGAGGCCAACGAGTGACTTA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQREPMLG*RPTSDL
Trigger: TAAGTCACTCGTTGGCCTCCAGCCCAGCATCGGTTC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTGTGACCAGCACCGTGTaGCACAAAGGAGGTTGGACA +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGVTSTV*HKGGWT
Trigger: TGTCCAACCTCCTTTGTGCCACACGGTGCTGGTCAC...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCATGGATTTCTGTCCTaGGGGAGCAGTTTTGACCCC +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRHGFLS*GSSFDP
Trigger: GGGGTCAAAACTGCTCCCTCAGGACAGAAATCCATG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGAGGCGTGGTATACATaGACCTCGAGGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTEAWYT*TSRGLC
Trigger: ACACAGACCCCTCGAGGTTCATGTATACCACGCCTC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGACTCGAGCGCCCTaGCCCAATTTTAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRRTRAP*PNFSWF
Trigger: GAACCAACTAAAATTGGGTCAGGGCGCTCGAGTCCT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTGGATCCTGGCTGCCTaGGACCTTGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETWILAA*DLVHHR
Trigger: CCTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACCCACACGAGACCACCTaGTGTGAAAGAGTGAACCGA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDPHETT*CERVNR
Trigger: TCGGTTCACTCTTTCACATCAGGTGGTCTCGTGTGG...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACCAGACAAGGAGCCATaGTGGCTGAGGGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKPDKEP*WLRGRS
Trigger: TGACCTCCCCCTCAGCCATCATGGCTCCTTGTCTGG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTCCAGCTGCAGAAGATaGCATGGCAGAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGSSCRR*HGRRGN
Trigger: GTTTCCCCTTCTGCCATGTCATCTTCTGCAGCTGGA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGCTGGGATGCTGTTTaGGCGCATCATGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIGWDAV*AHHAGP
Trigger: GGGCCCAGCATGATGCGCTCAAACAGCATCCCAGCC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTATGAGCCCGAATGACTaGTGGCACGAGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGMSPND*WHEVFP
Trigger: AGGAAAGACCTCGTGCCATCAGTCATTCGGGCTCAT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCATGCTGTCTCTGAATaGGCCCGAATGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGHAVSE*ARMTDG
Trigger: GCCATCAGTCATTCGGGCTCATTCAGAGACAGCATG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCAAGGCTGGGCTCTCCTaGGGCAGAGTTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPKAGLS*GRVAEL
Trigger: GAGCTCAGCAACTCTGCCTCAGGAGAGCCCAGCCTT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAAGGCTGGGCTCTCCTaGGGCAGAGTTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKKAGLS*GRVAEL
Trigger: GAGCTCAGCAACTCTGCCTCAGGAGAGCCCAGCCTT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCCTGGACCTTGCTGCTaGTTCCTGCAGCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENPGPCC*FLQQAP
Trigger: GGGTGCCTGCTGCAGGAAGCAGCAGCAAGGTCCAGG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTGCCTGAGACCTTGTaGACCACAGGCGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLPETL*TTGAGR
Trigger: TCTGCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCCTGCCTGAGACCTTGTaGACCACAGGCGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPALPETL*TTGAGR
Trigger: TCTGCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAG...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGTACTTGGATCCTGGCTaGCTGAGACCTTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRYLDPG*LRPCAP
Trigger: TGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTA...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGACTCCAGACTGCCTTaGCGCGCTAATGTGGTACTA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDDSRLP*RANVVL
Trigger: TAGTACCACATTAGCGCGGCAAGGCAGTCTGGAGTC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTAGCCCACCAGCACTaGCCATGCTGCCCGTACCGG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLAHQH*PCCPYR
Trigger: CCGGTACGGGCAGCATGGGCAGTGCTGGTGGGCTAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGTGCCTGCAGAGGAACTaGTCATATTGGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRCLQRN*SYWQPT
Trigger: TGTGGGCTGCCAATATGAGCAGTTCCTCTGCAGGCA...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACCAGAGGTGACTGGTTaGCAGTGTCCTGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEPEVTG*QCPEAL
Trigger: GAGGGCTTCAGGACACTGGCAACCAGTCACCTCTGG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACCAGAGGTGACTGGTTaGCAGTGTCCTGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQPEVTG*QCPEAL
Trigger: GAGGGCTTCAGGACACTGGCAACCAGTCACCTCTGG...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTAGTCTTGGGCTGGGATaGTGTTTGAGCGCATCATGC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGSLGLG*CLSASC
Trigger: GCATGATGCGCTCAAACAGCATCCCAGCCCAAGACT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCACTGTCTGACTGGCTaGCCCCAGCAGGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENHCLTG*PQQAGG
Trigger: ACCTCCTGCCTGCTGGGGGCAGCCAGTCAGACAGTG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGGGTTTTGGCCTGGCTaGCTTCCGATGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKGFWPG*LPMEGK
Trigger: CTTCCCCTCCATCGGAAGCCAGCCAGGCCAAAACCC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCTGCTGGGTTTTGGCCTaGCTGGCTTCCGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPCWVLA*LASDGG
Trigger: CCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCA...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATGCTGGGTTTTGGCCTaGCTGGCTTCCGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKCWVLA*LASDGG
Trigger: CCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTGGTACTGGATCTGTaGCCTCCTCGGCCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELVLDL*PPRPGM
Trigger: CATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGGCGCTGGCAGAGGTaGGGCTGGATTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIRRWQR*GWIWGN
Trigger: GTTCCCCCAAATCCAGCCCCACCTCTGCCAGCGCCT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAGGCGCTGGCAGAGGTaGGGCTGGATTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTRRWQR*GWIWGN
Trigger: GTTCCCCCAAATCCAGCCCCACCTCTGCCAGCGCCT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGTGCACCACAGGCGCTaGCAGAGGTGGGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTVHHRR*QRWGWI
Trigger: AATCCAGCCCCACCTCTGCCAGCGCCTGTGGTGCAC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTGGATACTTGGATCCTaGCTGCCTGAGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGWILGS*LPETLC
Trigger: GCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTGGATACTTGGATCCTaGCTGCCTGAGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDWILGS*LPETLC
Trigger: GCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGACTCAGAGCTCGTGTaGAGGCTAGTCATGGACTGG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTDSELV*RLVMDW
Trigger: CCAGTCCATGACTAGCCTCCACACGAGCTCTGAGTC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTTCCTCCAGAGAAGTaGCACTCCCACAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGFPPEK*HSHKAG
Trigger: CCCAGCTTTGTGGGAGTGCCACTTCTCTGGAGGAAA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCAAGATGGACCCTGCCTaGGGCGAACAGCCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAKMDPA*GEQPLR
Trigger: TCTGAGGGGCTGTTCGCCCCAGGCAGGGTCCATCTT...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGACAGATCAGAAAGATaGACCCTGCCTGGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTDRSER*TLPGAN
Trigger: GTTCGCCCCAGGCAGGGTCCATCTTTCTGATCTGTC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCTCTCTGGCTGGCCTTaGCAGCATTTCCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLSGWP*QHFQTS
Trigger: ACTGGTTTGGAAATGCTGCCAAGGCCAGCCAGAGAG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATGGCTGCCTCAGTTTTaGGGCAACCCCAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEWLPQF*GNPKNR
Trigger: CCTGTTCTTGGGGTTGCCTCAAAACTGAGGCAGCCA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTTGTTGCAAGTCCTTaGTCAGCCGCTTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELVASP*SAACGL
Trigger: CAGGCCACAAGCGGCTGATCAAGGACTTGCAACAAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTGAGGGAGCAGTTTTaGCCCCTTCTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTLREQF*PLLRQV
Trigger: CACCTGTCTCAGAAGGGGTCAAAACTGCTCCCTCAG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTGCTGTGGCTTATCTaGGTCCCACGAAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVLWLI*VPRRLD
Trigger: GTCCAGTCTTCGTGGGACTCAGATAAGCCACAGCAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAGTGCTGTGGCTTATCTaGGTCCCACGAAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTVLWLI*VPRRLD
Trigger: GTCCAGTCTTCGTGGGACTCAGATAAGCCACAGCAC...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTATCAAGGGTGTCACTaGGACCACTGCTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGYQGCH*DHCSLN
Trigger: GTTCAGTGAGCAGTGGTCTCAGTGACACCCTTGATA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTGGTGATCATGGCAGATaGCCCTACTCCACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGGDHGR*PYSTWF
Trigger: AAACCAAGTGGAGTAGGGTCATCTGCCATGATCACC...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAACTGGTGCTGGATTTTaGAGGGCGGGGCAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKITGAGF*RAGQAA
Trigger: CGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCACTGGTGCTGGATTTTaGAGGGCGGGGCAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASTGAGF*RAGQAA
Trigger: CGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATGGATCCTGGCTGCCTaGGACCTTGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIWILAA*DLVHHR
Trigger: CCTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAGGCTCTGGACCTCGTaGGTGCCTGTGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTRLWTS*VPVVSP
Trigger: TGGACTGACCACAGGCACTCACGAGGTCCAGAGCCT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACACTACCCGTTCTCATaGGCAGGCTCTGGACCTCGT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKHYPFS*AGSGPR
Trigger: ACGAGGTCCAGAGCCTGCTCATGAGAACGGGTAGTG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCATTCAGTGCTCCCTaGATAGCCGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIPFSAP*IAAWAA
Trigger: TGCTGCCCAGGCGGCTATTCAGGGAGCACTGAATGG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGGGCTTCATGGATGCTaGGCCACAGTCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEGLHGC*ATVTSI
Trigger: AATGCTGGTGACTGTGGCTCAGCATCCATGAAGCCC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGTCAAGCACCCACTTTaGAGGATCTTCCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRVKHPL*RIFPWC
Trigger: ACACCATGGGAAGATCCTTCAAAGTGGGTGCTTGAC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAAGGCTGGGCTCTCCTaGGGCAGAGTTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTKAGLS*GRVAEL
Trigger: GAGCTCAGCAACTCTGCCTCAGGAGAGCCCAGCCTT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTGGGTCAGGGCCCTTaGCAGGGTGCTTTTATACTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELGQGP*QGAFIL
Trigger: CAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTCAACACAAACACTACTaGAGCCCTGTGACCAGCACC +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTQHKHY*SPVTST
Trigger: GGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTG...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACCTCCTCATCCAGATaGGCTGTCCCTTCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSETSSSR*AVPSRK
Trigger: TTTGCGGGAAGGGACAGCTCATCTGGATGAGGAGGT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGACCCAACAGCTGGCTaGCTCAGTTTTGAGGCAACC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEDPTAG*LSFEAT
Trigger: GGTTGCCTCAAAACTGAGGCAGCCAGCTGTTGGGTC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTGCTGCGCCAGGGCTTaGTGGCACTTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVECCARA*WHLEKG
Trigger: TCCCTTCTCCAAGTGCCAGCAAGCCCTGGCGCAGCA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGCTGCGCCAGGGCTTaGTGGCACTTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCCARA*WHLEKG
Trigger: TCCCTTCTCCAAGTGCCAGCAAGCCCTGGCGCAGCA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACATTCATGGACTTGCTaGGCCAGGGCTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKHSWTC*ARACWH
Trigger: GTGCCAGCAAGCCCTGGCGCAGCAAGTCCATGAATG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACATGTTGTCTCCAGGGTaGTGTGGCTTATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDMLSPG*CGLSES
Trigger: GGACTCAGATAAGCCACAGCACCCTGGAGACAACAT...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCTGAAGTCGCGGACATaGCTGGCCCAACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLKSRT*LAQPPG
Trigger: ACCTGGAGGTTGGGCCAGGCATGTCCGCGACTTCAG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAACACAGTCTTCCACTTaGCACCAGCATCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQTQSST*HQHPHG
Trigger: GCCATGGGGATGCTGGTGGCAAGTGGAAGACTGTGT...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTCCTCGGCCAGGAATaGCACTGGTGCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELLGQE*HWCWIL
Trigger: CAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTAGAGAGGGCTGCTGCTaGCGCTTAGCCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFREGCC*RLAHQH
Trigger: GTGCTGGTGGGCTAAGCGGCAGCAGCAGCCCTCTCT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTCTGGACCATTCAGTaGTCCCTGAATAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVWTIQ*SLNSRL
Trigger: CAGGCGGCTATTCAGGGAGCACTGAATGGTCCAGAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGGGCCCTTGACAGGGTaGTTTTATACTGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTGPLTG*FYTGSG
Trigger: ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCAGAAAGATGGACCCTaGCTGGGGCGAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTQKDGP*LGRTAP
Trigger: AGGGGCTGTTCGCCCCAGGCAGGGTCCATCTTTCTG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGACTGACGCCCAGCCCTaGACAAGCCTCTTACATTTT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRTDAQP*TSLLHF
Trigger: AAAATGTAAGAGGCTTGTGCAGGGCTGGGCGTCAGT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCACATTTCCCTCTGTTaGTTCTGTGTCCCGAAACGC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGHISLC*FCVPKR
Trigger: GCGTTTCGGGACACAGAAGCAACAGAGGGAAATGTG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGCGCCAGGGCTTGCTaGCACTTGGAGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCARAC*HLEKGW
Trigger: CCATCCCTTCTCCAAGTGCCAGCAAGCCCTGGCGCA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCCCAACCTCCAGGTCATaGGGGTGGGTCGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAPTSRS*GWVDLS
Trigger: TGACAAGTCGACCCACCCCCATGACCTGGAGGTTGG...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGTCGCGGACATGCCTaGCCCAACCTCCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSRGHA*PNLQVM
Trigger: CATGACCTGGAGGTTGGGCCAGGCATGTCCGCGACT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTCTCGAGGGGTCTGTGTaGATGAATCGACTGGTACCA +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTLEGSV*MNRLVP
Trigger: TGGTACCAGTCGATTCATCCACACAGACCCCTCGAG...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGAATGCCACTGGTGCTaGATTTTGAAGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEECHWC*ILKGGA
Trigger: TGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGAATGCCACTGGTGCTaGATTTTGAAGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQECHWC*ILKGGA
Trigger: TGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAGGCCAGGAATGCCACTaGTGCTGGATTTTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTGQECH*CWILKG
Trigger: GCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCC...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACAATACTGCTGGTACTaGATCTGTGGCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEQYCWY*ICGLLG
Trigger: GCCGAGGAGGCCACAGATCCAGTACCAGCAGTATTG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTCTCAGTTTCGAGGTaGTGGCCCCAGCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLSVSR*WPQQTC
Trigger: GCAAGTCTGCTGGGGCCACCACCTCGAAACTGAGAG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGACTCAGAGCTCGTGTaGAGGCTAGTCATGGACTGG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEDSELV*RLVMDW
Trigger: CCAGTCCATGACTAGCCTCCACACGAGCTCTGAGTC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGACAGATCAGAAAGATaGACCCTGCCTGGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQDRSER*TLPGAN
Trigger: GTTCGCCCCAGGCAGGGTCCATCTTTCTGATCTGTC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGTATGCACAGGCTTTaGCCCAACAGCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSMHRL*PNSWLP
Trigger: AGGCAGCCAGCTGTTGGGTCAAAGCCTGTGCATACT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTTGTTGCAAGTCCTTaGTCAGCCGCTTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLVASP*SAACGL
Trigger: CAGGCCACAAGCGGCTGATCAAGGACTTGCAACAAG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGGTGGCACTGTGTTTaGCATTCATGGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTRWHCV*HSWTCC
Trigger: GCAGCAAGTCCATGAATGTCAAACACAGTGCCACCT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATGGCTTCAGTCTGTCTaGAGATGGTGTGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKWLQSV*RWCGGG
Trigger: ACCTCCCCCACACCATCTTCAGACAGACTGAAGCCA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGTGCCCTGTAAATaGATGGTGCCACTGTCGCGG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSENVPCK*MVPLSR
Trigger: CCGCGACAGTGGCACCATTCATTTACAGGGCACATT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTGCTGTGGCTTATCTaGGTCCCACGAAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKVLWLI*VPRRLD
Trigger: GTCCAGTCTTCGTGGGACTCAGATAAGCCACAGCAC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGAGGCGTGGTATACATaGACCTCGAGGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKEAWYT*TSRGLC
Trigger: ACACAGACCCCTCGAGGTTCATGTATACCACGCCTC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGAACCCCTCTCTGGATaGTGTCCCGGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTEPLSG*CPGKLL
Trigger: CAGCAACTTCCCGGGACATCATCCAGAGAGGGGTTC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTGTTGGAGTAAGAGCTaGCAGAGGATGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDCWSKS*QRMWCS
Trigger: TGAACACCACATCCTCTGTCAGCTCTTACTCCAACA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTTTTCCCGGGTGTTTTaGGTGCACTTGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDFSRVF*VHLFQL
Trigger: AAGCTGGAACAAGTGCACTCAAAACACCCGGGAAAA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTGCTCCACTGCTGGTaGTCATGGCAGATGACCCTA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELLHCW*SWQMTL
Trigger: TAGGGTCATCTGCCATGATCACCAGCAGTGGAGCAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTTTCTCCCTGCATTTaGCTTCCCGCCAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEFSPCI*LPANGS
Trigger: GCTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGGATCCTGGCTGCCTaGGACCTTGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPWILAA*DLVHHR
Trigger: CCTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAAGGGCTGGGCATTACTaGGGAAGATTTCACACCCTC +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQRAGHY*GRFHTL
Trigger: GAGGGTGTGAAATCTTCCTCAGTAATGCCCAGCCCT...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCCCTGATGTGAAAGAGTaGACCGATGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPPDVKE*TDAGLE
Trigger: CTCCAGCCCAGCATCGGTTCACTCTTTCACATCAGG...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACGAGACCACCTGATGTaGAAGAGTGAACCGATGCTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSERDHLM*KSEPML
Trigger: CAGCATCGGTTCACTCTTTCACATCAGGTGGTCTCG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACCACACGAGACCACCTaGTGTGAAAGAGTGAACCGA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEPHETT*CERVNR
Trigger: TCGGTTCACTCTTTCACATCAGGTGGTCTCGTGTGG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGGCTGGGATGCTGTTTaGGCGCATCATGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFGWDAV*AHHAGP
Trigger: GGGCCCAGCATGATGCGCTCAAACAGCATCCCAGCC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATGAGCCCGAATGACTaGTGGCACGAGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEMSPND*WHEVFP
Trigger: AGGAAAGACCTCGTGCCATCAGTCATTCGGGCTCAT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACATGCTGTCTCTGAATaGGCCCGAATGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEHAVSE*ARMTDG
Trigger: GCCATCAGTCATTCGGGCTCATTCAGAGACAGCATG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTAGCAACTTTTTCTTGTaGTGCAACCAGCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGSNFFL*CNQLSP
Trigger: CGGAGAGAGCTGGTTGCATCACAAGAAAAAGTTGCT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGCAACTTTTTCTTGTaGTGCAACCAGCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRSNFFL*CNQLSP
Trigger: CGGAGAGAGCTGGTTGCATCACAAGAAAAAGTTGCT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCATTCAGTGCTCCCTaGATAGCCGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFPFSAP*IAAWAA
Trigger: TGCTGCCCAGGCGGCTATTCAGGGAGCACTGAATGG...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGGGCTTCATGGATGCTaGGCCACAGTCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKGLHGC*ATVTSI
Trigger: AATGCTGGTGACTGTGGCTCAGCATCCATGAAGCCC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGTCAAGCACCCACTTTaGAGGATCTTCCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTVKHPL*RIFPWC
Trigger: ACACCATGGGAAGATCCTTCAAAGTGGGTGCTTGAC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTAAGGCTGGGCTCTCCTaGGGCAGAGTTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFKAGLS*GRVAEL
Trigger: GAGCTCAGCAACTCTGCCTCAGGAGAGCCCAGCCTT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTCTTCTGGTCGCAGCTaGAGTAAGGCTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSSGRS*SKAGLS
Trigger: GGAGAGCCCAGCCTTACTTCAGCTGCGACCAGAAGA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCCTGGGTCAGGGCCCTTaGCAGGGTGCTTTTATACTG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETLGQGP*QGAFIL
Trigger: CAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAG...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGACTACTGAAGCCCTGTaGCCAGCACCGTGTGGCACA +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVETTEAL*PAPCGT
Trigger: TGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGT...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACAGCAGGCCGCTGCATaGTTCTTCCAGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIQQAAA*FFQWLL
Trigger: AAGGAGCCACTGGAAGAATCATGCAGCGGCCTGCTG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCAGGAGGTTCCAGGCTaGGCTGCTGGTGTGATACAG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTQEVPG*AAGVIQ
Trigger: CTGTATCACACCAGCAGCTCAGCCTGGAACCTCCTG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTGGACTGCATATCTTaGTGGGTTTTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELDCIS*WVLAWL
Trigger: CAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCCTTGCTGCTGCTTCCTaGAGCAGGCACCCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPLAAAS*SRHPRG
Trigger: CCCTCTAGGGTGCCTGCTGCAGGAAGCAGCAGCAAG...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACATTCATGGACTTGCTaGGCCAGGGCTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIHSWTC*ARACWH
Trigger: GTGCCAGCAAGCCCTGGCGCAGCAAGTCCATGAATG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTGTGACACTTTGGGACTaGTATTTGTTGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGVTLWD*YLLSHH
Trigger: GTGGTGGCTCAACAAATAGCAGTCCCAAAGTGTCAC...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTGCCCACTGCTTTGTaGCACTGTCATGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELPTAL*HCHGTG
Trigger: TCCTGTACCATGACAGTGGCACAAAGCAGTGGGCAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCGACTGGTACCACTaGGAGGATAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKIDWYH*EDSQHP
Trigger: TGGGTGCTGGCTATCCTCGCAGTGGTACCAGTCGAT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGGAAGCTTTCTGCCCTaGCTTCTCGGGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENGSFLP*LLGVFR
Trigger: CCTGAAGACCCCGAGAAGGCAGGGCAGAAAGCTTCC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGACAGGGAAGCTTTCTaGCCTGCCTTCTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTDREAF*PAFSGS
Trigger: AGACCCCGAGAAGGCAGGGCAGAAAGCTTCCCTGTC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGGACAGGGAAGCTTTCTaGCCTGCCTTCTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVEDREAF*PAFSGS
Trigger: AGACCCCGAGAAGGCAGGGCAGAAAGCTTCCCTGTC...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCCAGGAATGCCACTGGTaGTGGATTTTGAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPQECHW*WILKGG
Trigger: CCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTG...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCGTTGGAATCAATACTaGTGGTACTGGATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGRWNQY*WYWICG
Trigger: GCCACAGATCCAGTACCAGCAGTATTGATTCCAACG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAGACTCCAGACTGCCTTaGCGCGCTAATGTGGTACTA +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTDSRLP*RANVVL
Trigger: TAGTACCACATTAGCGCGGCAAGGCAGTCTGGAGTC...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAACGGTGACTCCAGACTaGCTTGCCGCGCTAATGTGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKITVTPD*LAALMW
Trigger: CCACATTAGCGCGGCAAGGCAGTCTGGAGTCACCGT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTTAGCCCACCAGCACTaGCCATGCTGCCCGTACCGG +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFALAHQH*PCCPYR
Trigger: CCGGTACGGGCAGCATGGGCAGTGCTGGTGGGCTAA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGAAAGAGTGAACCGATaGTGGGCTGGAGGCCAACGA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKERVNR*WAGGQR
Trigger: TCGTTGGCCTCCAGCCCAGCATCGGTTCACTCTTTC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACATGCCTGCAGAGGAACTaGTCATATTGGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTCLQRN*SYWQPT
Trigger: TGTGGGCTGCCAATATGAGCAGTTCCTCTGCAGGCA...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATCGGAGTATCCTTGCTaGCTGCAGAGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESEYPC*LQRNCS
Trigger: TGAGCAGTTCCTCTGCAGGCAGCAAGGATACTCCGA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATCTGGACCTCGTGAGTaGCTGTGGTCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSGPRE*LWSVQT
Trigger: TGTCTGGACTGACCACAGGCACTCACGAGGTCCAGA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTCTGGACCATTCAGTaGTCCCTGAATAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKVWTIQ*SLNSRL
Trigger: CAGGCGGCTATTCAGGGAGCACTGAATGGTCCAGAC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTTCATGGTGGCTGGTaGTTTCGCTGTCGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTLHGGW*FRCRSF
Trigger: AAAGCTGCGACAGCGAAAGCACCAGCCACCATGAAG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACAAACCAGTTGGAAATaGGCACCGTGGGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQQTSWK*APWVSS
Trigger: AGAGGAGACCCACGGTGCGCATTTCCAACTGGTTTG...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCTGGCTGGCTTCCGATaGAGGGGAAGCGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLAGFR*RGSVSN
Trigger: GTTACTCACGCTTCCCCTCCATCGGAAGCCAGCCAG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATATCTTGCTGGGTTTTaGCCTGGCTGGCTTCCGATG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEYLAGF*PGWLPM
Trigger: CATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGCTGCCCAGCAGTACTaGGAGGCTGCACGTTACCAT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTAAQQY*EAARYH
Trigger: ATGGTAACGTGCAGCCTCCCAGTACTGCTGGGCAGC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGGCTTAGATAAGGACTaGGAAGGGCTCCCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEGLDKD*EGLPLV
Trigger: TACCAAGGGGAGCCCTTCCCAGTCCTTATCTAAGCC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCCAACCTCCAGGTCATaGGGGTGGGTCGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENPTSRS*GWVDLS
Trigger: TGACAAGTCGACCCACCCCCATGACCTGGAGGTTGG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTCGAGGGGTCTGTGTaGATGAATCGACTGGTACCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELEGSV*MNRLVP
Trigger: TGGTACCAGTCGATTCATCCACACAGACCCCTCGAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGCCAAAGGAGCTGGTaGCAGTCGATCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESQRSW*QSIFQC
Trigger: GCATTGGAAGATCGACTGCCACCAGCTCCTTTGGCT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGAATGCCACTGGTGCTaGATTTTGAAGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKECHWC*ILKGGA
Trigger: TGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGGCCAGGAATGCCACTaGTGCTGGATTTTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKGQECH*CWILKG
Trigger: GCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTGGTACTGGATCTGTaGCCTCCTCGGCCAGGAATG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLVLDL*PPRPGM
Trigger: CATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCAGTTTCGAGGTGGTaGCCCCAGCAGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISVSRW*PQQTCC
Trigger: GCAGCAAGTCTGCTGGGGCCACCACCTCGAAACTGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGAGTGAACCGATGCTaGGCTGGAGGCCAACGAGTG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRVNRC*AGGQRV
Trigger: CACTCGTTGGCCTCCAGCCCAGCATCGGTTCACTCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCCTCGTGAGTGCCTGTaGTCAGTCCAGACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENPRECL*SVQTRS
Trigger: GCTCCTTGTCTGGACTGACCACAGGCACTCACGAGG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATGCCCTCTTCTTGGTTaGCCTGCCGAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKICPLLG*PAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACACTGCAGAAGATGACATaGCAGAAGGGGAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTLQKMT*QKGKPE
Trigger: CTCTGGTTTCCCCTTCTGCCATGTCATCTTCTGCAG...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACAGTCACCAGCATTATaGGGTAACTTGGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEQSPAL*GNLGDA
Trigger: GGCATCCCCCAAGTTACCCCATAATGCTGGTGACTG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACAGTCACCAGCATTATaGGGTAACTTGGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTQSPAL*GNLGDA
Trigger: GGCATCCCCCAAGTTACCCCATAATGCTGGTGACTG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCTGTCTTCATGGTGGCTaGTGCTTTCGCTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPACLHGG*CFRCRS
Trigger: GCTGCGACAGCGAAAGCACCAGCCACCATGAAGACA...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAAGATGGACCCTGCCTaGGGCGAACAGCCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPKMDPA*GEQPLR
Trigger: TCTGAGGGGCTGTTCGCCCCAGGCAGGGTCCATCTT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTGGAAATGCGCACCGTaGGTCTCCTCTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVEWKCAP*VSSPHH
Trigger: GTGATGGGGAGAGGAGACCCACGGTGCGCATTTCCA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTTTTGACCCCTTCTaGGACAGGTGGCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESFDPF*DRWLQS
Trigger: AGACTGAAGCCACCTGTCTCAGAAGGGGTCAAAACT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCTGAGGGAGCAGTTTTaGCCCCTTCTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLREQF*PLLRQV
Trigger: CACCTGTCTCAGAAGGGGTCAAAACTGCTCCCTCAG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGGGTCTGTGTGGATaGATCGACTGGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRGLCG*IDWYHC
Trigger: GCAGTGGTACCAGTCGATTCATCCACACAGACCCCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGAGACCACTGCTCACTaGACTGCTGTCATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIETTAH*TAVIPA
Trigger: AGCTGGGATGACAGCAGTTCAGTGAGCAGTGGTCTC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGAATCTGTCCTCAGCTaGGTATTCTTCCTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEESVLS*VFFLEG
Trigger: CCCCTCTAGGAAGAATACTCAGCTGAGGACAGATTC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGGTGATCATGGCAGATaGCCCTACTCCACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEGDHGR*PYSTWF
Trigger: AAACCAAGTGGAGTAGGGTCATCTGCCATGATCACC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATTGCTCCACTGCTGGTaGTCATGGCAGATGACCCTA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLLHCW*SWQMTL
Trigger: TAGGGTCATCTGCCATGATCACCAGCAGTGGAGCAA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATTTTCTCCCTGCATTTaGCTTCCCGCCAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKFSPCI*LPANGS
Trigger: GCTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGGGCTGGGCATTACTaGGGAAGATTTCACACCCTC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKRAGHY*GRFHTL
Trigger: GAGGGTGTGAAATCTTCCTCAGTAATGCCCAGCCCT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGTCTGAGGGTTTATTaGAGAGAGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSLRVY*REGCCC
Trigger: GCAGCAGCAGCCCTCTCTTCAATAAACCCTCAGACT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGATGTGAAAGAGTaGACCGATGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIPDVKE*TDAGLE
Trigger: CTCCAGCCCAGCATCGGTTCACTCTTTCACATCAGG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCCGAGACCACCTGATGTaGAAGAGTGAACCGATGCTG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETRDHLM*KSEPML
Trigger: CAGCATCGGTTCACTCTTTCACATCAGGTGGTCTCG...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGCCCTCCAGTAGAATaGGAACGCAACCACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESPPVE*ERNHSL
Trigger: CAAAGAGTGGTTGCGTTCTCATTCTACTGGAGGGCT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGCATTTGCTGAAAGCTaGGATGTGAGGGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTAFAES*DVRVAT
Trigger: AGTTGCTACCCTCACATCTCAGCTTTCAGCAAATGC...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCCATTCAGTGCTCCCTaGATAGCCGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFAPFSAP*IAAWAA
Trigger: TGCTGCCCAGGCGGCTATTCAGGGAGCACTGAATGG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTTAATTCCTTTTCTCTaGGCTCGCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDLIPFL*ARSSAA
Trigger: TGCAGCTGAAGAGCGAGCTCAGAGAAAAGGAATTAA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGACCCACCTGAAATTGTaGTGCAGCTCTAGATTTGGT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRTHLKL*CSSRFG
Trigger: ACCAAATCTAGAGCTGCATCACAATTTCAGGTGGGT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACATTGCGGAATGTGCTTTaGGGTTGTGGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTLRNVL*GCGFLS
Trigger: ACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAA...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACAACACAAACACTACTaGAGCCCTGTGACCAGCACC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKQHKHY*SPVTST
Trigger: GGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGTTGTTCTATAGCAACTaGCCCATTGGTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLFYSN*PIGGHR
Trigger: TCTGTGACCACCAATGGGTCAGTTGCTATAGAACAA...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGATTTGATCCATGTTTaGGGCTTCAAAGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDDLIHV*GFKVRV
Trigger: CACCCTGACTTTGAAGCCTCAAACATGGATCAAATC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACATCACCAGCCCTTAACTaGCCTAGGTCTGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTSPALN*PRSVTL
Trigger: AAGGGTTACAGACCTAGGTCAGTTAAGGGCTGGTGA...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACAGAGACTTTTGTTTCTaGAGGCAAGCTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDRDFCF*RQAPFL
Trigger: GAGAAAGGGAGCTTGCCTTCAGAAACAAAAGTCTCT...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGCTGCCAGACTGGACTaGATATCTTGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEAARLD*ISCWVL
Trigger: CAAAACCCAGCAAGATATGCAGTCCAGTCTGGCAGC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTGTGCTCTGCCCACTaGTTTGTGCCACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILCSAH*FVPLSW
Trigger: CCATGACAGTGGCACAAAGCAGTGGGCAGAGCACAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTGTGCTCTGCCCACTaGTTTGTGCCACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLCSAH*FVPLSW
Trigger: CCATGACAGTGGCACAAAGCAGTGGGCAGAGCACAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACAGCACCATTTCCTGTaGTCTGCCCACTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKQHHFL*SAHCFV
Trigger: CACAAAGCAGTGGGCAGAGCACAGGAAATGGTGCTG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATGTTGTCTCCAGGGTaGTGTGGCTTATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEMLSPG*CGLSES
Trigger: GGACTCAGATAAGCCACAGCACCCTGGAGACAACAT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCGTCATCCCAGCTGTCTaGATCCACTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAVIPAV*IHCHIV
Trigger: CACGATGTGACAGTGGATGCAGACAGCTGGGATGAC...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTCATCCCAGCTGTCTaGATCCACTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKVIPAV*IHCHIV
Trigger: CACGATGTGACAGTGGATGCAGACAGCTGGGATGAC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACACAGTCTTCCACTTaGCACCAGCATCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENTQSST*HQHPHG
Trigger: GCCATGGGGATGCTGGTGGCAAGTGGAAGACTGTGT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTTGTTCCAGCTTTCTaGCTAGATGGCGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILVPAF*LDGAPP
Trigger: AGGAGGGGCGCCATCTAGGCAGAAAGCTGGAACAAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACCCGGGTGTTTTGAGTaGACTTGTTCCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEPGCFE*TCSSFL
Trigger: CAGAAAGCTGGAACAAGTGCACTCAAAACACCCGGG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCAGGAATGCCACTGGTaGTGGATTTTGAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENQECHW*WILKGG
Trigger: CCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGCTCCTCGGCCAGGAATaGCACTGGTGCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVELLGQE*HWCWIL
Trigger: CAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAG...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTCCTCGGCCAGGAATaGCACTGGTGCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILLGQE*HWCWIL
Trigger: CAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATACTTGGATCCTGGCTaGCTGAGACCTTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKYLDPG*LRPCAP
Trigger: TGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGTGCAGAGGCAGATTTaGCACCTGCCTTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTVQRQI*HLPWHQ
Trigger: TTGGTGCCAAGGCAGGTGGCAAATCTGCCTCTGCAC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATCGGAGTATCCTTGCTaGCTGCAGAGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSEYPC*LQRNCS
Trigger: TGAGCAGTTCCTCTGCAGGCAGCAAGGATACTCCGA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGCTCGGAGTATCCTTaGTGCCTGCAGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISSEYP*CLQRNC
Trigger: GCAGTTCCTCTGCAGGCAGCAAGGATACTCCGAGCT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTCTGGACCTCGTGAGTaGCTGTGGTCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSGPRE*LWSVQT
Trigger: TGTCTGGACTGACCACAGGCACTCACGAGGTCCAGA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACATCTTCTTGGTTGGCCTaGCGAGATGATGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTSSWLA*RDDGVY
Trigger: ATATACCCCATCATCTCGGCAGGCCAACCAAGAAGA...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGTCTTGGGCTGGGATaGTGTTTGAGCGCATCATGC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSLGLG*CLSASC
Trigger: GCATGATGCGCTCAAACAGCATCCCAGCCCAAGACT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCAGTCTTGGGCTGGGATaGTGTTTGAGCGCATCATGC +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETSLGLG*CLSASC
Trigger: GCATGATGCGCTCAAACAGCATCCCAGCCCAAGACT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTAAGATGAAGAGGAGGTaGTGCTTGAGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTKMKRR*CLRILT
Trigger: CGTCAGAATCCTCAAGCAGCACCTCCTCTTCATCTT...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAAGATGAAGAGGAGGTaGTGCTTGAGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTKMKRR*CLRILT
Trigger: CGTCAGAATCCTCAAGCAGCACCTCCTCTTCATCTT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTAGATTTTTGGTCCTTTaGTCGACCATAGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGRFLVL*STIALA
Trigger: AGCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACAGATTTTTGGTCCTTTaGTCGACCATAGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDRFLVL*STIALA
Trigger: AGCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCT...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACATCAGTTTGCGGAATGTaGTTTGAGGTTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTSVCGM*FEVVAS
Trigger: GGAAGCCACAACCTCAAAGCACATTCCGCAAACTGA...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTTCAGTTTGCGGAATGTaGTTTGAGGTTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTSVCGM*FEVVAS
Trigger: GGAAGCCACAACCTCAAAGCACATTCCGCAAACTGA...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGGTTCCAGGCTGAGCTaGTGGTGTGATACAGGGACT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASGSRLS*WCDTGT
Trigger: AGTCCCTGTATCACACCAGCAGCTCAGCCTGGAACC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCTATCTTGCTGGGTTTTaGCCTGGCTGGCTTCCGATG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPYLAGF*PGWLPM
Trigger: CATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATA...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCATCTGGCTGCCAGACTaGACTGCATATCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPIWLPD*TAYLAG
Trigger: CCCAGCAAGATATGCAGTCCAGTCTGGCAGCCAGAT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTTTAGAGCCTGGTTTTaGAATACCACTGGAAGACGG +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDFRAWF*NTTGRR
Trigger: CCGTCTTCCAGTGGTATTCCAAAACCAGGCTCTAAA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTCCAGGTCATGGGGGTaGGTCGACTTGTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSRSWG*VDLSSW
Trigger: CCAACTTGACAAGTCGACCCACCCCCATGACCTGGA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCCTCGAGGGGTCTGTGTaGATGAATCGACTGGTACCA +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPLEGSV*MNRLVP
Trigger: TGGTACCAGTCGATTCATCCACACAGACCCCTCGAG...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGGCCAGGAATGCCACTaGTGCTGGATTTTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTGQECH*CWILKG
Trigger: GCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCAATACTGCTGGTACTaGATCTGTGGCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTQYCWY*ICGLLG
Trigger: GCCGAGGAGGCCACAGATCCAGTACCAGCAGTATTG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACATGGAATCAATACTGCTaGTACTGGATCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTWNQYC*YWICGL
Trigger: GAGGCCACAGATCCAGTACCAGCAGTATTGATTCCA...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTCAGTTTCGAGGTGGTaGCCCCAGCAGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSVSRW*PQQTCC
Trigger: GCAGCAAGTCTGCTGGGGCCACCACCTCGAAACTGA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATGGATACTTGGATCCTaGCTGCCTGAGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKWILGS*LPETLC
Trigger: GCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAATTTGCCACCTGCCTTaGCACCAAACAACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTICHLP*HQTTFE
Trigger: TTCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAAT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGAACCGATGCTGGGCTaGAGGCCAACGAGTGACTTA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENEPMLG*RPTSDL
Trigger: TAAGTCACTCGTTGGCCTCCAGCCCAGCATCGGTTC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGGAACTGCTCATATTaGCAGCCCACACGAGACCAC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKRNCSY*QPTRDH
Trigger: GTGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTTGCCCTCTTCTTGGTTaGCCTGCCGAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGCPLLG*PAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCA...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTGCCCTCTTCTTGGTTaGCCTGCCGAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFCPLLG*PAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCTTTCCTCCAGAGAAGTaGCACTCCCACAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPFPPEK*HSHKAG
Trigger: CCCAGCTTTGTGGGAGTGCCACTTCTCTGGAGGAAA...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATTTGGGAGGATGGTCTaGACCATTCAGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKFGRMV*TIQCSL
Trigger: CAGGGAGCACTGAATGGTCCAGACCATCCTCCCAAA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGTGATGAAGGAGGCTTaGTGGACTTTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRVMKEA*WTFSSQ
Trigger: TTGGGAAGAAAAAGTCCACCAAGCCTCCTTCATCAC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATCTGCATCCGGTTCATaGCTTCCCGGATCTGATCAA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESASGS*LPGSDQ
Trigger: TTGATCAGATCCGGGAAGCCATGAACCGGATGCAGA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTCCTAATGACTGCCTaGAAGATGAAGAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVLMTA*KMKRRC
Trigger: GCACCTCCTCTTCATCTTCCAGGCAGTCATTAGGAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGTCTTCATGGTGGCTaGTGCTTTCGCTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCLHGG*CFRCRS
Trigger: GCTGCGACAGCGAAAGCACCAGCCACCATGAAGACA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTGTCTTCATGGTGGCTaGTGCTTTCGCTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASCLHGG*CFRCRS
Trigger: GCTGCGACAGCGAAAGCACCAGCCACCATGAAGACA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTGGCACAAAGGAGGTTaGACAGATCAGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGWHKGG*TDQKDG
Trigger: TCCATCTTTCTGATCTGTCCAACCTCCTTTGTGCCA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCGGAGGACTGGCCTCTTaGATTTGTTCTGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAGGLAS*ICSGMG
Trigger: CCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCC...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGTGCTTATGGAGGACTaGCCTCTTGGATTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTVLMED*PLGFVL
Trigger: CAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCTCTTCACTGTCTGACTaGCTGCCCCCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVASSLSD*LPPAGR
Trigger: CCTGCCTGCTGGGGGCAGCCAGTCAGACAGTGAAGA...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTTGGCTGCCTCAGTTTTaGGGCAACCCCAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGWLPQF*GNPKNR
Trigger: CCTGTTCTTGGGGTTGCCTCAAAACTGAGGCAGCCA...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCATGGATTTCTGTCCTaGGGGAGCAGTTTTGACCCC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENHGFLS*GSSFDP
Trigger: GGGGTCAAAACTGCTCCCTCAGGACAGAAATCCATG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTATGTTGCTGCTGTTaGGGGAGTTGGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLCCCC*GSWTAP
Trigger: TGGTGCTGTCCAACTCCCTCAACAGCAGCAACATAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTCCACTGTCACATCGTaGACCCCTCTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSTVTS*TPLWMM
Trigger: CATCATCCAGAGAGGGGTTCACGATGTGACAGTGGA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGAGACCACTGCTCACTaGACTGCTGTCATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFETTAH*TAVIPA
Trigger: AGCTGGGATGACAGCAGTTCAGTGAGCAGTGGTCTC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATGTTGGAGTAAGAGCTaGCAGAGGATGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSECWSKS*QRMWCS
Trigger: TGAACACCACATCCTCTGTCAGCTCTTACTCCAACA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGGTGGAGCGTTTCTCTaGATCTGTCCTCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTGGAFL*ICPQLS
Trigger: ACTCAGCTGAGGACAGATTCAGAGAAACGCTCCACC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTTTCCCGGGTGTTTTaGGTGCACTTGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEFSRVF*VHLFQL
Trigger: AAGCTGGAACAAGTGCACTCAAAACACCCGGGAAAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTGCTCCACTGCTGGTaGTCATGGCAGATGACCCTA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLLHCW*SWQMTL
Trigger: TAGGGTCATCTGCCATGATCACCAGCAGTGGAGCAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGACTCGAGCGCCCTaGCCCAATTTTAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRTRAP*PNFSWF
Trigger: GAACCAACTAAAATTGGGTCAGGGCGCTCGAGTCCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAGTCTGAGGGTTTATTaGAGAGAGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSLRVY*REGCCC
Trigger: GCAGCAGCAGCCCTCTCTTCAATAAACCCTCAGACT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCCAGACAAGGAGCCATaGTGGCTGAGGGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLPDKEP*WLRGRS
Trigger: TGACCTCCCCCTCAGCCATCATGGCTCCTTGTCTGG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCACTACCCGTTCTCATaGGCAGGCTCTGGACCTCGT +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFAHYPFS*AGSGPR
Trigger: ACGAGGTCCAGAGCCTGCTCATGAGAACGGGTAGTG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTCCAGCTGCAGAAGATaGCATGGCAGAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSSCRR*HGRRGN
Trigger: GTTTCCCCTTCTGCCATGTCATCTTCTGCAGCTGGA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTCCAGCTGCAGAAGATaGCATGGCAGAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVESSCRR*HGRRGN
Trigger: GTTTCCCCTTCTGCCATGTCATCTTCTGCAGCTGGA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACATGCTGTCTCTGAATaGGCCCGAATGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIHAVSE*ARMTDG
Trigger: GCCATCAGTCATTCGGGCTCATTCAGAGACAGCATG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGATAATGAAGAGCCATaGACTTCTTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRDNEEP*TSSMLS
Trigger: AGACAGCATGGAAGAAGTTCATGGCTCTTCATTATC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAAGGAATGCTGTCTTCTaGTGCGAAGATCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQRNAVF*CEDLWE
Trigger: CTCCCAAAGATCTTCGCATCAGAAGACAGCATTCCT...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGGATGCCGGAAGGGATaGATCAGTAAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEGCRKG*ISKLFN
Trigger: ATTGAAGAGCTTACTGATTCATCCCTTCCGGCATCC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGTACCACTCGGTCCTaGGAGTATAATTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTSTTRS*EYNSVM
Trigger: CATCACAGAATTATACTCTCAGGACCGAGTGGTACT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCACATAATACCCACCTaGAATTGTGATGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRHIIPT*NCDAAL
Trigger: TAGAGCTGCATCACAATTTCAGGTGGGTATTATGTG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACCACATAATACCCACCTaGAATTGTGATGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDHIIPT*NCDAAL
Trigger: TAGAGCTGCATCACAATTTCAGGTGGGTATTATGTG...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTGGGGTATATCTTTCTaGGAGAGTAGATCTCACACT +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGWGISF*ESRSHT
Trigger: AGTGTGAGATCTACTCTCTCAGAAAGATATACCCCA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGAGAAACTTGGACAGTaGGCGCCGCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIEKLGQ*APLCIV
Trigger: AACTATGCAGAGCGGCGCTCACTGTCCAAGTTTCTC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGCTGAGCTGCTGGTGTaGTACAGGGACTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAAELLV*YRDCTD
Trigger: GTCTGTGCAGTCCCTGTATCACACCAGCAGCTCAGC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGGTCTTGAAGAACAGTaGTGTGACCCAGTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKGLEEQ*CDPVVP
Trigger: TGGCACTACTGGGTCACAGCACTGTTCTTCAAGACC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTGGACTGCATATCTTaGTGGGTTTTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILDCIS*WVLAWL
Trigger: CAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGTGATTAGACTGAGTTaGATATCTGGCTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTVIRLS*ISGCQT
Trigger: AGTCTGGCAGCCAGATATGCAACTCAGTCTAATCAC...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTGACACTTTGGGACTaGTATTTGTTGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVTLWD*YLLSHH
Trigger: GTGGTGGCTCAACAAATAGCAGTCCCAAAGTGTCAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATTTCTCAGACTCTTTaGTTGCTGTGCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEISQTL*LLCCQV
Trigger: CACCTGGCAGCACAGCAAGCAAAGAGTCTGAGAAAT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTGCCCACTGCTTTGTaGCACTGTCATGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILPTAL*HCHGTG
Trigger: TCCTGTACCATGACAGTGGCACAAAGCAGTGGGCAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCTTCTGTTGTCACAGTaGTGTCAAATGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLLLSQ*CQMLSP
Trigger: TGGAGACAACATTTGACAGCACTGTGACAACAGAAG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTATCGACTGGTACCACTaGGAGGATAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGIDWYH*EDSQHP
Trigger: TGGGTGCTGGCTATCCTCGCAGTGGTACCAGTCGAT...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGATGTCCCGGGAAGTTaGTGTGTCTGGTATTCGGTT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKDVPGS*CVWYSV
Trigger: AACCGAATACCAGACACAGCAACTTCCCGGGACATC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCACTGCTCACTGAACTaGTGTCATCCCAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTHCSLN*CHPSCL
Trigger: CAGACAGCTGGGATGACAGCAGTTCAGTGAGCAGTG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGGAAGCTTTCTGCCCTaGCTTCTCGGGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAGSFLP*LLGVFR
Trigger: CCTGAAGACCCCGAGAAGGCAGGGCAGAAAGCTTCC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCCCCGGGTGTTTTGAGTaGACTTGTTCCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPPGCFE*TCSSFL
Trigger: CAGAAAGCTGGAACAAGTGCACTCAAAACACCCGGG...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCCCCGGGTGTTTTGAGTaGACTTGTTCCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETPGCFE*TCSSFL
Trigger: CAGAAAGCTGGAACAAGTGCACTCAAAACACCCGGG...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGGCAGATTTGCCACCTaGCTTGGCACCAAACAACCT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTGRFAT*LGTKQP
Trigger: AGGTTGTTTGGTGCCAAGGCAGGTGGCAAATCTGCC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGGCAGATTTGCCACCTaGCTTGGCACCAAACAACCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENGRFAT*LGTKQP
Trigger: AGGTTGTTTGGTGCCAAGGCAGGTGGCAAATCTGCC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCGTGCAGAGGCAGATTTaGCACCTGCCTTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPVQRQI*HLPWHQ
Trigger: TTGGTGCCAAGGCAGGTGGCAAATCTGCCTCTGCAC...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGACTCCAGACTGCCTTaGCGCGCTAATGTGGTACTA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTDSRLP*RANVVL
Trigger: TAGTACCACATTAGCGCGGCAAGGCAGTCTGGAGTC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGCCTGCAGAGGAACTaGTCATATTGGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCLQRN*SYWQPT
Trigger: TGTGGGCTGCCAATATGAGCAGTTCCTCTGCAGGCA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGTATCCTTGCTGCCTaGAGAGGAACTGCTCATATT +
Preference number: 4 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTSILAA*RGTAHI
Trigger: AATATGAGCAGTTCCTCTGCAGGCAGCAAGGATACT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGCTCTTTTCAAAAGCTaGTACAAGGTGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDALFKS*YKVSIC
Trigger: GCAAATGCTCACCTTGTAGCAGCTTTTGAAAAGAGC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGAAGAGGAGGTGCTaGTTGAGGATTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKMKRRC*LRILTV
Trigger: CACCGTCAGAATCCTCAAGCAGCACCTCCTCTTCAT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATGTCGCAGCTTTGTGTaGTCGAGTAATTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSECRSFV*SSNWLL
Trigger: AAGCAGCCAATTACTCGAGCACACAAAGCTGCGACA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCTTCATGGTGGCTGGTaGTTTCGCTGTCGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLHGGW*FRCRSF
Trigger: AAAGCTGCGACAGCGAAAGCACCAGCCACCATGAAG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCCTTCATGGTGGCTGGTaGTTTCGCTGTCGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASLHGGW*FRCRSF
Trigger: AAAGCTGCGACAGCGAAAGCACCAGCCACCATGAAG...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGGGCCCTTGACAGGGTaGTTTTATACTGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENGPLTG*FYTGSG
Trigger: ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTTTTGGCTATCCCATGTaGAATCTGTTCAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTFGYPM*NLFSCP
Trigger: AGGGCAACTGAACAGATTGCACATGGGATAGCCAAA...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAATCTGGCTGCCAGACTaGACTGCATATCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIIWLPD*TAYLAG
Trigger: CCCAGCAAGATATGCAGTCCAGTCTGGCAGCCAGAT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCACCCTAGAGGGCCCTaGAAGCCTAGTAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENHPRGP*KPSRLF
Trigger: AAAAAGCCTACTAGGCTTCCAGGGCCCTCTAGGGTG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCATGGTGTGGGGGAGGTaGCTGTACTTGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAMVWGR*LYLTAL
Trigger: TAAAGCAGTCAAGTACAGCCACCTCCCCCACACCAT...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATGTCTGAAGATGGTGTaGGGGAGGTGGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKICLKMV*GRWLYL
Trigger: CAAGTACAGCCACCTCCCCCACACCATCTTCAGACA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGTCTGAAGATGGTGTaGGGGAGGTGGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCLKMV*GRWLYL
Trigger: CAAGTACAGCCACCTCCCCCACACCATCTTCAGACA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAATGCCCTGTAAATGAATaGTGCCACTGTCGCGGTATT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQCPVNE*CHCRGI
Trigger: AATACCGCGACAGTGGCACCATTCATTTACAGGGCA...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCCCAGGTCTCGTCTGTaGTGGAGCGTTTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENPRSRL*WSVSLN
Trigger: ATTCAGAGAAACGCTCCACCACAGACGAGACCTGGG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCAGGTCTCGTCTGTaGTGGAGCGTTTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIPRSRL*WSVSLN
Trigger: ATTCAGAGAAACGCTCCACCACAGACGAGACCTGGG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTTTCTCAGAAGCTTTaGCATCATCGGTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTLSQKL*HHRFSR
Trigger: CCGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGCCAAAGGAGCTGGTaGCAGTCGATCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSQRSW*QSIFQC
Trigger: GCATTGGAAGATCGACTGCCACCAGCTCCTTTGGCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCCTGGTACTGGATCTGTaGCCTCCTCGGCCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFLVLDL*PPRPGM
Trigger: CATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAG...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTCTCAGTTTCGAGGTaGTGGCCCCAGCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVALSVSR*WPQQTC
Trigger: GCAAGTCTGCTGGGGCCACCACCTCGAAACTGAGAG...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGGTGGGGCTGGATTTaGGGGAACCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKRWGWI*GNLTKK
Trigger: TTTCTTTGTCAGGTTCCCCCAAATCCAGCCCCACCT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCAGGTGGGGCTGGATTTaGGGGAACCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETRWGWI*GNLTKK
Trigger: TTTCTTTGTCAGGTTCCCCCAAATCCAGCCCCACCT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTGTGCACCACAGGCGCTaGCAGAGGTGGGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFVHHRR*QRWGWI
Trigger: AATCCAGCCCCACCTCTGCCAGCGCCTGTGGTGCAC...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGGATACTTGGATCCTaGCTGCCTGAGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTWILGS*LPETLC
Trigger: GCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGACAACCTTCGAAATGTaGGTGAGGCAATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRTTFEM*VRQYLD
Trigger: ATCCAGATATTGCCTCACCCACATTTCGAAGGTTGT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGAACTGCTCATATTaGCAGCCCACACGAGACCAC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRNCSY*QPTRDH
Trigger: GTGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGACTCAGAGCTCGTGTaGAGGCTAGTCATGGACTGG +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGDSELV*RLVMDW
Trigger: CCAGTCCATGACTAGCCTCCACACGAGCTCTGAGTC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTCTTTGCCCTCTTCTTaGTTGGCCTGCCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETSLPSS*LACRDD
Trigger: ATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTTCCTCCAGAGAAGTaGCACTCCCACAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENFPPEK*HSHKAG
Trigger: CCCAGCTTTGTGGGAGTGCCACTTCTCTGGAGGAAA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTTCCTCCAGAGAAGTaGCACTCCCACAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASFPPEK*HSHKAG
Trigger: CCCAGCTTTGTGGGAGTGCCACTTCTCTGGAGGAAA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATTTGGGAGGATGGTCTaGACCATTCAGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIFGRMV*TIQCSL
Trigger: CAGGGAGCACTGAATGGTCCAGACCATCCTCCCAAA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGATCTTTGGGAGGATaGTCTGGACCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSERSLGG*SGPFSA
Trigger: AGCACTGAATGGTCCAGACCATCCTCCCAAAGATCT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTAACCTTCTACATCCATaGGGCAAGGAAGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTNLLHP*GKEGIV
Trigger: GACTATTCCTTCCTTGCCCCATGGATGTAGAAGGTT...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTGGAGACCACAACTCTaGGTCAGGGCCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFAWRPQL*VRALDR
Trigger: CCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTTTCCATTTGTGCTTATaGAGGACTGGCCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTFHLCL*RTGLLD
Trigger: ATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAA...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCTCTTGTTAAGGGAGTaGGCAGGTGGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGLLLRE*AGGLKR
Trigger: TCTTTTTAAACCACCTGCCCACTCCCTTAACAAGAG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGTCTCAGCAGGAGGATaGGTCCACATTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASVSAGG*VHISLC
Trigger: ACAGAGGGAAATGTGGACCCATCCTCCTGCTGAGAC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCCATTTCCAAACCAGTTaGAAATGCGCACCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETHFQTS*KCAPWV
Trigger: GACCCACGGTGCGCATTTCCAACTGGTTTGGAAATG...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTCCAGGCTGAGCTGCTaGTGTGATACAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSRLSC*CDTGTA
Trigger: TGCAGTCCCTGTATCACACCAGCAGCTCAGCCTGGA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGTGGCACTGTGTTTaGCATTCATGGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRWHCV*HSWTCC
Trigger: GCAGCAAGTCCATGAATGTCAAACACAGTGCCACCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGGAGGTGGCTGTACTTaGCTGCTTTACAGTCAACAT +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPGGGCT*LLYSQH
Trigger: ATGTTGACTGTAAAGCAGTCAAGTACAGCCACCTCC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGTTTTGACCCCTTCTaGGACAGGTGGCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSFDPF*DRWLQS
Trigger: AGACTGAAGCCACCTGTCTCAGAAGGGGTCAAAACT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGGACTGCTATTTGTTaGGCCACCACTATTCAGACC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIGTAIC*ATTIQT
Trigger: GGTCTGAATAGTGGTGGCTCAACAAATAGCAGTCCC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCAGGGGTCTGTGTGGATaGATCGACTGGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVARGLCG*IDWYHC
Trigger: GCAGTGGTACCAGTCGATTCATCCACACAGACCCCT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTCATGTCAATCTGTaGCATGTTTCCCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSETHVNL*HVSQPR
Trigger: TCTAGGCTGGGAAACATGTCACAGATTGACATGAGT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTCCACTGTCACATCGTaGACCCCTCTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSTVTS*TPLWMM
Trigger: CATCATCCAGAGAGGGGTTCACGATGTGACAGTGGA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGAGACCACTGCTCACTaGACTGCTGTCATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFETTAH*TAVIPA
Trigger: AGCTGGGATGACAGCAGTTCAGTGAGCAGTGGTCTC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTATCAAGGGTGTCACTaGGACCACTGCTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTYQGCH*DHCSLN
Trigger: GTTCAGTGAGCAGTGGTCTCAGTGACACCCTTGATA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACCTTCGAAATGTGGGTaGGGCAATATCTGGATACTT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQPSKCG*GNIWIL
Trigger: AAGTATCCAGATATTGCCTCACCCACATTTCGAAGG...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAGTCTGAGGGTTTATTaGAGAGAGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSLRVY*REGCCC
Trigger: GCAGCAGCAGCCCTCTCTTCAATAAACCCTCAGACT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTGGAGGCCAACGAGTaGCTTAAGCTTATAACATCT +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTLEANE*LKLITS
Trigger: AGATGTTATAAGCTTAAGTCACTCGTTGGCCTCCAG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGCCCTCCAGTAGAATaGGAACGCAACCACTCTTTG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISPPVE*ERNHSL
Trigger: CAAAGAGTGGTTGCGTTCTCATTCTACTGGAGGGCT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTACCATTCAGTGCTCCCTaGATAGCCGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLPFSAP*IAAWAA
Trigger: TGCTGCCCAGGCGGCTATTCAGGGAGCACTGAATGG...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCAGGAATGCTGTCTTCTaGTGCGAAGATCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPRNAVF*CEDLWE
Trigger: CTCCCAAAGATCTTCGCATCAGAAGACAGCATTCCT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGGATGCCGGAAGGGATaGATCAGTAAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKGCRKG*ISKLFN
Trigger: ATTGAAGAGCTTACTGATTCATCCCTTCCGGCATCC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTAATTCCTTTTCTCTaGGCTCGCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELIPFL*ARSSAA
Trigger: TGCAGCTGAAGAGCGAGCTCAGAGAAAAGGAATTAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAAGTACCACTCGGTCCTaGGAGTATAATTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQSTTRS*EYNSVM
Trigger: CATCACAGAATTATACTCTCAGGACCGAGTGGTACT...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGTCAAGCACCCACTTTaGAGGATCTTCCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTVKHPL*RIFPWC
Trigger: ACACCATGGGAAGATCCTTCAAAGTGGGTGCTTGAC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATTGCGGAATGTGCTTTaGGGTTGTGGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLRNVL*GCGFLS
Trigger: ACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGTTCTGGAATGGGGTaGGCGCACAACACAAACACT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTCSGMG*AHNTNT
Trigger: AGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGCTTCAAAGTCAGGGTaGCAATTCTATGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRASKSG*QFYVHK
Trigger: TTTATGCACATAGAATTGTCACCCTGACTTTGAAGC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGTTGGCCTGCCGAGATaGTGGGGTATATCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTVGLPR*WGISSK
Trigger: TTTCGAAGATATACCCCATCATCTCGGCAGGCCAAC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552895.5
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTCTCCCCATCACTGGTaGGGGAAAGATTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFSPHHW*GKDWSE
Trigger: CTCTGACCAATCTTTCCCTCACCAGTGATGGGGAGA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGACCCAACAGCTGGCTaGCTCAGTTTTGAGGCAACC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFDPTAG*LSFEAT
Trigger: GGTTGCCTCAAAACTGAGGCAGCCAGCTGTTGGGTC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGCTGCCAGACTGGACTaGATATCTTGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTAARLD*ISCWVL
Trigger: CAAAACCCAGCAAGATATGCAGTCCAGTCTGGCAGC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGCAGTACTGGGAGGCTaGACGTTACCATTTACACCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENAVLGG*TLPFTP
Trigger: AGGTGTAAATGGTAACGTGCAGCCTCCCAGTACTGC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTTTGCTTGCTGTGCTaGCAGGTGAAATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLCLLC*QVKWFA
Trigger: AGCAAACCATTTCACCTGGCAGCACAGCAAGCAAAG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCCTGTAAATGAATGGTaGCACTGTCGCGGTATTCGG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENPVNEW*HCRGIR
Trigger: CCGAATACCGCGACAGTGGCACCATTCATTTACAGG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCTGAAGTCGCGGACATaGCTGGCCCAACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVLKSRT*LAQPPG
Trigger: ACCTGGAGGTTGGGCCAGGCATGTCCGCGACTTCAG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTCCAGGTCACTGCTTaGTTTCTCACTCATGTCAAT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVQVTA*FLTHVN
Trigger: ATTGACATGAGTGAGAAAGCAAGCAGTGACCTGGAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCACACAGTCTTCCACTTaGCACCAGCATCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVATQSST*HQHPHG
Trigger: GCCATGGGGATGCTGGTGGCAAGTGGAAGACTGTGT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATCCCTTCATCTCCACTaGTTTTTCCTGCATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESLHLH*FFLHLK
Trigger: CTTCAGATGCAGGAAAAAGCAGTGGAGATGAAGGGA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTAATTTTACCCAGTGTTaGAGAGCCACTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGNFTQC*RATCYG
Trigger: ACCATAACAAGTGGCTCTGCAACACTGGGTAAAATT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAGGAATGCCACTGGTaGTGGATTTTGAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAQECHW*WILKGG
Trigger: CCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTG...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACGTTGGAATCAATACTaGTGGTACTGGATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKRWNQY*WYWICG
Trigger: GCCACAGATCCAGTACCAGCAGTATTGATTCCAACG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCTGCCTGAGACCTTGTaGACCACAGGCGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVLPETL*TTGAGR
Trigger: TCTGCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTTACTTGGATCCTGGCTaGCTGAGACCTTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGYLDPG*LRPCAP
Trigger: TGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTA...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCACCCTCAGTATTAGGTaGAGAGGCAGATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTTLSIR*RGRFAT
Trigger: GGTGGCAAATCTGCCTCTGCACCTAATACTGAGGGT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTAGAGAGGGCTGCTGCTaGCGCTTAGCCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSREGCC*RLAHQH
Trigger: GTGCTGGTGGGCTAAGCGGCAGCAGCAGCCCTCTCT...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGAAAGAGTGAACCGATaGTGGGCTGGAGGCCAACGA +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFAERVNR*WAGGQR
Trigger: TCGTTGGCCTCCAGCCCAGCATCGGTTCACTCTTTC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCAGCTCGGAGTATCCTTaGTGCCTGCAGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVASSEYP*CLQRNC
Trigger: GCAGTTCCTCTGCAGGCAGCAAGGATACTCCGAGCT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGTATTTCTGTCAAGCTaGATGCTTTCTGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDVFLSS*MLSERV
Trigger: TACTCTCTCAGAAAGCATGCAGCTTGACAGAAATAC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGAACGCAACCACTCTTTaGCCTCTTCTTGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVENATTL*PLLGWP
Trigger: AGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTT...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAACGCAACCACTCTTTaGCCTCTTCTTGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTNATTL*PLLGWP
Trigger: AGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAGTCTTGGGCTGGGATaGTGTTTGAGCGCATCATGC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSLGLG*CLSASC
Trigger: GCATGATGCGCTCAAACAGCATCCCAGCCCAAGACT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGTAAAGAGAAGAAGTaGTGGACACCAGTGATAATG +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRSKEKK*WTPVIM
Trigger: CATTATCACTGGTGTCCAGCACTTCTTCTCTTTACT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGTCTGGACCATTCAGTaGTCCCTGAATAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFVWTIQ*SLNSRL
Trigger: CAGGCGGCTATTCAGGGAGCACTGAATGGTCCAGAC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTTGTGTTACCAGTTTCTaGCTTCAACCGGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTCVTSF*LQPVIF
Trigger: GAAAATGACCGGTTGAAGGCAGAAACTGGTAACACA...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCATGAAGAGGAGGTGCTaGTTGAGGATTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTMKRRC*LRILTV
Trigger: CACCGTCAGAATCCTCAAGCAGCACCTCCTCTTCAT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCATGAAGAGGAGGTGCTaGTTGAGGATTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASMKRRC*LRILTV
Trigger: CACCGTCAGAATCCTCAAGCAGCACCTCCTCTTCAT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCAAGATGAAGAGGAGGTaGTGCTTGAGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPKMKRR*CLRILT
Trigger: CGTCAGAATCCTCAAGCAGCACCTCCTCTTCATCTT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGAAAGTCCTAATGACTaGCTGGAAGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEESPND*LEDEEE
Trigger: CTCCTCTTCATCTTCCAGGCAGTCATTAGGACTTTC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGATTTTTGGTCCTTTaGTCGACCATAGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSERFLVL*STIALA
Trigger: AGCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGACCCTCTCTCACTaGCTCCAGAATATAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEKTLSH*LQNIRY
Trigger: GTACCTTATATTCTGGAGGCAGTGAGAGAGGGTCTT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATCAGTTTGCGGAATGTaGTTTGAGGTTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSVCGM*FEVVAS
Trigger: GGAAGCCACAACCTCAAAGCACATTCCGCAAACTGA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACCTTCTGTGTCAGTTTaGGGAATGTGCTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTPSVSV*GMCFEV
Trigger: AACCTCAAAGCACATTCCGCAAACTGACACAGAAGG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCTGTCGCAGCTTTGTGTaGTCGAGTAATTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPACRSFV*SSNWLL
Trigger: AAGCAGCCAATTACTCGAGCACACAAAGCTGCGACA...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCTGTCGCAGCTTTGTGTaGTCGAGTAATTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPCRSFV*SSNWLL
Trigger: AAGCAGCCAATTACTCGAGCACACAAAGCTGCGACA...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGCACAATTCCATTTGTaGTTATGGAGGACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPAQFHL*LWRTGL
Trigger: GAGGCCAGTCCTCCATAAGCACAAATGGAATTGTGC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTACTCTCTTTAAAGCCTaGCATGACAGATGTACTTTC +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGTLFKA*HDRCTF
Trigger: GAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCAAAAGACCACAACAGTaGAAGGACAGGGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETKRPQQ*KDRGSS
Trigger: GGAAGAACCCCTGTCCTTCCACTGTTGTGGTCTTTT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAATTGCTAGGTAGTGGTTaGCCCAGTCAGTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQLLGSG*PSQCKS
Trigger: AGATTTACACTGACTGGGCCAACCACTACCTAGCAA...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATGCGCCAGGGCTTGCTaGCACTTGGAGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLCARAC*HLEKGW
Trigger: CCATCCCTTCTCCAAGTGCCAGCAAGCCCTGGCGCA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAATGGTGTGGGGGAGGTaGCTGTACTTGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIMVWGR*LYLTAL
Trigger: TAAAGCAGTCAAGTACAGCCACCTCCCCCACACCAT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTAGTCGCGGACATGCCTaGCCCAACCTCCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFSRGHA*PNLQVM
Trigger: CATGACCTGGAGGTTGGGCCAGGCATGTCCGCGACT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGTCTCGTCTGTGGTaGAGCGTTTCTCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRSRLW*SVSLNL
Trigger: CAGATTCAGAGAAACGCTCCACCACAGACGAGACCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCCAGGTCTCGTCTGTaGTGGAGCGTTTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFPRSRL*WSVSLN
Trigger: ATTCAGAGAAACGCTCCACCACAGACGAGACCTGGG...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGATGGCGCCCCTCCTTaGGCAGACATGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVDGAPP*ADMPLL
Trigger: GAGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTTTCTCAGAAGCTTTaGCATCATCGGTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLSQKL*HHRFSR
Trigger: CCGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTAGCCAAAGGAGCTGGTaGCAGTCGATCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFSQRSW*QSIFQC
Trigger: GCATTGGAAGATCGACTGCCACCAGCTCCTTTGGCT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTTTCCTTGTCTGTTTaGTTGACGGTGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEFSLSV*LTVTGL
Trigger: GAGTCCTGTCACCGTCAACCAAACAGACAAGGAAAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGGTGGGGCTGGATTTaGGGGAACCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIRWGWI*GNLTKK
Trigger: TTTCTTTGTCAGGTTCCCCCAAATCCAGCCCCACCT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTAGGCGCTGGCAGAGGTaGGGCTGGATTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFRRWQR*GWIWGN
Trigger: GTTCCCCCAAATCCAGCCCCACCTCTGCCAGCGCCT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGAACCGATGCTGGGCTaGAGGCCAACGAGTGACTTA +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAEPMLG*RPTSDL
Trigger: TAAGTCACTCGTTGGCCTCCAGCCCAGCATCGGTTC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCAGAGTGAACCGATGCTaGGCTGGAGGCCAACGAGTG +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLRVNRC*AGGQRV
Trigger: CACTCGTTGGCCTCCAGCCCAGCATCGGTTCACTCT...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTCTTTGCCCTCTTCTTaGTTGGCCTGCCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSLPSS*LACRDD
Trigger: ATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCTTTGCCCTCTTCTTaGTTGGCCTGCCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISLPSS*LACRDD
Trigger: ATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTGCAGAAGATGACATaGCAGAAGGGGAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLQKMT*QKGKPE
Trigger: CTCTGGTTTCCCCTTCTGCCATGTCATCTTCTGCAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTCGAAGGAAGAGTCTTaGGCTGGGATGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSKEES*AGMLFE
Trigger: CTCAAACAGCATCCCAGCCCAAGACTCTTCCTTCGA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTCGAAGGAAGAGTCTTaGGCTGGGATGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSKEES*AGMLFE
Trigger: CTCAAACAGCATCCCAGCCCAAGACTCTTCCTTCGA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTCGAAGGAAGAGTCTTaGGCTGGGATGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVESKEES*AGMLFE
Trigger: CTCAAACAGCATCCCAGCCCAAGACTCTTCCTTCGA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTTTTGGGAGGATGGTCTaGACCATTCAGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGFGRMV*TIQCSL
Trigger: CAGGGAGCACTGAATGGTCCAGACCATCCTCCCAAA...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTACCACTGCCAATACTaGAATGGCTTGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETYHCQY*NGLWHC
Trigger: ACAGTGCCACAAGCCATTCCAGTATTGGCAGTGGTA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATACCACTGCCAATACTaGAATGGCTTGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKYHCQY*NGLWHC
Trigger: ACAGTGCCACAAGCCATTCCAGTATTGGCAGTGGTA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGTCTTTTTCTTCTTCTTaGAGTCGGCATCATTACCAC +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRSFSSS*SRHHYH
Trigger: GTGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGA...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTGATGAAGGAGGCTTaGTGGACTTTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVMKEA*WTFSSQ
Trigger: TTGGGAAGAAAAAGTCCACCAAGCCTCCTTCATCAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGTGATGAAGGAGGCTTaGTGGACTTTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQVMKEA*WTFSSQ
Trigger: TTGGGAAGAAAAAGTCCACCAAGCCTCCTTCATCAC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTCAGTCACCAGCATTATaGGGTAACTTGGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGQSPAL*GNLGDA
Trigger: GGCATCCCCCAAGTTACCCCATAATGCTGGTGACTG...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTCTGCATCCGGTTCATaGCTTCCCGGATCTGATCAA +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVESASGS*LPGSDQ
Trigger: TTGATCAGATCCGGGAAGCCATGAACCGGATGCAGA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGTCCTAATGACTGCCTaGAAGATGAAGAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENVLMTA*KMKRRC
Trigger: GCACCTCCTCTTCATCTTCCAGGCAGTCATTAGGAC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGTCCTAATGACTGCCTaGAAGATGAAGAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIVLMTA*KMKRRC
Trigger: GCACCTCCTCTTCATCTTCCAGGCAGTCATTAGGAC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTCCTTACTTGACTTGTaGTCCACATTAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGSLLDL*STLKVA
Trigger: TGCCACTTTTAATGTGGACCACAAGTCAAGTAAGGA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAACCTTCTACATCCATaGGGCAAGGAAGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSENLLHP*GKEGIV
Trigger: GACTATTCCTTCCTTGCCCCATGGATGTAGAAGGTT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAAAATGTCTTCATGGTaGCTGGTGCTTTCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKKMSSW*LVLSLS
Trigger: CGACAGCGAAAGCACCAGCCACCATGAAGACATTTT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCAAGGGAGTGGGCAGGTaGTTTAAAAAGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETKGVGR*FKKTTV
Trigger: CACAGTGGTCTTTTTAAACCACCTGCCCACTCCCTT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCCAACTGACCCATTGGTaGTCACAGAGAGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASQLTHW*SQRVAP
Trigger: TGGTGCTACTCTCTGTGACCACCAATGGGTCAGTTG...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGCAACTGACCCATTGGTaGTCACAGAGAGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVEQLTHW*SQRVAP
Trigger: TGGTGCTACTCTCTGTGACCACCAATGGGTCAGTTG...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTACTAGGTGGACCTACTaGGATGTATTGCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTTRWTY*DVLQEI
Trigger: AATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAACACCTGAAGACGATTaGGGTCCTTTGGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKITPEDD*GPLEES
Trigger: AGATTCCTCCAAAGGACCTCAATCGTCTTCAGGTGT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGAGGTGGCTGTACTTaGCTGCTTTACAGTCAACAT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIGGGCT*LLYSQH
Trigger: ATGTTGACTGTAAAGCAGTCAAGTACAGCCACCTCC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCAGGGGTCTGTGTGGATaGATCGACTGGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLRGLCG*IDWYHC
Trigger: GCAGTGGTACCAGTCGATTCATCCACACAGACCCCT...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTGAACCCCTCTCTGGATaGTGTCCCGGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFEPLSG*CPGKLL
Trigger: CAGCAACTTCCCGGGACATCATCCAGAGAGGGGTTC...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGTTGGAGTAAGAGCTaGCAGAGGATGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCWSKS*QRMWCS
Trigger: TGAACACCACATCCTCTGTCAGCTCTTACTCCAACA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATTTTCCCGGGTGTTTTaGGTGCACTTGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIFSRVF*VHLFQL
Trigger: AAGCTGGAACAAGTGCACTCAAAACACCCGGGAAAA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTTTCCCGGGTGTTTTaGGTGCACTTGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASFSRVF*VHLFQL
Trigger: AAGCTGGAACAAGTGCACTCAAAACACCCGGGAAAA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCAGGACTCGAGCGCCCTaGCCCAATTTTAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFRTRAP*PNFSWF
Trigger: GAACCAACTAAAATTGGGTCAGGGCGCTCGAGTCCT...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTATGGATCCTGGCTGCCTaGGACCTTGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLWILAA*DLVHHR
Trigger: CCTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCA...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTAGGCTCTGGACCTCGTaGGTGCCTGTGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSRLWTS*VPVVSP
Trigger: TGGACTGACCACAGGCACTCACGAGGTCCAGAGCCT...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAGCCCTCCAGTAGAATaGGAACGCAACCACTCTTTG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSPPVE*ERNHSL
Trigger: CAAAGAGTGGTTGCGTTCTCATTCTACTGGAGGGCT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTAGCCCTCCAGTAGAATaGGAACGCAACCACTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFSPPVE*ERNHSL
Trigger: CAAAGAGTGGTTGCGTTCTCATTCTACTGGAGGGCT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGGGAAGGTTAAACTaGGACAAATTTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIPGRLN*DKFVGL
Trigger: GAGCCCAACAAATTTGTCTCAGTTTAACCTTCCCGG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGATAATGAAGAGCCATaGACTTCTTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQDNEEP*TSSMLS
Trigger: AGACAGCATGGAAGAAGTTCATGGCTCTTCATTATC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACATGGATTTGCTCTGAATaGGCCTTTTCTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTWICSE*AFSSAV
Trigger: TACAGCTGAAGAAAAGGCTCATTCAGAGCAAATCCA...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATGGATTTGCTCTGAATaGGCCTTTTCTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEWICSE*AFSSAV
Trigger: TACAGCTGAAGAAAAGGCTCATTCAGAGCAAATCCA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGCAACTTTTTCTTGTaGTGCAACCAGCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISNFFL*CNQLSP
Trigger: CGGAGAGAGCTGGTTGCATCACAAGAAAAAGTTGCT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGCATTTGCTGAAAGCTaGGATGTGAGGGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIAFAES*DVRVAT
Trigger: AGTTGCTACCCTCACATCTCAGCTTTCAGCAAATGC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGAATGCTGTCTTCTaGTGCGAAGATCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRNAVF*CEDLWE
Trigger: CTCCCAAAGATCTTCGCATCAGAAGACAGCATTCCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGGATGCCGGAAGGGATaGATCAGTAAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENGCRKG*ISKLFN
Trigger: ATTGAAGAGCTTACTGATTCATCCCTTCCGGCATCC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTGCAATTCCTTACTTaGCTTGTGGTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGLQFLT*LVVHIK
Trigger: TTTAATGTGGACCACAAGTCAAGTAAGGAATTGCAA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAACCCACCTGAAATTGTaGTGCAGCTCTAGATTTGGT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKTHLKL*CSSRFG
Trigger: ACCAAATCTAGAGCTGCATCACAATTTCAGGTGGGT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACACATAATACCCACCTaGAATTGTGATGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTHIIPT*NCDAAL
Trigger: TAGAGCTGCATCACAATTTCAGGTGGGTATTATGTG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTCTTCTGGTCGCAGCTaGAGTAAGGCTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFSSGRS*SKAGLS
Trigger: GGAGAGCCCAGCCTTACTTCAGCTGCGACCAGAAGA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCTTCCTCTTCCACAGTaGCCTTACCGCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFLPLPQ*PYRFSV
Trigger: AACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAAG...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAATCGGAAGAGCAGTATaGACAGGCTTTGACCCAACA +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIIGRAV*TGFDPT
Trigger: TGTTGGGTCAAAGCCTGTGCATACTGCTCTTCCGAT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCTGCAATGTCTTGTTaGAAGTCCTTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISAMSC*KSLISR
Trigger: GCGGCTGATCAAGGACTTGCAACAAGACATTGCAGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGTTGCATATCTGGCTaGCAGACTGGACTGCATATC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISCISG*QTGLHI
Trigger: GATATGCAGTCCAGTCTGGCAGCCAGATATGCAACT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTGATTAGACTGAGTTaGATATCTGGCTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKVIRLS*ISGCQT
Trigger: AGTCTGGCAGCCAGATATGCAACTCAGTCTAATCAC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTCTCCCTGGACCTTGCTaGTGCTTCCTGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFLPGPC*CFLQQA
Trigger: TGCCTGCTGCAGGAAGCAGCAGCAAGGTCCAGGGAG...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGCTTTCCTTCTTAGCTaGTGTTGTCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTAFLLS*CCLAAL
Trigger: AAGGGCAGCAAGACAACAGCAGCTAAGAAGGAAAGC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGCTTTCCTTCTTAGCTaGTGTTGTCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENAFLLS*CCLAAL
Trigger: AAGGGCAGCAAGACAACAGCAGCTAAGAAGGAAAGC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAACTCTTTGCTTGCTGTaGTGCCAGGTGAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKTLCLL*CQVKWF
Trigger: AAACCATTTCACCTGGCAGCACAGCAAGCAAAGAGT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATTTCTCAGACTCTTTaGTTGCTGTGCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENISQTL*LLCCQV
Trigger: CACCTGGCAGCACAGCAAGCAAAGAGTCTGAGAAAT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCAGCACCATTTCCTGTaGTCTGCCCACTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFAQHHFL*SAHCFV
Trigger: CACAAAGCAGTGGGCAGAGCACAGGAAATGGTGCTG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTTCTGTTGTCACAGTaGTGTCAAATGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELLLSQ*CQMLSP
Trigger: TGGAGACAACATTTGACAGCACTGTGACAACAGAAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCACATGTCCAGGTCACTaGTTGCTTTCTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETTCPGH*LLSHSC
Trigger: ACATGAGTGAGAAAGCAAGCAGTGACCTGGACATGT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCACATGTCCAGGTCACTaGTTGCTTTCTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPTCPGH*LLSHSC
Trigger: ACATGAGTGAGAAAGCAAGCAGTGACCTGGACATGT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGGAAGCTTTCTGCCCTaGCTTCTCGGGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQGSFLP*LLGVFR
Trigger: CCTGAAGACCCCGAGAAGGCAGGGCAGAAAGCTTCC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGGAAGCTTTCTGCCCTaGCTTCTCGGGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVGSFLP*LLGVFR
Trigger: CCTGAAGACCCCGAGAAGGCAGGGCAGAAAGCTTCC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGACAGGGAAGCTTTCTaGCCTGCCTTCTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLDREAF*PAFSGS
Trigger: AGACCCCGAGAAGGCAGGGCAGAAAGCTTCCCTGTC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGCCACTTGTTATGGTTaGTCCACTGCTGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIATCYG*STAGDH
Trigger: ATGATCACCAGCAGTGGAGCAACCATAACAAGTGGC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTACCCTCAGTATTAGGTaGAGAGGCAGATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFTLSIR*RGRFAT
Trigger: GGTGGCAAATCTGCCTCTGCACCTAATACTGAGGGT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCTTCTTGGTTGGCCTaGCGAGATGATGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISSWLA*RDDGVY
Trigger: ATATACCCCATCATCTCGGCAGGCCAACCAAGAAGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACACTTTCAGAGGAATaGTGTCTTCTGATGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSETLSEE*CLLMRR
Trigger: TCTTCGCATCAGAAGACAGCATTCCTCTGAAAGTGT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCATGAAGAGGAGGTGCTaGTTGAGGATTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPMKRRC*LRILTV
Trigger: CACCGTCAGAATCCTCAAGCAGCACCTCCTCTTCAT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAAGATGAAGAGGAGGTaGTGCTTGAGGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTKMKRR*CLRILT
Trigger: CGTCAGAATCCTCAAGCAGCACCTCCTCTTCATCTT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGATTTTTGGTCCTTTaGTCGACCATAGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKRFLVL*STIALA
Trigger: AGCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTCTTCGAAGATATCTaGCTAAAAAGCCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGFFEDI*LKSLSL
Trigger: CAGTGAAAGGCTTTTTAGGCAGATATCTTCGAAGAA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCAAGACCCTCTCTCACTaGCTCCAGAATATAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPKTLSH*LQNIRY
Trigger: GTACCTTATATTCTGGAGGCAGTGAGAGAGGGTCTT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCGATCTTCCCATGGTGTaGGTTTCCCATACATCTGAA +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETDLPMV*VSHTSE
Trigger: TTCAGATGTATGGGAAACGCACACCATGGGAAGATC...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGGGCCCTTGACAGGGTaGTTTTATACTGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAGPLTG*FYTGSG
Trigger: ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCTGCAATCTGTTCAGTTaGCCTGTCATTAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPCNLFS*PVIRVL
Trigger: AAGGACCCTAATGACAGGGCAACTGAACAGATTGCA...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGCACAATTCCATTTGTaGTTATGGAGGACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASAQFHL*LWRTGL
Trigger: GAGGCCAGTCCTCCATAAGCACAAATGGAATTGTGC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCAACGAGCTGACACAGTaGAGCAAGTACAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVANELTQ*SKYSLL
Trigger: GAGCAGGCTGTACTTGCTGCACTGTGTCAGCTCGTT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGGAAGCCAACTACGTTTaGCCGTCTTCATCCAATCAC +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVEEANYV*PSSSNH
Trigger: GTGATTGGATGAAGACGGGCAAACGTAGTTGGCTTC...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCAGTTCAGCAGGCCGCTaGATGATTCTTCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFASSAGR*MILPVA
Trigger: AGCCACTGGAAGAATCATGCAGCGGCCTGCTGAACT...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTAGTGCCAAGATTTaGTATCGGAAGAGCAGTATG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESSAKI*YRKSSM
Trigger: CATACTGCTCTTCCGATACCAAATCTTGGCACTACT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGGGTTTTGGCCTGGCTaGCTTCCGATGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFGFWPG*LPMEGK
Trigger: CTTCCCCTCCATCGGAAGCCAGCCAGGCCAAAACCC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCTGCCCAGCAGTACTaGGAGGCTGCACGTTACCAT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVAAQQY*EAARYH
Trigger: ATGGTAACGTGCAGCCTCCCAGTACTGCTGGGCAGC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGCTTTACAGTCAACATaGTGGAGGTGGCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIALQST*WRWHCV
Trigger: AACACAGTGCCACCTCCACCATGTTGACTGTAAAGC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGTTTTGGAATACCACTaGAAGACGGAATTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRVLEYH*KTELSF
Trigger: AAAGCTTAATTCCGTCTTCCAGTGGTATTCCAAAAC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTTGTGCCACTGTCATaGTACAGGAACCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENFVPLS*YRNQKE
Trigger: CTCCTTCTGGTTCCTGTACCATGACAGTGGCACAAA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATTTGTGCCACTGTCATaGTACAGGAACCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIFVPLS*YRNQKE
Trigger: CTCCTTCTGGTTCCTGTACCATGACAGTGGCACAAA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGCCCTGTAAATGAATaGTGCCACTGTCGCGGTATT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTCPVNE*CHCRGI
Trigger: AATACCGCGACAGTGGCACCATTCATTTACAGGGCA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTGATGGCGCCCCTCCTTaGGCAGACATGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFDGAPP*ADMPLL
Trigger: GAGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATC...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCTTTCTCAGAAGCTTTaGCATCATCGGTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLSQKL*HHRFSR
Trigger: CCGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAATTGACTTCCCGCCAATaGCAGCAGATTTTGGAATTT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQLTSRQ*QQILEF
Trigger: AAATTCCAAAATCTGCTGCCATTGGCGGGAAGTCAA...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGGAATCAATACTGCTaGTACTGGATCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTWNQYC*YWICGL
Trigger: GAGGCCACAGATCCAGTACCAGCAGTATTGATTCCA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGTCAGTTTCGAGGTGGTaGCCCCAGCAGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQSVSRW*PQQTCC
Trigger: GCAGCAAGTCTGCTGGGGCCACCACCTCGAAACTGA...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAACAACCTTCGAAATGTaGGTGAGGCAATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQTTFEM*VRQYLD
Trigger: ATCCAGATATTGCCTCACCCACATTTCGAAGGTTGT...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCATTTGCCACCTGCCTTaGCACCAAACAACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTICHLP*HQTTFE
Trigger: TTCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAAT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCCTCGTGAGTGCCTGTaGTCAGTCCAGACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVPRECL*SVQTRS
Trigger: GCTCCTTGTCTGGACTGACCACAGGCACTCACGAGG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCCTGCAGAAGATGACATaGCAGAAGGGGAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPLQKMT*QKGKPE
Trigger: CTCTGGTTTCCCCTTCTGCCATGTCATCTTCTGCAG...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTCTGCAGAAGATGACATaGCAGAAGGGGAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGLQKMT*QKGKPE
Trigger: CTCTGGTTTCCCCTTCTGCCATGTCATCTTCTGCAG...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGAGATCTTTGGGAGGATaGTCTGGACCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVERSLGG*SGPFSA
Trigger: AGCACTGAATGGTCCAGACCATCCTCCCAAAGATCT...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGATCTTTGGGAGGATaGTCTGGACCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENRSLGG*SGPFSA
Trigger: AGCACTGAATGGTCCAGACCATCCTCCCAAAGATCT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTACCACTGCCAATACTaGAATGGCTTGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTYHCQY*NGLWHC
Trigger: ACAGTGCCACAAGCCATTCCAGTATTGGCAGTGGTA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCATGAAGGAGGCTTGGTaGACTTTTTCTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETMKEAW*TFSSQR
Trigger: CCTTTGGGAAGAAAAAGTCCACCAAGCCTCCTTCAT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGAAGGAGGCTTGGTaGACTTTTTCTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKMKEAW*TFSSQR
Trigger: CCTTTGGGAAGAAAAAGTCCACCAAGCCTCCTTCAT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTGTGCTCGAGTAATTaGCTGCTTCTTGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKVCSSN*LLLGVS
Trigger: TGAAACTCCAAGAAGCAGCCAATTACTCGAGCACAC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGGAGACCACAACTCTaGGTCAGGGCCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVWRPQL*VRALDR
Trigger: CCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTGGAGACCACAACTCTaGGTCAGGGCCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFWRPQL*VRALDR
Trigger: CCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACAAGATGGACCCTGCCTaGGGCGAACAGCCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYKMDPA*GEQPLR
Trigger: TCTGAGGGGCTGTTCGCCCCAGGCAGGGTCCATCTT...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCGACAGATCAGAAAGATaGACCCTGCCTGGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLDRSER*TLPGAN
Trigger: GTTCGCCCCAGGCAGGGTCCATCTTTCTGATCTGTC...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGGATTTGTTCTGGAATaGGGTGAGCGCACAACACAA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTGFVLE*GERTTQ
Trigger: TTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGACAGTAGTGTTTTTCTaGTGGTTGCACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRTVVFF*WLHNSI
Trigger: AATGGAATTGTGCAACCACCAGAAAAACACTACTGT...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACCAGTTAGAATTAAATTaGCACTTCTCCAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDQLELN*HFSSLP
Trigger: TGGCAAACTGGAGAAGTGCCAATTTAATTCTAACTG...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGGGAGTGGGCAGGTaGTTTAAAAAGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENKGVGR*FKKTTV
Trigger: CACAGTGGTCTTTTTAAACCACCTGCCCACTCCCTT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGTGCTTCCAGCCCTGCTaGATAATAATTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRCFQPC*IIIQNL
Trigger: AAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCA...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTCTGCTGATGCTGCTTaGCTTGGAGGACACGTTTTC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSADAA*LGGHVF
Trigger: GAAAACGTGTCCTCCAAGCCAAGCAGCATCAGCAGA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGGCTTCAGTCTGTCTaGAGATGGTGTGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVWLQSV*RWCGGG
Trigger: ACCTCCCCCACACCATCTTCAGACAGACTGAAGCCA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCTATGTTGCTGCTGTTaGGGGAGTTGGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLLCCCC*GSWTAP
Trigger: TGGTGCTGTCCAACTCCCTCAACAGCAGCAACATAG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGAGGCGTGGTATACATaGACCTCGAGGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQEAWYT*TSRGLC
Trigger: ACACAGACCCCTCGAGGTTCATGTATACCACGCCTC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGGTGATCATGGCAGATaGCCCTACTCCACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFGDHGR*PYSTWF
Trigger: AAACCAAGTGGAGTAGGGTCATCTGCCATGATCACC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGCCTTCGAAATGTGGGTaGGGCAATATCTGGATACTT +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVEPSKCG*GNIWIL
Trigger: AAGTATCCAGATATTGCCTCACCCACATTTCGAAGG...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTCGAAATGTGGGTaGGGCAATATCTGGATACTT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIPSKCG*GNIWIL
Trigger: AAGTATCCAGATATTGCCTCACCCACATTTCGAAGG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTGGAGGCCAACGAGTaGCTTAAGCTTATAACATCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLEANE*LKLITS
Trigger: AGATGTTATAAGCTTAAGTCACTCGTTGGCCTCCAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAAGCTGCATGCTTTCTaGGAGAGTAGATCTCACACT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIKLHAF*ESRSHT
Trigger: AGTGTGAGATCTACTCTCTCAGAAAGCATGCAGCTT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTTATGGATTTGCTCTaGATGAGCCTTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEFMDLL*MSLFFS
Trigger: GCTGAAGAAAAGGCTCATTCAGAGCAAATCCATAAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTAGCAACTTTTTCTTGTaGTGCAACCAGCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGSNFFL*CNQLSP
Trigger: CGGAGAGAGCTGGTTGCATCACAAGAAAAAGTTGCT...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGCATTTGCTGAAAGCTaGGATGTGAGGGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGAFAES*DVRVAT
Trigger: AGTTGCTACCCTCACATCTCAGCTTTCAGCAAATGC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTAGGAATGCTGTCTTCTaGTGCGAAGATCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFRNAVF*CEDLWE
Trigger: CTCCCAAAGATCTTCGCATCAGAAGACAGCATTCCT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCGGATGCCGGAAGGGATaGATCAGTAAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPGCRKG*ISKLFN
Trigger: ATTGAAGAGCTTACTGATTCATCCCTTCCGGCATCC...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGGGCTTCATGGATGCTaGGCCACAGTCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVGLHGC*ATVTSI
Trigger: AATGCTGGTGACTGTGGCTCAGCATCCATGAAGCCC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGTACCACTCGGTCCTaGGAGTATAATTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISTTRS*EYNSVM
Trigger: CATCACAGAATTATACTCTCAGGACCGAGTGGTACT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCACCCACCTGAAATTGTaGTGCAGCTCTAGATTTGGT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASTHLKL*CSSRFG
Trigger: ACCAAATCTAGAGCTGCATCACAATTTCAGGTGGGT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTCACTGGTTCTGTATaGTTTGCACATAATACCCAC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEFTGSV*FAHNTH
Trigger: GTGGGTATTATGTGCAAATCATACAGAACCAGTGAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGTCAAGCACCCACTTTaGAGGATCTTCCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFAVKHPL*RIFPWC
Trigger: ACACCATGGGAAGATCCTTCAAAGTGGGTGCTTGAC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTTCTTCTGGTCGCAGCTaGAGTAAGGCTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFSSGRS*SKAGLS
Trigger: GGAGAGCCCAGCCTTACTTCAGCTGCGACCAGAAGA...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTACTGGGTCAGGGCCCTTaGCAGGGTGCTTTTATACTG +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLLGQGP*QGAFIL
Trigger: CAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAG...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTACTACTGAAGCCCTGTaGCCAGCACCGTGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFTTEAL*PAPCGT
Trigger: TGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTTCCTCTTCCACAGTaGCCTTACCGCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVALPLPQ*PYRFSV
Trigger: AACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAAG...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAAACTTCTCCAATGACTaGTCAGTTTTCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQNFSND*SVFMHS
Trigger: AGAGTGCATGAAAACTGATCAGTCATTGGAGAAGTT...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGTTCTATAGCAACTaGCCCATTGGTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASLFYSN*PIGGHR
Trigger: TCTGTGACCACCAATGGGTCAGTTGCTATAGAACAA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGATTTGATCCATGTTTaGGGCTTCAAAGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASDLIHV*GFKVRV
Trigger: CACCCTGACTTTGAAGCCTCAAACATGGATCAAATC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAGTTTCACAACAGATTTaGTCCATGTTTGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTVSQQI*SMFEAS
Trigger: TGAAGCCTCAAACATGGATCAAATCTGTTGTGAAAC...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTTACTCTAACGAGCTaGCACAGTGCAGCAAGTACA +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASFTLTS*HSAAST
Trigger: TGTACTTGCTGCACTGTGTCAGCTCGTTAGAGTAAA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR TCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGCCCCCAATTTAGCTTaGCACATCACTTTACTAATC +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPAPNLA*HITLLI
Trigger: GATTAGTAAAGTGATGTGTCAAGCTAAATTGGGGGC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTATCGGAAGAGCAGTATaGACAGGCTTTGACCCAACA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGIGRAV*TGFDPT
Trigger: TGTTGGGTCAAAGCCTGTGCATACTGCTCTTCCGAT...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGTGGCTGTACTTGACTaGTTTACAGTCAACATGGTG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENVAVLD*FTVNMV
Trigger: CACCATGTTGACTGTAAAGCAGTCAAGTACAGCCAC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTCCAGGTGAAATGGTTTaGTTTACTGTTGGAACTTTA +
Preference number: 4 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTPGEMV*FTVGTL
Trigger: TAAAGTTCCAACAGTAAAGCAAACCATTTCACCTGG...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAACATGTCCAGGTCACTaGTTGCTTTCTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKITCPGH*LLSHSC
Trigger: ACATGAGTGAGAAAGCAAGCAGTGACCTGGACATGT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGATGTCCCGGGAAGTTaGTGTGTCTGGTATTCGGTT +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFADVPGS*CVWYSV
Trigger: AACCGAATACCAGACACAGCAACTTCCCGGGACATC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTGACAGGGAAGCTTTCTaGCCTGCCTTCTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFDREAF*PAFSGS
Trigger: AGACCCCGAGAAGGCAGGGCAGAAAGCTTCCCTGTC...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGCCACTTGTTATGGTTaGTCCACTGCTGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGATCYG*STAGDH
Trigger: ATGATCACCAGCAGTGGAGCAACCATAACAAGTGGC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTTACCCAGTGTTaGAGAGCCACTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSENFTQC*RATCYG
Trigger: ACCATAACAAGTGGCTCTGCAACACTGGGTAAAATT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTCGTTGGAATCAATACTaGTGGTACTGGATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGRWNQY*WYWICG
Trigger: GCCACAGATCCAGTACCAGCAGTATTGATTCCAACG...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGTATCCTTGCTGCCTaGAGAGGAACTGCTCATATT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISILAA*RGTAHI
Trigger: AATATGAGCAGTTCCTCTGCAGGCAGCAAGGATACT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGAGTATCCTTGCTGCCTaGAGAGGAACTGCTCATATT +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVESILAA*RGTAHI
Trigger: AATATGAGCAGTTCCTCTGCAGGCAGCAAGGATACT...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFSSWLA*RDDGVY
Trigger: ATATACCCCATCATCTCGGCAGGCCAACCAAGAAGA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGTCTGGACCATTCAGTaGTCCCTGAATAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQVWTIQ*SLNSRL
Trigger: CAGGCGGCTATTCAGGGAGCACTGAATGGTCCAGAC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCACACTTTCAGAGGAATaGTGTCTTCTGATGCGAAGA +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPATLSEE*CLLMRR
Trigger: TCTTCGCATCAGAAGACAGCATTCCTCTGAAAGTGT...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAATTTCAATTTCATTCTaGATCCGGTTCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTISISF*IRFMAS
Trigger: GGAAGCCATGAACCGGATGCAGAATGAAATTGAAAT...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGAAAGTCCTAATGACTaGCTGGAAGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIESPND*LEDEEE
Trigger: CTCCTCTTCATCTTCCAGGCAGTCATTAGGACTTTC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGAAAGTCCTAATGACTaGCTGGAAGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASESPND*LEDEEE
Trigger: CTCCTCTTCATCTTCCAGGCAGTCATTAGGACTTTC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAGACCCTCTCTCACTaGCTCCAGAATATAAGGTAC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENKTLSH*LQNIRY
Trigger: GTACCTTATATTCTGGAGGCAGTGAGAGAGGGTCTT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCAAGACCCTCTCTCACTaGCTCCAGAATATAAGGTAC +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASKTLSH*LQNIRY
Trigger: GTACCTTATATTCTGGAGGCAGTGAGAGAGGGTCTT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGATCTTCCCATGGTGTaGGTTTCCCATACATCTGAA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENDLPMV*VSHTSE
Trigger: TTCAGATGTATGGGAAACGCACACCATGGGAAGATC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCCTTCTGTGTCAGTTTaGGGAATGTGCTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTPSVSV*GMCFEV
Trigger: AACCTCAAAGCACATTCCGCAAACTGACACAGAAGG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGCAATCTGTTCAGTTaGCCTGTCATTAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTCNLFS*PVIRVL
Trigger: AAGGACCCTAATGACAGGGCAACTGAACAGATTGCA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTTCTCCTTACTTCTTTaGTCCGGAACACAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETFSLLL*SGTQRV
Trigger: AACTCTCTGTGTTCCGGAGCAAAGAAGTAAGGAGAA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTGCTAGGTAGTGGTTaGCCCAGTCAGTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLLGSG*PSQCKS
Trigger: AGATTTACACTGACTGGGCCAACCACTACCTAGCAA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGCTTTACAGTCAACATaGTGGAGGTGGCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGALQST*WRWHCV
Trigger: AACACAGTGCCACCTCCACCATGTTGACTGTAAAGC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTTAGAGCCTGGTTTTaGAATACCACTGGAAGACGG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTFRAWF*NTTGRR
Trigger: CCGTCTTCCAGTGGTATTCCAAAACCAGGCTCTAAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATCCAGGTCATGGGGGTaGGTCGACTTGTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLSRSWG*VDLSSW
Trigger: CCAACTTGACAAGTCGACCCACCCCCATGACCTGGA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGGAAGTTGCTGTGTCTaGTATTCGGTTCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTGSCCV*YSVQTS
Trigger: AGAAGTCTGAACCGAATACCAGACACAGCAACTTCC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGGAAGTTGCTGTGTCTaGTATTCGGTTCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENGSCCV*YSVQTS
Trigger: AGAAGTCTGAACCGAATACCAGACACAGCAACTTCC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCAGGTCTCGTCTGTGGTaGAGCGTTTCTCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVARSRLW*SVSLNL
Trigger: CAGATTCAGAGAAACGCTCCACCACAGACGAGACCT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCTTGACTTCCCGCCAATaGCAGCAGATTTTGGAATTT +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPLTSRQ*QQILEF
Trigger: AAATTCCAAAATCTGCTGCCATTGGCGGGAAGTCAA...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGGAATCAATACTGCTaGTACTGGATCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPWNQYC*YWICGL
Trigger: GAGGCCACAGATCCAGTACCAGCAGTATTGATTCCA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACTCAGTTTCGAGGTGGTaGCCCCAGCAGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYSVSRW*PQQTCC
Trigger: GCAGCAAGTCTGCTGGGGCCACCACCTCGAAACTGA...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTTTCCTTGTCTGTTTaGTTGACGGTGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTFSLSV*LTVTGL
Trigger: GAGTCCTGTCACCGTCAACCAAACAGACAAGGAAAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATTTTCCTTGTCTGTTTaGTTGACGGTGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIFSLSV*LTVTGL
Trigger: GAGTCCTGTCACCGTCAACCAAACAGACAAGGAAAA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAACAACCTTCGAAATGTaGGTGAGGCAATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKTTFEM*VRQYLD
Trigger: ATCCAGATATTGCCTCACCCACATTTCGAAGGTTGT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCAGGAACTGCTCATATTaGCAGCCCACACGAGACCAC +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLRNCSY*QPTRDH
Trigger: GTGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCT...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTTGCCCTCTTCTTGGTTaGCCTGCCGAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSCPLLG*PAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCA...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCTCTTTGCCCTCTTCTTaGTTGGCCTGCCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVASLPSS*LACRDD
Trigger: ATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGA...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTCGAAGGAAGAGTCTTaGGCTGGGATGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFASKEES*AGMLFE
Trigger: CTCAAACAGCATCCCAGCCCAAGACTCTTCCTTCGA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGTGATGAAGGAGGCTTaGTGGACTTTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTVMKEA*WTFSSQ
Trigger: TTGGGAAGAAAAAGTCCACCAAGCCTCCTTCATCAC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTACCTTTGGGTAATTaGTTTAGGAATCAGCGTATC +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVPLGN*FRNQRI
Trigger: GATACGCTGATTCCTAAACCAATTACCCAAAGGTAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCAACCTTCTACATCCATaGGGCAAGGAAGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASNLLHP*GKEGIV
Trigger: GACTATTCCTTCCTTGCCCCATGGATGTAGAAGGTT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGTGTGCTCGAGTAATTaGCTGCTTCTTGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTVCSSN*LLLGVS
Trigger: TGAAACTCCAAGAAGCAGCCAATTACTCGAGCACAC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGTCTTCATGGTGGCTaGTGCTTTCGCTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVCLHGG*CFRCRS
Trigger: GCTGCGACAGCGAAAGCACCAGCCACCATGAAGACA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTAAAATGTCTTCATGGTaGCTGGTGCTTTCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFKMSSW*LVLSLS
Trigger: CGACAGCGAAAGCACCAGCCACCATGAAGACATTTT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTGTGACCAGCACCGTGTaGCACAAAGGAGGTTGGACA +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFVTSTV*HKGGWT
Trigger: TGTCCAACCTCCTTTGTGCCACACGGTGCTGGTCAC...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGGATTTGTTCTGGAATaGGGTGAGCGCACAACACAA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGGFVLE*GERTTQ
Trigger: TTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTCTCTTGGATTTGTTCTaGAATGGGGTGAGCGCACAA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGLLDLF*NGVSAQ
Trigger: TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAG...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCCTCTTGTTAAGGGAGTaGGCAGGTGGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETLLLRE*AGGLKR
Trigger: TCTTTTTAAACCACCTGCCCACTCCCTTAACAAGAG...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR CAA 72 bp GTTTCGTGGTGTTGTTGTTCTATAGCAACTGACCCATaGGTGGTCACAGAGAGTAGCACCAAATACACGTCC +
Preference number: 4 (lower is better)
Translates to: VSWCCCSIATDP*VVTESSTKYTS
Trigger: GGACGTGTATTTGGTGCTACTCTCTGTGACCACCAATGGGTCAGTTGCTATAGAACAACAACACCACGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGATTTTAACGCAAGCTaGCAAGAAAGCATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFDFNAS*QESMEL
Trigger: GAGCTCCATGCTTTCTTGTCAGCTTGCGTTAAAATC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATGTAGCGAGATAAACTaGAAAACAGCCCTAGAATGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKICSEIN*KTALEW
Trigger: CCATTCTAGGGCTGTTTTTCAGTTTATCTCGCTACA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTAATGTGCCCTGTAAATaGATGGTGCCACTGTCGCGG +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVNVPCK*MVPLSR
Trigger: CCGCGACAGTGGCACCATTCATTTACAGGGCACATT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGGTGGAGCGTTTCTCTaGATCTGTCCTCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVGGAFL*ICPQLS
Trigger: ACTCAGCTGAGGACAGATTCAGAGAAACGCTCCACC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTTTTCTCCCTGCATTTaGCTTCCCGCCAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFFSPCI*LPANGS
Trigger: GCTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAATCATCCTGATTCTGTaGACCGTCCAAACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIIILIL*TVQTGF
Trigger: AAAACCAGTTTGGACGGTTCACAGAATCAGGATGAT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTACCACACGAGACCACCTaGTGTGAAAGAGTGAACCGA +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLPHETT*CERVNR
Trigger: TCGGTTCACTCTTTCACATCAGGTGGTCTCGTGTGG...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTCCAGCTGCAGAAGATaGCATGGCAGAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVSSCRR*HGRRGN
Trigger: GTTTCCCCTTCTGCCATGTCATCTTCTGCAGCTGGA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCCCGGGAAGGTTAAACTaGGACAAATTTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFPGRLN*DKFVGL
Trigger: GAGCCCAACAAATTTGTCTCAGTTTAACCTTCCCGG...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTATGAGCCCGAATGACTaGTGGCACGAGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVMSPND*WHEVFP
Trigger: AGGAAAGACCTCGTGCCATCAGTCATTCGGGCTCAT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGCATGCTGTCTCTGAATaGGCCCGAATGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQHAVSE*ARMTDG
Trigger: GCCATCAGTCATTCGGGCTCATTCAGAGACAGCATG...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGATAATGAAGAGCCATaGACTTCTTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIDNEEP*TSSMLS
Trigger: AGACAGCATGGAAGAAGTTCATGGCTCTTCATTATC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGGATTTGCTCTGAATaGGCCTTTTCTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENWICSE*AFSSAV
Trigger: TACAGCTGAAGAAAAGGCTCATTCAGAGCAAATCCA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCTTTATGGATTTGCTCTaGATGAGCCTTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPFMDLL*MSLFFS
Trigger: GCTGAAGAAAAGGCTCATTCAGAGCAAATCCATAAA...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTTTAATTCCTTTTCTCTaGGCTCGCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGLIPFL*ARSSAA
Trigger: TGCAGCTGAAGAGCGAGCTCAGAGAAAAGGAATTAA...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAGTACCACTCGGTCCTaGGAGTATAATTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSTTRS*EYNSVM
Trigger: CATCACAGAATTATACTCTCAGGACCGAGTGGTACT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTACCCACCTGAAATTGTaGTGCAGCTCTAGATTTGGT +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGTHLKL*CSSRFG
Trigger: ACCAAATCTAGAGCTGCATCACAATTTCAGGTGGGT...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCACATAATACCCACCTaGAATTGTGATGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENHIIPT*NCDAAL
Trigger: TAGAGCTGCATCACAATTTCAGGTGGGTATTATGTG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCAGGGTCCTTTCCAGTTaGGTAATGGAGCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASRVLSS*VMELSI
Trigger: AATAGAAAGCTCCATTACTCAACTGGAAAGGACCCT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGAGGGTCCTTTCCAGTTaGGTAATGGAGCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVERVLSS*VMELSI
Trigger: AATAGAAAGCTCCATTACTCAACTGGAAAGGACCCT...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACAGATAATACAGCTTTaGGGGTTTGCATTCTGTATT +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTQIIQL*GFAFCI
Trigger: AATACAGAATGCAAACCCTCAAAGCTGTATTATCTG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGCTTCATGTACAGTTTTaGAGCATGCTCACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVELHVQF*SMLTLA
Trigger: TGCTAGAGTGAGCATGCTTCAAAACTGTACATGAAG...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCCGTGTAAGGACCTATTaGCTTTGTGACACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASRVRTY*LCDTLK
Trigger: TTTCAGAGTGTCACAAAGTCAATAGGTCCTTACACG...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGTCAGTGTAAATCTTaGTGTCTTCTTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSQCKS*CLLSPW
Trigger: CCAAGGAGAAAGAAGACAGCAAGATTTACACTGACT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTCTGCAATGTCTTGTTaGAAGTCCTTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFASAMSC*KSLISR
Trigger: GCGGCTGATCAAGGACTTGCAACAAGACATTGCAGA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCTTTGCTTGCTGTGCTaGCAGGTGAAATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFALCLLC*QVKWFA
Trigger: AGCAAACCATTTCACCTGGCAGCACAGCAAGCAAAG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCACTCTTTGCTTGCTGTaGTGCCAGGTGAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPTLCLL*CQVKWF
Trigger: AAACCATTTCACCTGGCAGCACAGCAAGCAAAGAGT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCTCCTCCAGGCACTaGTTAGCAGTCTTACTATAT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENISSRH*LAVLLY
Trigger: ATATAGTAAGACTGCTAAGCAGTGCCTGGAGGAGAT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAGTCTCTTCTAAATTCTaGCTCAAGTCTGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTVSSKF*LKSAMF
Trigger: AAACATAGCAGACTTGAGGCAGAATTTAGAAGAGAC...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTTCTGTTGTCACAGTaGTGTCAAATGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILLLSQ*CQMLSP
Trigger: TGGAGACAACATTTGACAGCACTGTGACAACAGAAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCCTGAAGTCGCGGACATaGCTGGCCCAACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFLKSRT*LAQPPG
Trigger: ACCTGGAGGTTGGGCCAGGCATGTCCGCGACTTCAG...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGTCATCCCAGCTGTCTaGATCCACTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVVIPAV*IHCHIV
Trigger: CACGATGTGACAGTGGATGCAGACAGCTGGGATGAC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCTTGTTCCAGCTTTCTaGCTAGATGGCGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFLVPAF*LDGAPP
Trigger: AGGAGGGGCGCCATCTAGGCAGAAAGCTGGAACAAG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTCTTGTTCCAGCTTTCTaGCTAGATGGCGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFLVPAF*LDGAPP
Trigger: AGGAGGGGCGCCATCTAGGCAGAAAGCTGGAACAAG...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTCCCTTCATCTCCACTaGTTTTTCCTGCATCTGAAG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFSLHLH*FFLHLK
Trigger: CTTCAGATGCAGGAAAAAGCAGTGGAGATGAAGGGA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGCCACTTGTTATGGTTaGTCCACTGCTGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAATCYG*STAGDH
Trigger: ATGATCACCAGCAGTGGAGCAACCATAACAAGTGGC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGGCAGATTTGCCACCTaGCTTGGCACCAAACAACCT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVGRFAT*LGTKQP
Trigger: AGGTTGTTTGGTGCCAAGGCAGGTGGCAAATCTGCC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGCTCTTTTCAAAAGCTaGTACAAGGTGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIALFKS*YKVSIC
Trigger: GCAAATGCTCACCTTGTAGCAGCTTTTGAAAAGAGC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACACTTTCAGAGGAATaGTGTCTTCTGATGCGAAGA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENTLSEE*CLLMRR
Trigger: TCTTCGCATCAGAAGACAGCATTCCTCTGAAAGTGT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGTGTTACCAGTTTCTaGCTTCAACCGGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTCVTSF*LQPVIF
Trigger: GAAAATGACCGGTTGAAGGCAGAAACTGGTAACACA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGTGTTACCAGTTTCTaGCTTCAACCGGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCVTSF*LQPVIF
Trigger: GAAAATGACCGGTTGAAGGCAGAAACTGGTAACACA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGGATCCTATCAAATATaGCTGAGATTTTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEGSYQI*LRFLVL
Trigger: AAGGACCAAAAATCTCAGGCATATTTGATAGGATCC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCTTCTGTGTCAGTTTaGGGAATGTGCTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFPSVSV*GMCFEV
Trigger: AACCTCAAAGCACATTCCGCAAACTGACACAGAAGG...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGCAATCTGTTCAGTTaGCCTGTCATTAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPCNLFS*PVIRVL
Trigger: AAGGACCCTAATGACAGGGCAACTGAACAGATTGCA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGGCACTTCTCCAGTTTaGCACAGTAGTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFGTSPV*HSSVFL
Trigger: CAGAAAAACACTACTGTGGCAAACTGGAGAAGTGCC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCAGCACTGATAGCTCCTaGATAGTCAAAAACAACTGT +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPSTDSS*IVKNNC
Trigger: ACAGTTGTTTTTGACTATGCAGGAGCTATCAGTGCT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGTTTTGGAATACCACTaGAAGACGGAATTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEVLEYH*KTELSF
Trigger: AAAGCTTAATTCCGTCTTCCAGTGGTATTCCAAAAC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATGGAACTTTAGAGCCTaGTTTTGGAATACCACTGGA +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIWNFRA*FWNTTG
Trigger: TCCAGTGGTATTCCAAAACCAGGCTCTAAAGTTCCA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGCTTAGATAAGGACTaGGAAGGGCTCCCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLGLDKD*EGLPLV
Trigger: TACCAAGGGGAGCCCTTCCCAGTCCTTATCTAAGCC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTAGCCAAAGGAGCTGGTaGCAGTCGATCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFSQRSW*QSIFQC
Trigger: GCATTGGAAGATCGACTGCCACCAGCTCCTTTGGCT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTGACTTCCCGCCAATaGCAGCAGATTTTGGAATTT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLTSRQ*QQILEF
Trigger: AAATTCCAAAATCTGCTGCCATTGGCGGGAAGTCAA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTGAATGCCACTGGTGCTaGATTTTGAAGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFECHWC*ILKGGA
Trigger: TGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTC...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTTTTCCTTGTCTGTTTaGTTGACGGTGACAGGACTC +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFFSLSV*LTVTGL
Trigger: GAGTCCTGTCACCGTCAACCAAACAGACAAGGAAAA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAAAGAGAAGAAGTGCTaGACACCAGTGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKKEKKC*TPVIMK
Trigger: CTTCATTATCACTGGTGTCCAGCACTTCTTCTCTTT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCAAAGAGAAGAAGTGCTaGACACCAGTGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAKEKKC*TPVIMK
Trigger: CTTCATTATCACTGGTGTCCAGCACTTCTTCTCTTT...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCATGAAGGAGGCTTGGTaGACTTTTTCTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPMKEAW*TFSSQR
Trigger: CCTTTGGGAAGAAAAAGTCCACCAAGCCTCCTTCAT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTACAGTCACCAGCATTATaGGGTAACTTGGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLQSPAL*GNLGDA
Trigger: GGCATCCCCCAAGTTACCCCATAATGCTGGTGACTG...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGGCACTTCTAGGTTATaGGATCTAATTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKGTSRL*DLIKSP
Trigger: AGGAGACTTAATTAGATCCCATAACCTAGAAGTGCC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCTCCTTACTTGACTTGTaGTCCACATTAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPASLLDL*STLKVA
Trigger: TGCCACTTTTAATGTGGACCACAAGTCAAGTAAGGA...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATCCTTACTTGACTTGTaGTCCACATTAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSLLDL*STLKVA
Trigger: TGCCACTTTTAATGTGGACCACAAGTCAAGTAAGGA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCGTGTGCTCGAGTAATTaGCTGCTTCTTGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPVCSSN*LLLGVS
Trigger: TGAAACTCCAAGAAGCAGCCAATTACTCGAGCACAC...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGTGCTTATGGAGGACTaGCCTCTTGGATTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAVLMED*PLGFVL
Trigger: CAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTTCCATTTGTGCTTATaGAGGACTGGCCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPFHLCL*RTGLLD
Trigger: ATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACAGTTAGAATTAAATTaGCACTTCTCCAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEQLELN*HFSSLP
Trigger: TGGCAAACTGGAGAAGTGCCAATTTAATTCTAACTG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACACATCATGAGAACGTaGCAGTTAGAATTAAATTGG +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEHIMRT*QLELNW
Trigger: CCAATTTAATTCTAACTGCCACGTTCTCATGATGTG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCTCTTGTTAAGGGAGTaGGCAGGTGGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLLLRE*AGGLKR
Trigger: TCTTTTTAAACCACCTGCCCACTCCCTTAACAAGAG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACCAAGTACTTATTGTTaGGGCTTTACAAAGACTACA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEPSTYC*GFTKTT
Trigger: TGTAGTCTTTGTAAAGCCCCAACAATAAGTACTTGG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTGTAGCGAGATAAACTaGAAAACAGCCCTAGAATGG +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFCSEIN*KTALEW
Trigger: CCATTCTAGGGCTGTTTTTCAGTTTATCTCGCTACA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGATCCTTCTCTTCTTTaGCTGGTTTTTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENDPSLL*LVFQCK
Trigger: TTTGCACTGAAAAACCAGTCAAAGAAGAGAAGGATC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTCCACTGTCACATCGTaGACCCCTCTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFSTVTS*TPLWMM
Trigger: CATCATCCAGAGAGGGGTTCACGATGTGACAGTGGA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTATCAAGGGTGTCACTaGGACCACTGCTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVYQGCH*DHCSLN
Trigger: GTTCAGTGAGCAGTGGTCTCAGTGACACCCTTGATA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGAATCTGTCCTCAGCTaGGTATTCTTCCTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQESVLS*VFFLEG
Trigger: CCCCTCTAGGAAGAATACTCAGCTGAGGACAGATTC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGGTGGAGCGTTTCTCTaGATCTGTCCTCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFGGAFL*ICPQLS
Trigger: ACTCAGCTGAGGACAGATTCAGAGAAACGCTCCACC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACTTGCTCCACTGCTGGTaGTCATGGCAGATGACCCTA +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYLLHCW*SWQMTL
Trigger: TAGGGTCATCTGCCATGATCACCAGCAGTGGAGCAA...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTTTTCTCCCTGCATTTaGCTTCCCGCCAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFFSPCI*LPANGS
Trigger: GCTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTATCATCCTGATTCTGTaGACCGTCCAAACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFIILIL*TVQTGF
Trigger: AAAACCAGTTTGGACGGTTCACAGAATCAGGATGAT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTAGGACTCGAGCGCCCTaGCCCAATTTTAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFRTRAP*PNFSWF
Trigger: GAACCAACTAAAATTGGGTCAGGGCGCTCGAGTCCT...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTAGGGCTGGGCATTACTaGGGAAGATTTCACACCCTC +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFRAGHY*GRFHTL
Trigger: GAGGGTGTGAAATCTTCCTCAGTAATGCCCAGCCCT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTTATGGATTTGCTCTaGATGAGCCTTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASFMDLL*MSLFFS
Trigger: GCTGAAGAAAAGGCTCATTCAGAGCAAATCCATAAA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTTATGGATTTGCTCTaGATGAGCCTTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENFMDLL*MSLFFS
Trigger: GCTGAAGAAAAGGCTCATTCAGAGCAAATCCATAAA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTTAATTCCTTTTCTCTaGGCTCGCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFALIPFL*ARSSAA
Trigger: TGCAGCTGAAGAGCGAGCTCAGAGAAAAGGAATTAA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTCACTGGTTCTGTATaGTTTGCACATAATACCCAC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTFTGSV*FAHNTH
Trigger: GTGGGTATTATGTGCAAATCATACAGAACCAGTGAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATGTTCTGGAATGGGGTaGGCGCACAACACAAACACT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLCSGMG*AHNTNT
Trigger: AGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGACTTTGTGACACTCTaGAAACTGCACAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGDFVTL*KLHRCF
Trigger: GAAACATCTGTGCAGTTTTCAGAGTGTCACAAAGTC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTTGCTCGAATATATCTaGAGCAGAAAAGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVELLEYI*SRKEFT
Trigger: GGTGAACTCTTTTCTGCTTCAGATATATTCGAGCAA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAGTCAGTGTAAATCTTaGTGTCTTCTTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSQCKS*CLLSPW
Trigger: CCAAGGAGAAAGAAGACAGCAAGATTTACACTGACT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTTAGGGATCAAGCTTaGAATTTTGGAGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLRDQA*NFGGLF
Trigger: AAAAAGACCTCCAAAATTGCAAGCTTGATCCCTAAG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACAACTAGAAGCACTTaGTTTCTCCATGGTTATAGG +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENTTRST*FLHGYR
Trigger: CCTATAACCATGGAGAAAGCAAGTGCTTCTAGTTGT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGTCCAGGTCACTGCTTaGTTTCTCACTCATGTCAAT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAVQVTA*FLTHVN
Trigger: ATTGACATGAGTGAGAAAGCAAGCAGTGACCTGGAC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAAATTTTACCCAGTGTTaGAGAGCCACTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKINFTQC*RATCYG
Trigger: ACCATAACAAGTGGCTCTGCAACACTGGGTAAAATT...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTACCCTCAGTATTAGGTaGAGAGGCAGATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVTLSIR*RGRFAT
Trigger: GGTGGCAAATCTGCCTCTGCACCTAATACTGAGGGT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTTCGGAGTATCCTTGCTaGCTGCAGAGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSSEYPC*LQRNCS
Trigger: TGAGCAGTTCCTCTGCAGGCAGCAAGGATACTCCGA...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGTATTTCTGTCAAGCTaGATGCTTTCTGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENVFLSS*MLSERV
Trigger: TACTCTCTCAGAAAGCATGCAGCTTGACAGAAATAC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTAACGCAACCACTCTTTaGCCTCTTCTTGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVNATTL*PLLGWP
Trigger: AGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAGTAAAGAGAAGAAGTaGTGGACACCAGTGATAATG +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSKEKK*WTPVIM
Trigger: CATTATCACTGGTGTCCAGCACTTCTTCTCTTTACT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCGCTCTTTTCAAAAGCTaGTACAAGGTGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPALFKS*YKVSIC
Trigger: GCAAATGCTCACCTTGTAGCAGCTTTTGAAAAGAGC...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGTCATAGTTAGACTTTaGAATCGGCCAGTCATATTC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENVIVRL*NRPVIF
Trigger: GAATATGACTGGCCGATTGCAAAGTCTAACTATGAC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGTCATAGTTAGACTTTaGAATCGGCCAGTCATATTC +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASVIVRL*NRPVIF
Trigger: GAATATGACTGGCCGATTGCAAAGTCTAACTATGAC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCTGCCTCAGCTTCTGTaGATTCACAGATCCGAGATC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVLPQLL*IHRSEI
Trigger: GATCTCGGATCTGTGAATGCACAGAAGCTGAGGCAG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCATTTCAATTTCATTCTaGATCCGGTTCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTISISF*IRFMAS
Trigger: GGAAGCCATGAACCGGATGCAGAATGAAATTGAAAT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCGGATCCTATCAAATATaGCTGAGATTTTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETGSYQI*LRFLVL
Trigger: AAGGACCAAAAATCTCAGGCATATTTGATAGGATCC...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATTCTTCGAAGATATCTaGCTAAAAAGCCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKFFEDI*LKSLSL
Trigger: CAGTGAAAGGCTTTTTAGGCAGATATCTTCGAAGAA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTTCTTCGAAGATATCTaGCTAAAAAGCCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETFFEDI*LKSLSL
Trigger: CAGTGAAAGGCTTTTTAGGCAGATATCTTCGAAGAA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCACAGCTTTGAGGGTTTaGATTCTGTATTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETTALRV*ILYLFA
Trigger: TGCAAACAAATACAGAATGCAAACCCTCAAAGCTGT...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAACAGCTTTGAGGGTTTaGATTCTGTATTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKTALRV*ILYLFA
Trigger: TGCAAACAAATACAGAATGCAAACCCTCAAAGCTGT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTCACCCTAGAGGGCCCTaGAAGCCTAGTAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSHPRGP*KPSRLF
Trigger: AAAAAGCCTACTAGGCTTCCAGGGCCCTCTAGGGTG...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACGATTGAGGTCCTTTaGAGGAATCTTTTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENTIEVL*RNLFRF
Trigger: GAAACGAAAAAGATTCCTCCAAAGGACCTCAATCGT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGGAAGTTGCTGTGTCTaGTATTCGGTTCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAGSCCV*YSVQTS
Trigger: AGAAGTCTGAACCGAATACCAGACACAGCAACTTCC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATCTTAGTCCCTTTTTaGGTAGTGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEILVPF*VVYFCQ
Trigger: TTGACAGAAATACACTACCCAAAAAGGGACTAAGAT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCTTTTTCTTCTTCTTaGAGTCGGCATCATTACCAC +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISFSSS*SRHHYH
Trigger: GTGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCATGAAGGAGGCTTGGTaGACTTTTTCTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAMKEAW*TFSSQR
Trigger: CCTTTGGGAAGAAAAAGTCCACCAAGCCTCCTTCAT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTCTGCATCCGGTTCATaGCTTCCCGGATCTGATCAA +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFSASGS*LPGSDQ
Trigger: TTGATCAGATCCGGGAAGCCATGAACCGGATGCAGA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGTACCTTTGGGTAATTaGTTTAGGAATCAGCGTATC +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASVPLGN*FRNQRI
Trigger: GATACGCTGATTCCTAAACCAATTACCCAAAGGTAC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGAATTATTACAACTaGGAGCTCCACTCCATTATT +
Preference number: 4 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEKNYYN*ELHSII
Trigger: AATAATGGAGTGGAGCTCCCAGTTGTAATAATTCTT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCAACCTTCTACATCCATaGGGCAAGGAAGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFNLLHP*GKEGIV
Trigger: GACTATTCCTTCCTTGCCCCATGGATGTAGAAGGTT...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGGAGGACTGGCCTCTTaGATTTGTTCTGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSGGLAS*ICSGMG
Trigger: CCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGGAGGACTGGCCTCTTaGATTTGTTCTGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFGGLAS*ICSGMG
Trigger: CCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCACAGTAGTGTTTTTCTaGTGGTTGCACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPTVVFF*WLHNSI
Trigger: AATGGAATTGTGCAACCACCAGAAAAACACTACTGT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTCACTTAGAACTGGATaGAATTTCGCCACATGTCTT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSLRTG*NFATCL
Trigger: AAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTGCTTCCAGCCCTGCTaGATAATAATTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: CNLASWRFRLSSAASLETCFQPC*IIIQNL
Trigger: AAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGACACCTGAAGACGATTaGGGTCCTTTGGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQTPEDD*GPLEES
Trigger: AGATTCCTCCAAAGGACCTCAATCGTCTTCAGGTGT...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACGGGACTGCTATTTGTTaGGCCACCACTATTCAGACC +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYGTAIC*ATTIQT
Trigger: GGTCTGAATAGTGGTGGCTCAACAAATAGCAGTCCC...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGATCCTTCTCTTCTTTaGCTGGTTTTTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGDPSLL*LVFQCK
Trigger: TTTGCACTGAAAAACCAGTCAAAGAAGAGAAGGATC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGAATCTGTCCTCAGCTaGGTATTCTTCCTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFESVLS*VFFLEG
Trigger: CCCCTCTAGGAAGAATACTCAGCTGAGGACAGATTC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTAGGTGATCATGGCAGATaGCCCTACTCCACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLGDHGR*PYSTWF
Trigger: AAACCAAGTGGAGTAGGGTCATCTGCCATGATCACC...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCAAGCTGCATGCTTTCTaGGAGAGTAGATCTCACACT +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLKLHAF*ESRSHT
Trigger: AGTGTGAGATCTACTCTCTCAGAAAGCATGCAGCTT...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGATAATGAAGAGCCATaGACTTCTTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVADNEEP*TSSMLS
Trigger: AGACAGCATGGAAGAAGTTCATGGCTCTTCATTATC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGGGCTTCATGGATGCTaGGCCACAGTCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFGLHGC*ATVTSI
Trigger: AATGCTGGTGACTGTGGCTCAGCATCCATGAAGCCC...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGAGAGTATAATTCTGTaGTGCTCCATCAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTESIIL*CSINKL
Trigger: TAACTTGTTGATGGAGCATCACAGAATTATACTCTC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTGCAATTCCTTACTTaGCTTGTGGTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLQFLT*LVVHIK
Trigger: TTTAATGTGGACCACAAGTCAAGTAAGGAATTGCAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTTGCGGAATGTGCTTTaGGGTTGTGGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVLRNVL*GCGFLS
Trigger: ACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTTGCGGAATGTGCTTTaGGGTTGTGGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFLRNVL*GCGFLS
Trigger: ACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCAGGGTCCTTTCCAGTTaGGTAATGGAGCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFARVLSS*VMELSI
Trigger: AATAGAAAGCTCCATTACTCAACTGGAAAGGACCCT...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACTGTTCTGGAATGGGGTaGGCGCACAACACAAACACT +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYCSGMG*AHNTNT
Trigger: AGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACA...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGACTTTGTGACACTCTaGAAACTGCACAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFDFVTL*KLHRCF
Trigger: GAAACATCTGTGCAGTTTTCAGAGTGTCACAAAGTC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGCTTCAAAGTCAGGGTaGCAATTCTATGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGASKSG*QFYVHK
Trigger: TTTATGCACATAGAATTGTCACCCTGACTTTGAAGC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGCAGTACTGGGAGGCTaGACGTTACCATTTACACCT +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSAVLGG*TLPFTP
Trigger: AGGTGTAAATGGTAACGTGCAGCCTCCCAGTACTGC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCCTTAGGGATCAAGCTTaGAATTTTGGAGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASLRDQA*NFGGLF
Trigger: AAAAAGACCTCCAAAATTGCAAGCTTGATCCCTAAG...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCCAGGTGAAATGGTTTaGTTTACTGTTGGAACTTTA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENPGEMV*FTVGTL
Trigger: TAAAGTTCCAACAGTAAAGCAAACCATTTCACCTGG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR GCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTCCTGTAAATGAATGGTaGCACTGTCGCGGTATTCGG +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFPVNEW*HCRGIR
Trigger: CCGAATACCGCGACAGTGGCACCATTCATTTACAGG...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGTCTCTTCTAAATTCTaGCTCAAGTCTGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: VRALDRVLLYWQWFSENTVSSKF*LKSAMF
Trigger: AAACATAGCAGACTTGAGGCAGAATTTAGAAGAGAC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTATGTTGTCTCCAGGGTaGTGTGGCTTATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSMLSPG*CGLSES
Trigger: GGACTCAGATAAGCCACAGCACCCTGGAGACAACAT...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGATGTCCCGGGAAGTTaGTGTGTCTGGTATTCGGTT +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFDVPGS*CVWYSV
Trigger: AACCGAATACCAGACACAGCAACTTCCCGGGACATC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGCCACTTGTTATGGTTaGTCCACTGCTGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLATCYG*STAGDH
Trigger: ATGATCACCAGCAGTGGAGCAACCATAACAAGTGGC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTAATTTTACCCAGTGTTaGAGAGCCACTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFNFTQC*RATCYG
Trigger: ACCATAACAAGTGGCTCTGCAACACTGGGTAAAATT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFSSWLA*RDDGVY
Trigger: ATATACCCCATCATCTCGGCAGGCCAACCAAGAAGA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTAACGCAACCACTCTTTaGCCTCTTCTTGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFNATTL*PLLGWP
Trigger: AGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGCTCTTTTCAAAAGCTaGTACAAGGTGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFALFKS*YKVSIC
Trigger: GCAAATGCTCACCTTGTAGCAGCTTTTGAAAAGAGC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCGTCATAGTTAGACTTTaGAATCGGCCAGTCATATTC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPVIVRL*NRPVIF
Trigger: GAATATGACTGGCCGATTGCAAAGTCTAACTATGAC...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATCAGTTTGCGGAATGTaGTTTGAGGTTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLSVCGM*FEVVAS
Trigger: GGAAGCCACAACCTCAAAGCACATTCCGCAAACTGA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCCTTCTGTGTCAGTTTaGGGAATGTGCTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLPSVSV*GMCFEV
Trigger: AACCTCAAAGCACATTCCGCAAACTGACACAGAAGG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGTTTTTCTGGTGGTTaGACAATTCCATTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENCFSGG*TIPFVL
Trigger: AAGCACAAATGGAATTGTGCAACCACCAGAAAAACA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTGTTTTTCTGGTGGTTaGACAATTCCATTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASCFSGG*TIPFVL
Trigger: AAGCACAAATGGAATTGTGCAACCACCAGAAAAACA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTAGCACTGATAGCTCCTaGATAGTCAAAAACAACTGT +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGSTDSS*IVKNNC
Trigger: ACAGTTGTTTTTGACTATGCAGGAGCTATCAGTGCT...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCCCTACTGGGATGTATTaGAGGAAATTCTGTTTATGC +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPPTGMY*RKFCLC
Trigger: GCATAAACAGAATTTCCTGCAATACATCCCAGTAGG...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACTTCTCTTCTTTGACTaGTTTTTCAGTGCAAACTTT +
Preference number: 4 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKLLFFD*FFSANF
Trigger: AAAGTTTGCACTGAAAAACCAGTCAAAGAAGAGAAG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTAGGTCTCGTCTGTGGTaGAGCGTTTCTCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFRSRLW*SVSLNL
Trigger: CAGATTCAGAGAAACGCTCCACCACAGACGAGACCT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGGAATCAATACTGCTaGTACTGGATCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVWNQYC*YWICGL
Trigger: GAGGCCACAGATCCAGTACCAGCAGTATTGATTCCA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTAGGTGGGGCTGGATTTaGGGGAACCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFRWGWI*GNLTKK
Trigger: TTTCTTTGTCAGGTTCCCCCAAATCCAGCCCCACCT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTGAGACAAATTTGTTaGGCTCACCAAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLRQIC*AHQVRK
Trigger: TTTTCTAACTTGGTGAGCCCAACAAATTTGTCTCAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTTCTTTTTCTTCTTCTTaGAGTCGGCATCATTACCAC +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGSFSSS*SRHHYH
Trigger: GTGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGA...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGGCACTTCTAGGTTATaGGATCTAATTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFGTSRL*DLIKSP
Trigger: AGGAGACTTAATTAGATCCCATAACCTAGAAGTGCC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGTACCTTTGGGTAATTaGTTTAGGAATCAGCGTATC +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGVPLGN*FRNQRI
Trigger: GATACGCTGATTCCTAAACCAATTACCCAAAGGTAC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCAAGAATTATTACAACTaGGAGCTCCACTCCATTATT +
Preference number: 4 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAKNYYN*ELHSII
Trigger: AATAATGGAGTGGAGCTCCCAGTTGTAATAATTCTT...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTAAAATGTCTTCATGGTaGCTGGTGCTTTCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFKMSSW*LVLSLS
Trigger: CGACAGCGAAAGCACCAGCCACCATGAAGACATTTT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCTGGCACAAAGGAGGTTaGACAGATCAGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLWHKGG*TDQKDG
Trigger: TCCATCTTTCTGATCTGTCCAACCTCCTTTGTGCCA...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGGATTTGTTCTGGAATaGGGTGAGCGCACAACACAA +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQGFVLE*GERTTQ
Trigger: TTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCTCTTGGATTTGTTCTaGAATGGGGTGAGCGCACAA +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVLLDLF*NGVSAQ
Trigger: TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGTGCTTATGGAGGACTaGCCTCTTGGATTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVVLMED*PLGFVL
Trigger: CAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACACATCATGAGAACGTaGCAGTTAGAATTAAATTGG +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIHIMRT*QLELNW
Trigger: CCAATTTAATTCTAACTGCCACGTTCTCATGATGTG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTATATCTTCGAAATGTaGGTGAGGCAATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENYIFEM*VRQYLD
Trigger: ATCCAGATATTGCCTCACCCACATTTCGAAGATATA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552895.5
3UTR CAA 72 bp GGAGCACATCATGAGAACGTGGCAGTTAGAATTAAATaGGCACTTCTCCAGTTTGCCACAGTAGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GAHHENVAVRIK*ALLQFATVVFF
Trigger: GAAAAACACTACTGTGGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR CAA 72 bp CTAGCCCTTGGGTTTCATAAACTTAAAACCTGTCCTTaGTGTGTGGTGGTAACTTCTCCAATGACTGATCAG +
Preference number: 4 (lower is better)
Translates to: LALGFHKLKTCP*CVVVTSPMTDQ
Trigger: CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTTATGAAACCCAAGGGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTACTCATGTCAATCTGTaGCATGTTTCCCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVTHVNL*HVSQPR
Trigger: TCTAGGCTGGGAAACATGTCACAGATTGACATGAGT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR TCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTCCGGGAAGGTTAAACTaGGACAAATTTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSPGRLN*DKFVGL
Trigger: GAGCCCAACAAATTTGTCTCAGTTTAACCTTCCCGG...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCCGGGAAGGTTAAACTaGGACAAATTTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFPGRLN*DKFVGL
Trigger: GAGCCCAACAAATTTGTCTCAGTTTAACCTTCCCGG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGCATTTGCTGAAAGCTaGGATGTGAGGGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSAFAES*DVRVAT
Trigger: AGTTGCTACCCTCACATCTCAGCTTTCAGCAAATGC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGAGAGTATAATTCTGTaGTGCTCCATCAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFESIIL*CSINKL
Trigger: TAACTTGTTGATGGAGCATCACAGAATTATACTCTC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTTGCAATTCCTTACTTaGCTTGTGGTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: SLAIPCAICSVALSLGSFLQFLT*LVVHIK
Trigger: TTTAATGTGGACCACAAGTCAAGTAAGGAATTGCAA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTAAGTTGCATATCTGGCTaGCAGACTGGACTGCATATC +
Preference number: 4 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLSCISG*QTGLHI
Trigger: GATATGCAGTCCAGTCTGGCAGCCAGATATGCAACT...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGTGGCTGTACTTGACTaGTTTACAGTCAACATGGTG +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQVAVLD*FTVNMV
Trigger: CACCATGTTGACTGTAAAGCAGTCAAGTACAGCCAC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATTCTGCCTCAAGTCTaGTATGTTTTTAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: WVRALDRVLLYWQWFSENILPQV*YVFNCS
Trigger: AGAACAGTTAAAAACATAGCAGACTTGAGGCAGAAT...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR GCA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGATTCTGCCTCAAGTCTaGTATGTTTTTAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: IPCAICSVALSLGSFPVEILPQV*YVFNCS
Trigger: AGAACAGTTAAAAACATAGCAGACTTGAGGCAGAAT...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGTCCAGGTCACTGCTTaGTTTCTCACTCATGTCAAT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLVQVTA*FLTHVN
Trigger: ATTGACATGAGTGAGAAAGCAAGCAGTGACCTGGAC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTCCCTTCATCTCCACTaGTTTTTCCTGCATCTGAAG +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFSLHLH*FFLHLK
Trigger: CTTCAGATGCAGGAAAAAGCAGTGGAGATGAAGGGA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTACGTTGGAATCAATACTaGTGGTACTGGATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLRWNQY*WYWICG
Trigger: GCCACAGATCCAGTACCAGCAGTATTGATTCCAACG...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCATTTCAATTTCATTCTaGATCCGGTTCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAISISF*IRFMAS
Trigger: GGAAGCCATGAACCGGATGCAGAATGAAATTGAAAT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGAAAGTCCTAATGACTaGCTGGAAGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVESPND*LEDEEE
Trigger: CTCCTCTTCATCTTCCAGGCAGTCATTAGGACTTTC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGGATCCTATCAAATATaGCTGAGATTTTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGGSYQI*LRFLVL
Trigger: AAGGACCAAAAATCTCAGGCATATTTGATAGGATCC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGTTTGGCTATCCCATGTaGAATCTGTTCAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQFGYPM*NLFSCP
Trigger: AGGGCAACTGAACAGATTGCACATGGGATAGCCAAA...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATTTGGCTATCCCATGTaGAATCTGTTCAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLFGYPM*NLFSCP
Trigger: AGGGCAACTGAACAGATTGCACATGGGATAGCCAAA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGCACAATTCCATTTGTaGTTATGGAGGACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSAQFHL*LWRTGL
Trigger: GAGGCCAGTCCTCCATAAGCACAAATGGAATTGTGC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCACTCTCTTTAAAGCCTaGCATGACAGATGTACTTTC +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFTLFKA*HDRCTF
Trigger: GAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGT...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCAGGAAATTCTGTTTATaGTCATGTTTGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SFHCNLASWRFRLSSAASRKFCL*SCLDCV
Trigger: AACACAGTCCAAACATGAGCATAAACAGAATTTCCT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCATTTGCAATAATCTaGATGATTTCTGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISFAII*MISARS
Trigger: ACTCCTAGCAGAAATCATCCAGATTATTGCAAATGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCTTTCTCAGAAGCTTTaGCATCATCGGTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFLSQKL*HHRFSR
Trigger: CCGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTATTTGCCACCTGCCTTaGCACCAAACAACCTTCGAA +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSICHLP*HQTTFE
Trigger: TTCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAAT...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCCTGAGACAAATTTGTTaGGCTCACCAAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPLRQIC*AHQVRK
Trigger: TTTTCTAACTTGGTGAGCCCAACAAATTTGTCTCAG...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTAGATCTTTGGGAGGATaGTCTGGACCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFRSLGG*SGPFSA
Trigger: AGCACTGAATGGTCCAGACCATCCTCCCAAAGATCT...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACTACCACTGCCAATACTaGAATGGCTTGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYYHCQY*NGLWHC
Trigger: ACAGTGCCACAAGCCATTCCAGTATTGGCAGTGGTA...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGGCACTTCTAGGTTATaGGATCTAATTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAGTSRL*DLIKSP
Trigger: AGGAGACTTAATTAGATCCCATAACCTAGAAGTGCC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGTACCTTTGGGTAATTaGTTTAGGAATCAGCGTATC +
Preference number: 4 (lower is better)
Translates to: AHHENVAVRIKLALLQFAVPLGN*FRNQRI
Trigger: GATACGCTGATTCCTAAACCAATTACCCAAAGGTAC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTAAAATGTCTTCATGGTaGCTGGTGCTTTCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSKMSSW*LVLSLS
Trigger: CGACAGCGAAAGCACCAGCCACCATGAAGACATTTT...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTAAGGGAGTGGGCAGGTaGTTTAAAAAGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFKGVGR*FKKTTV
Trigger: CACAGTGGTCTTTTTAAACCACCTGCCCACTCCCTT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGAAGAAGTCTATACCATaGCCTAGCCCTTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQKKSIP*PSPWVS
Trigger: TGAAACCCAAGGGCTAGGCCATGGTATAGACTTCTT...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTACTCATGTCAATCTGTaGCATGTTTCCCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSTHVNL*HVSQPR
Trigger: TCTAGGCTGGGAAACATGTCACAGATTGACATGAGT...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR TCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAATCATCCTGATTCTGTaGACCGTCCAAACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLIILIL*TVQTGF
Trigger: AAAACCAGTTTGGACGGTTCACAGAATCAGGATGAT...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGGATTTGCTCTGAATaGGCCTTTTCTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVWICSE*AFSSAV
Trigger: TACAGCTGAAGAAAAGGCTCATTCAGAGCAAATCCA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR TCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGAGAGTATAATTCTGTaGTGCTCCATCAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFESIIL*CSINKL
Trigger: TAACTTGTTGATGGAGCATCACAGAATTATACTCTC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCTTCACTGGTTCTGTATaGTTTGCACATAATACCCAC +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLFTGSV*FAHNTH
Trigger: GTGGGTATTATGTGCAAATCATACAGAACCAGTGAA...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGCGTGTAAGGACCTATTaGCTTTGTGACACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQRVRTY*LCDTLK
Trigger: TTTCAGAGTGTCACAAAGTCAATAGGTCCTTACACG...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTATCTCCTCCAGGCACTaGTTAGCAGTCTTACTATAT +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFISSRH*LAVLLY
Trigger: ATATAGTAAGACTGCTAAGCAGTGCCTGGAGGAGAT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCATTCTGCCTCAAGTCTaGTATGTTTTTAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPILPQV*YVFNCS
Trigger: AGAACAGTTAAAAACATAGCAGACTTGAGGCAGAAT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR GCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGATCTTCCCATGGTGTaGGTTTCCCATACATCTGAA +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSDLPMV*VSHTSE
Trigger: TTCAGATGTATGGGAAACGCACACCATGGGAAGATC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGGCACTTCTCCAGTTTaGCACAGTAGTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFGTSPV*HSSVFL
Trigger: CAGAAAAACACTACTGTGGCAAACTGGAGAAGTGCC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACGGCACTTCTCCAGTTTaGCACAGTAGTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYGTSPV*HSSVFL
Trigger: CAGAAAAACACTACTGTGGCAAACTGGAGAAGTGCC...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTCTTTTCTTTCTTGCTaGCTGGGATTCATATTCATT +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPSFLSC*LGFIFI
Trigger: AATGAATATGAATCCCAGCCAGCAAGAAAGAAAAGA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCAAGAATTATTACAACTaGGAGCTCCACTCCATTATT +
Preference number: 4 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPKNYYN*ELHSII
Trigger: AATAATGGAGTGGAGCTCCCAGTTGTAATAATTCTT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTGGCACAAAGGAGGTTaGACAGATCAGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFWHKGG*TDQKDG
Trigger: TCCATCTTTCTGATCTGTCCAACCTCCTTTGTGCCA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGGCTACTATGTTAACTaGTGTTGCTTGGTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAGYYVN*CCLVVN
Trigger: ATTTACAACCAAGCAACACCAGTTAACATAGTAGCC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACAAGAAGTCTATACCATaGCCTAGCCCTTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYKKSIP*PSPWVS
Trigger: TGAAACCCAAGGGCTAGGCCATGGTATAGACTTCTT...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCTGCACAGATGTTTCGTaGTGTTGTTGTTCTATAGCA +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLCTDVS*CCCSIA
Trigger: TGCTATAGAACAACAACACCACGAAACATCTGTGCA...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTACTAGGTGGACCTACTaGGATGTATTGCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVTRWTY*DVLQEI
Trigger: AATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCAGATAATACAGCTTTaGGGGTTTGCATTCTGTATT +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLQIIQL*GFAFCI
Trigger: AATACAGAATGCAAACCCTCAAAGCTGTATTATCTG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTCTTCATGTACAGTTTTaGAGCATGCTCACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFLHVQF*SMLTLA
Trigger: TGCTAGAGTGAGCATGCTTCAAAACTGTACATGAAG...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGTTTCACAACAGATTTaGTCCATGTTTGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLVSQQI*SMFEAS
Trigger: TGAAGCCTCAAACATGGATCAAATCTGTTGTGAAAC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACTCTTCGAAATGTGGGTaGGGCAATATCTGGATACTT +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYSSKCG*GNIWIL
Trigger: AAGTATCCAGATATTGCCTCACCCACATTTCGAAGA...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552895.5
CDS-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGACAACTAGAAGCACTTaGTTTCTCCATGGTTATAGG +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQTTRST*FLHGYR
Trigger: CCTATAACCATGGAGAAAGCAAGTGCTTCTAGTTGT...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACACACTTTCAGAGGAATaGTGTCTTCTGATGCGAAGA +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYTLSEE*CLLMRR
Trigger: TCTTCGCATCAGAAGACAGCATTCCTCTGAAAGTGT...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTATGTGTTACCAGTTTCTaGCTTCAACCGGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLCVTSF*LQPVIF
Trigger: GAAAATGACCGGTTGAAGGCAGAAACTGGTAACACA...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCTGTCGCAGCTTTGTGTaGTCGAGTAATTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFCRSFV*SSNWLL
Trigger: AAGCAGCCAATTACTCGAGCACACAAAGCTGCGACA...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGAAGTTAAGCTTCCATTaGAATTTAGCATCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQKLSFH*NLASWR
Trigger: CCGCCAAGATGCTAAATTGCAATGGAAGCTTAACTT...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCTACCCAGTAGACTGTaGAAATCTAACCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLLPSRL*KSNLLL
Trigger: TAAAAGAAGGTTAGATTTGCACAGTCTACTGGGTAG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTAGTAGTGCCAAGATTTaGTATCGGAAGAGCAGTATG +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFSSAKI*YRKSSM
Trigger: CATACTGCTCTTCCGATACCAAATCTTGGCACTACT...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCTCATTTGCAATAATCTaGATGATTTCTGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFSFAII*MISARS
Trigger: ACTCCTAGCAGAAATCATCCAGATTATTGCAAATGA...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTACGATTGAGGTCCTTTaGAGGAATCTTTTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVTIEVL*RNLFRF
Trigger: GAAACGAAAAAGATTCCTCCAAAGGACCTCAATCGT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCTGAGACAAATTTGTTaGGCTCACCAAGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLLRQIC*AHQVRK
Trigger: TTTTCTAACTTGGTGAGCCCAACAAATTTGTCTCAG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTTCCTTACTTGACTTGTaGTCCACATTAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFSLLDL*STLKVA
Trigger: TGCCACTTTTAATGTGGACCACAAGTCAAGTAAGGA...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCAAGAATTATTACAACTaGGAGCTCCACTCCATTATT +
Preference number: 4 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAKNYYN*ELHSII
Trigger: AATAATGGAGTGGAGCTCCCAGTTGTAATAATTCTT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATCACTTAGAACTGGATaGAATTTCGCCACATGTCTT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLSLRTG*NFATCL
Trigger: AAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGCACAGATGTTTCGTaGTGTTGTTGTTCTATAGCA +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVCTDVS*CCCSIA
Trigger: TGCTATAGAACAACAACACCACGAAACATCTGTGCA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCTGTGTTTCTCAAAATaGCAGGGAAAGATTAGCAAT +
Preference number: 4 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLLCFSK*QGKISN
Trigger: ATTGCTAATCTTTCCCTGCCATTTTGAGAAACACAG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCCTGGAGGCCAACGAGTaGCTTAAGCTTATAACATCT +
Preference number: 4 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFLEANE*LKLITS
Trigger: AGATGTTATAAGCTTAAGTCACTCGTTGGCCTCCAG...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACAGTAAAGAGAAGAAGTaGTGGACACCAGTGATAATG +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYSKEKK*WTPVIM
Trigger: CATTATCACTGGTGTCCAGCACTTCTTCTCTTTACT...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTAGTAAAGAGAAGAAGTaGTGGACACCAGTGATAATG +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFSKEKK*WTPVIM
Trigger: CATTATCACTGGTGTCCAGCACTTCTTCTCTTTACT...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACGTCATAGTTAGACTTTaGAATCGGCCAGTCATATTC +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYVIVRL*NRPVIF
Trigger: GAATATGACTGGCCGATTGCAAAGTCTAACTATGAC...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACATTTCAATTTCATTCTaGATCCGGTTCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYISISF*IRFMAS
Trigger: GGAAGCCATGAACCGGATGCAGAATGAAATTGAAAT...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGTGTTTTTCTGGTGGTTaGACAATTCCATTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQCFSGG*TIPFVL
Trigger: AAGCACAAATGGAATTGTGCAACCACCAGAAAAACA...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCTACCCAGTAGACTGTaGAAATCTAACCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVLPSRL*KSNLLL
Trigger: TAAAAGAAGGTTAGATTTGCACAGTCTACTGGGTAG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCCTACTGGGATGTATTaGAGGAAATTCTGTTTATGC +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFPTGMY*RKFCLC
Trigger: GCATAAACAGAATTTCCTGCAATACATCCCAGTAGG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACAAAGAGAAGAAGTGCTaGACACCAGTGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYKEKKC*TPVIMK
Trigger: CTTCATTATCACTGGTGTCCAGCACTTCTTCTCTTT...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTAAAGAGAAGAAGTGCTaGACACCAGTGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFKEKKC*TPVIMK
Trigger: CTTCATTATCACTGGTGTCCAGCACTTCTTCTCTTT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTCTTTTTCTTCTTCTTaGAGTCGGCATCATTACCAC +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFSFSSS*SRHHYH
Trigger: GTGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CCA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTCAGTTAGAATTAAATTaGCACTTCTCCAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFQLELN*HFSSLP
Trigger: TGGCAAACTGGAGAAGTGCCAATTTAATTCTAACTG...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGGCTACTATGTTAACTaGTGTTGCTTGGTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQGYYVN*CCLVVN
Trigger: ATTTACAACCAAGCAACACCAGTTAACATAGTAGCC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTACTGTGTTTCTCAAAATaGCAGGGAAAGATTAGCAAT +
Preference number: 4 (lower is better)
Translates to: CLLKLFHLELDGISPHVLLCFSK*QGKISN
Trigger: ATTGCTAATCTTTCCCTGCCATTTTGAGAAACACAG...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
3UTR CAA 72 bp TACTTATCCAAAAATATATTGGCTTCATGTACAGTTTaGAAGCATGCTCACTCTAGCACTGATAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: YLSKNILASCTV*KHAHSSTDSSC
Trigger: GCAGGAGCTATCAGTGCTAGAGTGAGCATGCTTCAAAACTGTACATGAAGCCAATATATTTTTGGATAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACGAGAGTATAATTCTGTaGTGCTCCATCAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYESIIL*CSINKL
Trigger: TAACTTGTTGATGGAGCATCACAGAATTATACTCTC...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR TCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTTGCAATTCCTTACTTaGCTTGTGGTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFLQFLT*LVVHIK
Trigger: TTTAATGTGGACCACAAGTCAAGTAAGGAATTGCAA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACGTCTCTTCTAAATTCTaGCTCAAGTCTGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYVSSKF*LKSAMF
Trigger: AAACATAGCAGACTTGAGGCAGAATTTAGAAGAGAC...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR GCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGGATCCTATCAAATATaGCTGAGATTTTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFGSYQI*LRFLVL
Trigger: AAGGACCAAAAATCTCAGGCATATTTGATAGGATCC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR GCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTTTCTTCGAAGATATCTaGCTAAAAAGCCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSFFEDI*LKSLSL
Trigger: CAGTGAAAGGCTTTTTAGGCAGATATCTTCGAAGAA...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTATTCTTTCTTGCTGGCTaGGATTCATATTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLFFLAG*DSYSFS
Trigger: TGAGAATGAATATGAATCCCAGCCAGCAAGAAAGAA...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCTTCTCTTCTTTGACTaGTTTTTCAGTGCAAACTTT +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVLLFFD*FFSANF
Trigger: AAAGTTTGCACTGAAAAACCAGTCAAAGAAGAGAAG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCTGGAACTTTAGAGCCTaGTTTTGGAATACCACTGGA +
Preference number: 4 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFWNFRA*FWNTTG
Trigger: TCCAGTGGTATTCCAAAACCAGGCTCTAAAGTTCCA...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTATCTTAGTCCCTTTTTaGGTAGTGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVILVPF*VVYFCQ
Trigger: TTGACAGAAATACACTACCCAAAAAGGGACTAAGAT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CCA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTAACAGTAGTGTTTTTCTaGTGGTTGCACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLTVVFF*WLHNSI
Trigger: AATGGAATTGTGCAACCACCAGAAAAACACTACTGT...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTCACATCATGAGAACGTaGCAGTTAGAATTAAATTGG +
Preference number: 4 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSHIMRT*QLELNW
Trigger: CCAATTTAATTCTAACTGCCACGTTCTCATGATGTG...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGGCTACTATGTTAACTaGTGTTGCTTGGTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFGYYVN*CCLVVN
Trigger: ATTTACAACCAAGCAACACCAGTTAACATAGTAGCC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
3UTR CAA 72 bp CCAGATAATACAGCTTTGAGGGTTTGCATTCTGTATTaGTTTGCAATGTACAGGAAATCTCAGCAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: PDNTALRVCILY*FAMYRKSQQVK
Trigger: TTTCACTTGCTGAGATTTCCTGTACATTGCAAACAAATACAGAATGCAAACCCTCAAAGCTGTATTATCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR GCA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTAGGAAATTCTGTTTATaGTCATGTTTGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: LKLFHLELDGISPHVLGFRKFCL*SCLDCV
Trigger: AACACAGTCCAAACATGAGCATAAACAGAATTTCCT...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CCA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCTCCTTCCTTTCAATTaGACTTCATATTGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFLLPFN*TSYCLV
Trigger: AACAAGACAATATGAAGTCCAATTGAAAGGAAGGAG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CCA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCCCAAGTACTTATTGTTaGGGCTTTACAAAGACTACA +
Preference number: 4 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFPSTYC*GFTKTT
Trigger: TGTAGTCTTTGTAAAGCCCCAACAATAAGTACTTGG...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS GCA 90 bp GAGGCCCACCGTCTTGGAACCGCGCGGGATGGACGGAGCGGGCCCTaGGAGAAAAGTTTCCTGCGGGAACGGCGGGAGGAGCGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: EAHRLGTARDGRSGP*EKSFLRERREERLR
Trigger: CCTCAGGCGCTCCTCCCGCCGTTCCCGCAGGAAACTTTTCTCGCAGGGCCCGCTCCGTCCATCCCGCGCGGTTCCAAGACGGTGGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CCA 90 bp CAGCCGGCCTGGGCGGCGAGTGGCGCTGTTTCCCAGCCGCGCAGCTaGAATTTAAAGAGACAGGCGCGTCGCGGGGTCTGGGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QPAWAASGAVSQPRS*NLKRQARRGVWALA
Trigger: GGCAAGGGCCCAGACCCCGCGACGCGCCTGTCTCTTTAAATTCCAGCTGCGCGGCTGGGAAACAGCGCCACTCGCCGCCCAGGCCGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CCA 90 bp AGCCGGGAGCGAAAGCGCGAGCTCGCTCTCAGCCTCCAGCCGGCCTaGGCGGCGAGTGGCGCTGTTTCCCAGCCGCGCAGCTGGAATTTA +
Preference number: 5 (lower is better)
Translates to: SRERKRELALSLQPA*AASGAVSQPRSWNL
Trigger: TAAATTCCAGCTGCGCGGCTGGGAAACAGCGCCACTCGCCGCCCAGGCCGGCTGGAGGCTGAGAGCGAGCTCGCGCTTTCGCTCCCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS GCA 90 bp AGAGAGGGCTGCTGCTGCCGCTTAGCCCACCAGCACTGCCCATGCTaGCCGTACCGGACGACGGTGACTCCAGACTGCCTTGCCGCGCTA +
Preference number: 5 (lower is better)
Translates to: REGCCCRLAHQHCPC*PYRTTVTPDCLAAL
Trigger: TAGCGCGGCAAGGCAGTCTGGAGTCACCGTCGTCCGGTACGGGCAGCATGGGCAGTGCTGGTGGGCTAAGCGGCAGCAGCAGCCCTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 90 bp CAGCTGGAATTTAAAGAGACAGGCGCGTCGCGGGGTCTGGGCCCTTaGCCAGGAGAGGAGCCCACGGGAGGCCCACCGTCTTGGAACCGC +
Preference number: 5 (lower is better)
Translates to: QLEFKETGASRGLGP*PGEEPTGGPPSWNR
Trigger: GCGGTTCCAAGACGGTGGGCCTCCCGTGGGCTCCTCTCCTGGGCAAGGGCCCAGACCCCGCGACGCGCCTGTCTCTTTAAATTCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS GCA 90 bp GCCAGCACCCAGGGAGGGAGCATCTCCCGCCTGAAGTCGCGGACATaGCTGGCCCAACCTCCAGGTCATGGGGGTGGGTCGACTTGTCAA +
Preference number: 5 (lower is better)
Translates to: ASTQGGSISRLKSRT*LAQPPGHGGGSTCQ
Trigger: TTGACAAGTCGACCCACCCCCATGACCTGGAGGTTGGGCCAGGCATGTCCGCGACTTCAGGCGGGAGATGCTCCCTCCCTGGGTGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CCA 90 bp AAAGCGCGAGCTCGCTCTCAGCCTCCAGCCGGCCTGGGCGGCGAGTaGCGCTGTTTCCCAGCCGCGCAGCTGGAATTTAAAGAGACAGGC +
Preference number: 5 (lower is better)
Translates to: KARARSQPPAGLGGE*RCFPAAQLEFKETG
Trigger: GCCTGTCTCTTTAAATTCCAGCTGCGCGGCTGGGAAACAGCGCCACTCGCCGCCCAGGCCGGCTGGAGGCTGAGAGCGAGCTCGCGCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CCA 90 bp AAAAACCAACCGAGGCACATTCTTGTCACCCAGAAAGAAACTGCTTaGGCCGCTGAGAGCGGGTGCGGGACCGGGCGCGGGACCGGGCGC +
Preference number: 5 (lower is better)
Translates to: KNQPRHILVTQKETA*AAESGCGTGRGTGR
Trigger: GCGCCCGGTCCCGCGCCCGGTCCCGCACCCGCTCTCAGCGGCCCAAGCAGTTTCTTTCTGGGTGACAAGAATGTGCCTCGGTTGGTTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS GCA 90 bp CTGCCCATGCTGCCCGTACCGGACGACGGTGACTCCAGACTGCCTTaGCGCGCTAATGTGGTACTAGGGCTGGGCATTACTGAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: LPMLPVPDDGDSRLP*RANVVLGLGITEED
Trigger: ATCTTCCTCAGTAATGCCCAGCCCTAGTACCACATTAGCGCGGCAAGGCAGTCTGGAGTCACCGTCGTCCGGTACGGGCAGCATGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTGGCTGCCTGAGACCTaGTGCACCACAGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDWLPET*CTTGAG
Trigger: GCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAGCCA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS TCA 90 bp GGTGTGATACAGGGACTGCACAGACCGCGAGAGAAACTTGGACAGTaGGCGCCGCTCTGCATAGTTGGCTTCTCTCTGGCTGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: GVIQGLHRPREKLGQ*APLCIVGFSLAGLG
Trigger: GCCAAGGCCAGCCAGAGAGAAGCCAACTATGCAGAGCGGCGCTCACTGTCCAAGTTTCTCTCGCGGTCTGTGCAGTCCCTGTATCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTGGGCTGGGATGCTGTTaGAGCGCATCATGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGGLGCC*SASCWA
Trigger: GGCCCAGCATGATGCGCTCAAACAGCATCCCAGCCC...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS TCA 90 bp GCCTGCAGAGGAACTGCTCATATTGGCAGCCCACACGAGACCACCTaGTGTGAAAGAGTGAACCGATGCTGGGCTGGAGGCCAACGAGTG +
Preference number: 5 (lower is better)
Translates to: ACRGTAHIGSPHETT*CERVNRCWAGGQRV
Trigger: CACTCGTTGGCCTCCAGCCCAGCATCGGTTCACTCTTTCACATCAGGTGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCTCTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CCA 90 bp TACTGCTGGTACTGGATCTGTGGCCTCCTCGGCCAGGAATGCCACTaGTGCTGGATTTTGAAGGGCGGGGCAAGCTGCGATATTGTAGGG +
Preference number: 5 (lower is better)
Translates to: YCWYWICGLLGQECH*CWILKGGASCDIVG
Trigger: CCCTACAATATCGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CCA 90 bp ACAGTGAGCGCCGCTCTGCATAGTTGGCTTCTCTCTGGCTGGCCTTaGCAGCATTTCCAAACCAGTTGGAAATGCGCACCGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TVSAALHSWLLSGWP*QHFQTSWKCAPWVS
Trigger: GGAGACCCACGGTGCGCATTTCCAACTGGTTTGGAAATGCTGCCAAGGCCAGCCAGAGAGAAGCCAACTATGCAGAGCGGCGCTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CCA 90 bp AGCTGCTGGTGTGATACAGGGACTGCACAGACCGCGAGAGAAACTTaGACAGTGAGCGCCGCTCTGCATAGTTGGCTTCTCTCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SCWCDTGTAQTARET*TVSAALHSWLLSGW
Trigger: CCAGCCAGAGAGAAGCCAACTATGCAGAGCGGCGCTCACTGTCCAAGTTTCTCTCGCGGTCTGTGCAGTCCCTGTATCACACCAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACCACTGGTGCTGGATTTaGAAGGGCGGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDHWCWI*KGGASC
Trigger: GCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTG...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS CCA 90 bp ACTTGGACAGTGAGCGCCGCTCTGCATAGTTGGCTTCTCTCTGGCTaGCCTTGGCAGCATTTCCAAACCAGTTGGAAATGCGCACCGTGG +
Preference number: 5 (lower is better)
Translates to: TWTVSAALHSWLLSG*PWQHFQTSWKCAPW
Trigger: CCACGGTGCGCATTTCCAACTGGTTTGGAAATGCTGCCAAGGCCAGCCAGAGAGAAGCCAACTATGCAGAGCGGCGCTCACTGTCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CCA 90 bp CAGACCGCGAGAGAAACTTGGACAGTGAGCGCCGCTCTGCATAGTTaGCTTCTCTCTGGCTGGCCTTGGCAGCATTTCCAAACCAGTTGG +
Preference number: 5 (lower is better)
Translates to: QTARETWTVSAALHS*LLSGWPWQHFQTSW
Trigger: CCAACTGGTTTGGAAATGCTGCCAAGGCCAGCCAGAGAGAAGCCAACTATGCAGAGCGGCGCTCACTGTCCAAGTTTCTCTCGCGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGTGGGGGTGGGTCGACTaGTCAAGTTGGGTATGGTCC +
Preference number: 5 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRWGWVD*SSWVWS
Trigger: GGACCATACCCAACTTGACAAGTCGACCCACCCCCA...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGTGGCCCCAGCAGACTaGCTGCTGACGTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDVAPAD*LLTLES
Trigger: TGATTCCAACGTCAGCAGCAAGTCTGCTGGGGCCAC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGGGCTGGGATGCTGTTaGAGCGCATCATGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEGLGCC*SASCWA
Trigger: GGCCCAGCATGATGCGCTCAAACAGCATCCCAGCCC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS GCA 90 bp CAATCACATGTCTCAGCAGGAGGATGGGTCCACATTTCCCTCTGTTaGTTCTGTGTCCCGAAACGCCAGGAGGTGAAGCACGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: QSHVSAGGWVHISLC*FCVPKRQEVKHELR
Trigger: CCTCAGCTCGTGCTTCACCTCCTGGCGTTTCGGGACACAGAAGCAACAGAGGGAAATGTGGACCCATCCTCCTGCTGAGACATGTGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS GCA 90 bp CTCTTCTTGCAGACAATTCCTCTAAGTCTTCACTGTCTGACTGGCTaGCCCCAGCAGGCAGGAGGTTCCAGGCTGAGCTGCTGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: LFLQTIPLSLHCLTG*PQQAGGSRLSCWCD
Trigger: ATCACACCAGCAGCTCAGCCTGGAACCTCCTGCCTGCTGGGGGCAGCCAGTCAGACAGTGAAGACTTAGAGGAATTGTCTGCAAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTGCTCTGCCCACTGCTTaGTGCCACTGTCATGGTACA +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGALPTA*CHCHGT
Trigger: TGTACCATGACAGTGGCACAAAGCAGTGGGCAGAGC...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGATGGCGCCCCTCCTaGGGCAGACATGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSERWRPS*GRHASS
Trigger: AGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATCT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACACTGGTGCTGGATTTaGAAGGGCGGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTHWCWI*KGGASC
Trigger: GCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTGGCTGCCTGAGACCTaGTGCACCACAGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASWLPET*CTTGAG
Trigger: GCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAGCCA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTGGCTGCCTGAGACCTaGTGCACCACAGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENWLPET*CTTGAG
Trigger: GCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAGCCA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGGCTGCCTGAGACCTaGTGCACCACAGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTWLPET*CTTGAG
Trigger: GCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAGCCA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS TCA 90 bp CCCAGCTGTCTGCATCCACTGTCACATCGTGAACCCCTCTCTGGATaGTGTCCCGGGAAGTTGCTGTGTCTGGTATTCGGTTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: PSCLHPLSHREPLSG*CPGKLLCLVFGSDF
Trigger: GAAGTCTGAACCGAATACCAGACACAGCAACTTCCCGGGACATCATCCAGAGAGGGGTTCACGATGTGACAGTGGATGCAGACAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS TCA 90 bp ACTGAACTGCTGTCATCCCAGCTGTCTGCATCCACTGTCACATCGTaGACCCCTCTCTGGATGATGTCCCGGGAAGTTGCTGTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: TELLSSQLSASTVTS*TPLWMMSREVAVSG
Trigger: ACCAGACACAGCAACTTCCCGGGACATCATCCAGAGAGGGGTTCACGATGTGACAGTGGATGCAGACAGCTGGGATGACAGCAGTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS TCA 90 bp CAGAGGAACTGCTCATATTGGCAGCCCACACGAGACCACCTGATGTaGAAGAGTGAACCGATGCTGGGCTGGAGGCCAACGAGTGACTTA +
Preference number: 5 (lower is better)
Translates to: QRNCSYWQPTRDHLM*KSEPMLGWRPTSDL
Trigger: TAAGTCACTCGTTGGCCTCCAGCCCAGCATCGGTTCACTCTTTCACATCAGGTGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 90 bp GGCTATGTTGCTGCTGTTGAGGGAGTTGGACAGCACCATTTCCTGTaGTCTGCCCACTGCTTTGTGCCACTGTCATGGTACAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: GYVAAVEGVGQHHFL*SAHCFVPLSWYRNQ
Trigger: CTGGTTCCTGTACCATGACAGTGGCACAAAGCAGTGGGCAGAGCACAGGAAATGGTGCTGTCCAACTCCCTCAACAGCAGCAACATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS GCA 90 bp AATCAATACTGCTGGTACTGGATCTGTGGCCTCCTCGGCCAGGAATaGCACTGGTGCTGGATTTTGAAGGGCGGGGCAAGCTGCGATATT +
Preference number: 5 (lower is better)
Translates to: NQYCWYWICGLLGQE*HWCWILKGGASCDI
Trigger: AATATCGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAGCAGTATTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CCA 90 bp TTGAGTGCACTTGTTCCAGCTTTCTGCCTAGATGGCGCCCCTCCTTaGGCAGACATGCCTCTTCTCCAGGAACCTGTCTGTGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: LSALVPAFCLDGAPP*ADMPLLQEPVCETD
Trigger: GTCTGTTTCACAGACAGGTTCCTGGAGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATCTAGGCAGAAAGCTGGAACAAGTGCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTGGGAAGGGCTCCCCTaGGTAGTCCTGAATTTCTCA +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGWEGLP*VVLNFS
Trigger: TGAGAAATTCAGGACTACCAAGGGGAGCCCTTCCCA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGTGTTGCAGAGCCACTaGTTATGGTTGCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRVLQSH*LWLLHC
Trigger: GCAGTGGAGCAACCATAACAAGTGGCTCTGCAACAC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGAGGAACTGCTCATATaGGCAGCCCACACGAGACCA +
Preference number: 5 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTEELLI*AAHTRP
Trigger: TGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCTC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACATTGCCCTCTTCTTGGTaGGCCTGCCGAGATGATGGG +
Preference number: 5 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTLPSSW*ACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAA...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCTGATGCGAAGATCTTaGGGAGGATGGTCTGGACCA +
Preference number: 5 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRLMRRS*GGWSGP
Trigger: TGGTCCAGACCATCCTCCCAAAGATCTTCGCATCAG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAAGAGGAGGTGCTGCTaGAGGATTCTGACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEKRRCC*RILTVA
Trigger: GGCCACCGTCAGAATCCTCAAGCAGCACCTCCTCTT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTCTGGGTCAGGGCCCTaGACAGGGTGCTTTTATACT +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGSGSGP*TGCFYT
Trigger: AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCGACCGCGAGAGAAACTaGGACAGTGAGCGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: CNLASWRFRLSSAASLETDRERN*DSERRS
Trigger: AGAGCGGCGCTCACTGTCCAAGTTTCTCTCGCGGTC...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 90 bp CTTTTCCTTGTCTGTTTGGTTGACGGTGACAGGACTCGAGCGCCCTaGCCCAATTTTAGTTGGTTCTCTCAGTTTCGAGGTGGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: LFLVCLVDGDRTRAP*PNFSWFSQFRGGGP
Trigger: GGGGCCACCACCTCGAAACTGAGAGAACCAACTAAAATTGGGTCAGGGCGCTCGAGTCCTGTCACCGTCAACCAAACAGACAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS TCA 90 bp CTTCCCGCAAACAGCTTTCTCCCTCCTCTTCAGCCCAGCTTCTGCTaGTGCTGCTTGGCTTGGAGGACACGTTTTCATCTTCAGACCTAC +
Preference number: 5 (lower is better)
Translates to: LPANSFLPPLQPSFC*CCLAWRTRFHLQTY
Trigger: GTAGGTCTGAAGATGAAAACGTGTCCTCCAAGCCAAGCAGCATCAGCAGAAGCTGGGCTGAAGAGGAGGGAGAAAGCTGTTTGCGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 90 bp TGTTCTAGATCACCCAGCATGGTAAGGATCACCTCCTCATCCAGATaGGCTGTCCCTTCCCGCAAACAGCTTTCTCCCTCCTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: CSRSPSMVRITSSSR*AVPSRKQLSPSSSA
Trigger: GGCTGAAGAGGAGGGAGAAAGCTGTTTGCGGGAAGGGACAGCTCATCTGGATGAGGAGGTGATCCTTACCATGCTGGGTGATCTAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS GCA 90 bp TCTTCTGATGCGAAGATCTTTGGGAGGATGGTCTGGACCATTCAGTaGTCCCTGAATAGCCGCCTGGGCAGCAGAATTCTGAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSDAKIFGRMVWTIQ*SLNSRLGSRILSLQ
Trigger: CTGAAGGCTCAGAATTCTGCTGCCCAGGCGGCTATTCAGGGAGCACTGAATGGTCCAGACCATCCTCCCAAAGATCTTCGCATCAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 90 bp AACCTGGCCGAGGTCTTGCCGGCGGGCCGCGGAAATCCTCAGGTTTaGGATTTTGAGCCACTTGATCAGGTTACTATGGAAATCGTCTTA +
Preference number: 5 (lower is better)
Translates to: NLAEVLPAGRGNPQV*DFEPLDQVTMEIVL
Trigger: TAAGACGATTTCCATAGTAACCTGATCAAGTGGCTCAAAATCGCAAACCTGAGGATTTCCGCGGCCCGCCGGCAAGACCTCGGCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CCA 90 bp CTACGTTTGCCCGTCTTCATCCAATCACATGTCTCAGCAGGAGGATaGGTCCACATTTCCCTCTGTTGCTTCTGTGTCCCGAAACGCCAG +
Preference number: 5 (lower is better)
Translates to: LRLPVFIQSHVSAGG*VHISLCCFCVPKRQ
Trigger: CTGGCGTTTCGGGACACAGAAGCAACAGAGGGAAATGTGGACCCATCCTCCTGCTGAGACATGTGATTGGATGAAGACGGGCAAACGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACTGGACTGCATATCTaGCTGGGTTTTGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTTGLHI*LGFGLA
Trigger: AGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGCTATGTTGCTGCTGTaGAGGGAGTTGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEAMLLL*RELDST
Trigger: GGTGCTGTCCAACTCCCTCAACAGCAGCAACATAGC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGACACAGTCTTCCACTaGCCACCAGCATCCCCATGG +
Preference number: 5 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPDTVFH*PPASPW
Trigger: CCATGGGGATGCTGGTGGCAAGTGGAAGACTGTGTC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCCTTTCTCAGAAGCTTaGGCATCATCGGTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGPFSEA*ASSVFP
Trigger: CGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAGG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTTTTTCTCCCTGCATTaGACTTCCCGCCAATGGCAG +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDFFSLH*TSRQWQ
Trigger: CTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAAA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCACTGGTGCTGGATTTaGAAGGGCGGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENHWCWI*KGGASC
Trigger: GCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGTGGCCCCAGCAGACTaGCTGCTGACGTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPVAPAD*LLTLES
Trigger: TGATTCCAACGTCAGCAGCAAGTCTGCTGGGGCCAC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGAACGCAACCACTCTTaGCCCTCTTCTTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEERNHS*PSSWLA
Trigger: GGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTGTCAAGCACCCACTTaGAAGGATCTTCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDCQAPT*KDLPMV
Trigger: CACCATGGGAAGATCCTTCAAAGTGGGTGCTTGACA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTGTCAAGCACCCACTTaGAAGGATCTTCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGCQAPT*KDLPMV
Trigger: CACCATGGGAAGATCCTTCAAAGTGGGTGCTTGACA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTACTGGCCTCTTGGATTaGTTCTGGAATGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTTGLLD*FWNGVS
Trigger: GCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGT...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS TCA 90 bp AGACATGTCCAGGTCACTGCTTGCTTTCTCACTCATGTCAATCTGTaGCATGTTTCCCAGCCTAGAGACAGCAGCTCGACGGAGAGGCGT +
Preference number: 5 (lower is better)
Translates to: RHVQVTACFLTHVNL*HVSQPRDSSSTERR
Trigger: ACGCCTCTCCGTCGAGCTGCTGTCTCTAGGCTGGGAAACATGTCACAGATTGACATGAGTGAGAAAGCAAGCAGTGACCTGGACATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 90 bp GGTATCGGAAGAGCAGTATGCACAGGCTTTGACCCAACAGCTGGCTaGCTCAGTTTTGAGGCAACCCCAAGAACAGGCATGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: GIGRAVCTGFDPTAG*LSFEATPRTGMASI
Trigger: TATAGAAGCCATGCCTGTTCTTGGGGTTGCCTCAAAACTGAGGCAGCCAGCTGTTGGGTCAAAGCCTGTGCATACTGCTCTTCCGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS GCA 90 bp TGCTGTGACCCAGTAGTGCCAAGATTTGGTATCGGAAGAGCAGTATaGACAGGCTTTGACCCAACAGCTGGCTGCCTCAGTTTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: CCDPVVPRFGIGRAV*TGFDPTAGCLSFEA
Trigger: TGCCTCAAAACTGAGGCAGCCAGCTGTTGGGTCAAAGCCTGTGCATACTGCTCTTCCGATACCAAATCTTGGCACTACTGGGTCACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS CCA 90 bp GATTGTGAGGGCTTCATGGATGCTGAGCCACAGTCACCAGCATTATaGGGTAACTTGGGGGATGCCGGAAGGGATGAATCAGTAAGCTCT +
Preference number: 5 (lower is better)
Translates to: DCEGFMDAEPQSPAL*GNLGDAGRDESVSS
Trigger: AGAGCTTACTGATTCATCCCTTCCGGCATCCCCCAAGTTACCCCATAATGCTGGTGACTGTGGCTCAGCATCCATGAAGCCCTCACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGCTTGTGGCCTGATTTaGCTAGGTAGTGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKACGLI*LGSGWP
Trigger: GGGCCAACCACTACCTAGCAAAATCAGGCCACAAGC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAGGGAGGTGGCTGTACTaGACTGCTTTACAGTCAACA +
Preference number: 5 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTGRWLY*TALQST
Trigger: TGTTGACTGTAAAGCAGTCAAGTACAGCCACCTCCC...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGCTCTGCCCACTGCTTaGTGCCACTGTCATGGTACA +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKALPTA*CHCHGT
Trigger: TGTACCATGACAGTGGCACAAAGCAGTGGGCAGAGC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAATTCGGGTGGCTATGTaGCTGCTGTTGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTIRVAM*LLLREL
Trigger: CAACTCCCTCAACAGCAGCAACATAGCCACCCGAAT...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACGGTCGACTTGTCAAGTaGGGTATGGTCCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDGRLVK*GMVLPL
Trigger: TAATGGAAGGACCATACCCAACTTGACAAGTCGACC...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATGGGGGTGGGTCGACTaGTCAAGTTGGGTATGGTCC +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIWGWVD*SSWVWS
Trigger: GGACCATACCCAACTTGACAAGTCGACCCACCCCCA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGTCATGTACCCACTGTaGATGTCATCAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRVMYPL*MSSVLR
Trigger: TCTCAGGACTGATGACATCAACAGTGGGTACATGAC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGACACAGTCTTCCACTaGCCACCAGCATCCCCATGG +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIDTVFH*PPASPW
Trigger: CCATGGGGATGCTGGTGGCAAGTGGAAGACTGTGTC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTAGATGGCGCCCCTCCTaGGGCAGACATGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGRWRPS*GRHASS
Trigger: AGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATCT...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGTGGCCCCAGCAGACTaGCTGCTGACGTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENVAPAD*LLTLES
Trigger: TGATTCCAACGTCAGCAGCAAGTCTGCTGGGGCCAC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATCCTTGTCTGTTTGGTaGACGGTGACAGGACTCGAG +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESLSVW*TVTGLE
Trigger: CTCGAGTCCTGTCACCGTCAACCAAACAGACAAGGA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAATCCTTGTCTGTTTGGTaGACGGTGACAGGACTCGAG +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQSLSVW*TVTGLE
Trigger: CTCGAGTCCTGTCACCGTCAACCAAACAGACAAGGA...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTGCCCTCTTCTTGGTaGGCCTGCCGAGATGATGGG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLPSSW*ACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACTGATGCGAAGATCTTaGGGAGGATGGTCTGGACCA +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQLMRRS*GGWSGP
Trigger: TGGTCCAGACCATCCTCCCAAAGATCTTCGCATCAG...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAAGAGGAGGTGCTGCTaGAGGATTCTGACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTKRRCC*RILTVA
Trigger: GGCCACCGTCAGAATCCTCAAGCAGCACCTCCTCTT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCAAGAGGAGGTGCTGCTaGAGGATTCTGACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASKRRCC*RILTVA
Trigger: GGCCACCGTCAGAATCCTCAAGCAGCACCTCCTCTT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGAGATTTTTGGTCCTTaGCTCGACCATAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTEIFGP*LDHSPC
Trigger: GCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCTC...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATCTGGGTCAGGGCCCTaGACAGGGTGCTTTTATACT +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESGSGP*TGCFYT
Trigger: AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGGTTGCACAATTCCATTaGTGCTTATGGAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRVAQFH*CLWRTG
Trigger: GCCAGTCCTCCATAAGCACAAATGGAATTGTGCAAC...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTCTCTCTGGCTGGCCTaGGCAGCATTTCCAAACCAG +
Preference number: 5 (lower is better)
Translates to: CNLASWRFRLSSAASLETSLWLA*AAFPNQ
Trigger: CTGGTTTGGAAATGCTGCCAAGGCCAGCCAGAGAGA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGCTGGCTGCCTCAGTTTaGAGGCAACCCCAAGAACAG +
Preference number: 5 (lower is better)
Translates to: IPCAICSVALSLGSFPVELAASV*RQPQEQ
Trigger: CTGTTCTTGGGGTTGCCTCAAAACTGAGGCAGCCAG...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCTGGCTGCCTCAGTTTaGAGGCAACCCCAAGAACAG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLAASV*RQPQEQ
Trigger: CTGTTCTTGGGGTTGCCTCAAAACTGAGGCAGCCAG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGCTTGTGGCCTGATTTaGCTAGGTAGTGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTACGLI*LGSGWP
Trigger: GGGCCAACCACTACCTAGCAAAATCAGGCCACAAGC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATCCTTGATCAGCCGCTaGTGGCCTGATTTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKSLISR*WPDFAR
Trigger: CCTAGCAAAATCAGGCCACAAGCGGCTGATCAAGGA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTGACATTCATGGACTaGCTGCGCCAGGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLTFMD*LRQGLL
Trigger: CAGCAAGCCCTGGCGCAGCAAGTCCATGAATGTCAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGGGAGGTGGCTGTACTaGACTGCTTTACAGTCAACA +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEGRWLY*TALQST
Trigger: TGTTGACTGTAAAGCAGTCAAGTACAGCCACCTCCC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGAGGGAGCAGTTTaGACCCCTTCTGAGACAGGT +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIPEGAV*TPSETG
Trigger: ACCTGTCTCAGAAGGGGTCAAAACTGCTCCCTCAGG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATCTCAGACTCTTTGCTaGCTGTGCTGCCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSESQTLC*LCCQVK
Trigger: TTTCACCTGGCAGCACAGCAAGCAAAGAGTCTGAGA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATGGGAAGGGCTCCCCTaGGTAGTCCTGAATTTCTCA +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKWEGLP*VVLNFS
Trigger: TGAGAAATTCAGGACTACCAAGGGGAGCCCTTCCCA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTCGGGTGGCTATGTaGCTGCTGTTGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKIRVAM*LLLREL
Trigger: CAACTCCCTCAACAGCAGCAACATAGCCACCCGAAT...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGCAGTGCTGTCAAATGTaGTCTCCAGGGTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: IPCAICSVALSLGSFPVEQCCQM*SPGCCG
Trigger: GCCACAGCACCCTGGAGACAACATTTGACAGCACTG...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCAGTGCTGTCAAATGTaGTCTCCAGGGTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTQCCQM*SPGCCG
Trigger: GCCACAGCACCCTGGAGACAACATTTGACAGCACTG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGGGGGTGGGTCGACTaGTCAAGTTGGGTATGGTCC +
Preference number: 5 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPWGWVD*SSWVWS
Trigger: GGACCATACCCAACTTGACAAGTCGACCCACCCCCA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCAGATGGCGCCCCTCCTaGGGCAGACATGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFARWRPS*GRHASS
Trigger: AGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATCT...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACCTTTCTCAGAAGCTTaGGCATCATCGGTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEPFSEA*ASSVFP
Trigger: CGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAGG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACCTTTCTCAGAAGCTTaGGCATCATCGGTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQPFSEA*ASSVFP
Trigger: CGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAGG...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGAGGTGGGGCTGGATTaGGGGGAACCTGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTEVGLD*GEPDKE
Trigger: TTCTTTGTCAGGTTCCCCCAAATCCAGCCCCACCTC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGCAATATCTGGATACTaGGATCCTGGCTGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEAISGY*DPGCLR
Trigger: TCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGAGGAACTGCTCATATaGGCAGCCCACACGAGACCA +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTEELLI*AAHTRP
Trigger: TGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCTC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGCATTATGGGGTAACTaGGGGGATGCCGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENALWGN*GDAGRD
Trigger: ATCCCTTCCGGCATCCCCCAAGTTACCCCATAATGC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGAGATTTTTGGTCCTTaGCTCGACCATAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEEIFGP*LDHSPC
Trigger: GCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCTC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCAAAGAAAGTCCAGTTaGGCTATCCCATGTGCAATC +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGQRKSS*AIPCAI
Trigger: GATTGCACATGGGATAGCCAAACTGGACTTTCTTTG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS GCA 90 bp TTCAGTCTGTCTGAAGATGGTGTGGGGGAGGTGGCTGTACTTGACTaGTTTACAGTCAACATGGTGGAGGTGGCACTGTGTTTGACATTC +
Preference number: 5 (lower is better)
Translates to: FSLSEDGVGEVAVLD*FTVNMVEVALCLTF
Trigger: GAATGTCAAACACAGTGCCACCTCCACCATGTTGACTGTAAAGCAGTCAAGTACAGCCACCTCCCCCACACCATCTTCAGACAGACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS CCA 90 bp GGTGGCTGGTGCTTTCGCTGTCGCAGCTTTGTGTGCTCGAGTAATTaGCTGCTTCTTGGAGTTTCATTAGCATATTCATCAGGGGATCTC +
Preference number: 5 (lower is better)
Translates to: GGWCFRCRSFVCSSN*LLLGVSLAYSSGDL
Trigger: GAGATCCCCTGATGAATATGCTAATGAAACTCCAAGAAGCAGCCAATTACTCGAGCACACAAAGCTGCGACAGCGAAAGCACCAGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTCTCCAAATTCACAGGTaGATTTTAACGCAAGCTGAC +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGLQIHR*ILTQAD
Trigger: GTCAGCTTGCGTTAAAATCAACCTGTGAATTTGGAG...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCTTGTTGCAAGTCCTaGATCAGCCGCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISCCKS*ISRLWP
Trigger: AGGCCACAAGCGGCTGATCAAGGACTTGCAACAAGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCACTGGACTGCATATCTaGCTGGGTTTTGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTTGLHI*LGFGLA
Trigger: AGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTCTTTGGGACTGCTATTaGTTGAGCCACCACTATTCA +
Preference number: 5 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTLWDCY*LSHHYS
Trigger: TGAATAGTGGTGGCTCAACAAATAGCAGTCCCAAAG...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTGCTGTTGAGGGAGTaGGACAGCACCATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLLLRE*DSTISC
Trigger: ACAGGAAATGGTGCTGTCCAACTCCCTCAACAGCAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGGTCGACTTGTCAAGTaGGGTATGGTCCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQGRLVK*GMVLPL
Trigger: TAATGGAAGGACCATACCCAACTTGACAAGTCGACC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGTGTTGCAGAGCCACTaGTTATGGTTGCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASVLQSH*LWLLHC
Trigger: GCAGTGGAGCAACCATAACAAGTGGCTCTGCAACAC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGTGTTGCAGAGCCACTaGTTATGGTTGCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIVLQSH*LWLLHC
Trigger: GCAGTGGAGCAACCATAACAAGTGGCTCTGCAACAC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTTTTTCTCCCTGCATTaGACTTCCCGCCAATGGCAG +
Preference number: 5 (lower is better)
Translates to: CNLASWRFRLSSAASLETFFSLH*TSRQWQ
Trigger: CTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAAA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTCCTTGTCTGTTTGGTaGACGGTGACAGGACTCGAG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSLSVW*TVTGLE
Trigger: CTCGAGTCCTGTCACCGTCAACCAAACAGACAAGGA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGATTTGCCACCTGCCTaGGCACCAAACAACCTTCGA +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENDLPPA*APNNLR
Trigger: TCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAATC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGATTTGCCACCTGCCTaGGCACCAAACAACCTTCGA +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTDLPPA*APNNLR
Trigger: TCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAATC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGAACGCAACCACTCTTaGCCCTCTTCTTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFERNHS*PSSWLA
Trigger: GGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTGATGCGAAGATCTTaGGGAGGATGGTCTGGACCA +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILMRRS*GGWSGP
Trigger: TGGTCCAGACCATCCTCCCAAAGATCTTCGCATCAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTGATGCGAAGATCTTaGGGAGGATGGTCTGGACCA +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLMRRS*GGWSGP
Trigger: TGGTCCAGACCATCCTCCCAAAGATCTTCGCATCAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGTGGCTTGTGGCACTGTaGATACTAGAAACACTTTCA +
Preference number: 5 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRWLVAL*ILETLS
Trigger: TGAAAGTGTTTCTAGTATCAACAGTGCCACAAGCCA...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGCATTATGGGGTAACTaGGGGGATGCCGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGALWGN*GDAGRD
Trigger: ATCCCTTCCGGCATCCCCCAAGTTACCCCATAATGC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCCATTTTGTCGTTTCTTaGGTGGCCAGACAAGGGGTG +
Preference number: 5 (lower is better)
Translates to: CNLASWRFRLSSAASLETHFVVS*VARQGV
Trigger: CACCCCTTGTCTGGCCACCAAAGAAACGACAAAATG...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCGAGATTTTTGGTCCTTaGCTCGACCATAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPEIFGP*LDHSPC
Trigger: GCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCTC...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTCTCCTGAGGCAGAGTaGCTGAGCTCCATGGATATG +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENSPEAE*LSSMDM
Trigger: CATATCCATGGAGCTCAGCAACTCTGCCTCAGGAGA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTCTCCTGAGGCAGAGTaGCTGAGCTCCATGGATATG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTSPEAE*LSSMDM
Trigger: CATATCCATGGAGCTCAGCAACTCTGCCTCAGGAGA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACATTGGTATAAAACTCTaGTTAAGGGAGTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDIGIKL*LREWAG
Trigger: ACCTGCCCACTCCCTTAACAAGAGTTTTATACCAAT...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTAGATTTGATCCATGTTaGAGGCTTCAAAGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGRFDPC*RLQSQG
Trigger: ACCCTGACTTTGAAGCCTCAAACATGGATCAAATCT...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS GCA 90 bp CTCCTTACTTCTTTGCTCCGGAACACAGAGAGTTCAGCAGGCCGCTaGATGATTCTTCCAGTGGCTCCTTCCTTTCAATTGGACTTCATA +
Preference number: 5 (lower is better)
Translates to: LLTSLLRNTESSAGR*MILPVAPSFQLDFI
Trigger: TATGAAGTCCAATTGAAAGGAAGGAGCCACTGGAAGAATCATGCAGCGGCCTGCTGAACTCTCTGTGTTCCGGAGCAAAGAAGTAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGAGGTGGCACTGTGTTaGACATTCATGGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIEVALC*TFMDLL
Trigger: CAGCAAGTCCATGAATGTCAAACACAGTGCCACCTC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACAAAAGCAGTCCGGGCATaGACTAGCTTGAATTTCTCA +
Preference number: 5 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTKAVRA*TSLNFS
Trigger: TGAGAAATTCAAGCTAGTCAATGCCCGGACTGCTTT...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATGGGACTGCTATTTGTaGAGCCACCACTATTCAGAC +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKWDCYL*SHHYSD
Trigger: GTCTGAATAGTGGTGGCTCAACAAATAGCAGTCCCA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACTTTGGGACTGCTATTaGTTGAGCCACCACTATTCA +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSELWDCY*LSHHYS
Trigger: TGAATAGTGGTGGCTCAACAAATAGCAGTCCCAAAG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTAGCTGCTGTTGTCTaGCTGCCCTTAGGGATCAAG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLAAVV*LPLGIK
Trigger: CTTGATCCCTAAGGGCAGCAAGACAACAGCAGCTAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAGTCATGTACCCACTGTaGATGTCATCAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKVMYPL*MSSVLR
Trigger: TCTCAGGACTGATGACATCAACAGTGGGTACATGAC...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCGACACAGTCTTCCACTaGCCACCAGCATCCCCATGG +
Preference number: 5 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLDTVFH*PPASPW
Trigger: CCATGGGGATGCTGGTGGCAAGTGGAAGACTGTGTC...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTAGATGGCGCCCCTCCTaGGGCAGACATGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVRWRPS*GRHASS
Trigger: AGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATCT...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTTTTCTCCCTGCATTaGACTTCCCGCCAATGGCAG +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENFFSLH*TSRQWQ
Trigger: CTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAAA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCCTTTTCCTTGTCTGTTaGGTTGACGGTGACAGGACT +
Preference number: 5 (lower is better)
Translates to: IGKESRIVVLMLHLVLPALFLVC*VDGDRT
Trigger: AGTCCTGTCACCGTCAACCAAACAGACAAGGAAAAG...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCCTTTTCCTTGTCTGTTaGGTTGACGGTGACAGGACT +
Preference number: 5 (lower is better)
Translates to: CNLASWRFRLSSAASLETLFLVC*VDGDRT
Trigger: AGTCCTGTCACCGTCAACCAAACAGACAAGGAAAAG...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGAGGTGGGGCTGGATTaGGGGGAACCTGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFAEVGLD*GEPDKE
Trigger: TTCTTTGTCAGGTTCCCCCAAATCCAGCCCCACCTC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGCAATATCTGGATACTaGGATCCTGGCTGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENAISGY*DPGCLR
Trigger: TCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATTCCATTTGTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGATTTGCCACCTGCCTaGGCACCAAACAACCTTCGA +
Preference number: 5 (lower is better)
Translates to: IPFVLMEDWPLGFVLEWGDLPPA*APNNLR
Trigger: TCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAATC...ACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCACAAATGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACGGGCTGGGATGCTGTTaGAGCGCATCATGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYGLGCC*SASCWA
Trigger: GGCCCAGCATGATGCGCTCAAACAGCATCCCAGCCC...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGGGCTGGGATGCTGTTaGAGCGCATCATGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFGLGCC*SASCWA
Trigger: GGCCCAGCATGATGCGCTCAAACAGCATCCCAGCCC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCCTTGGAGACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTTGGCTTGTGGCACTGTaGATACTAGAAACACTTTCA +
Preference number: 5 (lower is better)
Translates to: LLGDHNSGSGPLTGCFYTWLVAL*ILETLS
Trigger: TGAAAGTGTTTCTAGTATCAACAGTGCCACAAGCCA...AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTCTCCAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGCATTATGGGGTAACTaGGGGGATGCCGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFAALWGN*GDAGRD
Trigger: ATCCCTTCCGGCATCCCCCAAGTTACCCCATAATGC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGATGCAGCTCTAGATTaGGTGATGAAGAAACTCCCT +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEDAALD*VMKKLP
Trigger: AGGGAGTTTCTTCATCACCAAATCTAGAGCTGCATC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATGTCAAGCACCCACTTaGAAGGATCTTCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKICQAPT*KDLPMV
Trigger: CACCATGGGAAGATCCTTCAAAGTGGGTGCTTGACA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTCTGGGTCAGGGCCCTaGACAGGGTGCTTTTATACT +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFSGSGP*TGCFYT
Trigger: AGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACAAAGAAAGTCCAGTTaGGCTATCCCATGTGCAATC +
Preference number: 5 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTQRKSS*AIPCAI
Trigger: GATTGCACATGGGATAGCCAAACTGGACTTTCTTTG...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAATTGGTATAAAACTCTaGTTAAGGGAGTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: VLMEDWPLGFVLEWGERTIGIKL*LREWAG
Trigger: ACCTGCCCACTCCCTTAACAAGAGTTTTATACCAAT...TGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTACAGCTTTGAGGGTTaGCATTCTGTATTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGYSFEG*HSVFVC
Trigger: GCAAACAAATACAGAATGCAAACCCTCAAAGCTGTA...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAGCTTCATGTACAGTTTaGAAGCATGCTCACTCTAGC +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEASCTV*KHAHSS
Trigger: GCTAGAGTGAGCATGCTTCAAAACTGTACATGAAGC...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGCTTCATGTACAGTTTaGAAGCATGCTCACTCTAGC +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQASCTV*KHAHSS
Trigger: GCTAGAGTGAGCATGCTTCAAAACTGTACATGAAGC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GACCACAACTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTGCTCCTTCCTTTCAATaGGACTTCATATTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: DHNSGSGPLTGCFYTGSGAPSFQ*DFILSC
Trigger: ACAAGACAATATGAAGTCCAATTGAAAGGAAGGAGC...ACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAGTTGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 90 bp ATTCATCAGGGGATCTCCTTCTGTGTCAGTTTGCGGAATGTGCTTTaGGGTTGTGGCTTCCTTAGTGGATGTGCAGCTTTCATACCCAAC +
Preference number: 5 (lower is better)
Translates to: IHQGISFCVSLRNVL*GCGFLSGCAAFIPN
Trigger: GTTGGGTATGAAAGCTGCACATCCACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAAACTGACACAGAAGGAGATCCCCTGATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 90 bp TCATATATCCACCCACATCGACCTCAGAAGACATGTCCAGGTCACTaGTTGCTTTCTCACTCATGTCAATCTGTGACATGTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SYIHPHRPQKTCPGH*LLSHSCQSVTCFPA
Trigger: GGCTGGGAAACATGTCACAGATTGACATGAGTGAGAAAGCAAGCAGTGACCTGGACATGTCTTCTGAGGTCGATGTGGGTGGATATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACTGATAGTACTGTTGTaGATGGTGTTGTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQLIVLL*MVLLLL
Trigger: AAGCAGCAACAACACCATCAACAACAGTACTATCAG...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCTTGACATTCATGGACTaGCTGCGCCAGGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLLTFMD*LRQGLL
Trigger: CAGCAAGCCCTGGCGCAGCAAGTCCATGAATGTCAA...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCCTGAGGGAGCAGTTTaGACCCCTTCTGAGACAGGT +
Preference number: 5 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLPEGAV*TPSETG
Trigger: ACCTGTCTCAGAAGGGGTCAAAACTGCTCCCTCAGG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACGGGCATTGACTAGCTaGAATTTCTCAAGCATGGAT +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKRALTS*NFSSMD
Trigger: ATCCATGCTTGAGAAATTCAAGCTAGTCAATGCCCG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAACTTAGGTGACACTTaGGGACTGCTATTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSENLGDT*GLLFVE
Trigger: CTCAACAAATAGCAGTCCCAAAGTGTCACCTAAGTT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGGTCGACTTGTCAAGTaGGGTATGGTCCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIGRLVK*GMVLPL
Trigger: TAATGGAAGGACCATACCCAACTTGACAAGTCGACC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTGTCCAGGTCACTGCTaGCTTTCTCACTCATGTCAA +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTCPGHC*LSHSCQ
Trigger: TTGACATGAGTGAGAAAGCAAGCAGTGACCTGGACA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGACACAGTCTTCCACTaGCCACCAGCATCCCCATGG +
Preference number: 5 (lower is better)
Translates to: CLLKLFHLELDGISPHVLDTVFH*PPASPW
Trigger: CCATGGGGATGCTGGTGGCAAGTGGAAGACTGTGTC...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGTGTTGCAGAGCCACTaGTTATGGTTGCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAVLQSH*LWLLHC
Trigger: GCAGTGGAGCAACCATAACAAGTGGCTCTGCAACAC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAACAATGGCAGCAGATTTaGGAATTTTACCCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEQWQQI*EFYPVL
Trigger: CAACACTGGGTAAAATTCCAAAATCTGCTGCCATTG...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTGTGGCCCCAGCAGACTaGCTGCTGACGTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFVAPAD*LLTLES
Trigger: TGATTCCAACGTCAGCAGCAAGTCTGCTGGGGCCAC...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTCCTTGTCTGTTTGGTaGACGGTGACAGGACTCGAG +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFASLSVW*TVTGLE
Trigger: CTCGAGTCCTGTCACCGTCAACCAAACAGACAAGGA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCCTTTTCCTTGTCTGTTaGGTTGACGGTGACAGGACT +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASLFLVC*VDGDRT
Trigger: AGTCCTGTCACCGTCAACCAAACAGACAAGGAAAAG...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATCTTTTCCTTGTCTGTTaGGTTGACGGTGACAGGACT +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENLFLVC*VDGDRT
Trigger: AGTCCTGTCACCGTCAACCAAACAGACAAGGAAAAG...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGAGGTTGGACTATCTTAGTCCCTTTTaGGGTAGTGTATTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: QTLLKPCDQHRVAQRRLDYLSPF*GSVFLS
Trigger: TGACAGAAATACACTACCCAAAAAGGGACTAAGATA...GTCCAACCTCCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATGGCTTGTGGCACTGTaGATACTAGAAACACTTTCA +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEWLVAL*ILETLS
Trigger: TGAAAGTGTTTCTAGTATCAACAGTGCCACAAGCCA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGATCACAGGGCCATTTaGTCGTTTCTTTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFDHRAI*SFLWWP
Trigger: TGGCCACCAAAGAAACGACAAAATGGCCCTGTGATC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp ACTAGGTGGACCTACTGGGATGTATTGCAGGAAATTCTGTTTATGCTCATGTTTAAGAGGAGGTGCTGCTaGAGGATTCTGACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TRWTYWDVLQEILFMLMFKRRCC*RILTVA
Trigger: GGCCACCGTCAGAATCCTCAAGCAGCACCTCCTCTT...AAACATGAGCATAAACAGAATTTCCTGCAATACATCCCAGTAGGTCCACCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATATGCCTGAGATTTTaGGTCCTTTGCTCGACCATA +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEICLRF*VLCSTI
Trigger: TATGGTCGAGCAAAGGACCAAAAATCTCAGGCATAT...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATTTTCTTCTACCCCTTaGAGGTTCACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEFSSTP*RFTVMM
Trigger: CATCATCACTGTGAACCTCAAAGGGGTAGAAGAAAA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CGCACAACACAAACACTACTGAAGCCCTGTGACCAGCACCGTGTGGCACAAAGGCAATTGAGAAAACCATaGAAGATATCACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RTTQTLLKPCDQHRVAQRQLRKP*KISLRE
Trigger: CTCTCTGAGTGATATCTTCAATGGTTTTCTCAATTG...CCTTTGTGCCACACGGTGCTGGTCACAGGGCTTCAGTAGTGTTTGTGTTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCACTGGCCTCTTGGATTaGTTCTGGAATGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: RKQRKSSLAIPCAICSVATGLLD*FWNGVS
Trigger: GCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGCAGTTAGAATTAAATaGGCACTTCTCCAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQAVRIK*ALLQFA
Trigger: GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCATAGCAACTGACCCATaGGTGGTCACAGAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPIATDP*VVTESS
Trigger: GCTACTCTCTGTGACCACCAATGGGTCAGTTGCTAT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTATAGCAACTGACCCATaGGTGGTCACAGAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFIATDP*VVTESS
Trigger: GCTACTCTCTGTGACCACCAATGGGTCAGTTGCTAT...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGGAAGCCAACTACGTTaGCCCGTCTTCATCCAATCA +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFGSQLR*PVFIQS
Trigger: TGATTGGATGAAGACGGGCAAACGTAGTTGGCTTCC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCATTGGTCAGAGACTTTaGTTTCTGAAGGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPIGQRL*FLKASS
Trigger: GGAGCTTGCCTTCAGAAACAAAAGTCTCTGACCAAT...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGCATTTCCAAACCAGTaGGAAATGCGCACCGTGGGT +
Preference number: 5 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAAFPNQ*EMRTVG
Trigger: ACCCACGGTGCGCATTTCCAACTGGTTTGGAAATGC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 90 bp GGGATGCTGTTTGAGCGCATCATGCTGGGCCCGGGAAGGTTAAACTaGGACAAATTTGTTGGGCTCACCAAGTTAGAAAAGTGGTATTTT +
Preference number: 5 (lower is better)
Translates to: GMLFERIMLGPGRLN*DKFVGLTKLEKWYF
Trigger: AAAATACCACTTTTCTAACTTGGTGAGCCCAACAAATTTGTCTCAGTTTAACCTTCCCGGGCCCAGCATGATGCGCTCAAACAGCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 90 bp AGCATATTCATCAGGGGATCTCCTTCTGTGTCAGTTTGCGGAATGTaGTTTGAGGTTGTGGCTTCCTTAGTGGATGTGCAGCTTTCATAC +
Preference number: 5 (lower is better)
Translates to: SIFIRGSPSVSVCGM*FEVVASLVDVQLSY
Trigger: GTATGAAAGCTGCACATCCACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAAACTGACACAGAAGGAGATCCCCTGATGAATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS CCA 90 bp CTAGAAGCACTTGCTTTCTCCATGGTTATAGGCTTAGATAAGGACTaGGAAGGGCTCCCCTTGGTAGTCCTGAATTTCTCAGACTCTTTG +
Preference number: 5 (lower is better)
Translates to: LEALAFSMVIGLDKD*EGLPLVVLNFSDSL
Trigger: CAAAGAGTCTGAGAAATTCAGGACTACCAAGGGGAGCCCTTCCCAGTCCTTATCTAAGCCTATAACCATGGAGAAAGCAAGTGCTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCCATCTGCAATGTCTaGTTGCAAGTCCTTGATCAG +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISICNV*LQVLDQ
Trigger: CTGATCAAGGACTTGCAACAAGACATTGCAGATGGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCCGGGCATTGACTAGCTaGAATTTCTCAAGCATGGAT +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTRALTS*NFSSMD
Trigger: ATCCATGCTTGAGAAATTCAAGCTAGTCAATGCCCG...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCAAAGCAGTCCGGGCATaGACTAGCTTGAATTTCTCA +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTKAVRA*TSLNFS
Trigger: TGAGAAATTCAAGCTAGTCAATGCCCGGACTGCTTT...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTGGGACTGCTATTTGTaGAGCCACCACTATTCAGAC +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFWDCYL*SHHYSD
Trigger: GTCTGAATAGTGGTGGCTCAACAAATAGCAGTCCCA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTCTCAGACTCTTTGCTaGCTGTGCTGCCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFASQTLC*LCCQVK
Trigger: TTTCACCTGGCAGCACAGCAAGCAAAGAGTCTGAGA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTCAGTGCTGTCAAATGTaGTCTCCAGGGTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVQCCQM*SPGCCG
Trigger: GCCACAGCACCCTGGAGACAACATTTGACAGCACTG...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCGTCATGTACCCACTGTaGATGTCATCAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPVMYPL*MSSVLR
Trigger: TCTCAGGACTGATGACATCAACAGTGGGTACATGAC...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCCCTTTCTCAGAAGCTTaGGCATCATCGGTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFAPFSEA*ASSVFP
Trigger: CGGGAAAACCGATGATGCCAAAGCTTCTGAGAAAGG...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCGAATTTTACCCAGTGTaGCAGAGCCACTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTEFYPV*QSHLLW
Trigger: CCATAACAAGTGGCTCTGCAACACTGGGTAAAATTC...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATGAATTTTACCCAGTGTaGCAGAGCCACTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENEFYPV*QSHLLW
Trigger: CCATAACAAGTGGCTCTGCAACACTGGGTAAAATTC...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGAGGTGGGGCTGGATTaGGGGGAACCTGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVEVGLD*GEPDKE
Trigger: TTCTTTGTCAGGTTCCCCCAAATCCAGCCCCACCTC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTTGCCCTCTTCTTGGTaGGCCTGCCGAGATGATGGG +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFLPSSW*ACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACTTGCCCTCTTCTTGGTaGGCCTGCCGAGATGATGGG +
Preference number: 5 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYLPSSW*ACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAA...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGAGATTTTTGGTCCTTaGCTCGACCATAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFAEIFGP*LDHSPC
Trigger: GCAAGGGCTATGGTCGAGCAAAGGACCAAAAATCTC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATAGATGCAGCTCTAGATTaGGTGATGAAGAAACTCCCT +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIDAALD*VMKKLP
Trigger: AGGGAGTTTCTTCATCACCAAATCTAGAGCTGCATC...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGCAAAGAAAGTCCAGTTaGGCTATCCCATGTGCAATC +
Preference number: 5 (lower is better)
Translates to: IPCAICSVALSLGSFPVEQRKSS*AIPCAI
Trigger: GATTGCACATGGGATAGCCAAACTGGACTTTCTTTG...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACATGCCCCCAATTTAGCTaGACACATCACTTTACTAAT +
Preference number: 5 (lower is better)
Translates to: EDWPLGFVLEWGERTTQTCPQFS*THHFTN
Trigger: ATTAGTAAAGTGATGTGTCAAGCTAAATTGGGGGCA...TGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTTTCTCCTTACTTCTTaGCTCCGGAACACAGAGAGT +
Preference number: 5 (lower is better)
Translates to: IPCAICSVALSLGSFPVEFLLTS*LRNTES
Trigger: ACTCTCTGTGTTCCGGAGCAAAGAAGTAAGGAGAAA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 90 bp ATATATCTGAAGCAGAAAAGAGTTCACCAAAGACTCTCCTCCAGCTaGAAAGTAGTCCAGGAAGCCAACTACGTTTGCCCGTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: IYLKQKRVHQRLSSS*KVVQEANYVCPSSS
Trigger: GGATGAAGACGGGCAAACGTAGTTGGCTTCCTGGACTACTTTTCAGCTGGAGGAGAGTCTTTGGTGAACTCTTTTCTGCTTCAGATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS GCA 90 bp ATGGAGCTCTCTGTTTCAGTAAGTTCCAAAGGTCTTGAAGAACAGTaGTGTGACCCAGTAGTGCCAAGATTTGGTATCGGAAGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: MELSVSVSSKGLEEQ*CDPVVPRFGIGRAV
Trigger: TACTGCTCTTCCGATACCAAATCTTGGCACTACTGGGTCACAGCACTGTTCTTCAAGACCTTTGGAACTTACTGAAACAGAGAGCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS GCA 90 bp ACAGCCTCTGTGATGTTCAAATTGTTTAGAGAAAGTCCTAATGACTaGCTGGAAGATGAAGAGGAGGTGCTGCTTGAGGATTCTGACGGT +
Preference number: 5 (lower is better)
Translates to: TASVMFKLFRESPND*LEDEEEVLLEDSDG
Trigger: ACCGTCAGAATCCTCAAGCAGCACCTCCTCTTCATCTTCCAGGCAGTCATTAGGACTTTCTCTAAACAATTTGAACATCACAGAGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000548948.5
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAAGTATCTTTTCTTTCTaGCTGGCTGGGATTCATATT +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQSIFSF*LAGIHI
Trigger: AATATGAATCCCAGCCAGCAAGAAAGAAAAGATACT...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTCCTTGATCAGCCGCTaGTGGCCTGATTTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVSLISR*WPDFAR
Trigger: CCTAGCAAAATCAGGCCACAAGCGGCTGATCAAGGA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACTGATAGTACTGTTGTaGATGGTGTTGTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKILIVLL*MVLLLL
Trigger: AAGCAGCAACAACACCATCAACAACAGTACTATCAG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAATTTGGAGGCTTGTTTTaGTCAATGCTGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKFGGLF*SMLLKL
Trigger: GAGCTTTAACAGCATTGACAAAAACAAGCCTCCAAA...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTATTGCTGAGATTTTaGCTTCCAGCTTTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTLLLRF*LPAFGG
Trigger: CCCTCCAAAAGCTGGAAGCAAAAATCTCAGCAATAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACAATGGCAGCAGATTTaGGAATTTTACCCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIQWQQI*EFYPVL
Trigger: CAACACTGGGTAAAATTCCAAAATCTGCTGCCATTG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCCACTGGTGCTGGATTTaGAAGGGCGGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFHWCWI*KGGASC
Trigger: GCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTG...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp CTCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAATATCTTAGTCCCTTTTaGGGTAGTGTATTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LWVRALDRVLLYWQWFSEYLSPF*GSVFLS
Trigger: TGACAGAAATACACTACCCAAAAAGGGACTAAGATA...TTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTGGCTTGTGGCACTGTaGATACTAGAAACACTTTCA +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASWLVAL*ILETLS
Trigger: TGAAAGTGTTTCTAGTATCAACAGTGCCACAAGCCA...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCTTGGAGACCTTCTTTTTCTTCTTCTaGGAGTCGGCATCATTACCA +
Preference number: 5 (lower is better)
Translates to: CNLASWRFRLSSAASLETFFFFF*ESASLP
Trigger: TGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGAA...GGTCTCCAAGGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTCCCAAAGGCTTGTTaGAAAGAACTTCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTFPKAC*KELLSS
Trigger: TGAGCTGAGAAGTTCTTTCAAACAAGCCTTTGGGAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
CDS-3UTR CAA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGTTCCCAAAGGCTTGTTaGAAAGAACTTCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: IPCAICSVALSLGSFPVEFPKAC*KELLSS
Trigger: TGAGCTGAGAAGTTCTTTCAAACAAGCCTTTGGGAA...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGCATTATGGGGTAACTaGGGGGATGCCGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSALWGN*GDAGRD
Trigger: ATCCCTTCCGGCATCCCCCAAGTTACCCCATAATGC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCATATGCCTGAGATTTTaGGTCCTTTGCTCGACCATA +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASICLRF*VLCSTI
Trigger: TATGGTCGAGCAAAGGACCAAAAATCTCAGGCATAT...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATTTTCTTCTACCCCTTaGAGGTTCACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIFSSTP*RFTVMM
Trigger: CATCATCACTGTGAACCTCAAAGGGGTAGAAGAAAA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTCTCCTGAGGCAGAGTaGCTGAGCTCCATGGATATG +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVSPEAE*LSSMDM
Trigger: CATATCCATGGAGCTCAGCAACTCTGCCTCAGGAGA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGTTGCACAATTCCATTaGTGCTTATGGAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFAVAQFH*CLWRTG
Trigger: GCCAGTCCTCCATAAGCACAAATGGAATTGTGCAAC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTCCAGTTGAGATTGGTATAAAACTCTaGTTAAGGGAGTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: IPCAICSVALSLGSFPVEIGIKL*LREWAG
Trigger: ACCTGCCCACTCCCTTAACAAGAGTTTTATACCAAT...CTCAACTGGAAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TGCTTATGGAGGACTGGCCTCTTGGATTTGTTCTGGAATGGGGTGAGCGCACAAGTTAACTGGTGTTGCTaGGTTGTAAATGAAAAGACA +
Preference number: 5 (lower is better)
Translates to: CLWRTGLLDLFWNGVSAQVNWCC*VVNEKT
Trigger: TGTCTTTTCATTTACAACCAAGCAACACCAGTTAAC...TTGTGCGCTCACCCCATTCCAGAACAAATCCAAGAGGCCAGTCCTCCATAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTTGGATTTGTTCTGGAATGGGGTGAGCGCACAACACAAACACTACTGAAGCCCCCAGATAATACAGCTTaGAGGGTTTGCATTCTGTAT +
Preference number: 5 (lower is better)
Translates to: LGFVLEWGERTTQTLLKPPDNTA*RVCILY
Trigger: ATACAGAATGCAAACCCTCAAAGCTGTATTATCTGG...GGGCTTCAGTAGTGTTTGTGTTGTGCGCTCACCCCATTCCAGAACAAATCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGACACCAAGTACTTATaGTTGGGGCTTTACAAAGAC +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASDTKYL*LGLYKD
Trigger: GTCTTTGTAAAGCCCCAACAATAAGTACTTGGTGTC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTCTTGTTGCAAGTCCTaGATCAGCCGCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFSCCKS*ISRLWP
Trigger: AGGCCACAAGCGGCTGATCAAGGACTTGCAACAAGA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTTTGGAGGCTTGTTTTaGTCAATGCTGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTFGGLF*SMLLKL
Trigger: GAGCTTTAACAGCATTGACAAAAACAAGCCTCCAAA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS-3UTR CAA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACCTGCTGTTGAGGGAGTaGGACAGCACCATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYLLLRE*DSTISC
Trigger: ACAGGAAATGGTGCTGTCCAACTCCCTCAACAGCAG...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCGAATTTTACCCAGTGTaGCAGAGCCACTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: RKQRKSSLAIPCAICSVAEFYPV*QSHLLW
Trigger: CCATAACAAGTGGCTCTGCAACACTGGGTAAAATTC...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGAATTTTACCCAGTGTaGCAGAGCCACTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFAEFYPV*QSHLLW
Trigger: CCATAACAAGTGGCTCTGCAACACTGGGTAAAATTC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGTTTTTCTCCCTGCATTaGACTTCCCGCCAATGGCAG +
Preference number: 5 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQFFSLH*TSRQWQ
Trigger: CTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAAA...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp TGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATTTCTTTTTCTTCTTCTaGGAGTCGGCATCATTACCA +
Preference number: 5 (lower is better)
Translates to: WVRALDRVLLYWQWFSENFFFFF*ESASLP
Trigger: TGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGAA...ATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCATATGCCTGAGATTTTaGGTCCTTTGCTCGACCATA +
Preference number: 5 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPICLRF*VLCSTI
Trigger: TATGGTCGAGCAAAGGACCAAAAATCTCAGGCATAT...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTTTTTCTTCTACCCCTTaGAGGTTCACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFFSSTP*RFTVMM
Trigger: CATCATCACTGTGAACCTCAAAGGGGTAGAAGAAAA...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTTTTCTTCTACCCCTTaGAGGTTCACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: GNKESPVWLSHVQSVQLPFSSTP*RFTVMM
Trigger: CATCATCACTGTGAACCTCAAAGGGGTAGAAGAAAA...GGGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp TCTGGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAACAATTGAGAAAACCATaGAAGATATCACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SGSGPLTGCFYTGSGLVKQLRKP*KISLRE
Trigger: CTCTCTGAGTGATATCTTCAATGGTTTTCTCAATTG...TTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCGATGCAGCTCTAGATTaGGTGATGAAGAAACTCCCT +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFADAALD*VMKKLP
Trigger: AGGGAGTTTCTTCATCACCAAATCTAGAGCTGCATC...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGTCAAGCACCCACTTaGAAGGATCTTCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVCQAPT*KDLPMV
Trigger: CACCATGGGAAGATCCTTCAAAGTGGGTGCTTGACA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACCTACAGCTTTGAGGGTTaGCATTCTGTATTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: VRALDRVLLYWQWFSENTYSFEG*HSVFVC
Trigger: GCAAACAAATACAGAATGCAAACCCTCAAAGCTGTA...GGTATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp ATAGGGAAGGAAAGCCGAATAGTTGTGCTCATGCTGCATCTAGTGCTTCCAGCCATCCAGTTAAGTCCATaGACACCAAGTACTTATTGT +
Preference number: 5 (lower is better)
Translates to: IGKESRIVVLMLHLVLPAIQLSP*TPSTYC
Trigger: ACAATAAGTACTTGGTGTCAATGGACTTAACTGGAT...GGCTGGAAGCACTAGATGCAGCATGAGCACAACTATTCGGCTTTCCTTCCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS GCA 90 bp AATTTCTCAGACTCTTTGCTTGCTGTGCTGCCAGGTGAAATGGTTTaGTTTACTGTTGGAACTTTAGAGCCTGGTTTTGGAATACCACTG +
Preference number: 5 (lower is better)
Translates to: NFSDSLLAVLPGEMV*FTVGTLEPGFGIPL
Trigger: CAGTGGTATTCCAAAACCAGGCTCTAAAGTTCCAACAGTAAAGCAAACCATTTCACCTGGCAGCACAGCAAGCAAAGAGTCTGAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS CCA 90 bp CAGGAGGCTGCCCAGCAGTACTTTTTCGTTTCCATTTGCATAATTTaGAGGCTTGTTTTTGTCAATGCTGTTAAAGCTCTGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: QEAAQQYFFVSICII*RLVFVNAVKALTSP
Trigger: AGGAGAAGTCAGAGCTTTAACAGCATTGACAAAAACAAGCCTCCAAATTATGCAAATGGAAACGAAAAAGTACTGCTGGGCAGCCTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547725.1
CDS-3UTR CAA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTAGAGGTGGCACTGTGTTaGACATTCATGGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLEVALC*TFMDLL
Trigger: CAGCAAGTCCATGAATGTCAAACACAGTGCCACCTC...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCAACTTAGGTGACACTTaGGGACTGCTATTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: RKQRKSSLAIPCAICSVANLGDT*GLLFVE
Trigger: CTCAACAAATAGCAGTCCCAAAGTGTCACCTAAGTT...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCTTATTGCTGAGATTTTaGCTTCCAGCTTTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RKQRKSSLAIPCAICSVALLLRF*LPAFGG
Trigger: CCCTCCAAAAGCTGGAAGCAAAAATCTCAGCAATAA...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTGTCCAGGTCACTGCTaGCTTTCTCACTCATGTCAA +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVCPGHC*LSHSCQ
Trigger: TTGACATGAGTGAGAAAGCAAGCAGTGACCTGGACA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000644176.1
CDS-3UTR CAA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTGCAATATCTGGATACTaGGATCCTGGCTGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSAISGY*DPGCLR
Trigger: TCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGC...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATACAATTGAGAAAACCATaGAAGATATCACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKIQLRKP*KISLRE
Trigger: CTCTCTGAGTGATATCTTCAATGGTTTTCTCAATTG...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTGCATCTAGTGCTTCCAGCCCTGCTGGATAATAATTCAAAATCTTCTGCCTTCGCAGTTAGAATTAAATaGGCACTTCTCCAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: LHLVLPALLDNNSKSSAFAVRIK*ALLQFA
Trigger: GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGC...GAAGGCAGAAGATTTTGAATTATTATCCAGCAGGGCTGGAAGCACTAGATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GGGTCAGGGCCCTTGACAGGGTGCTTTTATACTGGCAGTGGTTTAGTGAAAATATCATATACTAAAAAGTaGGTGGAGCACATCATGAGA +
Preference number: 5 (lower is better)
Translates to: GSGPLTGCFYTGSGLVKISYTKK*VEHIMR
Trigger: TCTCATGATGTGCTCCACCAACTTTTTAGTATATGA...TATTTTCACTAAACCACTGCCAGTATAAAAGCACCCTGTCAAGGGCCCTGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGTTAACTGGTGTTGCTaGGTTGTAAATGAAAAGACA +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASVNWCC*VVNEKT
Trigger: TGTCTTTTCATTTACAACCAAGCAACACCAGTTAAC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTTAAAACCTGTCCTTaGTGTGTGGTGGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: RKQRKSSLAIPCAICSVALKTCP*CVVVTS
Trigger: AGAAGTTACCACCACACACAAAGGACAGGTTTTAAG...GGCAACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AGCTTCCATTGCAATTTAGCATCTTGGCGGTTCAGACTTAGTTCTGCTGCCTCCGGACTTCATATTGTCTaGTTACACTGTGATTGTAAC +
Preference number: 5 (lower is better)
Translates to: SFHCNLASWRFRLSSAASGLHIV*LHCDCN
Trigger: GTTACAATCACAGTGTAACAAGACAATATGAAGTCC...GGAGGCAGCAGAACTAAGTCTGAACCGCCAAGATGCTAAATTGCAATGGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 90 bp AGGGGTTTCTTCTCTCCAAATTCACAGGTTGATTTTAACGCAAGCTaGCAAGAAAGCATGGAGCTCTCTGTTTCAGTAAGTTCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: RGFFSPNSQVDFNAS*QESMELSVSVSSKG
Trigger: ACCTTTGGAACTTACTGAAACAGAGAGCTCCATGCTTTCTTGTCAGCTTGCGTTAAAATCAACCTGTGAATTTGGAGAGAAGAAACCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS-3UTR CAA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACTGTCCAGGTCACTGCTaGCTTTCTCACTCATGTCAA +
Preference number: 5 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYCPGHC*LSHSCQ
Trigger: TTGACATGAGTGAGAAAGCAAGCAGTGACCTGGACA...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TTCCTCTTCCACAGTGACCTTACCGCTTCAGTGTTCTTTAATGCTGAATTTCTCCAATGGCAGCAGATTTaGGAATTTTACCCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: FLFHSDLTASVFFNAEFLQWQQI*EFYPVL
Trigger: CAACACTGGGTAAAATTCCAAAATCTGCTGCCATTG...GAGAAATTCAGCATTAAAGAACACTGAAGCGGTAAGGTCACTGTGGAAGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GCACATCATGAGAACGTGGCAGTTAGAATTAAATTGGCACTTCTCCAGTTTGCCTTCTTTTTCTTCTTCTaGGAGTCGGCATCATTACCA +
Preference number: 5 (lower is better)
Translates to: AHHENVAVRIKLALLQFAFFFFF*ESASLP
Trigger: TGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGAA...GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGCCACGTTCTCATGATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGATGCAGCTCTAGATTaGGTGATGAAGAAACTCCCT +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVDAALD*VMKKLP
Trigger: AGGGAGTTTCTTCATCACCAAATCTAGAGCTGCATC...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AGTTTGGCTATCCCATGTGCAATCTGTTCAGTTGCCCTGTCATTAGGGTCCTTTGTTAACTGGTGTTGCTaGGTTGTAAATGAAAAGACA +
Preference number: 5 (lower is better)
Translates to: SLAIPCAICSVALSLGSFVNWCC*VVNEKT
Trigger: TGTCTTTTCATTTACAACCAAGCAACACCAGTTAAC...AAAGGACCCTAATGACAGGGCAACTGAACAGATTGCACATGGGATAGCCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS TCA 90 bp AGCAAGTTTGTTTGCCAAATAGGTCTTTCCAGTACCACTCGGTCCTaGGAGTATAATTCTGTGATGCTCCATCAACAAGTTAAAGTACCT +
Preference number: 5 (lower is better)
Translates to: SKFVCQIGLSSTTRS*EYNSVMLHQQVKVP
Trigger: AGGTACTTTAACTTGTTGATGGAGCATCACAGAATTATACTCTCAGGACCGAGTGGTACTGGAAAGACCTATTTGGCAAACAAACTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTCCATCTGCAATGTCTaGTTGCAAGTCCTTGATCAG +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFSICNV*LQVLDQ
Trigger: CTGATCAAGGACTTGCAACAAGACATTGCAGATGGA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCTTAGCTGCTGTTGTCTaGCTGCCCTTAGGGATCAAG +
Preference number: 5 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFLAAVV*LPLGIK
Trigger: CTTGATCCCTAAGGGCAGCAAGACAACAGCAGCTAA...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTATTCCCAAAGGCTTGTTaGAAAGAACTTCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: CLLKLFHLELDGISPHVLFPKAC*KELLSS
Trigger: TGAGCTGAGAAGTTCTTTCAAACAAGCCTTTGGGAA...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGAGATTTGATCCATGTTaGAGGCTTCAAAGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQRFDPC*RLQSQG
Trigger: ACCCTGACTTTGAAGCCTCAAACATGGATCAAATCT...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGGACACCAAGTACTTATaGTTGGGGCTTTACAAAGAC +
Preference number: 5 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQDTKYL*LGLYKD
Trigger: GTCTTTGTAAAGCCCCAACAATAAGTACTTGGTGTC...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTTCCCAAAGGCTTGTTaGAAAGAACTTCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFFPKAC*KELLSQ
Trigger: CTGGCTGAGAAGTTCTTTCAAACAAGCCTTTGGGAA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTCAATGGCAGCAGATTTaGGAATTTTACCCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFQWQQI*EFYPVL
Trigger: CAACACTGGGTAAAATTCCAAAATCTGCTGCCATTG...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp AAGAGGAAACAAAGAAAGTCCAGTTTGGCTATCCCATGTGCAATCTGTTCAGTTTTCTTTTTCTTCTTCTaGGAGTCGGCATCATTACCA +
Preference number: 5 (lower is better)
Translates to: KRKQRKSSLAIPCAICSVFFFFF*ESASLP
Trigger: TGGTAATGATGCCGACTCCAAGAAGAAGAAAAAGAA...AACTGAACAGATTGCACATGGGATAGCCAAACTGGACTTTCTTTGTTTCCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp ATTCAAAATCTTCTGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGTTGCACAATTCCATTaGTGCTTATGGAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: IQNLLPSETLSLRTGWNFVAQFH*CLWRTG
Trigger: GCCAGTCCTCCATAAGCACAAATGGAATTGTGCAAC...GAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCAGAAGATTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTGCAGTTAGAATTAAATaGGCACTTCTCCAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFAVRIK*ALLQFA
Trigger: GGCAAACTGGAGAAGTGCCAATTTAATTCTAACTGC...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp CTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTAGGTTTTCTTAAAACCTGTCCTTaGTGTGTGGTGGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: LKLFHLELDGISPHVLGFLKTCP*CVVVTS
Trigger: AGAAGTTACCACCACACACAAAGGACAGGTTTTAAG...AAAACCTAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS CCA 90 bp TTGAGGTCCTTTGGAGGAATCTTTTTCGTTTCCATTTGCATAATTTaGAGGCTTGTTTTTGTCAATGCTGTTAAAGCTCTGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LRSFGGIFFVSICII*RLVFVNAVKALTSP
Trigger: AGGAGAAGTCAGAGCTTTAACAGCATTGACAAAAACAAGCCTCCAAATTATGCAAATGGAAACGAAAAAGATTCCTCCAAAGGACCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS-3UTR CAA 90 bp TGCCTTCTGAAACTCTTTCACTTAGAACTGGATGGAATTTCGCCACATGTCTTACAATTGAGAAAACCATaGAAGATATCACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: CLLKLFHLELDGISPHVLQLRKP*KISLRE
Trigger: CTCTCTGAGTGATATCTTCAATGGTTTTCTCAATTG...TAAGACATGTGGCGAAATTCCATCCAGTTCTAAGTGAAAGAGTTTCAGAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp AAACTTAAAACCTGTCCTTTGTGTGTGGTGGTAACTTCTCCAATGACTGATCAGTCATATACTAAAAAGTaGGTGGAGCACATCATGAGA +
Preference number: 5 (lower is better)
Translates to: KLKTCPLCVVVTSPMTDQSYTKK*VEHIMR
Trigger: TCTCATGATGTGCTCCACCAACTTTTTAGTATATGA...CTGATCAGTCATTGGAGAAGTTACCACCACACACAAAGGACAGGTTTTAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp ATACATCATCCAGTTAAGTCCATTGACACCAAGTACTTATTGTTGGGGCTTTACCCAGATAATACAGCTTaGAGGGTTTGCATTCTGTAT +
Preference number: 5 (lower is better)
Translates to: IHHPVKSIDTKYLLLGLYPDNTA*RVCILY
Trigger: ATACAGAATGCAAACCCTCAAAGCTGTATTATCTGG...GTAAAGCCCCAACAATAAGTACTTGGTGTCAATGGACTTAACTGGATGATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp TGCACTCTCTTTAAAGCCTGCCATGACAGATGTACTTTCAGACAGTTTTACTTAACCAAGTACTTATTGTaGGGGCTTTACAAAGACTAC +
Preference number: 5 (lower is better)
Translates to: CTLFKACHDRCTFRQFYLTKYLL*GLYKDY
Trigger: GTAGTCTTTGTAAAGCCCCAACAATAAGTACTTGGT...TAAGTAAAACTGTCTGAAAGTACATCTGTCATGGCAGGCTTTAAAGAGAGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS-3UTR CAA 90 bp TTTCACAACAGATTTGATCCATGTTTGAGGCTTCAAAGTCAGGGTGACAATTCTATACTAAATACTCCTTaGGGGAGTAAACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FHNRFDPCLRLQSQGDNSILNTP*GSKLFF
Trigger: GAAGAAGAGTTTACTCCCCAAAGGAGTATTTAGTAT...AGAATTGTCACCCTGACTTTGAAGCCTCAAACATGGATCAAATCTGTTGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTTCATATACTAAAAAGTaGGTGGAGCACATCATGAGA +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFSYTKK*VEHIMR
Trigger: TCTCATGATGTGCTCCACCAACTTTTTAGTATATGA...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000552895.5
ENST00000644176.1
CDS-3UTR CAA 90 bp GTGTTGACTAATAATTGGTATAAAACTCTTGTTAAGGGAGTGGGCAGGTGGTTTATCCAGTTAAGTCCATaGACACCAAGTACTTATTGT +
Preference number: 5 (lower is better)
Translates to: VLTNNWYKTLVKGVGRWFIQLSP*TPSTYC
Trigger: ACAATAAGTACTTGGTGTCAATGGACTTAACTGGAT...AAACCACCTGCCCACTCCCTTAACAAGAGTTTTATACCAATTATTAGTCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000552895.5
CDS TCA 90 bp AGTACTGTTGTTGATGGTGTTGTTGCTGCTTGTAGCGAGATAAACTaGAAAACAGCCCTAGAATGGCTTTTAAGTTTCCATTTCTTATTT +
Preference number: 5 (lower is better)
Translates to: STVVDGVVAACSEIN*KTALEWLLSFHFLF
Trigger: AAATAAGAAATGGAAACTTAAAAGCCATTCTAGGGCTGTTTTTCAGTTTATCTCGCTACAAGCAGCAACAACACCATCAACAACAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000547725.1
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS CCA 72 bp CGAAAGCGCGAGCTCGCTCTCAGCCTCCAGCCGGCCTaGGCGGCGAGTGGCGCTGTTTCCCAGCCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RKRELALSLQPA*AASGAVSQPRS
Trigger: GCTGCGCGGCTGGGAAACAGCGCCACTCGCCGCCCAGGCCGGCTGGAGGCTGAGAGCGAGCTCGCGCTTTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS GCA 72 bp CGTCTTGGAACCGCGCGGGATGGACGGAGCGGGCCCTaGGAGAAAAGTTTCCTGCGGGAACGGCGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RLGTARDGRSGP*EKSFLRERREE
Trigger: CTCCTCCCGCCGTTCCCGCAGGAAACTTTTCTCGCAGGGCCCGCTCCGTCCATCCCGCGCGGTTCCAAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS GCA 72 bp AGAGAGGGCTGCTGCTGCCGCTTAGCCCACCAGCACTaGCCATGCTGCCCGTACCGGACGACGGTGACTCCA +
Preference number: 6 (lower is better)
Translates to: REGCCCRLAHQH*PCCPYRTTVTP
Trigger: TGGAGTCACCGTCGTCCGGTACGGGCAGCATGGGCAGTGCTGGTGGGCTAAGCGGCAGCAGCAGCCCTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CCA 72 bp AGCTGGAATTTAAAGAGACAGGCGCGTCGCGGGGTCTaGGCCCTTGCCCAGGAGAGGAGCCCACGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SWNLKRQARRGV*ALAQERSPREA
Trigger: GGCCTCCCGTGGGCTCCTCTCCTGGGCAAGGGCCCAGACCCCGCGACGCGCCTGTCTCTTTAAATTCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CCA 72 bp GCTCGCTCTCAGCCTCCAGCCGGCCTGGGCGGCGAGTaGCGCTGTTTCCCAGCCGCGCAGCTGGAATTTAAA +
Preference number: 6 (lower is better)
Translates to: ARSQPPAGLGGE*RCFPAAQLEFK
Trigger: TTTAAATTCCAGCTGCGCGGCTGGGAAACAGCGCCACTCGCCGCCCAGGCCGGCTGGAGGCTGAGAGCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CCA 72 bp CCGAGGCACATTCTTGTCACCCAGAAAGAAACTGCTTaGGCCGCTGAGAGCGGGTGCGGGACCGGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: PRHILVTQKETA*AAESGCGTGRG
Trigger: CCCGCGCCCGGTCCCGCACCCGCTCTCAGCGGCCCAAGCAGTTTCTTTCTGGGTGACAAGAATGTGCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS GCA 72 bp TGCTGGTACTGGATCTGTGGCCTCCTCGGCCAGGAATaGCACTGGTGCTGGATTTTGAAGGGCGGGGCAAGC +
Preference number: 6 (lower is better)
Translates to: CWYWICGLLGQE*HWCWILKGGAS
Trigger: GCTTGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp CTGCCCGTACCGGACGACGGTGACTCCAGACTGCCTTaGCGCGCTAATGTGGTACTAGGGCTGGGCATTACT +
Preference number: 6 (lower is better)
Translates to: LPVPDDGDSRLP*RANVVLGLGIT
Trigger: AGTAATGCCCAGCCCTAGTACCACATTAGCGCGGCAAGGCAGTCTGGAGTCACCGTCGTCCGGTACGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp ACCCTAGAGGGCCCTGGAAGCCTGGACTGCATATCTTaGTGGGTTTTGGCCTGGCTGGCTTCCGATGGAGGG +
Preference number: 6 (lower is better)
Translates to: TLEGPGSLDCIS*WVLAWLASDGG
Trigger: CCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGGCTTCCAGGGCCCTCTAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547725.1
ENST00000550503.1
CDS CCA 72 bp GAAGTCGCGGACATGCCTGGCCCAACCTCCAGGTCATaGGGGTGGGTCGACTTGTCAAGTTGGGTATGGTCC +
Preference number: 6 (lower is better)
Translates to: EVADMPGPTSRS*GWVDLSSWVWS
Trigger: GGACCATACCCAACTTGACAAGTCGACCCACCCCCATGACCTGGAGGTTGGGCCAGGCATGTCCGCGACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CCA 72 bp GCCCTGGAAGCCTGGACTGCATATCTTGCTGGGTTTTaGCCTGGCTGGCTTCCGATGGAGGGGAAGCGTGAG +
Preference number: 6 (lower is better)
Translates to: ALEAWTAYLAGF*PGWLPMEGKRE
Trigger: CTCACGCTTCCCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGGCTTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547725.1
ENST00000550503.1
CDS CCA 72 bp TGGCTGCCAGACTGGACTGCATATCTTGCTGGGTTTTaGCCTGGCTGGCTTCCGATGGAGGGGAAGCGTGAG +
Preference number: 6 (lower is better)
Translates to: WLPDWTAYLAGF*PGWLPMEGKRE
Trigger: CTCACGCTTCCCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTCTGGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
CDS CCA 72 bp GCGGACATGCCTGGCCCAACCTCCAGGTCATGGGGGTaGGTCGACTTGTCAAGTTGGGTATGGTCCTTCCAT +
Preference number: 6 (lower is better)
Translates to: ADMPGPTSRSWG*VDLSSWVWSFH
Trigger: ATGGAAGGACCATACCCAACTTGACAAGTCGACCCACCCCCATGACCTGGAGGTTGGGCCAGGCATGTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CCA 72 bp TACTGGATCTGTGGCCTCCTCGGCCAGGAATGCCACTaGTGCTGGATTTTGAAGGGCGGGGCAAGCTGCGAT +
Preference number: 6 (lower is better)
Translates to: YWICGLLGQECH*CWILKGGASCD
Trigger: ATCGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAGGCCACAGATCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp CTAGAGGGCCCTGGAAGCCTGGACTGCATATCTTGCTaGGTTTTGGCCTGGCTGGCTTCCGATGGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: LEGPGSLDCISC*VLAWLASDGGE
Trigger: TTCCCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGGCTTCCAGGGCCCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547725.1
ENST00000550503.1
CDS TCA 72 bp GTGAGGCAATATCTGGATACTTGGATCCTGGCTGCCTaGGACCTTGTGCACCACAGGCGCTGGCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: VRQYLDTWILAA*DLVHHRRWQRW
Trigger: CCACCTCTGCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGCCTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS TCA 72 bp CAGGGACTGCACAGACCGCGAGAGAAACTTGGACAGTaGGCGCCGCTCTGCATAGTTGGCTTCTCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: QGLHRPREKLGQ*APLCIVGFSLA
Trigger: AGCCAGAGAGAAGCCAACTATGCAGAGCGGCGCTCACTGTCCAAGTTTCTCTCGCGGTCTGTGCAGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS GCA 72 bp TGGATCTGTGGCCTCCTCGGCCAGGAATGCCACTGGTaGTGGATTTTGAAGGGCGGGGCAAGCTGCGATATT +
Preference number: 6 (lower is better)
Translates to: WICGLLGQECHW*WILKGGASCDI
Trigger: AATATCGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAGGCCACAGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp CTCTCTGGCTGGCCTTGGCAGCATTTCCAAACCAGTTaGAAATGCGCACCGTGGGTCTCCTCTCCCCATCAC +
Preference number: 6 (lower is better)
Translates to: LSGWPWQHFQTS*KCAPWVSSPHH
Trigger: GTGATGGGGAGAGGAGACCCACGGTGCGCATTTCCAACTGGTTTGGAAATGCTGCCAAGGCCAGCCAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 72 bp TGCTCATATTGGCAGCCCACACGAGACCACCTGATGTaGAAGAGTGAACCGATGCTGGGCTGGAGGCCAACG +
Preference number: 6 (lower is better)
Translates to: CSYWQPTRDHLM*KSEPMLGWRPT
Trigger: CGTTGGCCTCCAGCCCAGCATCGGTTCACTCTTTCACATCAGGTGGTCTCGTGTGGGCTGCCAATATGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp GTTGCATATCTGGCTGCCAGACTGGACTGCATATCTTaGTGGGTTTTGGCCTGGCTGGCTTCCGATGGAGGG +
Preference number: 6 (lower is better)
Translates to: VAYLAARLDCIS*WVLAWLASDGG
Trigger: CCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTCTGGCAGCCAGATATGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
CDS GCA 72 bp GGTAGCTCGGAGTATCCTTGCTGCCTGCAGAGGAACTaGTCATATTGGCAGCCCACACGAGACCACCTGATG +
Preference number: 6 (lower is better)
Translates to: GSSEYPCCLQRN*SYWQPTRDHLM
Trigger: CATCAGGTGGTCTCGTGTGGGCTGCCAATATGAGCAGTTCCTCTGCAGGCAGCAAGGATACTCCGAGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp GTCTCAGCAGGAGGATGGGTCCACATTTCCCTCTGTTaGTTCTGTGTCCCGAAACGCCAGGAGGTGAAGCAC +
Preference number: 6 (lower is better)
Translates to: VSAGGWVHISLC*FCVPKRQEVKH
Trigger: GTGCTTCACCTCCTGGCGTTTCGGGACACAGAAGCAACAGAGGGAAATGTGGACCCATCCTCCTGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CCA 72 bp GCATATCTGGCTGCCAGACTGGACTGCATATCTTGCTaGGTTTTGGCCTGGCTGGCTTCCGATGGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: AYLAARLDCISC*VLAWLASDGGE
Trigger: TTCCCCTCCATCGGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTCTGGCAGCCAGATATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
CDS CCA 72 bp ATCTGTGGCCTCCTCGGCCAGGAATGCCACTGGTGCTaGATTTTGAAGGGCGGGGCAAGCTGCGATATTGTA +
Preference number: 6 (lower is better)
Translates to: ICGLLGQECHWC*ILKGGASCDIV
Trigger: TACAATATCGCAGCTTGCCCCGCCCTTCAAAATCCAGCACCAGTGGCATTCCTGGCCGAGGAGGCCACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp ACTTGTTCCAGCTTTCTGCCTAGATGGCGCCCCTCCTaGGGCAGACATGCCTCTTCTCCAGGAACCTGTCTG +
Preference number: 6 (lower is better)
Translates to: TCSSFLPRWRPS*GRHASSPGTCL
Trigger: CAGACAGGTTCCTGGAGAAGAGGCATGTCTGCCCAAGGAGGGGCGCCATCTAGGCAGAAAGCTGGAACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp TCTCTCTGGCTGGCCTTGGCAGCATTTCCAAACCAGTaGGAAATGCGCACCGTGGGTCTCCTCTCCCCATCA +
Preference number: 6 (lower is better)
Translates to: SLWLALAAFPNQ*EMRTVGLLSPS
Trigger: TGATGGGGAGAGGAGACCCACGGTGCGCATTTCCAACTGGTTTGGAAATGCTGCCAAGGCCAGCCAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 72 bp CTGTCATCCCAGCTGTCTGCATCCACTGTCACATCGTaGACCCCTCTCTGGATGATGTCCCGGGAAGTTGCT +
Preference number: 6 (lower is better)
Translates to: LSSQLSASTVTS*TPLWMMSREVA
Trigger: AGCAACTTCCCGGGACATCATCCAGAGAGGGGTTCACGATGTGACAGTGGATGCAGACAGCTGGGATGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp GCTGCTGTTGAGGGAGTTGGACAGCACCATTTCCTGTaGTCTGCCCACTGCTTTGTGCCACTGTCATGGTAC +
Preference number: 6 (lower is better)
Translates to: AAVEGVGQHHFL*SAHCFVPLSWY
Trigger: GTACCATGACAGTGGCACAAAGCAGTGGGCAGAGCACAGGAAATGGTGCTGTCCAACTCCCTCAACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS GCA 72 bp CAGGAACCTGTCTGTGAAACAGACAGGGAAGCTTTCTaGCCTGCCTTCTCGGGGTCTTCAGGAAGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: QEPVCETDREAF*PAFSGSSGSPE
Trigger: CTCTGGACTTCCTGAAGACCCCGAGAAGGCAGGGCAGAAAGCTTCCCTGTCTGTTTCACAGACAGGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp AGTCATGGACTGGTAGCTCGGAGTATCCTTGCTGCCTaGAGAGGAACTGCTCATATTGGCAGCCCACACGAG +
Preference number: 6 (lower is better)
Translates to: SHGLVARSILAA*RGTAHIGSPHE
Trigger: CTCGTGTGGGCTGCCAATATGAGCAGTTCCTCTGCAGGCAGCAAGGATACTCCGAGCTACCAGTCCATGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp CATCATAGAGATCGAAGGAAGAGTCTTGGGCTGGGATaGTGTTTGAGCGCATCATGCTGGGCCCGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: HHRDRRKSLGLG*CLSASCWAREG
Trigger: ACCTTCCCGGGCCCAGCATGATGCGCTCAAACAGCATCCCAGCCCAAGACTCTTCCTTCGATCTCTATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp GCGAAGATCTTTGGGAGGATGGTCTGGACCATTCAGTaGTCCCTGAATAGCCGCCTGGGCAGCAGAATTCTG +
Preference number: 6 (lower is better)
Translates to: AKIFGRMVWTIQ*SLNSRLGSRIL
Trigger: CAGAATTCTGCTGCCCAGGCGGCTATTCAGGGAGCACTGAATGGTCCAGACCATCCTCCCAAAGATCTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp CTGACGTTGGAATCAATACTGCTGGTACTGGATCTGTaGCCTCCTCGGCCAGGAATGCCACTGGTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: LTLESILLVLDL*PPRPGMPLVLD
Trigger: ATCCAGCACCAGTGGCATTCCTGGCCGAGGAGGCCACAGATCCAGTACCAGCAGTATTGATTCCAACGTCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp CTGTCTTCTGATGCGAAGATCTTTGGGAGGATGGTCTaGACCATTCAGTGCTCCCTGAATAGCCGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: LSSDAKIFGRMV*TIQCSLNSRLG
Trigger: GCCCAGGCGGCTATTCAGGGAGCACTGAATGGTCCAGACCATCCTCCCAAAGATCTTCGCATCAGAAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp TGTGATACAGGGACTGCACAGACCGCGAGAGAAACTTaGACAGTGAGCGCCGCTCTGCATAGTTGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: CDTGTAQTARET*TVSAALHSWLL
Trigger: GAGAAGCCAACTATGCAGAGCGGCGCTCACTGTCCAAGTTTCTCTCGCGGTCTGTGCAGTCCCTGTATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CAA 72 bp GAATGGTGCCACTGTCGCGGTATTCGGGTGGCTATGTaGCTGCTGTTGAGGGAGTTGGACAGCACCATTTCC +
Preference number: 6 (lower is better)
Translates to: EWCHCRGIRVAM*LLLRELDSTIS
Trigger: GGAAATGGTGCTGTCCAACTCCCTCAACAGCAGCAACATAGCCACCCGAATACCGCGACAGTGGCACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS CAA 90 bp GCCTGGCCCAACCTCCAGGTCATGGGGGTGGGTCGACTTGTCAAGTaGGGTATGGTCCTTCCATTAACTTCTGTTGTCACAGTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: AWPNLQVMGVGRLVK*GMVLPLTSVVTVLS
Trigger: TGACAGCACTGTGACAACAGAAGTTAATGGAAGGACCATACCCAACTTGACAAGTCGACCCACCCCCATGACCTGGAGGTTGGGCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 90 bp GCACCAAACAACCTTCGAAATGTGGGTGAGGCAATATCTGGATACTaGGATCCTGGCTGCCTGAGACCTTGTGCACCACAGGCGCTGGCA +
Preference number: 6 (lower is better)
Translates to: APNNLRNVGEAISGY*DPGCLRPCAPQALA
Trigger: TGCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGCCTCACCCACATTTCGAAGGTTGTTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS TCA 72 bp CTGCATCCACTGTCACATCGTGAACCCCTCTCTGGATaGTGTCCCGGGAAGTTGCTGTGTCTGGTATTCGGT +
Preference number: 6 (lower is better)
Translates to: LHPLSHREPLSG*CPGKLLCLVFG
Trigger: ACCGAATACCAGACACAGCAACTTCCCGGGACATCATCCAGAGAGGGGTTCACGATGTGACAGTGGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp AGAGCAGTATGCACAGGCTTTGACCCAACAGCTGGCTaGCTCAGTTTTGAGGCAACCCCAAGAACAGGCATG +
Preference number: 6 (lower is better)
Translates to: RAVCTGFDPTAG*LSFEATPRTGM
Trigger: CATGCCTGTTCTTGGGGTTGCCTCAAAACTGAGGCAGCCAGCTGTTGGGTCAAAGCCTGTGCATACTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS GCA 72 bp AGCTTTGGCATCATCGGTTTTCCCGGGTGTTTTGAGTaGACTTGTTCCAGCTTTCTGCCTAGATGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: SFGIIGFPGCFE*TCSSFLPRWRP
Trigger: GGGGCGCCATCTAGGCAGAAAGCTGGAACAAGTGCACTCAAAACACCCGGGAAAACCGATGATGCCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp GAGGTCTTGCCGGCGGGCCGCGGAAATCCTCAGGTTTaGGATTTTGAGCCACTTGATCAGGTTACTATGGAA +
Preference number: 6 (lower is better)
Translates to: EVLPAGRGNPQV*DFEPLDQVTME
Trigger: TTCCATAGTAACCTGATCAAGTGGCTCAAAATCGCAAACCTGAGGATTTCCGCGGCCCGCCGGCAAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CCA 72 bp TTCCTGTGCTCTGCCCACTGCTTTGTGCCACTGTCATaGTACAGGAACCAGAAGGAGAAGCTTGGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: FLCSAHCFVPLS*YRNQKEKLGQL
Trigger: AAGCTGGCCAAGCTTCTCCTTCTGGTTCCTGTACCATGACAGTGGCACAAAGCAGTGGGCAGAGCACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS CCA 72 bp GGCTTCATGGATGCTGAGCCACAGTCACCAGCATTATaGGGTAACTTGGGGGATGCCGGAAGGGATGAATCA +
Preference number: 6 (lower is better)
Translates to: GFMDAEPQSPAL*GNLGDAGRDES
Trigger: TGATTCATCCCTTCCGGCATCCCCCAAGTTACCCCATAATGCTGGTGACTGTGGCTCAGCATCCATGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp GTCTGTCTGAAGATGGTGTGGGGGAGGTGGCTGTACTaGACTGCTTTACAGTCAACATGGTGGAGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: VCLKMVWGRWLY*TALQSTWWRWH
Trigger: GTGCCACCTCCACCATGTTGACTGTAAAGCAGTCAAGTACAGCCACCTCCCCCACACCATCTTCAGACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS CAA 72 bp GGTTCTCTCAGTTTCGAGGTGGTGGCCCCAGCAGACTaGCTGCTGACGTTGGAATCAATACTGCTGGTACTG +
Preference number: 6 (lower is better)
Translates to: GSLSFEVVAPAD*LLTLESILLVL
Trigger: CAGTACCAGCAGTATTGATTCCAACGTCAGCAGCAAGTCTGCTGGGGCCACCACCTCGAAACTGAGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CAA 90 bp ACTGCTTTGTGCCACTGTCATGGTACAGGAACCAGAAGGAGAAGCTaGGCCAGCTTCCCTTCCTTCCAAAGGGGCAGGACAACTAGAAGC +
Preference number: 6 (lower is better)
Translates to: TALCHCHGTGTRRRS*ASFPSFQRGRTTRS
Trigger: GCTTCTAGTTGTCCTGCCCCTTTGGAAGGAAGGGAAGCTGGCCAAGCTTCTCCTTCTGGTTCCTGTACCATGACAGTGGCACAAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS CAA 90 bp CCTGTAAATGAATGGTGCCACTGTCGCGGTATTCGGGTGGCTATGTaGCTGCTGTTGAGGGAGTTGGACAGCACCATTTCCTGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: PVNEWCHCRGIRVAM*LLLRELDSTISCAL
Trigger: CAGAGCACAGGAAATGGTGCTGTCCAACTCCCTCAACAGCAGCAACATAGCCACCCGAATACCGCGACAGTGGCACCATTCATTTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS CAA 90 bp GATGGGGTATATCTTCGAAATGTGGGTGAGGCAATATCTGGATACTaGGATCCTGGCTGCCTGAGACCTTGTGCACCACAGGCGCTGGCA +
Preference number: 6 (lower is better)
Translates to: DGVYLRNVGEAISGY*DPGCLRPCAPQALA
Trigger: TGCCAGCGCCTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGCCTCACCCACATTTCGAAGATATACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552895.5
CDS GCA 72 bp CCAGTAGTGCCAAGATTTGGTATCGGAAGAGCAGTATaGACAGGCTTTGACCCAACAGCTGGCTGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: PVVPRFGIGRAV*TGFDPTAGCLS
Trigger: ACTGAGGCAGCCAGCTGTTGGGTCAAAGCCTGTGCATACTGCTCTTCCGATACCAAATCTTGGCACTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS GCA 72 bp TCTGAAGATGGTGTGGGGGAGGTGGCTGTACTTGACTaGTTTACAGTCAACATGGTGGAGGTGGCACTGTGT +
Preference number: 6 (lower is better)
Translates to: SEDGVGEVAVLD*FTVNMVEVALC
Trigger: ACACAGTGCCACCTCCACCATGTTGACTGTAAAGCAGTCAAGTACAGCCACCTCCCCCACACCATCTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS GCA 72 bp GTTTCTGAAGGCAAGCTCCCTTTCTCCTTACTTCTTTaGTCCGGAACACAGAGAGTTCAGCAGGCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: VSEGKLPFSLLL*SGTQRVQQAAA
Trigger: TGCAGCGGCCTGCTGAACTCTCTGTGTTCCGGAGCAAAGAAGTAAGGAGAAAGGGAGCTTGCCTTCAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CCA 72 bp CTGAGACAGGTGGCTTCAGTCTGTCTGAAGATGGTGTaGGGGAGGTGGCTGTACTTGACTGCTTTACAGTCA +
Preference number: 6 (lower is better)
Translates to: LRQVASVCLKMV*GRWLYLTALQS
Trigger: TGACTGTAAAGCAGTCAAGTACAGCCACCTCCCCCACACCATCTTCAGACAGACTGAAGCCACCTGTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS CAA 72 bp TGCCGGCGGGCCGCGGAAATCCTCAGGTTTGCGATTTaGAGCCACTTGATCAGGTTACTATGGAAATCGTCT +
Preference number: 6 (lower is better)
Translates to: CRRAAEILRFAI*SHLIRLLWKSS
Trigger: AGACGATTTCCATAGTAACCTGATCAAGTGGCTCAAAATCGCAAACCTGAGGATTTCCGCGGCCCGCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550042.2
CDS CAA 90 bp GGCTTCATGGATGCTGAGCCACAGTCACCAGCATTATGGGGTAACTaGGGGGATGCCGGAAGGGATGAATCAGTAAGCTCTTCAATGTCA +
Preference number: 6 (lower is better)
Translates to: GFMDAEPQSPALWGN*GDAGRDESVSSSMS
Trigger: TGACATTGAAGAGCTTACTGATTCATCCCTTCCGGCATCCCCCAAGTTACCCCATAATGCTGGTGACTGTGGCTCAGCATCCATGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS CAA 90 bp AAGACTCTCCTCCAGCTGAAAAGTAGTCCAGGAAGCCAACTACGTTaGCCCGTCTTCATCCAATCACATGTCTCAGCAGGAGGATGGGTC +
Preference number: 6 (lower is better)
Translates to: KTLLQLKSSPGSQLR*PVFIQSHVSAGGWV
Trigger: GACCCATCCTCCTGCTGAGACATGTGATTGGATGAAGACGGGCAAACGTAGTTGGCTTCCTGGACTACTTTTCAGCTGGAGGAGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 72 bp TCTCAAGCATGGATTTCTGTCCTGAGGGAGCAGTTTTaGCCCCTTCTGAGACAGGTGGCTTCAGTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: SQAWISVLREQF*PLLRQVASVCL
Trigger: CAGACAGACTGAAGCCACCTGTCTCAGAAGGGGTCAAAACTGCTCCCTCAGGACAGAAATCCATGCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS TCA 72 bp CAGGTCACTGCTTGCTTTCTCACTCATGTCAATCTGTaGCATGTTTCCCAGCCTAGAGACAGCAGCTCGACG +
Preference number: 6 (lower is better)
Translates to: QVTACFLTHVNL*HVSQPRDSSST
Trigger: CGTCGAGCTGCTGTCTCTAGGCTGGGAAACATGTCACAGATTGACATGAGTGAGAAAGCAAGCAGTGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS TCA 72 bp GATGTTATCAAGGGTGTCACTGAGACCACTGCTCACTaGACTGCTGTCATCCCAGCTGTCTGCATCCACTGT +
Preference number: 6 (lower is better)
Translates to: DVIKGVTETTAH*TAVIPAVCIHC
Trigger: ACAGTGGATGCAGACAGCTGGGATGACAGCAGTTCAGTGAGCAGTGGTCTCAGTGACACCCTTGATAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS TCA 72 bp GTCTGTTTGGTTGACGGTGACAGGACTCGAGCGCCCTaGCCCAATTTTAGTTGGTTCTCTCAGTTTCGAGGT +
Preference number: 6 (lower is better)
Translates to: VCLVDGDRTRAP*PNFSWFSQFRG
Trigger: ACCTCGAAACTGAGAGAACCAACTAAAATTGGGTCAGGGCGCTCGAGTCCTGTCACCGTCAACCAAACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS TCA 72 bp ACCTGCCTTGGCACCAAACAACCTTCGAAATGTGGGTaGGGCAATATCTGGATACTTGGATCCTGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: TCLGTKQPSKCG*GNIWILGSWLP
Trigger: AGGCAGCCAGGATCCAAGTATCCAGATATTGCCTCACCCACATTTCGAAGGTTGTTTGGTGCCAAGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp GAACGCAACCACTCTTTGCCCTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTATATCTTCGAAATGTGGGT +
Preference number: 6 (lower is better)
Translates to: ERNHSLPSSWLA*RDDGVYLRNVG
Trigger: ACCCACATTTCGAAGATATACCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552895.5
CDS GCA 72 bp AGGTCTGTAACCCTTTACTCTAACGAGCTGACACAGTaGAGCAAGTACAGCCTGCTCATAGGAGCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: RSVTLYSNELTQ*SKYSLLIGAQE
Trigger: TTCCTGGGCTCCTATGAGCAGGCTGTACTTGCTGCACTGTGTCAGCTCGTTAGAGTAAAGGGTTACAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS GCA 72 bp TCTTTGCTCCGGAACACAGAGAGTTCAGCAGGCCGCTaGATGATTCTTCCAGTGGCTCCTTCCTTTCAATTG +
Preference number: 6 (lower is better)
Translates to: SLLRNTESSAGR*MILPVAPSFQL
Trigger: CAATTGAAAGGAAGGAGCCACTGGAAGAATCATGCAGCGGCCTGCTGAACTCTCTGTGTTCCGGAGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CCA 72 bp TCAGTTCCTCAGGACTATCCCAGGTCTCGTCTGTGGTaGAGCGTTTCTCTGAATCTGTCCTCAGCTGAGTAT +
Preference number: 6 (lower is better)
Translates to: SVPQDYPRSRLW*SVSLNLSSAEY
Trigger: ATACTCAGCTGAGGACAGATTCAGAGAAACGCTCCACCACAGACGAGACCTGGGATAGTCCTGAGGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CCA 72 bp TTTTCAGTTCCTCAGGACTATCCCAGGTCTCGTCTGTaGTGGAGCGTTTCTCTGAATCTGTCCTCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: FSVPQDYPRSRL*WSVSLNLSSAE
Trigger: CTCAGCTGAGGACAGATTCAGAGAAACGCTCCACCACAGACGAGACCTGGGATAGTCCTGAGGAACTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 72 bp AACCTTCGAAATGTGGGTGAGGCAATATCTGGATACTaGGATCCTGGCTGCCTGAGACCTTGTGCACCACAG +
Preference number: 6 (lower is better)
Translates to: NLRNVGEAISGY*DPGCLRPCAPQ
Trigger: CTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGCCTCACCCACATTTCGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 72 bp TCAGTATTAGGTGCAGAGGCAGATTTGCCACCTGCCTaGGCACCAAACAACCTTCGAAATGTGGGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: SVLGAEADLPPA*APNNLRNVGEA
Trigger: TGCCTCACCCACATTTCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAATCTGCCTCTGCACCTAATACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 90 bp ATTTTAGTTGGTTCTCTCAGTTTCGAGGTGGTGGCCCCAGCAGACTaGCTGCTGACGTTGGAATCAATACTGCTGGTACTGGATCTGTGG +
Preference number: 6 (lower is better)
Translates to: ILVGSLSFEVVAPAD*LLTLESILLVLDLW
Trigger: CCACAGATCCAGTACCAGCAGTATTGATTCCAACGTCAGCAGCAAGTCTGCTGGGGCCACCACCTCGAAACTGAGAGAACCAACTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CAA 90 bp ACTGAGGAAGATTTCACACCCTCAGTATTAGGTGCAGAGGCAGATTaGCCACCTGCCTTGGCACCAAACAACCTTCGAAATGTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: TEEDFTPSVLGAEAD*PPALAPNNLRNVGE
Trigger: CTCACCCACATTTCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAATCTGCCTCTGCACCTAATACTGAGGGTGTGAAATCTTCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS TCA 72 bp TTGCAGAGCCACTTGTTATGGTTGCTCCACTGCTGGTaGTCATGGCAGATGACCCTACTCCACTTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: LQSHLLWLLHCW*SWQMTLLHLVS
Trigger: AGAAACCAAGTGGAGTAGGGTCATCTGCCATGATCACCAGCAGTGGAGCAACCATAACAAGTGGCTCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS TCA 72 bp GGGATCTCCTTCTGTGTCAGTTTGCGGAATGTGCTTTaGGGTTGTGGCTTCCTTAGTGGATGTGCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: GISFCVSLRNVL*GCGFLSGCAAF
Trigger: GAAAGCTGCACATCCACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAAACTGACACAGAAGGAGATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp GAACGCAACCACTCTTTGCCCTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTATATCTTAGTCCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: ERNHSLPSSWLA*RDDGVYLSPFL
Trigger: CAAAAAGGGACTAAGATATACCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS GCA 72 bp TGTCAAGCACCCACTTTGAAGGATCTTCCCATGGTGTaGGTTTCCCATACATCTGAAGACCCTCTCTCACTG +
Preference number: 6 (lower is better)
Translates to: CQAPTLKDLPMV*VSHTSEDPLSL
Trigger: CAGTGAGAGAGGGTCTTCAGATGTATGGGAAACGCACACCATGGGAAGATCCTTCAAAGTGGGTGCTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp ATCAGGGGATCTCCTTCTGTGTCAGTTTGCGGAATGTaGTTTGAGGTTGTGGCTTCCTTAGTGGATGTGCAG +
Preference number: 6 (lower is better)
Translates to: IRGSPSVSVCGM*FEVVASLVDVQ
Trigger: CTGCACATCCACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAAACTGACACAGAAGGAGATCCCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp CATGGTGGCTGGTGCTTTCGCTGTCGCAGCTTTGTGTaGTCGAGTAATTGGCTGCTTCTTGGAGTTTCATTA +
Preference number: 6 (lower is better)
Translates to: HGGWCFRCRSFV*SSNWLLLGVSL
Trigger: TAATGAAACTCCAAGAAGCAGCCAATTACTCGAGCACACAAAGCTGCGACAGCGAAAGCACCAGCCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp GAACGCAACCACTCTTTGCCCTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTATATCTTTCTGAGAGAGTA +
Preference number: 6 (lower is better)
Translates to: ERNHSLPSSWLA*RDDGVYLSERV
Trigger: TACTCTCTCAGAAAGATATACCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550788.1
ENST00000644176.1
CDS GCA 72 bp CAGGAAGAGCAGGAATTAAGCACTGACGCCCAGCCCTaGACAAGCCTCTTACATTTTAGTATTCCACCTGCA +
Preference number: 6 (lower is better)
Translates to: QEEQELSTDAQP*TSLLHFSIPPA
Trigger: TGCAGGTGGAATACTAAAATGTAAGAGGCTTGTGCAGGGCTGGGCGTCAGTGCTTAATTCCTGCTCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CCA 72 bp AATGAGAACGCAACCACTCTTTGCCCTCTTCTTGGTTaGCCTGCCGAGATGATGGGGTATATCTTAGTCCCT +
Preference number: 6 (lower is better)
Translates to: NENATTLCPLLG*PAEMMGYILVP
Trigger: AGGGACTAAGATATACCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397909.7
ENST00000536525.6
CDS CAA 72 bp TTCTCAAGCATGGATTTCTGTCCTGAGGGAGCAGTTTaGACCCCTTCTGAGACAGGTGGCTTCAGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: FSSMDFCPEGAV*TPSETGGFSLS
Trigger: AGACAGACTGAAGCCACCTGTCTCAGAAGGGGTCAAAACTGCTCCCTCAGGACAGAAATCCATGCTTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS CAA 72 bp AACCTCCAGGTCATGGGGGTGGGTCGACTTGTCAAGTaGGGTATGGTCCTTCCATTAACTTCTGTTGTCACA +
Preference number: 6 (lower is better)
Translates to: NLQVMGVGRLVK*GMVLPLTSVVT
Trigger: TGTGACAACAGAAGTTAATGGAAGGACCATACCCAACTTGACAAGTCGACCCACCCCCATGACCTGGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 72 bp CGCCAATGGCAGCAGATTTTGGAATTTTACCCAGTGTaGCAGAGCCACTTGTTATGGTTGCTCCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: RQWQQILEFYPV*QSHLLWLLHCW
Trigger: CCAGCAGTGGAGCAACCATAACAAGTGGCTCTGCAACACTGGGTAAAATTCCAAAATCTGCTGCCATTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp TATCTTCGAAATGTGGGTGAGGCAATATCTGGATACTaGGATCCTGGCTGCCTGAGACCTTGTGCACCACAG +
Preference number: 6 (lower is better)
Translates to: YLRNVGEAISGY*DPGCLRPCAPQ
Trigger: CTGTGGTGCACAAGGTCTCAGGCAGCCAGGATCCAAGTATCCAGATATTGCCTCACCCACATTTCGAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552895.5
CDS CAA 72 bp CTCCAGCTGAAAAGTAGTCCAGGAAGCCAACTACGTTaGCCCGTCTTCATCCAATCACATGTCTCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: LQLKSSPGSQLR*PVFIQSHVSAG
Trigger: TCCTGCTGAGACATGTGATTGGATGAAGACGGGCAAACGTAGTTGGCTTCCTGGACTACTTTTCAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CAA 90 bp TTCTCCATGGTTATAGGCTTAGATAAGGACTGGGAAGGGCTCCCCTaGGTAGTCCTGAATTTCTCAGACTCTTTGCTTGCTGTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: FSMVIGLDKDWEGLP*VVLNFSDSLLAVLP
Trigger: TGGCAGCACAGCAAGCAAAGAGTCTGAGAAATTCAGGACTACCAAGGGGAGCCCTTCCCAGTCCTTATCTAAGCCTATAACCATGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS GCA 72 bp CACCCACATCGACCTCAGAAGACATGTCCAGGTCACTaGTTGCTTTCTCACTCATGTCAATCTGTGACATGT +
Preference number: 6 (lower is better)
Translates to: HPHRPQKTCPGH*LLSHSCQSVTC
Trigger: ACATGTCACAGATTGACATGAGTGAGAAAGCAAGCAGTGACCTGGACATGTCTTCTGAGGTCGATGTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp ATCGTGAACCCCTCTCTGGATGATGTCCCGGGAAGTTaGTGTGTCTGGTATTCGGTTCAGACTTCTAGTATA +
Preference number: 6 (lower is better)
Translates to: IVNPSLDDVPGS*CVWYSVQTSSI
Trigger: TATACTAGAAGTCTGAACCGAATACCAGACACAGCAACTTCCCGGGACATCATCCAGAGAGGGGTTCACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS GCA 72 bp GCCAATGGCAGCAGATTTTGGAATTTTACCCAGTGTTaGAGAGCCACTTGTTATGGTTGCTCCACTGCTGGT +
Preference number: 6 (lower is better)
Translates to: ANGSRFWNFTQC*RATCYGCSTAG
Trigger: ACCAGCAGTGGAGCAACCATAACAAGTGGCTCTGCAACACTGGGTAAAATTCCAAAATCTGCTGCCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp CGGTGGCCGAGTAGGCTTAGCTGTGTTACCAGTTTCTaGCTTCAACCGGTCATTTTCAGCTTTCAGTATTTC +
Preference number: 6 (lower is better)
Translates to: RWPSRLSCVTSF*LQPVIFSFQYF
Trigger: GAAATACTGAAAGCTGAAAATGACCGGTTGAAGGCAGAAACTGGTAACACAGCTAAGCCTACTCGGCCACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000548948.5
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp AATGAGAACGCAACCACTCTTTGCCCTCTTCTTGGTTaGCCTGCCGAGATGATGGGGTATATCTTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: NENATTLCPLLG*PAEMMGYIFLR
Trigger: TCTCAGAAAGATATACCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550788.1
ENST00000644176.1
CDS CCA 72 bp AATGAGAACGCAACCACTCTTTGCCCTCTTCTTGGTTaGCCTGCCGAGATGATGGGGTATATCTTCGAAATG +
Preference number: 6 (lower is better)
Translates to: NENATTLCPLLG*PAEMMGYIFEM
Trigger: CATTTCGAAGATATACCCCATCATCTCGGCAGGCCAACCAAGAAGAGGGCAAAGAGTGGTTGCGTTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552895.5
CDS CAA 72 bp GATTTCACACCCTCAGTATTAGGTGCAGAGGCAGATTaGCCACCTGCCTTGGCACCAAACAACCTTCGAAAT +
Preference number: 6 (lower is better)
Translates to: DFTPSVLGAEAD*PPALAPNNLRN
Trigger: ATTTCGAAGGTTGTTTGGTGCCAAGGCAGGTGGCAAATCTGCCTCTGCACCTAATACTGAGGGTGTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 72 bp TATGCTTGTAGATCACAGGGCCATTTTGTCGTTTCTTaGGTGGCCAGACAAGGGGTGACGCTGAAGCAGATT +
Preference number: 6 (lower is better)
Translates to: YACRSQGHFVVS*VARQGVTLKQI
Trigger: AATCTGCTTCAGCGTCACCCCTTGTCTGGCCACCAAAGAAACGACAAAATGGCCCTGTGATCTACAAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS CAA 90 bp TGGTTTTTCTCCCTGCATTTGACTTCCCGCCAATGGCAGCAGATTTaGGAATTTTACCCAGTGTTGCAGAGCCACTTGTTATGGTTGCTC +
Preference number: 6 (lower is better)
Translates to: WFFSLHLTSRQWQQI*EFYPVLQSHLLWLL
Trigger: GAGCAACCATAACAAGTGGCTCTGCAACACTGGGTAAAATTCCAAAATCTGCTGCCATTGGCGGGAAGTCAAATGCAGGGAGAAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS TCA 72 bp TGTTATGGTTGCTCCACTGCTGGTGATCATGGCAGATaGCCCTACTCCACTTGGTTTCTTAAAGCCAAAGGA +
Preference number: 6 (lower is better)
Translates to: CYGCSTAGDHGR*PYSTWFLKAKG
Trigger: TCCTTTGGCTTTAAGAAACCAAGTGGAGTAGGGTCATCTGCCATGATCACCAGCAGTGGAGCAACCATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS TCA 72 bp TTTGAGCGCATCATGCTGGGCCCGGGAAGGTTAAACTaGGACAAATTTGTTGGGCTCACCAAGTTAGAAAAG +
Preference number: 6 (lower is better)
Translates to: FERIMLGPGRLN*DKFVGLTKLEK
Trigger: CTTTTCTAACTTGGTGAGCCCAACAAATTTGTCTCAGTTTAACCTTCCCGGGCCCAGCATGATGCGCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp AGCATATTCATCAGGGGATCTCCTTCTGTGTCAGTTTaGGGAATGTGCTTTGAGGTTGTGGCTTCCTTAGTG +
Preference number: 6 (lower is better)
Translates to: SIFIRGSPSVSV*GMCFEVVASLV
Trigger: CACTAAGGAAGCCACAACCTCAAAGCACATTCCGCAAACTGACACAGAAGGAGATCCCCTGATGAATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp CTTGCTTTCTCCATGGTTATAGGCTTAGATAAGGACTaGGAAGGGCTCCCCTTGGTAGTCCTGAATTTCTCA +
Preference number: 6 (lower is better)
Translates to: LAFSMVIGLDKD*EGLPLVVLNFS
Trigger: TGAGAAATTCAGGACTACCAAGGGGAGCCCTTCCCAGTCCTTATCTAAGCCTATAACCATGGAGAAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550673.1
CDS CCA 72 bp GTAGATTCAAGAGATGAATCCAAAATGTCTTCATGGTaGCTGGTGCTTTCGCTGTCGCAGCTTTGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: VDSRDESKMSSW*LVLSLSQLCVL
Trigger: GAGCACACAAAGCTGCGACAGCGAAAGCACCAGCCACCATGAAGACATTTTGGATTCATCTCTTGAATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS CCA 72 bp AGGGTAGATTCAAGAGATGAATCCAAAATGTCTTCATaGTGGCTGGTGCTTTCGCTGTCGCAGCTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: RVDSRDESKMSS*WLVLSLSQLCV
Trigger: CACACAAAGCTGCGACAGCGAAAGCACCAGCCACCATGAAGACATTTTGGATTCATCTCTTGAATCTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp GTTATAGGCTTAGATAAGGACTGGGAAGGGCTCCCCTaGGTAGTCCTGAATTTCTCAGACTCTTTGCTTGCT +
Preference number: 6 (lower is better)
Translates to: VIGLDKDWEGLP*VVLNFSDSLLA
Trigger: AGCAAGCAAAGAGTCTGAGAAATTCAGGACTACCAAGGGGAGCCCTTCCCAGTCCTTATCTAAGCCTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS CAA 72 bp CCACATCGACCTCAGAAGACATGTCCAGGTCACTGCTaGCTTTCTCACTCATGTCAATCTGTGACATGTTTC +
Preference number: 6 (lower is better)
Translates to: PHRPQKTCPGHC*LSHSCQSVTCF
Trigger: GAAACATGTCACAGATTGACATGAGTGAGAAAGCAAGCAGTGACCTGGACATGTCTTCTGAGGTCGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 72 bp TCCCTGCATTTGACTTCCCGCCAATGGCAGCAGATTTaGGAATTTTACCCAGTGTTGCAGAGCCACTTGTTA +
Preference number: 6 (lower is better)
Translates to: SLHLTSRQWQQI*EFYPVLQSHLL
Trigger: TAACAAGTGGCTCTGCAACACTGGGTAAAATTCCAAAATCTGCTGCCATTGGCGGGAAGTCAAATGCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp AAGCTTATAACATCTGTAGTTAAGTCTGAGGGTTTATaGAAGAGAGGGCTGCTGCTGCCGCTTAGCCCACCA +
Preference number: 6 (lower is better)
Translates to: KLITSVVKSEGL*KRGLLLPLSPP
Trigger: TGGTGGGCTAAGCGGCAGCAGCAGCCCTCTCTTCAATAAACCCTCAGACTTAACTACAGATGTTATAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS TCA 72 bp CTGGTGAGGGAAAGATTGGTCAGAGACTTTTGTTTCTaGAGGCAAGCTCCCTTTCTCCTTACTTCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: LVRERLVRDFCF*RQAPFLLTSLL
Trigger: GAGCAAAGAAGTAAGGAGAAAGGGAGCTTGCCTTCAGAAACAAAAGTCTCTGACCAATCTTTCCCTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS GCA 72 bp TTGACTGGTTGCAATTCCACTGTGATTAGACTGAGTTaGATATCTGGCTGCCAGACTGGACTGCATATCTTG +
Preference number: 6 (lower is better)
Translates to: LTGCNSTVIRLS*ISGCQTGLHIL
Trigger: CAAGATATGCAGTCCAGTCTGGCAGCCAGATATGCAACTCAGTCTAATCACAGTGGAATTGCAACCAGTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
CDS GCA 72 bp GACTCTTTGCTTGCTGTGCTGCCAGGTGAAATGGTTTaGTTTACTGTTGGAACTTTAGAGCCTGGTTTTGGA +
Preference number: 6 (lower is better)
Translates to: DSLLAVLPGEMV*FTVGTLEPGFG
Trigger: TCCAAAACCAGGCTCTAAAGTTCCAACAGTAAAGCAAACCATTTCACCTGGCAGCACAGCAAGCAAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS CAA 72 bp GACGGAATTAAGCTTTCCTTCTTAGCTGCTGTTGTCTaGCTGCCCTTAGGGATCAAGCTTGCAATTTTGGAG +
Preference number: 6 (lower is better)
Translates to: DGIKLSFLAAVV*LPLGIKLAILE
Trigger: CTCCAAAATTGCAAGCTTGATCCCTAAGGGCAGCAAGACAACAGCAGCTAAGAAGGAAAGCTTAATTCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS TCA 72 bp GGAGGCTGCACGTTACCATTTACACCTGAAGACGATTaGGGTCCTTTGGAGGAATCTTTTTCGTTTCCATTT +
Preference number: 6 (lower is better)
Translates to: GGCTLPFTPEDD*GPLEESFSFPF
Trigger: AAATGGAAACGAAAAAGATTCCTCCAAAGGACCTCAATCGTCTTCAGGTGTAAATGGTAACGTGCAGCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS TCA 72 bp TGCAACCAGCTCTCTCCGCAGTTTATGGATTTGCTCTaGATGAGCCTTTTCTTCAGCTGTAGAGTAAAGAGA +
Preference number: 6 (lower is better)
Translates to: CNQLSPQFMDLL*MSLFFSCRVKR
Trigger: TCTCTTTACTCTACAGCTGAAGAAAAGGCTCATTCAGAGCAAATCCATAAACTGCGGAGAGAGCTGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp TCTGTTTCAGTAAGTTCCAAAGGTCTTGAAGAACAGTaGTGTGACCCAGTAGTGCCAAGATTTGGTATCGGA +
Preference number: 6 (lower is better)
Translates to: SVSVSSKGLEEQ*CDPVVPRFGIG
Trigger: TCCGATACCAAATCTTGGCACTACTGGGTCACAGCACTGTTCTTCAAGACCTTTGGAACTTACTGAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS GCA 72 bp TCTTCAGCTGCAGAATTATCTCTGCCTCAGCTTCTGTaGATTCACAGATCCGAGATCTATGCTTGTAGATCA +
Preference number: 6 (lower is better)
Translates to: SSAAELSLPQLL*IHRSEIYACRS
Trigger: TGATCTACAAGCATAGATCTCGGATCTGTGAATGCACAGAAGCTGAGGCAGAGATAATTCTGCAGCTGAAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397909.7
CDS CCA 72 bp TGCTTTCGCTGTCGCAGCTTTGTGTGCTCGAGTAATTaGCTGCTTCTTGGAGTTTCATTAGCATATTCATCA +
Preference number: 6 (lower is better)
Translates to: CFRCRSFVCSSN*LLLGVSLAYSS
Trigger: TGATGAATATGCTAATGAAACTCCAAGAAGCAGCCAATTACTCGAGCACACAAAGCTGCGACAGCGAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000551162.1
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp TTCCTTGGAGGGGTTTCTTCTCTCCAAATTCACAGGTaGATTTTAACGCAAGCTGACAAGAAAGCATGGAGC +
Preference number: 6 (lower is better)
Translates to: FLGGVSSLQIHR*ILTQADKKAWS
Trigger: GCTCCATGCTTTCTTGTCAGCTTGCGTTAAAATCAACCTGTGAATTTGGAGAGAAGAAACCCCTCCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS TCA 72 bp GTTTGCCAAATAGGTCTTTCCAGTACCACTCGGTCCTaGGAGTATAATTCTGTGATGCTCCATCAACAAGTT +
Preference number: 6 (lower is better)
Translates to: VCQIGLSSTTRS*EYNSVMLHQQV
Trigger: AACTTGTTGATGGAGCATCACAGAATTATACTCTCAGGACCGAGTGGTACTGGAAAGACCTATTTGGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp GGTTTTTCCACTAACACCAATGGATCCTATCAAATATaGCTGAGATTTTTGGTCCTTTGCTCGACCATAGCC +
Preference number: 6 (lower is better)
Translates to: GFSTNTNGSYQI*LRFLVLCSTIA
Trigger: GGCTATGGTCGAGCAAAGGACCAAAAATCTCAGGCATATTTGATAGGATCCATTGGTGTTAGTGGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000548948.5
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1
CDS TCA 72 bp TTGGAGCCATCTCTGTCACCTGATCCTTCTCTTCTTTaGCTGGTTTTTCAGTGCAAACTTTATTTTTGTCCC +
Preference number: 6 (lower is better)
Translates to: LEPSLSPDPSLL*LVFQCKLYFCP
Trigger: GGGACAAAAATAAAGTTTGCACTGAAAAACCAGTCAAAGAAGAGAAGGATCAGGTGACAGAGATGGCTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
CDS TCA 72 bp TTTCCAGTACCACTCGGTCCTGAGAGTATAATTCTGTaGTGCTCCATCAACAAGTTAAAGTACCTTTGGGTA +
Preference number: 6 (lower is better)
Translates to: FPVPLGPESIIL*CSINKLKYLWV
Trigger: TACCCAAAGGTACTTTAACTTGTTGATGGAGCATCACAGAATTATACTCTCAGGACCGAGTGGTACTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp TCAGATTCCTTTTGTTCCGCTGTCATAGTTAGACTTTaGAATCGGCCAGTCATATTCCCTAAGCTCTTTTCA +
Preference number: 6 (lower is better)
Translates to: SDSFCSAVIVRL*NRPVIFPKLFS
Trigger: TGAAAAGAGCTTAGGGAATATGACTGGCCGATTGCAAAGTCTAACTATGACAGCGGAACAAAAGGAATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS GCA 72 bp AATTTTAATTCCTTTTCTCTGAGCTCGCTCTTCAGCTaGAGAATTATCTCTGCCTCAGCTTCTGTGCATTCA +
Preference number: 6 (lower is better)
Translates to: NFNSFSLSSLFS*RIISASASVHS
Trigger: TGAATGCACAGAAGCTGAGGCAGAGATAATTCTGCAGCTGAAGAGCGAGCTCAGAGAAAAGGAATTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000548948.5
ENST00000550788.1
ENST00000552895.5
ENST00000644176.1
CDS TCA 72 bp TTCTCTCCAAATTCACAGGTTGATTTTAACGCAAGCTaGCAAGAAAGCATGGAGCTCTCTGTTTCAGTAAGT +
Preference number: 6 (lower is better)
Translates to: FSPNSQVDFNAS*QESMELSVSVS
Trigger: ACTTACTGAAACAGAGAGCTCCATGCTTTCTTGTCAGCTTGCGTTAAAATCAACCTGTGAATTTGGAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
CDS GCA 72 bp GTCCCACGAAGACTGGACATAGTCTCTTCTAAATTCTaGCTCAAGTCTGCTATGTTTTTAACTGTTCTCATT +
Preference number: 6 (lower is better)
Translates to: VPRRLDIVSSKF*LKSAMFLTVLI
Trigger: AATGAGAACAGTTAAAAACATAGCAGACTTGAGGCAGAATTTAGAAGAGACTATGTCCAGTCTTCGTGGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000644176.1
CDS CAA 72 bp AAGAGACGTCTTATTACACCATCTAAGACATCCCACTaGGTTTTTCCACTAACACCAATGGATCCTATCAAA +
Preference number: 6 (lower is better)
Translates to: KRRLITPSKTSH*VFPLTPMDPIK
Trigger: TTTGATAGGATCCATTGGTGTTAGTGGAAAAACCAAGTGGGATGTCTTAGATGGTGTAATAAGACGTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1
CDS CAA 72 bp CTTCCAGTGGCTCCTTCCTTTCAATTGGACTTCATATaGTCTTGTTACACTGTGATTGTAACTGATCCATTT +
Preference number: 6 (lower is better)
Translates to: LPVAPSFQLDFI*SCYTVIVTDPF
Trigger: AAATGGATCAGTTACAATCACAGTGTAACAAGACAATATGAAGTCCAATTGAAAGGAAGGAGCCACTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS TCA 72 bp TCAGCAGTACTTACAAATATTTTGCTCGAATATATCTaGAGCAGAAAAGAGTTCACCAAAGACTCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SAVLTNILLEYI*SRKEFTKDSPP
Trigger: TGGAGGAGAGTCTTTGGTGAACTCTTTTCTGCTTCAGATATATTCGAGCAAAATATTTGTAAGTACTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CAA 72 bp ATTGAGGTCCTTTGGAGGAATCTTTTTCGTTTCCATTaGCATAATTTGGAGGCTTGTTTTTGTCAATGCTGT +
Preference number: 6 (lower is better)
Translates to: IEVLWRNLFRFH*HNLEACFCQCC
Trigger: ACAGCATTGACAAAAACAAGCCTCCAAATTATGCAAATGGAAACGAAAAAGATTCCTCCAAAGGACCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS CAA 90 bp TGCATGATTCTTCCAGTGGCTCCTTCCTTTCAATTGGACTTCATATaGTCTTGTTACACTGTGATTGTAACTGATCCATTTGATTTTGAT +
Preference number: 6 (lower is better)
Translates to: CMILPVAPSFQLDFI*SCYTVIVTDPFDFD
Trigger: ATCAAAATCAAATGGATCAGTTACAATCACAGTGTAACAAGACAATATGAAGTCCAATTGAAAGGAAGGAGCCACTGGAAGAATCATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644176.1
CDS CCA 72 bp TTTGGAGGAATCTTTTTCGTTTCCATTTGCATAATTTaGAGGCTTGTTTTTGTCAATGCTGTTAAAGCTCTG +
Preference number: 6 (lower is better)
Translates to: FGGIFFVSICII*RLVFVNAVKAL
Trigger: CAGAGCTTTAACAGCATTGACAAAAACAAGCCTCCAAATTATGCAAATGGAAACGAAAAAGATTCCTCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000549464.5
ENST00000550042.2
ENST00000550503.1
CDS CAA 72 bp AATTCTGTGATGCTCCATCAACAAGTTAAAGTACCTTaGGGTAATTGGTTTAGGAATCAGCGTATCAAAAAC +
Preference number: 6 (lower is better)
Translates to: NSVMLHQQVKVP*GNWFRNQRIKN
Trigger: GTTTTTGATACGCTGATTCCTAAACCAATTACCCAAAGGTACTTTAACTTGTTGATGGAGCATCACAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397909.7
ENST00000536525.6
ENST00000550788.1
ENST00000552300.1
ENST00000552895.5
ENST00000644176.1