RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAGA (Homo sapiens)

Ensembl gene IDs: ENSG00000198951

Ensembl transcript IDs: ENST00000396398.8, ENST00000402937.1, ENST00000403363.5

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTaGCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCC +
Preference number: 1 (lower is better)
Translates to: GSVTEQAWGAENLPT*PGHAKAPWSRLSGA
Trigger: GGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CCA 90 bp GGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATaGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAG +
Preference number: 1 (lower is better)
Translates to: GAENLPTCPGHAKAP*SRLSGATTACHMSQ
Trigger: CTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR TCA 90 bp CTTGGACAGGGCATAGAACCTGGCCGTGAGATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCC +
Preference number: 1 (lower is better)
Translates to: LGQGIEPGREIALWV*WGQSPSRPGEQRTS
Trigger: GGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTGCAATCTCACGGCCAGGTTCTATGCCCTGTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR GCA 90 bp GGAGTATGGGAGATCCACCCAGAAAATACTCCTTGGGCAGCACAGTaGAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGG +
Preference number: 1 (lower is better)
Translates to: GVWEIHPENTPWAAQ*KAWGTGCSCIQSPR
Trigger: CCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGGAGTATTTTCTGGGTGGATCTCCCATACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CCA 90 bp CCCAGAAAATACTCCTTGGGCAGCACAGTGCAAGGCCTGGGGCACTaGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTAGGTTG +
Preference number: 1 (lower is better)
Translates to: PRKYSLGSTVQGLGH*VLLHSKPKEDLARL
Trigger: CAACCTAGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGGAGTATTTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR TCA 90 bp GTTTCCAAGAGGGTTTACGCTTGGACAGGGCATAGAACCTGGCCGTaGGATTGCACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCC +
Preference number: 1 (lower is better)
Translates to: VSKRVYAWTGHRTWP*DCTLGMMGSVTEQA
Trigger: GGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTGCAATCTCACGGCCAGGTTCTATGCCCTGTCCAAGCGTAAACCCTCTTGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR TCA 90 bp AAGAACAGGTTTATTGGTGACCTGAGGGAGCCAAGGTCTCCTTTGTaGCCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGG +
Preference number: 1 (lower is better)
Translates to: KNRFIGDLREPRSPL*PSLPGGIRLQGPLW
Trigger: CCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGACCTTGGCTCCCTCAGGTCACCAATAAACCTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CCA 90 bp TATGAACAAGACCCAAAGGCAGAGCTATGCACGGAGGGGCAGGCCTaGGATGAGGTAGGCTTCTGTCCTAAGTTTCTCAACAGCCTCAAG +
Preference number: 1 (lower is better)
Translates to: YEQDPKAELCTEGQA*DEVGFCPKFLNSLK
Trigger: CTTGAGGCTGTTGAGAAACTTAGGACAGAAGCCTACCTCATCCCAGGCCTGCCCCTCCGTGCATAGCTCTGCCTTTGGGTCTTGTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CCA 90 bp CCTGGGTGTGAGGCAAGTCTGGCATCTCTAGGAAGTACAATCTTCTaGTCACTTTGGAAAAGGAGGGGCCAGACGATGCCAGACATCATC +
Preference number: 1 (lower is better)
Translates to: PGCEASLASLGSTIF*SLWKRRGQTMPDII
Trigger: GATGATGTCTGGCATCGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGATTGTACTTCCTAGAGATGCCAGACTTGCCTCACACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR TCA 90 bp GGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATaGTCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCT +
Preference number: 1 (lower is better)
Translates to: GIRLQGPLWVEKPIT*SMGIPGKRSDLSTP
Trigger: AGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CCA 90 bp GAGGCAAGTCTGGCATCTCTAGGAAGTACAATCTTCTGGTCACTTTaGAAAAGGAGGGGCCAGACGATGCCAGACATCATCCATAGAGGT +
Preference number: 1 (lower is better)
Translates to: EASLASLGSTIFWSL*KRRGQTMPDIIHRG
Trigger: ACCTCTATGGATGATGTCTGGCATCGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGATTGTACTTCCTAGAGATGCCAGACTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR TCA 90 bp CCAGGTCCATATTACAACTACTTGATTAAAGAACAGGTTTATTGGTaGCCTGAGGGAGCCAAGGTCTCCTTTGTGACCCTCACTCCCAGG +
Preference number: 1 (lower is better)
Translates to: PGPYYNYLIKEQVYW*PEGAKVSFVTLTPR
Trigger: CCTGGGAGTGAGGGTCACAAAGGAGACCTTGGCTCCCTCAGGTCACCAATAAACCTGTTCTTTAATCAAGTAGTTGTAATATGGACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR TCA 90 bp TGTAAGTTTTTACACCATACCCTAAATACAAGGACCTCAGAACCCTaGGGAGTATGGGAGATCCACCCAGAAAATACTCCTTGGGCAGCA +
Preference number: 1 (lower is better)
Translates to: CKFLHHTLNTRTSEP*GVWEIHPENTPWAA
Trigger: TGCTGCCCAAGGAGTATTTTCTGGGTGGATCTCCCATACTCCTCAGGGTTCTGAGGTCCTTGTATTTAGGGTATGGTGTAAAAACTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTGTCACCGAGCAGGCCTaGGGAGCAGAGAACCTCCCC +
Preference number: 2 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLAVTEQA*GAENLP
Trigger: GGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR GCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTAGGAGGCTGGCGAGTTaGTCAGCAACGTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLARRLAS*SATSVG
Trigger: CCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCT...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR GCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGAGAACCTCCCCACTTaGCCTGGGCATGCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQEENLPT*PGHAKA
Trigger: AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CAA 90 bp CTCAGAACCCTGAGGAGTATGGGAGATCCACCCAGAAAATACTCCTaGGGCAGCACAGTGCAAGGCCTGGGGCACTGGGTGCTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: LRTLRSMGDPPRKYS*GSTVQGLGHWVLLH
Trigger: ATGCAGGAGCACCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGGAGTATTTTCTGGGTGGATCTCCCATACTCCTCAGGGTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR TCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTCACATCTGGGGAATATaGACCTCCTTTGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLAHIWGI*TSFAAR
Trigger: CCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTG...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CCA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGCATGCCAAGGCTCCATaGTCTAGGCTCAGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMHAKAP*SRLSGA
Trigger: GGCACCACTGAGCCTAGACCATGGAGCCTTGGCATG...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR CCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGAAGAGGGTTTACGCTTaGACAGGGCATAGAACCTGG +
Preference number: 2 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQKRVYA*TGHRTW
Trigger: CCAGGTTCTATGCCCTGTCCAAGCGTAAACCCTCTT...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CAA 90 bp TCTCCAAAGGGGAGAGCCACCAGGGAAGACAAGTGCCCTGTAGCCTaGGCTAAAAGAGGAGGGCTTGGGAAATACGGACCAAAGCAAGAC +
Preference number: 2 (lower is better)
Translates to: SPKGRATREDKCPVA*AKRGGLGKYGPKQD
Trigger: GTCTTGCTTTGGTCCGTATTTCCCAAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTTGTCTTCCCTGGTGGCTCTCCCCTTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR TCA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGC +
Preference number: 2 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRIALWV*WGQSPS
Trigger: GCTCGGTGACTGACCCCATCATACCCAAAGTGCAAT...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR CCA 90 bp CATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGACCTCCCCACTTGCCCTaGGCATGCCAAGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: HDPWAFLARGQISLLLIRPPHLP*ACQGSM
Trigger: CATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGG...TCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR TCA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGC +
Preference number: 2 (lower is better)
Translates to: TPRWYQAARPSMGRKANHIALWV*WGQSPS
Trigger: GCTCGGTGACTGACCCCATCATACCCAAAGTGCAAT...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR TCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGCAGAGGCTAGAGTCCTaGTGGGCATGGAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: YQAARPSMGRKANHMIHGQRLES*WAWSSG
Trigger: TCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTG...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR TCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTATCATTCCTTCACTTTaGCTGTTACCCCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLAIIPSL*LLPLSL
Trigger: TAAGGACAGGGGTAACAGTCAAAGTGAAGGAATGAT...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR GCA 90 bp CATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAGAGAACCTCCCCACTTaGCCTGGGCATGCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: HDPWAFLARGQISLLLIRENLPT*PGHAKA
Trigger: AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC...TCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR CCA 90 bp TTTGTGGACACATCTGGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGACATGCCAAGGCTCCATaGTCTAGGCTCAGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: FVDTSGEYEPPLQPGWERHAKAP*SRLSGA
Trigger: GGCACCACTGAGCCTAGACCATGGAGCCTTGGCATG...TCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CCA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGCAATCACATGATCCATaGGCATTCCTGGCAAGAGGT +
Preference number: 2 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMQSHDP*AFLARG
Trigger: ACCTCTTGCCAGGAATGCCCATGGATCATGTGATTG...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR CCA 90 bp AAAGCCAATCACATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACGCTCAGCAACGTCTGTaGGGCTGCGCACATGGAAGT +
Preference number: 2 (lower is better)
Translates to: KANHMIHGHSWQEVRSLYAQQRL*GCAHGS
Trigger: ACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGC...GTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR TCA 90 bp TTTGTGGACACATCTGGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGC +
Preference number: 2 (lower is better)
Translates to: FVDTSGEYEPPLQPGWERIALWV*WGQSPS
Trigger: GCTCGGTGACTGACCCCATCATACCCAAAGTGCAAT...TCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR TCA 90 bp TCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTCAGAGGCTAGAGTCCTaGTGGGCATGGAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: SMGIPGKRSDLSTPNSKTQRLES*WAWSSG
Trigger: TCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTG...AGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR GCA 90 bp GTAAAGACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTCCTTGGGCAGCACAGTaGAAGGCCTGGGGCACTGGG +
Preference number: 2 (lower is better)
Translates to: VKTCSYLGLKGKGINWSSPWAAQ*KAWGTG
Trigger: CCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGG...ACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGTCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CCA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGACCTCCCCACTTGCCCTaGGCATGCCAAGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRPPHLP*ACQGSM
Trigger: CATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGG...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR CCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGAAGAGGGTTTACGCTTaGACAGGGCATAGAACCTGG +
Preference number: 2 (lower is better)
Translates to: YQAARPSMGRKANHMIHGKRVYA*TGHRTW
Trigger: CCAGGTTCTATGCCCTGTCCAAGCGTAAACCCTCTT...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR CCA 90 bp ACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTCCAGGCGCTCAGCAACGTCTGTaGGGCTGCGCACATGGAAGT +
Preference number: 2 (lower is better)
Translates to: TCSYLGLKGKGINWSSPGAQQRL*GCAHGS
Trigger: ACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGC...GCCTGGACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CCA 90 bp CAATCTTCTGGTCACTTTGGAAAAGGAGGGGCCAGACGATGCCAGACATCATCCCAATCACATGATCCATaGGCATTCCTGGCAAGAGGT +
Preference number: 2 (lower is better)
Translates to: QSSGHFGKGGARRCQTSSQSHDP*AFLARG
Trigger: ACCTCTTGCCAGGAATGCCCATGGATCATGTGATTG...GGATGATGTCTGGCATCGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR GCA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAAGGAGGCTGGCGAGTTaGTCAGCAACGTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRRRLAS*SATSVG
Trigger: CCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCT...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR-3UTR GCA 90 bp TCTCAACAGCCTCAAGACATCAACTGGGGAAAGGAACTTTCTCTGGTGACCCTAACCAGGGAAGACAAGTaGCCTGTAGCCTTGGCTAAA +
Preference number: 2 (lower is better)
Translates to: SQQPQDINWGKELSLVTLTREDK*PVALAK
Trigger: TTTAGCCAAGGCTACAGGGCACTTGTCTTCCCTGGT...TAGGGTCACCAGAGAAAGTTCCTTTCCCCAGTTGATGTCTTGAGGCTGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CAA 90 bp AAGAGGGACAGGAAATCAATTTTAAGACACAACTCCTGGACAGGTTaGTGGACACATCTGGGGAATATGAACCTCCTTTGCAGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: KRDRKSILRHNSWTG*WTHLGNMNLLCSQV
Trigger: AACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAAAATTGATTTCCTGTCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CAA 90 bp ATACGGACCAAAGCAAGACAGGCAAGAACCCATCATTCCTTCACTTaGACTGTTACCCCTGTCCTTAGGAAGAGGGACAGGAAATCAATT +
Preference number: 2 (lower is better)
Translates to: IRTKARQARTHHSFT*TVTPVLRKRDRKSI
Trigger: AATTGATTTCCTGTCCCTCTTCCTAAGGACAGGGGTAACAGTCAAAGTGAAGGAATGATGGGTTCTTGCCTGTCTTGCTTTGGTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR GCA 90 bp ACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTCCAGGCAGGCCACAGGAAAATTaGCCCAAAAGAAGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: TCSYLGLKGKGINWSSPGRPQEN*PKRSFQ
Trigger: TTGGAAACTTCTTTTGGGGCAATTTTCCTGTGGCCT...GCCTGGACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR GCA 90 bp GTAAAGACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTAATATGAACCTCCTTTaGAGCCAGGTTGGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: VKTCSYLGLKGKGINWSSNMNLL*SQVGRE
Trigger: TTCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATT...ACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGTCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR GCA 72 bp ACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTaGCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTC +
Preference number: 3 (lower is better)
Translates to: TEQAWGAENLPT*PGHAKAPWSRL
Trigger: GAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR GCA 72 bp GGAGGCTGGCGAGTTGCTCAGCAACGTCTGTGGGGCTaGGCACATGGAAGTAGAGGCCAGGAAGGCCACAGG +
Preference number: 3 (lower is better)
Translates to: GGWRVAQQRLWG*AHGSRGQEGHR
Trigger: CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR GCA 72 bp GTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTTaGTCAGCAACGTCTGTGGGGCTGCGCACATGGAAG +
Preference number: 3 (lower is better)
Translates to: VLMGMELRRLAS*SATSVGLRTWK
Trigger: CTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CCA 72 bp AGCTCAGGAGGCTGGCGAGTTGCTCAGCAACGTCTGTaGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGC +
Preference number: 3 (lower is better)
Translates to: SSGGWRVAQQRL*GCAHGSRGQEG
Trigger: GCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCTGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CCA 72 bp ACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCCTaGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: TLGMMGSVTEQA*GAENLPTCPGH
Trigger: ATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR TCA 72 bp GGCATAGAACCTGGCCGTGAGATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: GIEPGREIALWV*WGQSPSRPGEQ
Trigger: CTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTGCAATCTCACGGCCAGGTTCTATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CCA 72 bp TACTCCTTGGGCAGCACAGTGCAAGGCCTGGGGCACTaGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTA +
Preference number: 3 (lower is better)
Translates to: YSLGSTVQGLGH*VLLHSKPKEDL
Trigger: TAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CAA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTAACCTGGCCGTGAGATaGCACTTTGGGTATGATGGG +
Preference number: 3 (lower is better)
Translates to: ARSEARVLMGMELRRLASNLAVR*HFGYDG
Trigger: CCCATCATACCCAAAGTGCAATCTCACGGCCAGGTT...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR GCA 72 bp CTCTCTCCAAAGGGGAGAGCCACCAGGGAAGACAAGTaGCCTGTAGCCTTGGCTAAAAGAGGAGGGCTTGGG +
Preference number: 3 (lower is better)
Translates to: LSPKGRATREDK*PVALAKRGGLG
Trigger: CCCAAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTTGTCTTCCCTGGTGGCTCTCCCCTTTGGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR GCA 72 bp GAGATCCACCCAGAAAATACTCCTTGGGCAGCACAGTaGAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAA +
Preference number: 3 (lower is better)
Translates to: EIHPENTPWAAQ*KAWGTGCSCIQ
Trigger: TTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGGAGTATTTTCTGGGTGGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CCA 72 bp GACCCAAAGGCAGAGCTATGCACGGAGGGGCAGGCCTaGGATGAGGTAGGCTTCTGTCCTAAGTTTCTCAAC +
Preference number: 3 (lower is better)
Translates to: DPKAELCTEGQA*DEVGFCPKFLN
Trigger: GTTGAGAAACTTAGGACAGAAGCCTACCTCATCCCAGGCCTGCCCCTCCGTGCATAGCTCTGCCTTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CAA 90 bp TCAACAGCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGAACCTGGCCGTGAGATaGCACTTTGGGTATGATGGG +
Preference number: 3 (lower is better)
Translates to: STARSEARVLMGMELRRLNLAVR*HFGYDG
Trigger: CCCATCATACCCAAAGTGCAATCTCACGGCCAGGTT...CAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGCTGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR TCA 72 bp TTTCAGAGTCAACAGCAAGGTCAGAGGCTAGAGTCCTaGTGGGCATGGAGCTCAGGAGGCTGGCGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: FQSQQQGQRLES*WAWSSGGWRVA
Trigger: AGCAACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGCTGTTGACTCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CCA 72 bp AGAGCACAAGCTGCAGGACCTGGGAGCATTGCTACTTaGCCTCATTGTGTTGTCACCATCACCACTGCCAGC +
Preference number: 3 (lower is better)
Translates to: RAQAAGPGSIAT*PHCVVTITTAS
Trigger: GCTGGCAGTGGTGATGGTGACAACACAATGAGGCCAAGTAGCAATGCTCCCAGGTCCTGCAGCTTGTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR TCA 72 bp AGGGTTTACGCTTGGACAGGGCATAGAACCTGGCCGTaGGATTGCACTTTGGGTATGATGGGGTCAGTCACC +
Preference number: 3 (lower is better)
Translates to: RVYAWTGHRTWP*DCTLGMMGSVT
Trigger: GGTGACTGACCCCATCATACCCAAAGTGCAATCTCACGGCCAGGTTCTATGCCCTGTCCAAGCGTAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR TCA 72 bp CTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATaGTCCATGGGCATTCCTGGCAAGAGGTCAGATCTC +
Preference number: 3 (lower is better)
Translates to: LQGPLWVEKPIT*SMGIPGKRSDL
Trigger: GAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR CCA 72 bp GAGGCAAGTCTGGCATCTCTAGGAAGTACAATCTTCTaGTCACTTTGGAAAAGGAGGGGCCAGACGATGCCA +
Preference number: 3 (lower is better)
Translates to: EASLASLGSTIF*SLWKRRGQTMP
Trigger: TGGCATCGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGATTGTACTTCCTAGAGATGCCAGACTTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CAA 90 bp ACCCATCATTCCTTCACTTTGACTGTTACCCCTGTCCTTAGGAAGAGGGACAGGTGGGAGCATTGCTACTaGGCCTCATTGTGTTGTCAC +
Preference number: 3 (lower is better)
Translates to: THHSFTLTVTPVLRKRDRWEHCY*ASLCCH
Trigger: GTGACAACACAATGAGGCCAAGTAGCAATGCTCCCA...CCTGTCCCTCTTCCTAAGGACAGGGGTAACAGTCAAAGTGAAGGAATGATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CCA 72 bp GTAAGGGAATTAATTGGTCAAGTCCAGGCTCAACTCTaGCCCCCAACTCCCAAGTCCATGGTCTCAACTCAT +
Preference number: 3 (lower is better)
Translates to: VRELIGQVQAQL*PPTPKSMVSTH
Trigger: ATGAGTTGAGACCATGGACTTGGGAGTTGGGGGCCAGAGTTGAGCCTGGACTTGACCAATTAATTCCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR-3UTR CAA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAAAACCTGGCCGTGAGATaGCACTTTGGGTATGATGGG +
Preference number: 3 (lower is better)
Translates to: DPWAFLARGQISLLLIRKNLAVR*HFGYDG
Trigger: CCCATCATACCCAAAGTGCAATCTCACGGCCAGGTT...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
3UTR TCA 72 bp GCCTTCCTGGAGCTAGCAAGAGAAGGTGTTCCCACCTaGGACTATTCCATTTTGCCTGAACAGCACTATGAA +
Preference number: 3 (lower is better)
Translates to: AFLELAREGVPT*DYSILPEQHYE
Trigger: TTCATAGTGCTGTTCAGGCAAAATGGAATAGTCTCAGGTGGGAACACCTTCTCTTGCTAGCTCCAGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR GCA 72 bp TCTTCTGGTCACTTTGGAAAAGGAGGGGCCAGACGATaGCAGACATCATCCATAGAGGTGAGATTTGAATCC +
Preference number: 3 (lower is better)
Translates to: SSGHFGKGGARR*QTSSIEVRFES
Trigger: GGATTCAAATCTCACCTCTATGGATGATGTCTGGCATCGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR TCA 72 bp TTACACCATACCCTAAATACAAGGACCTCAGAACCCTaGGGAGTATGGGAGATCCACCCAGAAAATACTCCT +
Preference number: 3 (lower is better)
Translates to: LHHTLNTRTSEP*GVWEIHPENTP
Trigger: AGGAGTATTTTCTGGGTGGATCTCCCATACTCCTCAGGGTTCTGAGGTCCTTGTATTTAGGGTATGGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CCA 72 bp AAGAGGGACAGGAAATCAATTTTAAGACACAACTCCTaGACAGGTTTGTGGACACATCTGGGGAATATGAAC +
Preference number: 3 (lower is better)
Translates to: KRDRKSILRHNS*TGLWTHLGNMN
Trigger: GTTCATATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAAAATTGATTTCCTGTCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCCACTGGGGTCACGGCTaGCTGGCTAGCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSHWGHG*LASSAA
Trigger: GGCGGCCGAGCTAGCCAGGCAGCCGTGACCCCAGTG...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCGGGCAGCAGCCATCTTaGGGTACCCCTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSGQQPS*GTPGPA
Trigger: AGCGGGCCCAGGGGTACCCCAAGATGGCTGCTGCCC...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAGCAGGCTGAGGTGCTaGGCCAGGGGCACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSSRLRC*ARGTAG
Trigger: CCCAGCAGTGCCCCTGGCCCAGCACCTCAGCCTGCT...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGGGGCCGGCCACTGGCTaGAGTATGTCCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRGPATG*SMSWCS
Trigger: GGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCC...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCCCTTGGGCAGCACAGTaGAAGGCCTGGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSPWAAQ*KAWGTG
Trigger: CCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGG...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCCCCGCTCCTCGGGGGTaGAGAAGCAGCCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSPAPRG*RSSHPA
Trigger: AGCTGGATGGCTGCTTCTCCACCCCCGAGGAGCGGG...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCTCCGGGTTCCCGCCCTaGGCTCCCCAAAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSSGFPP*APQNRR
Trigger: TCTGCGGTTTTGGGGAGCCCAGGGCGGGAACCCGGA...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGGCACAGTGCAAGGCCTaGGGCACTGGGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRAQCKA*GTGCSC
Trigger: GCAGGAGCACCCAGTGCCCCAGGCCTTGCACTGTGC...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAAGGCCAGCCAGCCCATaGGTGGTGTCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPRPASP*VVSAGA
Trigger: GGCTCCTGCAGACACCACCCATGGGCTGGCTGGCCT...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCACCTGCCGCCGCTTCTaGCTCGAATCCGGTAACCTG +
Preference number: 4 (lower is better)
Translates to: VTEQAWGAENLPTCPGHATCRRF*LESGNL
Trigger: CAGGTTACCGGATTCGAGTCAGAAGCGGCGGCAGGT...GGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCGAGAACCTCCCCACTTaGCCTGGGCATGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RAGLGSREPPHLPWACQGENLPT*PGHAKA
Trigger: AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC...GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCGGGGTCACGGCTGCCTaGCTAGCTCGGCCGCCCTCA +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLGVTAA*LARPPS
Trigger: TGAGGGCGGCCGAGCTAGCCAGGCAGCCGTGACCCC...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGGGTAACCCATGCAGGTaGAGTTGCCCATGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRGNPCR*SCPCPR
Trigger: ACGCGGACATGGGCAACTTCACCTGCATGGGTTACC...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCACACTCGGCGAAGGTCTaGGCATCCTGGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPHSAKV*ASWTTL
Trigger: CAAGGTGGTCCAGGATGCTCAGACCTTCGCCGAGTG...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCCCTTGTCCAGTGTGGTaGCTGGGTAACCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: VTEQAWGAENLPTCPGHAPCPVW*LGNPCR
Trigger: CCTGCATGGGTTACCCAGGCACCACACTGGACAAGG...GGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGTCAGGGTCATTCCAGTaGCCAGGGCCGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQSGSFQ*PGPATG
Trigger: GCCAGTGGCCGGCCCTGGGCACTGGAATGACCCTGA...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCCAGCCAGCCCATaGGTGGTGTCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSRPASP*VVSAGA
Trigger: GGCTCCTGCAGACACCACCCATGGGCTGGCTGGCCT...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACGCATCAGGCGGCCACTaGCATCGCGACCACCGATCC +
Preference number: 4 (lower is better)
Translates to: GHAKAPWSRLSGATTACHASGGH*HRDHRS
Trigger: GGATCGGTGGTCGCGATGCCAGTGGCCGCCTGATGC...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGCCCGCTCCTCGGGGGTaGAGAAGCAGCCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRPAPRG*RSSHPA
Trigger: AGCTGGATGGCTGCTTCTCCACCCCCGAGGAGCGGG...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGCGATGGGGCGGCCTGTaGCATTCAGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRRWGGL*HSGQQP
Trigger: TGGCTGCTGCCCTGAATGCCACAGGCCGCCCCATCG...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGCCGCCTTCATAGGCTaGCCAGCTGCAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RPGEQRTSPLALGMPRLHAAFIG*PAAGEG
Trigger: GCCTTCTCCTGCAGCTGGCCAGCCTATGAAGGCGGC...ATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGCCCAGGGCCGGCCACTaGCTGCAGTATGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRPRAGH*LQYVLV
Trigger: CACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGG...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCACTGATGATGTCACCTaGGTAGACGTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VTEQAWGAENLPTCPGHATDDVT*VDVLGL
Trigger: GAGGCCCAGGACGTCTACTCAGGTGACATCATCAGT...GGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCCAGCCAGGAAAGGAATaGCATGAGGGAAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGLGSREPPHLPWACQGQPGKE*HEGSAW
Trigger: CCAAGCGCTTCCCTCATGGCATTCCTTTCCTGGCTG...GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTCATGAGGGAAGCGCTTaGGATCCGGCATCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSHEGSA*DPASGG
Trigger: GCCGCCTGATGCCGGATCCCAAGCGCTTCCCTCATG...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCACTGTAGTTCACCCTTaGGGGGAGGCCGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSTVVHP*GEAAFI
Trigger: TATGAAGGCGGCCTCCCCCCAAGGGTGAACTACAGT...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCACTGTAGTTCACCCTTaGGGGGAGGCCGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: VTEQAWGAENLPTCPGHATVVHP*GEAAFI
Trigger: TATGAAGGCGGCCTCCCCCCAAGGGTGAACTACAGT...GGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCGAACCAATTCAGGATaGAGAGCACGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRRTNSG*RARSTR
Trigger: CCTGGTGGAGCGTGCTCTCCATCCTGAATTGGTTCG...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTCCCAGGGCCGGCCACTaGCTGCAGTATGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ENLPTCPGHAKAPWSRLSPRAGH*LQYVLV
Trigger: CACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGG...ACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp AGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTAACCCATGCAGGTaGAGTTGCCCATGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: RPGEQRTSPLALGMPRLHGNPCR*SCPCPR
Trigger: ACGCGGACATGGGCAACTTCACCTGCATGGGTTACC...ATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGC +
Preference number: 4 (lower is better)
Translates to: RAGLGSREPPHLPWACQGIALWV*WGQSPS
Trigger: GCTCGGTGACTGACCCCATCATACCCAAAGTGCAAT...GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGGCCGGCCACTGGCTaGAGTATGTCCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQEGPATG*SMSWCS
Trigger: GGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCC...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGAGACCTCACACCCTCTaGAGTGCTGGGAGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQRPHTL*SAGSPE
Trigger: CTCGGGACTCCCAGCACTGCAGAGGGTGTGAGGTCT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCCCAAAGGCAGAGCTATaGACGGAGGGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLPKAEL*TEGQAW
Trigger: CCAGGCCTGCCCCTCCGTGCATAGCTCTGCCTTTGG...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRGPDQI*SACISC
Trigger: ACAGCTGATACACGCAGACCAGATCTGGTCAGGTCC...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTCAGCCAGCCCATGGGTaGTGTCTGCAGGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSQPAHG*CLQEPI
Trigger: AATGGGCTCCTGCAGACACCACCCATGGGCTGGCTG...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGCATCAGGCGGCCACTaGCATCGCGACCACCGATCC +
Preference number: 4 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQEASGGH*HRDHRS
Trigger: GGATCGGTGGTCGCGATGCCAGTGGCCGCCTGATGC...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAACGATGGGGCGGCCTGTaGCATTCAGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQERWGGL*HSGQQP
Trigger: TGGCTGCTGCCCTGAATGCCACAGGCCGCCCCATCG...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTTGCAGGAGAAGGCGATaGGGCGGCCTGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSCRRRR*GGLWHS
Trigger: TGAATGCCACAGGCCGCCCCATCGCCTTCTCCTGCA...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACGTCCAGGCTCAACTCTaGCCCCCAACTCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GHAKAPWSRLSGATTACHVQAQL*PPTPKS
Trigger: GGACTTGGGAGTTGGGGGCCAGAGTTGAGCCTGGAC...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTACCTGCCGCCGCTTCTaGCTCGAATCCGGTAACCTG +
Preference number: 4 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLATCRRF*LESGNL
Trigger: CAGGTTACCGGATTCGAGTCAGAAGCGGCGGCAGGT...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTCACTCGGCGAAGGTCTaGGCATCCTGGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLAHSAKV*ASWTTL
Trigger: CAAGGTGGTCCAGGATGCTCAGACCTTCGCCGAGTG...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp GAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTAGCAGCCATCCAGCTTaGGCATGTCTACCTTCCACT +
Preference number: 4 (lower is better)
Translates to: EQAWGAENLPTCPGHAKASSHPA*ACLPST
Trigger: AGTGGAAGGTAGACATGCTCAAGCTGGATGGCTGCT...AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTCCCATGGGTGGTGTCTaGAGGAGCCCATTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARSEARVLMGMELRRLASPMGGV*RSPLSS
Trigger: GCTGGACAATGGGCTCCTGCAGACACCACCCATGGG...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAGAACCTCCCCACTTaGCCTGGGCATGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQENLPT*PGHAKA
Trigger: AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTAGGAGGCTGGCGAGTTaGTCAGCAACGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ENLPTCPGHAKAPWSRLSRRLAS*SATSVG
Trigger: CCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCT...ACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCGCCTGGGGCACTGGGTaGTCCTGCATTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLAWGTG*SCIQSP
Trigger: TGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGC...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGTCCAGCATCAGCACCTaGGCCACATGTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRSSIST*ATCPSK
Trigger: CTTGCTGGGACATGTGGCCCAGGTGCTGATGCTGGA...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTCAGCCAGCCCATGGGTaGTGTCTGCAGGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: ENLPTCPGHAKAPWSRLSQPAHG*CLQEPI
Trigger: AATGGGCTCCTGCAGACACCACCCATGGGCTGGCTG...ACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGTCCAGTGTGGTGCCTaGGTAACCCATGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RPGEQRTSPLALGMPRLHVQCGA*VTHAGE
Trigger: TTCACCTGCATGGGTTACCCAGGCACCACACTGGAC...ATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACCCACCTTGTCCAGTGTaGTGCCTGGGTAACCCATGC +
Preference number: 4 (lower is better)
Translates to: GHAKAPWSRLSGATTACHPPCPV*CLGNPC
Trigger: GCATGGGTTACCCAGGCACCACACTGGACAAGGTGG...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTTGCAGGAGAAGGCGATaGGGCGGCCTGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: ENLPTCPGHAKAPWSRLSCRRRR*GGLWHS
Trigger: TGAATGCCACAGGCCGCCCCATCGCCTTCTCCTGCA...ACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCTGCAGGAGAAGGCGATaGGGCGGCCTGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLCRRRR*GGLWHS
Trigger: TGAATGCCACAGGCCGCCCCATCGCCTTCTCCTGCA...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGTCCACAGGGCCATCTaGGCCCGGGATTGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQVHRAI*ARDCSK
Trigger: CTTAGAGCAATCCCGGGCCCAGATGGCCCTGTGGAC...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCATGCCAAGGCTCCATaGTCTAGGCTCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQHAKAP*SRLSGA
Trigger: GGCACCACTGAGCCTAGACCATGGAGCCTTGGCATG...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAAGAGGGTTTACGCTTaGACAGGGCATAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSKRVYA*TGHRTW
Trigger: CCAGGTTCTATGCCCTGTCCAAGCGTAAACCCTCTT...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGACCCTCACTCCCAGGTaGTATCAGGCTGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQTLTPR*YQAARP
Trigger: GGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGT...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAACCTGCCGCCGCTTCTaGCTCGAATCCGGTAACCTG +
Preference number: 4 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQETCRRF*LESGNL
Trigger: CAGGTTACCGGATTCGAGTCAGAAGCGGCGGCAGGT...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTGGTCAGCCATCTCCATaGAGAGCTGTTCACTTATGC +
Preference number: 4 (lower is better)
Translates to: EQAWGAENLPTCPGHAKAGQPSP*RAVHLC
Trigger: GCATAAGTGAACAGCTCTTCATGGAGATGGCTGACC...AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCGGTAACCCATGCAGGTaGAGTTGCCCATGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLGNPCR*SCPCPR
Trigger: ACGCGGACATGGGCAACTTCACCTGCATGGGTTACC...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAACACTCGGCGAAGGTCTaGGCATCCTGGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQEHSAKV*ASWTTL
Trigger: CAAGGTGGTCCAGGATGCTCAGACCTTCGCCGAGTG...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCAGAGATTTTTCCTTGTaGATCCTGCGTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RAGLGSREPPHLPWACQGRDFSL*ILRPWM
Trigger: CATCCAGGGACGCAGGATTCACAAGGAAAAATCTCT...GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGATATCACAGACCCGGTaGAGTTCAGCTGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRISQTR*SSAGQG
Trigger: CCCTTGGCCAGCTGAACTTCACCGGGTCTGTGATAT...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGACTGATGATGTCACCTaGGTAGACGTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQTDDVT*VDVLGL
Trigger: GAGGCCCAGGACGTCTACTCAGGTGACATCATCAGT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCACCACATCACTACCCCTaGAGGGTTGATGATCACTGT +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPPHHYP*RVDDHC
Trigger: ACAGTGATCATCAACCCTTCAGGGGTAGTGATGTGG...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGCAGAGGCTAGAGTCCTaGTGGGCATGGAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQQRLES*WAWSSG
Trigger: TCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTG...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAGTTACTGGAGCTGGATaGTGGGTACATGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPVTGAG*WVHGGS
Trigger: TGAACCTCCATGTACCCAGCATCCAGCTCCAGTAAC...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTTCAGCAGCATCGCTCTaGACTCAGCTTCCGAGGACC +
Preference number: 4 (lower is better)
Translates to: ARSEARVLMGMELRRLASSAASL*TQLPRT
Trigger: GGTCCTCGGAAGCTGAGTCCAGAGCGATGCTGCTGA...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACGTCCAGTGTGGTGCCTaGGTAACCCATGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GHAKAPWSRLSGATTACHVQCGA*VTHAGE
Trigger: TTCACCTGCATGGGTTACCCAGGCACCACACTGGAC...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTGTCCAGTGTGGTGCCTaGGTAACCCATGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSVQCGA*VTHAGE
Trigger: TTCACCTGCATGGGTTACCCAGGCACCACACTGGAC...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGACCCGCTCCTCGGGGGTaGAGAAGCAGCCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRPAPRG*RSSHPA
Trigger: AGCTGGATGGCTGCTTCTCCACCCCCGAGGAGCGGG...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACCCAGCTCCTCACTGCTaGGACATCTCCAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GHAKAPWSRLSGATTACHPAPHC*DISRFL
Trigger: CAAGAACCTGGAGATGTCCCAGCAGTGAGGAGCTGG...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCAGCTCCTCACTGCTaGGACATCTCCAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQPAPHC*DISRFL
Trigger: CAAGAACCTGGAGATGTCCCAGCAGTGAGGAGCTGG...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCAATCACATGATCCATaGGCATTCCTGGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRQSHDP*AFLARG
Trigger: ACCTCTTGCCAGGAATGCCCATGGATCATGTGATTG...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTACCCTCACTCCCAGGTaGTATCAGGCTGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: HFGYDGVSHRAGLGSREPTLTPR*YQAARP
Trigger: GGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGT...AGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAATCTTCTGGTCACTTTaGAAAAGGAGGGGCCAGACG +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPIFWSL*KRRGQT
Trigger: CGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGAT...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGC +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQIALWV*WGQSPS
Trigger: GCTCGGTGACTGACCCCATCATACCCAAAGTGCAAT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTATTGCACTTTGGGTATaGTGGGGTCAGTCACCGAGC +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSIALWV*WGQSPS
Trigger: GCTCGGTGACTGACCCCATCATACCCAAAGTGCAAT...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp AGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGAAAAGCCAATCACATaGTCCATGGGCATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPGEQRTSPLALGMPRLHEKPIT*SMGIPG
Trigger: GCCAGGAATGCCCATGGATCATGTGATTGGCTTTTC...ATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGCAGCCAGGAAAGGAATaGCATGAGGGAAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQQPGKE*HEGSAW
Trigger: CCAAGCGCTTCCCTCATGGCATTCCTTTCCTGGCTG...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCAGTTACGCCAGAGGTTaGAGATGTCCGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLSYARG*RCPPAD
Trigger: GTCTGCTGGCGGACATCTGCAACCTCTGGCGTAACT...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TCAACAGCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGAGAACCTCCCCACTTaGCCTGGGCATGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: STARSEARVLMGMELRRLENLPT*PGHAKA
Trigger: AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC...CAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGCTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRGPDQI*SACISC
Trigger: ACAGCTGATACACGCAGACCAGATCTGGTCAGGTCC...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTCGAACCAATTCAGGATaGAGAGCACGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: ARSEARVLMGMELRRLASRTNSG*RARSTR
Trigger: CCTGGTGGAGCGTGCTCTCCATCCTGAATTGGTTCG...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTTGTTCTGGGCGGAGATaGTACGCAGGTCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: ARSEARVLMGMELRRLASCSGRR*YAGLWT
Trigger: TGTCCACAGACCTGCGTACCATCTCCGCCCAGAACA...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGAGAATGTCCATGTTCTaGGCGGAGATGGTACGCAGG +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRRMSMF*AEMVRR
Trigger: CCTGCGTACCATCTCCGCCCAGAACATGGACATTCT...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGAGAATGTCCATGTTCTaGGCGGAGATGGTACGCAGG +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQRMSMF*AEMVRR
Trigger: CCTGCGTACCATCTCCGCCCAGAACATGGACATTCT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACGTCACCGAGCAGGCCTaGGGAGCAGAGAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: TPRWYQAARPSMGRKANHVTEQA*GAENLP
Trigger: GGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTGCTCAGCAACGTCTGTaGGGCTGCGCACATGGAAGT +
Preference number: 4 (lower is better)
Translates to: HFGYDGVSHRAGLGSREPAQQRL*GCAHGS
Trigger: ACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGC...AGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCTGCAAGGCCCTCTATaGGTAGAAAAGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: EQAWGAENLPTCPGHAKALQGPL*VEKPIT
Trigger: TGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAG...AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTCCACATCACTACCCCTaGAGGGTTGATGATCACTGT +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSPHHYP*RVDDHC
Trigger: ACAGTGATCATCAACCCTTCAGGGGTAGTGATGTGG...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGCAGAGGCTAGAGTCCTaGTGGGCATGGAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMQRLES*WAWSSG
Trigger: TCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTG...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAAGGACCTCAGAACCCTaGGGAGTATGGGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQERTSEP*GVWEIH
Trigger: GTGGATCTCCCATACTCCTCAGGGTTCTGAGGTCCT...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp CGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCAGGCCACAGGAAAATTaGCCCAAAAGAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RAGLGSREPPHLPWACQGRPQEN*PKRSFQ
Trigger: TTGGAAACTTCTTTTGGGGCAATTTTCCTGTGGCCT...GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAGGGCAGAGCACAAGCTaGAGGACCTGGGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRGQSTS*RTWEHC
Trigger: GCAATGCTCCCAGGTCCTGCAGCTTGTGCTCTGCCC...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CACAAGCTGCAGGACCTGGGAGCATTGCTACTTGGCCTCATTGTGTTGTCACCAGCCGCCTTCATAGGCTaGCCAGCTGCAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HKLQDLGALLLGLIVLSPAAFIG*PAAGEG
Trigger: GCCTTCTCCTGCAGCTGGCCAGCCTATGAAGGCGGC...TGGTGACAACACAATGAGGCCAAGTAGCAATGCTCCCAGGTCCTGCAGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CAA 72 bp CTGAGGAGTATGGGAGATCCACCCAGAAAATACTCCTaGGGCAGCACAGTGCAAGGCCTGGGGCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: LRSMGDPPRKYS*GSTVQGLGHWV
Trigger: CACCCAGTGCCCCAGGCCTTGCACTGTGCTGCCCAAGGAGTATTTTCTGGGTGGATCTCCCATACTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGGTCAGCCATCTCCATaGAGAGCTGTTCACTTATGC +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQGQPSP*RAVHLC
Trigger: GCATAAGTGAACAGCTCTTCATGGAGATGGCTGACC...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAAGCAGCCATCCAGCTTaGGCATGTCTACCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RVAQQRLWGCAHGSRGQESSHPA*ACLPST
Trigger: AGTGGAAGGTAGACATGCTCAAGCTGGATGGCTGCT...TTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCGCATGTACACTTCGATaGGAGATTTTTCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: VTEQAWGAENLPTCPGHAACTLR*EIFPCE
Trigger: TTCACAAGGAAAAATCTCTCATCGAAGTGTACATGC...GGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTCCACATCACTACCCCTaGAGGGTTGATGATCACTGT +
Preference number: 4 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLAPHHYP*RVDDHC
Trigger: ACAGTGATCATCAACCCTTCAGGGGTAGTGATGTGG...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGGAAGGTGTTCCCACCTaGGACTATTCCATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQEGVPT*DYSILP
Trigger: AGGCAAAATGGAATAGTCTCAGGTGGGAACACCTTC...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGGGGCCGGCCACTGGCTaGAGTATGTCCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGGPATG*SMSWCS
Trigger: GGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCC...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CAAGGCCTGGGGCACTGGGTGCTCCTGCATTCAAAGCCCAAGGAGGACCTAGCTACCAGGGAAGACAAGTaGCCTGTAGCCTTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: QGLGHWVLLHSKPKEDLATREDK*PVALAK
Trigger: TTTAGCCAAGGCTACAGGGCACTTGTCTTCCCTGGT...AGCTAGGTCCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAAGAGAAAGGGTACCTTaGGTCCAAACAAGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPRERVP*VQTSLY
Trigger: ATACAGACTTGTTTGGACGCAAGGTACCCTTTCTCT...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CAATCTTCTGGTCACTTTGGAAAAGGAGGGGCCAGACGATGCCAGACATCATCCCCTCCCCACTTGCCCTaGGCATGCCAAGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: QSSGHFGKGGARRCQTSSPPHLP*ACQGSM
Trigger: CATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGG...GGATGATGTCTGGCATCGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCTGCAAGGCCCTCTATaGGTAGAAAAGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQLQGPL*VEKPIT
Trigger: TGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAG...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGCACCCTCTGCAGTGCTaGGAGTCCCGAGGGCCTACG +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGHPLQC*ESRGPT
Trigger: CGTAGGCCCTCGGGACTCCCAGCACTGCAGAGGGTG...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCGGGAGCATTGCTACTTaGCCTCATTGTGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLGSIAT*PHCVVT
Trigger: GGTGACAACACAATGAGGCCAAGTAGCAATGCTCCC...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CAA 72 bp GGGAGAGCCACCAGGGAAGACAAGTGCCCTGTAGCCTaGGCTAAAAGAGGAGGGCTTGGGAAATACGGACCA +
Preference number: 4 (lower is better)
Translates to: GRATREDKCPVA*AKRGGLGKYGP
Trigger: TGGTCCGTATTTCCCAAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTTGTCTTCCCTGGTGGCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAACTGATGATGTCACCTaGGTAGACGTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRTDDVT*VDVLGL
Trigger: GAGGCCCAGGACGTCTACTCAGGTGACATCATCAGT...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGACATCTCCAGGTTCTTaGTGGGATACAGGTACCACA +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQTSPGS*WDTGTT
Trigger: TGTGGTACCTGTATCCCATCAAGAACCTGGAGATGT...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAGTAGCTATCTTGGGCTaGAAGGTAAGGGAATTAATT +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPVAILG*KVRELI
Trigger: AATTAATTCCCTTACCTTTCAGCCCAAGATAGCTAC...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAGTTACGCCAGAGGTTaGAGATGTCCGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRSYARG*RCPPAD
Trigger: GTCTGCTGGCGGACATCTGCAACCTCTGGCGTAACT...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTTGCAGTATGTCCTGGTaGTCCACGAACCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: HFGYDGVSHRAGLGSREPCSMSW*STNQFR
Trigger: CCTGAATTGGTTCGTGGAGCACCAGGACATACTGCA...AGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACTCCAGCATCAGCACCTaGGCCACATGTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TPRWYQAARPSMGRKANHSSIST*ATCPSK
Trigger: CTTGCTGGGACATGTGGCCCAGGTGCTGATGCTGGA...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCACTTATGCAGTTCTTTaGGTCCTCATCACAGTTAAT +
Preference number: 4 (lower is better)
Translates to: AGLGSREPPHLPWACQGSTYAVL*VLITVN
Trigger: ATTAACTGTGATGAGGACCCAAAGAACTGCATAAGT...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAGCATCAGGCGGCCACTaGCATCGCGACCACCGATCC +
Preference number: 4 (lower is better)
Translates to: HDPWAFLARGQISLLLIRASGGH*HRDHRS
Trigger: GGATCGGTGGTCGCGATGCCAGTGGCCGCCTGATGC...TCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AAAGCAAGACAGGCAAGAACCCATCATTCCTTCACTTTGACTGTTACCCCTGTCGGGCAGCAGCCATCTTaGGGTACCCCTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KARQARTHHSFTLTVTPVGQQPS*GTPGPA
Trigger: AGCGGGCCCAGGGGTACCCCAAGATGGCTGCTGCCC...GACAGGGGTAACAGTCAAAGTGAAGGAATGATGGGTTCTTGCCTGTCTTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp TCTCAACAGCCTCAAGACATCAACTGGGGAAAGGAACTTTCTCTGGTGACCCTACGATGGGGCGGCCTGTaGCATTCAGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SQQPQDINWGKELSLVTLRWGGL*HSGQQP
Trigger: TGGCTGCTGCCCTGAATGCCACAGGCCGCCCCATCG...TAGGGTCACCAGAGAAAGTTCCTTTCCCCAGTTGATGTCTTGAGGCTGTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp TCAACAGCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGGCTGCAGTATGTCCTaGTGCTCCACGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: STARSEARVLMGMELRRLGCSMS*CSTNQF
Trigger: GAATTGGTTCGTGGAGCACCAGGACATACTGCAGCC...CAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGCTGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TCTCAACAGCCTCAAGACATCAACTGGGGAAAGGAACTTTCTCTGGTGACCCTAGTCACCGAGCAGGCCTaGGGAGCAGAGAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: SQQPQDINWGKELSLVTLVTEQA*GAENLP
Trigger: GGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC...TAGGGTCACCAGAGAAAGTTCCTTTCCCCAGTTGATGTCTTGAGGCTGTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCCAATCACATGATCCATaGGCATTCCTGGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLQSHDP*AFLARG
Trigger: ACCTCTTGCCAGGAATGCCCATGGATCATGTGATTG...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGTATGTGTTGGGCTCTaGAAGCGAAGCGTTCAGACC +
Preference number: 4 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMVCVGL*KRSVQT
Trigger: GGTCTGAACGCTTCGCTTCCAGAGCCCAACACATAC...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402937.1
CDS-3UTR CCA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGCCAGAAAATACTCCTTaGGCAGCACAGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMPENTP*AAQCKA
Trigger: GGCCTTGCACTGTGCTGCCCAAGGAGTATTTTCTGG...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
3UTR CAA 72 bp CAGAGCACAAGCTGCAGGACCTGGGAGCATTGCTACTaGGCCTCATTGTGTTGTCACCATCACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: QSTSCRTWEHCY*ASLCCHHHHCQ
Trigger: CTGGCAGTGGTGATGGTGACAACACAATGAGGCCAAGTAGCAATGCTCCCAGGTCCTGCAGCTTGTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGCAGCTTCCGAGGACCTaGCCAGATCTGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGQLPRT*PDLVCV
Trigger: CACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTG...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTAGAGATTTTTCCTTGTaGATCCTGCGTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HFGYDGVSHRAGLGSREPRDFSL*ILRPWM
Trigger: CATCCAGGGACGCAGGATTCACAAGGAAAAATCTCT...AGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp AGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGCATGTACACTTCGATaGGAGATTTTTCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RPGEQRTSPLALGMPRLHACTLR*EIFPCE
Trigger: TTCACAAGGAAAAATCTCTCATCGAAGTGTACATGC...ATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGAAAAGCCAATCACATaGTCCATGGGCATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMEKPIT*SMGIPG
Trigger: GCCAGGAATGCCCATGGATCATGTGATTGGCTTTTC...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGCCCATGGGTGGTGTCTaGAGGAGCCCATTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGPMGGV*RSPLSS
Trigger: GCTGGACAATGGGCTCCTGCAGACACCACCCATGGG...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGATCATGAGTGGATTCTaGAGAATGTCCATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRIMSGF*RMSMFW
Trigger: CCAGAACATGGACATTCTGCAGAATCCACTCATGAT...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTATCATGAGTGGATTCTaGAGAATGTCCATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSIMSGF*RMSMFW
Trigger: CCAGAACATGGACATTCTGCAGAATCCACTCATGAT...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGTTTCCTTGTGAATCCTaGGTCCCTGGATGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMFPCES*VPGCLR
Trigger: CCTTAGGCATCCAGGGACGCAGGATTCACAAGGAAA...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp AAGTGCCCTGTAGCCTTGGCTAAAAGAGGAGGGCTTGGGAAATACGGACCAAAGGTCCCAGCTCCTCACTaGTGGGACATCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KCPVALAKRGGLGKYGPKVPAPH*WDISRF
Trigger: GAACCTGGAGATGTCCCAGCAGTGAGGAGCTGGGAC...CTTTGGTCCGTATTTCCCAAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCCACAGGAAAATTaGCCCAAAAGAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSRPQEN*PKRSFQ
Trigger: TTGGAAACTTCTTTTGGGGCAATTTTCCTGTGGCCT...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TTTGTGGACACATCTGGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAAGGAGGCTGGCGAGTTaGTCAGCAACGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FVDTSGEYEPPLQPGWERRRLAS*SATSVG
Trigger: CCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCT...TCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp AGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGAGACTATTCCATTTTaGCTGAACAGCACTATGAAC +
Preference number: 4 (lower is better)
Translates to: RPGEQRTSPLALGMPRLHETIPF*LNSTMN
Trigger: GTTCATAGTGCTGTTCAGGCAAAATGGAATAGTCTC...ATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAAAGGCCAGCCAGCCCATaGGTGGTGTCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: DPWAFLARGQISLLLIRKRPASP*VVSAGA
Trigger: GGCTCCTGCAGACACCACCCATGGGCTGGCTGGCCT...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAACTTATGCAGTTCTTTaGGTCCTCATCACAGTTAAT +
Preference number: 4 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPTYAVL*VLITVN
Trigger: ATTAACTGTGATGAGGACCCAAAGAACTGCATAAGT...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CACAAGCTGCAGGACCTGGGAGCATTGCTACTTGGCCTCATTGTGTTGTCACCATGTTCTGGGCGGAGATaGTACGCAGGTCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: HKLQDLGALLLGLIVLSPCSGRR*YAGLWT
Trigger: TGTCCACAGACCTGCGTACCATCTCCGCCCAGAACA...TGGTGACAACACAATGAGGCCAAGTAGCAATGCTCCCAGGTCCTGCAGCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGAAAAAGGCAGCCACTaGCTTAAGGTCACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ENLPTCPGHAKAPWSRLSEKGSH*LKVTKK
Trigger: TTTCTTGGTGACCTTAAGCCAGTGGCTGCCTTTTTC...ACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCTGGATGCTGGGTACATaGAGGTTCACTCTACCATTT +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLWMLGT*RFTLPF
Trigger: AAATGGTAGAGTGAACCTCCATGTACCCAGCATCCA...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TCAACAGCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGAGAGATTTTTCCTTGTaGATCCTGCGTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: STARSEARVLMGMELRRLRDFSL*ILRPWM
Trigger: CATCCAGGGACGCAGGATTCACAAGGAAAAATCTCT...CAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGCTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACGGTTTATTGGTGACCTaGGGGAGCCAAGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TPRWYQAARPSMGRKANHGLLVT*GSQGLL
Trigger: AAGGAGACCTTGGCTCCCTCAGGTCACCAATAAACC...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACCACATCTGGGGAATATaGACCTCCTTTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TPRWYQAARPSMGRKANHHIWGI*TSFAAR
Trigger: CCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTG...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGGTCCCAGCTCCTCACTaGTGGGACATCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGVPAPH*WDISRF
Trigger: GAACCTGGAGATGTCCCAGCAGTGAGGAGCTGGGAC...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp GAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTAGGCCACAGGAAAATTaGCCCAAAAGAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ENLPTCPGHAKAPWSRLSRPQEN*PKRSFQ
Trigger: TTGGAAACTTCTTTTGGGGCAATTTTCCTGTGGCCT...ACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AAAGCCAATCACATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACCAGCCAGCCCATGGGTaGTGTCTGCAGGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: KANHMIHGHSWQEVRSLYQPAHG*CLQEPI
Trigger: AATGGGCTCCTGCAGACACCACCCATGGGCTGGCTG...GTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAGGCTAGAGTCCTGCATGAGGGAAGCGCTTaGGATCCGGCATCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: NFQILISESTARSEARVLHEGSA*DPASGG
Trigger: GCCGCCTGATGCCGGATCCCAAGCGCTTCCCTCATG...CAGGACTCTAGCCTCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGGAAGGCCACAGGATGCCTAAGGGATCCTaGTTGATTTTGATCATGAGT +
Preference number: 4 (lower is better)
Translates to: QQRLWGCAHGSRGQEGHRMPKGS*LILIMS
Trigger: ACTCATGATCAAAATCAACCAGGATCCCTTAGGCAT...CCTGTGGCCTTCCTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTGGAAGTACAATCTTCTaGTCACTTTGGAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARSEARVLMGMELRRLASGSTIF*SLWKRR
Trigger: CCTCCTTTTCCAAAGTGACCAGAAGATTGTACTTCC...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTGGTAAGGGAATTAATTaGTCAAGTCCAGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: ARSEARVLMGMELRRLASGKGIN*SSPGST
Trigger: AGTTGAGCCTGGACTTGACCAATTAATTCCCTTACC...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGATATCACAGACCCGGTaGAGTTCAGCTGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGISQTR*SSAGQG
Trigger: CCCTTGGCCAGCTGAACTTCACCGGGTCTGTGATAT...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGAAAACTTCCAAATCCTaGTTTCAGAGTCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQKTSKS*FQSQQQ
Trigger: TTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACGAAAAGCCAATCACATaGTCCATGGGCATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPRWYQAARPSMGRKANHEKPIT*SMGIPG
Trigger: GCCAGGAATGCCCATGGATCATGTGATTGGCTTTTC...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAGGCAGCTCCTGGGTGTaGGGCAAGTCTGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: WAFLARGQISLLLIRKLPGSSWV*GKSGIS
Trigger: AGAGATGCCAGACTTGCCTCACACCCAGGAGCTGCC...TGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATCCCAGGGCCGGCCACTaGCTGCAGTATGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDPRAGH*LQYVLV
Trigger: CACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGG...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AAAGCAAGACAGGCAAGAACCCATCATTCCTTCACTTTGACTGTTACCCCTGTCGTCCACAGGGCCATCTaGGCCCGGGATTGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KARQARTHHSFTLTVTPVVHRAI*ARDCSK
Trigger: CTTAGAGCAATCCCGGGCCCAGATGGCCCTGTGGAC...GACAGGGGTAACAGTCAAAGTGAAGGAATGATGGGTTCTTGCCTGTCTTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp TCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTGTCCACAGGGCCATCTaGGCCCGGGATTGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SMGIPGKRSDLSTPNSKTVHRAI*ARDCSK
Trigger: CTTAGAGCAATCCCGGGCCCAGATGGCCCTGTGGAC...AGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCATGCCTAAGGGATCCTaGTTGATTTTGATCATGAGT +
Preference number: 4 (lower is better)
Translates to: APWSRLSGATTACHMSQLMPKGS*LILIMS
Trigger: ACTCATGATCAAAATCAACCAGGATCCCTTAGGCAT...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AAAGCCAATCACATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACCAAGGCCTGGGGCACTaGGTGCTCCTGCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: KANHMIHGHSWQEVRSLYQGLGH*VLLHSK
Trigger: CTTTGAATGCAGGAGCACCCAGTGCCCCAGGCCTTG...GTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp TGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAACGGAGGGGCAGGCCTaGGATGAGGTAGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: WAFLARGQISLLLIRKLPTEGQA*DEVGFC
Trigger: ACAGAAGCCTACCTCATCCCAGGCCTGCCCCTCCGT...TGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp AAAGCCAATCACATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACATATCACAGACCCGGTaGAGTTCAGCTGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: KANHMIHGHSWQEVRSLYISQTR*SSAGQG
Trigger: CCCTTGGCCAGCTGAACTTCACCGGGTCTGTGATAT...GTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACAGAGGCTAGAGTCCTaGTGGGCATGGAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: DPWAFLARGQISLLLIRKQRLES*WAWSSG
Trigger: TCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTG...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TGGCGAGTTGCTCAGCAACGTCTGTGGGGCTGCGCACATGGAAGTAGAGGCCAGATTCCTAACTGGCCTTaGATAGAAGGGAATAAATGT +
Preference number: 4 (lower is better)
Translates to: WRVAQQRLWGCAHGSRGQIPNWP*IEGNKC
Trigger: ACATTTATTCCCTTCTATTCAAGGCCAGTTAGGAAT...CTGGCCTCTACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGCAACTCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp TCTCAACAGCCTCAAGACATCAACTGGGGAAAGGAACTTTCTCTGGTGACCCTACAGCCAGGAAAGGAATaGCATGAGGGAAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQQPQDINWGKELSLVTLQPGKE*HEGSAW
Trigger: CCAAGCGCTTCCCTCATGGCATTCCTTTCCTGGCTG...TAGGGTCACCAGAGAAAGTTCCTTTCCCCAGTTGATGTCTTGAGGCTGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCTCAGGGTCATTCCAGTaGCCAGGGCCGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVSGSFQ*PGPATG
Trigger: GCCAGTGGCCGGCCCTGGGCACTGGAATGACCCTGA...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CAATCTTCTGGTCACTTTGGAAAAGGAGGGGCCAGACGATGCCAGACATCATCCTTTCCTTGTGAATCCTaGGTCCCTGGATGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: QSSGHFGKGGARRCQTSSFPCES*VPGCLR
Trigger: CCTTAGGCATCCAGGGACGCAGGATTCACAAGGAAA...GGATGATGTCTGGCATCGTCTGGCCCCTCCTTTTCCAAAGTGACCAGAAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAAGTCCCAGCTCCTCACTaGTGGGACATCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DPWAFLARGQISLLLIRKVPAPH*WDISRF
Trigger: GAACCTGGAGATGTCCCAGCAGTGAGGAGCTGGGAC...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTCACACCCTCTGCAGTaGTGGGAGTCCCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDSHPLQ*WESRGP
Trigger: AGGCCCTCGGGACTCCCAGCACTGCAGAGGGTGTGA...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp AAGTGCCCTGTAGCCTTGGCTAAAAGAGGAGGGCTTGGGAAATACGGACCAAAGAGGACCTGGGAGCATTaGTACTTGGCCTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: KCPVALAKRGGLGKYGPKRTWEH*YLASLC
Trigger: ACACAATGAGGCCAAGTAGCAATGCTCCCAGGTCCT...CTTTGGTCCGTATTTCCCAAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAAGGCACTGGGTGCTCCTaGATTCAAAGCCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPWAFLARGQISLLLIRKGTGCS*IQSPRR
Trigger: CCTCCTTGGGCTTTGAATGCAGGAGCACCCAGTGCC...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp TCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAGCATCAGCACCTaGGCCACATGTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SMGIPGKRSDLSTPNSKTSSIST*ATCPSK
Trigger: CTTGCTGGGACATGTGGCCCAGGTGCTGATGCTGGA...AGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp ATTTTAAGACACAACTCCTGGACAGGTTTGTGGACACATCTGGGGAATATGAACCATGAGGGAAGCGCTTaGGATCCGGCATCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: ILRHNSWTGLWTHLGNMNHEGSA*DPASGG
Trigger: GCCGCCTGATGCCGGATCCCAAGCGCTTCCCTCATG...GTTCATATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCGGGCAGCAGCCATCTTaGGGTACCCCTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSGQQPS*GTPGPA
Trigger: AGCGGGCCCAGGGGTACCCCAAGATGGCTGCTGCCC...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AAAGCCAATCACATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACACTGTAGTTCACCCTTaGGGGGAGGCCGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: KANHMIHGHSWQEVRSLYTVVHP*GEAAFI
Trigger: TATGAAGGCGGCCTCCCCCCAAGGGTGAACTACAGT...GTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGAGAATGTCCATGTTCTaGGCGGAGATGGTACGCAGG +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGRMSMF*AEMVRR
Trigger: CCTGCGTACCATCTCCGCCCAGAACATGGACATTCT...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATCCTCCCCACTTGCCCTaGGCATGCCAAGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDPPHLP*ACQGSM
Trigger: CATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGG...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp AAGTGCCCTGTAGCCTTGGCTAAAAGAGGAGGGCTTGGGAAATACGGACCAAAGAAGAGGGTTTACGCTTaGACAGGGCATAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: KCPVALAKRGGLGKYGPKKRVYA*TGHRTW
Trigger: CCAGGTTCTATGCCCTGTCCAAGCGTAAACCCTCTT...CTTTGGTCCGTATTTCCCAAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACAGCAGTCATCAATGTTaGGGTATGTGTAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: TPRWYQAARPSMGRKANHSSHQC*GMCSPC
Trigger: ACATGGGCTACACATACCTCAACATTGATGACTGCT...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGTGCAGTATGTCCTGGTaGTCCACGAACCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGCSMSW*STNQFR
Trigger: CCTGAATTGGTTCGTGGAGCACCAGGACATACTGCA...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATAGGAGGCTGGCGAGTTaGTCAGCAACGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDRRLAS*SATSVG
Trigger: CCCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCT...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp ACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTCCAGGCCCACCTTGTCCAGTGTaGTGCCTGGGTAACCCATGC +
Preference number: 4 (lower is better)
Translates to: TCSYLGLKGKGINWSSPGPPCPV*CLGNPC
Trigger: GCATGGGTTACCCAGGCACCACACTGGACAAGGTGG...GCCTGGACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAGCCGCCTTCATAGGCTaGCCAGCTGCAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRAAFIG*PAAGEG
Trigger: GCCTTCTCCTGCAGCTGGCCAGCCTATGAAGGCGGC...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACCAGCTCCTCACTGCTaGGACATCTCCAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: DPWAFLARGQISLLLIRKPAPHC*DISRFL
Trigger: CAAGAACCTGGAGATGTCCCAGCAGTGAGGAGCTGG...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCGTCACCGAGCAGGCCTaGGGAGCAGAGAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSVTEQA*GAENLP
Trigger: GGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGCGAAACAACGTGTCTTaGATGTCAGACCTCACACCC +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGRNNVS*MSDLTP
Trigger: GGGTGTGAGGTCTGACATCCAAGACACGTTGTTTCG...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGACAGCTTCCGAGGACCTaGCCAGATCTGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRQLPRT*PDLVCV
Trigger: CACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTG...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TTTGTGGACACATCTGGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAACATCTCCAGGTTCTTaGTGGGATACAGGTACCACA +
Preference number: 4 (lower is better)
Translates to: FVDTSGEYEPPLQPGWERTSPGS*WDTGTT
Trigger: TGTGGTACCTGTATCCCATCAAGAACCTGGAGATGT...TCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGACATCTCCAGGTTCTTaGTGGGATACAGGTACCACA +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGTSPGS*WDTGTT
Trigger: TGTGGTACCTGTATCCCATCAAGAACCTGGAGATGT...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TCAACAGCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGAAAACTTCCAAATCCTaGTTTCAGAGTCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: STARSEARVLMGMELRRLKTSKS*FQSQQQ
Trigger: TTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTT...CAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGCTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp ATTTTAAGACACAACTCCTGGACAGGTTTGTGGACACATCTGGGGAATATGAACCCTTGTCCAGTGTGGTaGCTGGGTAACCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: ILRHNSWTGLWTHLGNMNPCPVW*LGNPCR
Trigger: CCTGCATGGGTTACCCAGGCACCACACTGGACAAGG...GTTCATATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp GGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAAATAAAGGAAAAGAAGGAGGGGCCAGACGATaGCAGACATCATCCATAGAG +
Preference number: 4 (lower is better)
Translates to: GEYEPPLQPGWERNKGKEGGARR*QTSSIE
Trigger: CTCTATGGATGATGTCTGGCATCGTCTGGCCCCTCC...TTCTTTTCCTTTATTTCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp GTAAAGACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTAAGAGCAGGCTGAGGTaGTGGGCCAGGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: VKTCSYLGLKGKGINWSSKSRLR*WARGTA
Trigger: AGCAGTGCCCCTGGCCCAGCACCTCAGCCTGCTCTT...ACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGTCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAAGGCTGCAGTATGTCCTaGTGCTCCACGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: DPWAFLARGQISLLLIRKGCSMS*CSTNQF
Trigger: GAATTGGTTCGTGGAGCACCAGGACATACTGCAGCC...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATCATGCCAAGGCTCCATaGTCTAGGCTCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDHAKAP*SRLSGA
Trigger: GGCACCACTGAGCCTAGACCATGGAGCCTTGGCATG...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGCAATCACATGATCCATaGGCATTCCTGGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGQSHDP*AFLARG
Trigger: ACCTCTTGCCAGGAATGCCCATGGATCATGTGATTG...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGCTGCAAGGCCCTCTATaGGTAGAAAAGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGLQGPL*VEKPIT
Trigger: TGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAG...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp TCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTGATGGTTACTGGAGCTaGATGCTGGGTACATGGAGG +
Preference number: 4 (lower is better)
Translates to: SMGIPGKRSDLSTPNSKTDGYWS*MLGTWR
Trigger: CCTCCATGTACCCAGCATCCAGCTCCAGTAACCATC...AGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp AAAGCAAGACAGGCAAGAACCCATCATTCCTTCACTTTGACTGTTACCCCTGTCAAGCTAAGAAACGTCTaGAAAGCACTGGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: KARQARTHHSFTLTVTPVKLRNV*KALGSR
Trigger: CCGTGACCCCAGTGCTTTTCAGACGTTTCTTAGCTT...GACAGGGGTAACAGTCAAAGTGAAGGAATGATGGGTTCTTGCCTGTCTTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp GGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAAATAAAGGAAAAGAAGAACAGGTTTATTGGTaGCCTGAGGGAGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GEYEPPLQPGWERNKGKEEQVYW*PEGAKV
Trigger: GACCTTGGCTCCCTCAGGTCACCAATAAACCTGTTC...TTCTTTTCCTTTATTTCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCCCCATGGGTGGTGTCTaGAGGAGCCCATTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSPMGGV*RSPLSS
Trigger: GCTGGACAATGGGCTCCTGCAGACACCACCCATGGG...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATAGTTACGCCAGAGGTTaGAGATGTCCGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDSYARG*RCPPAD
Trigger: GTCTGCTGGCGGACATCTGCAACCTCTGGCGTAACT...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCATTTCCTTGTGAATCCTaGGTCCCTGGATGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: WAFLARGQISLLLIRKLPFPCES*VPGCLR
Trigger: CCTTAGGCATCCAGGGACGCAGGATTCACAAGGAAA...TGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGAATATGAACCTCCTTTaGAGCCAGGTTGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGNMNLL*SQVGRE
Trigger: TTCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATT...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCCCACCTTGTCCAGTGTaGTGCCTGGGTAACCCATGC +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVPPCPV*CLGNPC
Trigger: GCATGGGTTACCCAGGCACCACACTGGACAAGGTGG...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCACGTCTGAAAAGCACTaGGGTCACGGCTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVTSEKH*GHGCLA
Trigger: AGCCAGGCAGCCGTGACCCCAGTGCTTTTCAGACGT...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATAGCAGCCATCCAGCTTaGGCATGTCTACCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDSSHPA*ACLPST
Trigger: AGTGGAAGGTAGACATGCTCAAGCTGGATGGCTGCT...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp AAGTGCCCTGTAGCCTTGGCTAAAAGAGGAGGGCTTGGGAAATACGGACCAAAGGCATGTACACTTCGATaGGAGATTTTTCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: KCPVALAKRGGLGKYGPKACTLR*EIFPCE
Trigger: TTCACAAGGAAAAATCTCTCATCGAAGTGTACATGC...CTTTGGTCCGTATTTCCCAAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGATCATTCCTTCACTTTaGCTGTTACCCCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGIIPSL*LLPLSL
Trigger: TAAGGACAGGGGTAACAGTCAAAGTGAAGGAATGAT...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCTGTTCTGGGCGGAGATaGTACGCAGGTCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVCSGRR*YAGLWT
Trigger: TGTCCACAGACCTGCGTACCATCTCCGCCCAGAACA...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp GTAAAGACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTCATGCCAAGGCTCCATaGTCTAGGCTCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: VKTCSYLGLKGKGINWSSHAKAP*SRLSGA
Trigger: GGCACCACTGAGCCTAGACCATGGAGCCTTGGCATG...ACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGTCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCGCTCAGCAACGTCTGTaGGGCTGCGCACATGGAAGT +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSAQQRL*GCAHGS
Trigger: ACTTCCATGTGCGCAGCCCCACAGACGTTGCTGAGC...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCACAAGCTGCAGGACCTaGGAGCATTGCTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVTSCRT*EHCYLA
Trigger: GGCCAAGTAGCAATGCTCCCAGGTCCTGCAGCTTGT...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp GGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAAATAAAGGAAAAGAACACGTTGATGGTTACTaGAGCTGGATGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: GEYEPPLQPGWERNKGKEHVDGY*SWMLGT
Trigger: TGTACCCAGCATCCAGCTCCAGTAACCATCAACGTG...TTCTTTTCCTTTATTTCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR TCA 90 bp TCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTAGCAGTCATCAATGTTaGGGTATGTGTAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: SMGIPGKRSDLSTPNSKTSSHQC*GMCSPC
Trigger: ACATGGGCTACACATACCTCAACATTGATGACTGCT...AGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp AAAGCCAATCACATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACAATAATGGTACACGTTaGTGGTTACTGGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KANHMIHGHSWQEVRSLYNNGTR*WLLELD
Trigger: ATCCAGCTCCAGTAACCATCAACGTGTACCATTATT...GTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTGCAGTATGTCCTGGTaGTCCACGAACCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: LARGQISLLLIRKLPNPDCSMSW*STNQFR
Trigger: CCTGAATTGGTTCGTGGAGCACCAGGACATACTGCA...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVGPDQI*SACISC
Trigger: ACAGCTGATACACGCAGACCAGATCTGGTCAGGTCC...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCCGAACCAATTCAGGATaGAGAGCACGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSRTNSG*RARSTR
Trigger: CCTGGTGGAGCGTGCTCTCCATCCTGAATTGGTTCG...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAGGCTGCAGTATGTCCTaGTGCTCCACGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRGCSMS*CSTNQF
Trigger: GAATTGGTTCGTGGAGCACCAGGACATACTGCAGCC...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAGGTCAGCCATCTCCATaGAGAGCTGTTCACTTATGC +
Preference number: 4 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRGQPSP*RAVHLC
Trigger: GCATAAGTGAACAGCTCTTCATGGAGATGGCTGACC...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp TATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACATGATCCATGGGAAAACTTCCAAATCCTaGTTTCAGAGTCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: YQAARPSMGRKANHMIHGKTSKS*FQSQQQ
Trigger: TTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTT...CCCATGGATCATGTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR GCA 90 bp TGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAATCATGAGTGGATTCTaGAGAATGTCCATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WAFLARGQISLLLIRKLPIMSGF*RMSMFW
Trigger: CCAGAACATGGACATTCTGCAGAATCCACTCATGAT...TGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAATGCCTAAGGGATCCTaGTTGATTTTGATCATGAGT +
Preference number: 4 (lower is better)
Translates to: HDPWAFLARGQISLLLIRMPKGS*LILIMS
Trigger: ACTCATGATCAAAATCAACCAGGATCCCTTAGGCAT...TCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAAGAGGGTTTACGCTTaGACAGGGCATAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVKRVYA*TGHRTW
Trigger: CCAGGTTCTATGCCCTGTCCAAGCGTAAACCCTCTT...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCATCAGCTGTATGTGTTaGGCTCTGGAAGCGAAGCGT +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVISCMC*ALEAKR
Trigger: ACGCTTCGCTTCCAGAGCCCAACACATACAGCTGAT...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402937.1
3UTR CAA 72 bp AGGTTTGTGGACACATCTGGGGAATATGAACCTCCTTaGCAGCCAGGTTGGGAGAGAAATAAAGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: RFVDTSGEYEPP*QPGWERNKGKE
Trigger: TTCTTTTCCTTTATTTCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCATCAGCTGTATGTGTTaGGCTCGAAGCGTTCAGACC +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSISCMC*ARSVQT
Trigger: GGTCTGAACGCTTCGAGCCCAACACATACAGCTGAT...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403363.5
3UTR CAA 72 bp AGGAAATCAATTTTAAGACACAACTCCTGGACAGGTTaGTGGACACATCTGGGGAATATGAACCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RKSILRHNSWTG*WTHLGNMNLLC
Trigger: GCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAAAATTGATTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp TGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAACTTATGCAGTTCTTTaGGTCCTCATCACAGTTAAT +
Preference number: 4 (lower is better)
Translates to: WAFLARGQISLLLIRKLPTYAVL*VLITVN
Trigger: ATTAACTGTGATGAGGACCCAAAGAACTGCATAAGT...TGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR TCA 90 bp GTAAAGACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTAGCAGTCATCAATGTTaGGGTATGTGTAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: VKTCSYLGLKGKGINWSSSSHQC*GMCSPC
Trigger: ACATGGGCTACACATACCTCAACATTGATGACTGCT...ACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGTCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CCA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCATCAGCTGTATGTGTTaGGCTCTGGAAGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVISCMC*ALEAKK
Trigger: TTTCTTAGCTTCCAGAGCCCAACACATACAGCTGAT...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp GTAAAGACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTAGAGCTGTTCACTTATaGAGTTCTTTGGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VKTCSYLGLKGKGINWSSRAVHL*SSLGPH
Trigger: ATGAGGACCCAAAGAACTGCATAAGTGAACAGCTCT...ACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGTCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR GCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAGAGCTGTTCACTTATaGAGTTCTTTGGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSRAVHL*SSLGPH
Trigger: ATGAGGACCCAAAGAACTGCATAAGTGAACAGCTCT...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CCA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCTTAAGACACAACTCCTaGACAGGTTTGTGGACACAT +
Preference number: 4 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSLRHNS*TGLWTH
Trigger: ATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAA...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp GTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAGGGCAGCAGCCATCTaGGGGTACCCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: VTEQAWGAENLPTCPGHARAAAI*GYPWAR
Trigger: GCGGGCCCAGGGGTACCCCAAGATGGCTGCTGCCCT...GGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGGTGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCCAGGAGGCTGGCGAGTaGCTCAGCAACGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RAGLGSREPPHLPWACQGQEAGE*LSNVCG
Trigger: CCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCTG...GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCAACTAAGGCGCTAGCCTaGTTGGACAGAGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: QAWGAENLPTCPGHAKAPTKALA*LDRGRM
Trigger: CATGCGGCCTCTGTCCAACAAGGCTAGCGCCTTAGT...TGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp GGGTCATTCCAGTGCCCAGGGCCGGCCACTGGCTGCAGTATGTCCTaGTGCTCCACGAACCAATTCAGGATGGAGAGCACGCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GSFQCPGPATGCSMS*CSTNQFRMESTLHQ
Trigger: CTGGTGGAGCGTGCTCTCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCACTGGAATGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCGCATCCTGGACCACCTaGTCCAGTGTGGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: APWSRLSGATTACHMSQLASWTT*SSVVPG
Trigger: CCCAGGCACCACACTGGACAAGGTGGTCCAGGATGC...GAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GCAAGGTCAGAGGCTAGAGTCCTGATGGGCATGGAGCTCAGGAGGCTGGCGAGTAGAGAACCTCCCCACTaGCCCTGGGCATGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: ARSEARVLMGMELRRLASREPPH*PWACQG
Trigger: GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCT...ACTCGCCAGCCTCCTGAGCTCCATGCCCATCAGGACTCTAGCCTCTGACCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 90 bp TCATTCCAGTGCCCAGGGCCGGCCACTGGCTGCAGTATGTCCTGGTaGTCCACGAACCAATTCAGGATGGAGAGCACGCTCCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: SFQCPGPATGCSMSW*STNQFRMESTLHQE
Trigger: CTCCTGGTGGAGCGTGCTCTCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCACTGGAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp AGTGAACGTAGTCAGCCAGGAAAGGAATGCCATGAGGGAAGCGCTTaGGATCCGGCATCAGGCGGCCACTGGCATCGCGACCACCGATCC +
Preference number: 5 (lower is better)
Translates to: SERSQPGKECHEGSA*DPASGGHWHRDHRS
Trigger: GGATCGGTGGTCGCGATGCCAGTGGCCGCCTGATGCCGGATCCCAAGCGCTTCCCTCATGGCATTCCTTTCCTGGCTGACTACGTTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGTATCAGCTGTATGTGTaGGGCTCGAAGCGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRYQLYV*GSKRSD
Trigger: GTCTGAACGCTTCGAGCCCAACACATACAGCTGATA...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403363.5
CDS-3UTR CAA 90 bp GAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGTCTGCAGGAGCCCATaGTCCAGCATCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: ENLPTCPGHAKAPWSRLSVCRSP*SSISTW
Trigger: CCAGGTGCTGATGCTGGACAATGGGCTCCTGCAGAC...ACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACAGGGCAGCAGCCATCTaGGGGTACCCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: TPRWYQAARPSMGRKANHRAAAI*GYPWAR
Trigger: GCGGGCCCAGGGGTACCCCAAGATGGCTGCTGCCCT...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGAAGGCGCTAGCCTTGTaGGACAGAGGCCGCATGTAC +
Preference number: 5 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQKALAL*DRGRMY
Trigger: GTACATGCGGCCTCTGTCCAACAAGGCTAGCGCCTT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp TGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAAGGCGCTAGCCTTGTaGGACAGAGGCCGCATGTAC +
Preference number: 5 (lower is better)
Translates to: WGAENLPTCPGHAKAPWSKALAL*DRGRMY
Trigger: GTACATGCGGCCTCTGTCCAACAAGGCTAGCGCCTT...AGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTCCGACATCTCCAGGTTCTaGATGGGATACAGGTACCAC +
Preference number: 5 (lower is better)
Translates to: AGLGSREPPHLPWACQGSDISRF*MGYRYH
Trigger: GTGGTACCTGTATCCCATCAAGAACCTGGAGATGTC...GGAGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 90 bp CCTGGACCACCTTGTCCAGTGTGGTGCCTGGGTAACCCATGCAGGTaGAGTTGCCCATGTCCGCGTAGATACCCAACTTCAGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PGPPCPVWCLGNPCR*SCPCPRRYPTSGPG
Trigger: CCCTGGGCCTGAAGTTGGGTATCTACGCGGACATGGGCAACTTCACCTGCATGGGTTACCCAGGCACCACACTGGACAAGGTGGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 90 bp AGCAGCATGTCAGGGTCATTCCAGTGCCCAGGGCCGGCCACTGGCTaGAGTATGTCCTGGTGCTCCACGAACCAATTCAGGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SSMSGSFQCPGPATG*SMSWCSTNQFRMES
Trigger: GCTCTCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCACTGGAATGACCCTGACATGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp CCCATGGGTGGTGTCTGCAGGAGCCCATTGTCCAGCATCAGCACCTaGGCCACATGTCCCAGCAAGAGCACTGTCTTCAGCAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: PMGGVCRSPLSSIST*ATCPSKSTVFSSIA
Trigger: AGCGATGCTGCTGAAGACAGTGCTCTTGCTGGGACATGTGGCCCAGGTGCTGATGCTGGACAATGGGCTCCTGCAGACACCACCCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCTTCATCACAGTTAATGTaGCAGCGGAAGCGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: EQAWGAENLPTCPGHAKASSQLM*QRKRSQ
Trigger: CTGGGAACGCTTCCGCTGCAACATTAACTGTGATGA...AGCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp GGCGAAGGTCTGAGCATCCTGGACCACCTTGTCCAGTGTGGTGCCTaGGTAACCCATGCAGGTGAAGTTGCCCATGTCCGCGTAGATACC +
Preference number: 5 (lower is better)
Translates to: GEGLSILDHLVQCGA*VTHAGEVAHVRVDT
Trigger: GGTATCTACGCGGACATGGGCAACTTCACCTGCATGGGTTACCCAGGCACCACACTGGACAAGGTGGTCCAGGATGCTCAGACCTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCCCTAAGGGATCCTGGTaGATTTTGATCATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: RAGLGSREPPHLPWACQGPKGSW*ILIMSG
Trigger: TCCACTCATGATCAAAATCAACCAGGATCCCTTAGG...GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAGAGAACCTCCCCACTaGCCCTGGGCATGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRREPPH*PWACQG
Trigger: GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCT...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGAACCTGGCCGTGAGATaGCACTTTGGGTATGATGGG +
Preference number: 5 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQNLAVR*HFGYDG
Trigger: CCCATCATACCCAAAGTGCAATCTCACGGCCAGGTT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACTATCAGCTGTATGTGTaGGGCTCTGGAAGCGAAGCG +
Preference number: 5 (lower is better)
Translates to: GHAKAPWSRLSGATTACHYQLYV*GSGSEA
Trigger: CGCTTCGCTTCCAGAGCCCAACACATACAGCTGATA...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402937.1
CDS-3UTR CAA 90 bp CCGAGCAGGCCTGGGGAGCAGAGAACCTCCCCACTTGCCCTGGGCATGCCAAGGCATCATTCCTTCACTTaGACTGTTACCCCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: PSRPGEQRTSPLALGMPRHHSFT*TVTPVL
Trigger: AAGGACAGGGGTAACAGTCAAAGTGAAGGAATGATG...CCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCTGCTCCCCAGGCCTGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGAAGTGCCCTGTAGCCTaGGCTAAAAGAGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQKCPVA*AKRGGL
Trigger: AAGCCCTCCTCTTTTAGCCAAGGCTACAGGGCACTT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS CCA 90 bp AATGAGCAGCATGTCAGGGTCATTCCAGTGCCCAGGGCCGGCCACTaGCTGCAGTATGTCCTGGTGCTCCACGAACCAATTCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: NEQHVRVIPVPRAGH*LQYVLVLHEPIQDG
Trigger: TCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCACTGGAATGACCCTGACATGCTGCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGACTAAGGCGCTAGCCTaGTTGGACAGAGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMTKALA*LDRGRM
Trigger: CATGCGGCCTCTGTCCAACAAGGCTAGCGCCTTAGT...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGGACATCTCCAGGTTCTaGATGGGATACAGGTACCAC +
Preference number: 5 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQDISRF*MGYRYH
Trigger: GTGGTACCTGTATCCCATCAAGAACCTGGAGATGTC...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACCAGGAGGCTGGCGAGTaGCTCAGCAACGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TPRWYQAARPSMGRKANHQEAGE*LSNVCG
Trigger: CCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCTG...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGTGGGAGCATTGCTACTaGGCCTCATTGTGTTGTCAC +
Preference number: 5 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQWEHCY*ASLCCH
Trigger: GTGACAACACAATGAGGCCAAGTAGCAATGCTCCCA...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACGAATATGAACCTCCTTaGCAGCCAGGTTGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GHAKAPWSRLSGATTACHEYEPP*QPGWER
Trigger: TCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTC...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGAACTCCTGGACAGGTTaGTGGACACATCTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: LALGMPRLHGLGSVVPPQNSWTG*WTHLGN
Trigger: ATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTT...CTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTCCCAGAAAATACTCCTaGGGCAGCACAGTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: HFGYDGVSHRAGLGSREPPRKYS*GSTVQG
Trigger: GCCTTGCACTGTGCTGCCCAAGGAGTATTTTCTGGG...AGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS TCA 90 bp GCACTGTCTTCAGCAGCATCGCTCTGGACTCAGCTTCCGAGGACCTaGCCAGATCTGGTCTGCGTGTATCAGCTGTATGTGTTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: ALSSAASLWTQLPRT*PDLVCVYQLYVLGS
Trigger: CGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCGATGCTGCTGAAGACAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403363.5
CDS TCA 90 bp TGTGTTGGGCTCTGGAAGCGAAGCGTTCAGACCTGCCGCCGCTTCTaGCTCGAATCCGGTAACCTGATAAGTCCGAAGCGTTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: CVGLWKRSVQTCRRF*LESGNLISPKRSSE
Trigger: CTCACTGGAACGCTTCGGACTTATCAGGTTACCGGATTCGAGTCAGAAGCGGCGGCAGGTCTGAACGCTTCGCTTCCAGAGCCCAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402937.1
CDS CCA 90 bp CAGCAGCATCGCTCTGGACTCAGCTTCCGAGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGTATGTGTTGGGCTCGAAGCGTTCAG +
Preference number: 5 (lower is better)
Translates to: QQHRSGLSFRGPDQI*SACISCMCWARSVQ
Trigger: CTGAACGCTTCGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCGATGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403363.5
CDS CCA 90 bp CAGCAGCATCGCTCTGGACTCAGCTTCCGAGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGTATGTGTTGGGCTCTGGAAGCGAAG +
Preference number: 5 (lower is better)
Translates to: QQHRSGLSFRGPDQI*SACISCMCWALEAK
Trigger: CTTCGCTTCCAGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCGATGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402937.1
CDS TCA 90 bp GCACTGTCTTCAGCAGCATCGCTCTGGACTCAGCTTCCGAGGACCTaGCCAGATCTGGTCTGCGTGTATCAGCTGTATGTGTTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: ALSSAASLWTQLPRT*PDLVCVYQLYVLGS
Trigger: AGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCGATGCTGCTGAAGACAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396398.8
ENST00000402937.1
CDS CCA 90 bp CAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCCTCACTGCTaGGACATCTCCAGGTTCTTGATGGGATACAGGTACCACATCACT +
Preference number: 5 (lower is better)
Translates to: QWCHHSLSHVPAPHC*DISRFLMGYRYHIT
Trigger: AGTGATGTGGTACCTGTATCCCATCAAGAACCTGGAGATGTCCCAGCAGTGAGGAGCTGGGACATGTGACAGGCTGTGGTGGCACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp CAGCAGCATCGCTCTGGACTCAGCTTCCGAGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGTATGTGTTGGGCTCTGGAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: QQHRSGLSFRGPDQI*SACISCMCWALEAK
Trigger: CTTAGCTTCCAGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCGATGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp GGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACGGATCCTGGTTGATTTaGATCATGAGTGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: GHAKAPWSRLSGATTACHGSWLI*IMSGFC
Trigger: GCAGAATCCACTCATGATCAAAATCAACCAGGATCC...GTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp CCACTGGCTGCAGTATGTCCTGGTGCTCCACGAACCAATTCAGGATaGAGAGCACGCTCCACCAGGAGTCCTGGATGTCATCATAGTTAC +
Preference number: 5 (lower is better)
Translates to: PLAAVCPGAPRTNSG*RARSTRSPGCHHSY
Trigger: GTAACTATGATGACATCCAGGACTCCTGGTGGAGCGTGCTCTCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp CCCGGAGCTTCAGTTCTTCCTTCAGAAATACGAAACAACGTGTCTTaGATGTCAGACCTCACACCCTCTGCAGTGCTGGGAGTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: PGASVLPSEIRNNVS*MSDLTPSAVLGVPR
Trigger: CCTCGGGACTCCCAGCACTGCAGAGGGTGTGAGGTCTGACATCCAAGACACGTTGTTTCGTATTTCTGAAGGAAGAACTGAAGCTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CACTTTGGGTATGATGGGGTCAGTCACCGAGCAGGCCTGGGGAGCAGAGAACCTATGATCACTGTGAAGTaGGTTTCATCTCGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: HFGYDGVSHRAGLGSREPMITVK*VSSRRP
Trigger: TGGCCTCCGAGATGAAACCAACTTCACAGTGATCAT...AGGTTCTCTGCTCCCCAGGCCTGCTCGGTGACTGACCCCATCATACCCAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAACCTGGCCGTGAGATaGCACTTTGGGTATGATGGG +
Preference number: 5 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRNLAVR*HFGYDG
Trigger: CCCATCATACCCAAAGTGCAATCTCACGGCCAGGTT...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 90 bp CGAGGACCTGACCAGATCTGGTCTGCGTGTATCAGCTGTATGTGTTaGGCTCTGGAAGCTAAGAAACGTCTGAAAAGCACTGGGGTCACG +
Preference number: 5 (lower is better)
Translates to: RGPDQIWSACISCMC*ALEAKKRLKSTGVT
Trigger: CGTGACCCCAGTGCTTTTCAGACGTTTCTTAGCTTCCAGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAAGGGCAGCAGCCATCTaGGGGTACCCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRRAAAI*GYPWAR
Trigger: GCGGGCCCAGGGGTACCCCAAGATGGCTGCTGCCCT...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GTCTCCTTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGACTACCCCTGAAGGGTaGATGATCACTGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VSFVTLTPRWYQAARPSMTTPEG*MITVKL
Trigger: CAACTTCACAGTGATCATCAACCCTTCAGGGGTAGT...CATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAAGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp ACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAAAAGCCAATCACAACCTGGCCGTGAGATaGCACTTTGGGTATGATGGG +
Preference number: 5 (lower is better)
Translates to: TPRWYQAARPSMGRKANHNLAVR*HFGYDG
Trigger: CCCATCATACCCAAAGTGCAATCTCACGGCCAGGTT...GTGATTGGCTTTTCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACAGGAGGCTGGCGAGTaGCTCAGCAACGTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: DPWAFLARGQISLLLIRKQEAGE*LSNVCG
Trigger: CCCACAGACGTTGCTGAGCAACTCGCCAGCCTCCTG...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGATGCTACTTGGCCTCATaGTGTTGTCACCATCACCAC +
Preference number: 5 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRCYLAS*CCHHHH
Trigger: GTGGTGATGGTGACAACACAATGAGGCCAAGTAGCA...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp TCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTGTCTGCAGGAGCCCATaGTCCAGCATCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: SMGIPGKRSDLSTPNSKTVCRSP*SSISTW
Trigger: CCAGGTGCTGATGCTGGACAATGGGCTCCTGCAGAC...AGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp AAAGCCAATCACATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACACTAAGGCGCTAGCCTaGTTGGACAGAGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: KANHMIHGHSWQEVRSLYTKALA*LDRGRM
Trigger: CATGCGGCCTCTGTCCAACAAGGCTAGCGCCTTAGT...GTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATGTGATTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp TTTGTGACCCTCACTCCCAGGTGGTATCAGGCTGCAAGGCCCTCTATGGGTAGAGGATCCTGGTTGATTTaGATCATGAGTGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: FVTLTPRWYQAARPSMGRGSWLI*IMSGFC
Trigger: GCAGAATCCACTCATGATCAAAATCAACCAGGATCC...TCTACCCATAGAGGGCCTTGCAGCCTGATACCACCTGGGAGTGAGGGTCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CACAAGCTGCAGGACCTGGGAGCATTGCTACTTGGCCTCATTGTGTTGTCACCAATGATCACTGTGAAGTaGGTTTCATCTCGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: HKLQDLGALLLGLIVLSPMITVK*VSSRRP
Trigger: TGGCCTCCGAGATGAAACCAACTTCACAGTGATCAT...TGGTGACAACACAATGAGGCCAAGTAGCAATGCTCCCAGGTCCTGCAGCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATAGAGAACCTCCCCACTaGCCCTGGGCATGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: LARGQISLLLIRKLPNPDREPPH*PWACQG
Trigger: GCCTTGGCATGCCCAGGGCAAGTGGGGAGGTTCTCT...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 90 bp CATCTCCAGGTTCTTGATGGGATACAGGTACCACATCACTACCCCTaGAGGGTTGATGATCACTGTGAAGTTGGTTTCATCTCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: HLQVLDGIQVPHHYP*RVDDHCEVGFISEA
Trigger: GGCCTCCGAGATGAAACCAACTTCACAGTGATCATCAACCCTTCAGGGGTAGTGATGTGGTACCTGTATCCCATCAAGAACCTGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 90 bp TGGATGCCTAAGGGATCCTGGTTGATTTTGATCATGAGTGGATTCTaGAGAATGTCCATGTTCTGGGCGGAGATGGTACGCAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: WMPKGSWLILIMSGF*RMSMFWAEMVRRSV
Trigger: CACAGACCTGCGTACCATCTCCGCCCAGAACATGGACATTCTGCAGAATCCACTCATGATCAAAATCAACCAGGATCCCTTAGGCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp ACCCATCATTCCTTCACTTTGACTGTTACCCCTGTCCTTAGGAAGAGGGACAGGGACATCTCCAGGTTCTaGATGGGATACAGGTACCAC +
Preference number: 5 (lower is better)
Translates to: THHSFTLTVTPVLRKRDRDISRF*MGYRYH
Trigger: GTGGTACCTGTATCCCATCAAGAACCTGGAGATGTC...CCTGTCCCTCTTCCTAAGGACAGGGGTAACAGTCAAAGTGAAGGAATGATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp TTTGTGGACACATCTGGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAACGAAACAACGTGTCTaGGATGTCAGACCTCACACC +
Preference number: 5 (lower is better)
Translates to: FVDTSGEYEPPLQPGWERTKQRV*DVRPHT
Trigger: GGTGTGAGGTCTGACATCCAAGACACGTTGTTTCGT...TCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp ATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCGCATCCTGGACCACCTaGTCCAGTGTGGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: ISLLLIRKLPNPDFRVNSASWTT*SSVVPG
Trigger: CCCAGGCACCACACTGGACAAGGTGGTCCAGGATGC...GCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATAAGGCGCTAGCCTTGTaGGACAGAGGCCGCATGTAC +
Preference number: 5 (lower is better)
Translates to: LARGQISLLLIRKLPNPDKALAL*DRGRMY
Trigger: GTACATGCGGCCTCTGTCCAACAAGGCTAGCGCCTT...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GTAAAGACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTGTCTGCAGGAGCCCATaGTCCAGCATCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: VKTCSYLGLKGKGINWSSVCRSP*SSISTW
Trigger: CCAGGTGCTGATGCTGGACAATGGGCTCCTGCAGAC...ACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGTCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp TTTGTGGACACATCTGGGGAATATGAACCTCCTTTGCAGCCAGGTTGGGAGAGAGGATCCTGGTTGATTTaGATCATGAGTGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: FVDTSGEYEPPLQPGWERGSWLI*IMSGFC
Trigger: GCAGAATCCACTCATGATCAAAATCAACCAGGATCC...TCTCTCCCAACCTGGCTGCAAAGGAGGTTCATATTCCCCAGATGTGTCCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp ATTTTAAGACACAACTCCTGGACAGGTTTGTGGACACATCTGGGGAATATGAACAAGCAGCCATCCAGCTaGAGCATGTCTACCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ILRHNSWTGLWTHLGNMNKQPSS*SMSTFH
Trigger: GTGGAAGGTAGACATGCTCAAGCTGGATGGCTGCTT...GTTCATATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CATGATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGACCTAAGGGATCCTGGTaGATTTTGATCATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: HDPWAFLARGQISLLLIRPKGSW*ILIMSG
Trigger: TCCACTCATGATCAAAATCAACCAGGATCCCTTAGG...TCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp AACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAGGCTAGAGTCCTGATGATCACTGTGAAGTaGGTTTCATCTCGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: NFQILISESTARSEARVLMITVK*VSSRRP
Trigger: TGGCCTCCGAGATGAAACCAACTTCACAGTGATCAT...CAGGACTCTAGCCTCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp GATCCATGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAAACTACCCCTGAAGGGTaGATGATCACTGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: DPWAFLARGQISLLLIRKTTPEG*MITVKL
Trigger: CAACTTCACAGTGATCATCAACCCTTCAGGGGTAGT...TTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCATGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATCTTGGCCTCATTGTGTaGTCACCATCACCACTGCCA +
Preference number: 5 (lower is better)
Translates to: LARGQISLLLIRKLPNPDLGLIV*SPSPLP
Trigger: TGGCAGTGGTGATGGTGACAACACAATGAGGCCAAG...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CTACTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAAGCAGCCATCCAGCTaGAGCATGTCTACCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LLLIRKLPNPDFRVNSKVKQPSS*SMSTFH
Trigger: GTGGAAGGTAGACATGCTCAAGCTGGATGGCTGCTT...GACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp CTCCTAATTCGAAAACTTCCAAATCCTGATTTCAGAGTCAACAGCAAGGTCAGAAAGCAGCCATCCAGCTaGAGCATGTCTACCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LLIRKLPNPDFRVNSKVRKQPSS*SMSTFH
Trigger: GTGGAAGGTAGACATGCTCAAGCTGGATGGCTGCTT...TCTGACCTTGCTGTTGACTCTGAAATCAGGATTTGGAAGTTTTCGAATTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp TGGGCATTCCTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCACCTAAGGGATCCTGGTaGATTTTGATCATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: WAFLARGQISLLLIRKLPPKGSW*ILIMSG
Trigger: TCCACTCATGATCAAAATCAACCAGGATCCCTTAGG...TGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAGGAATGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS-3UTR CAA 90 bp ACATGTAGCTATCTTGGGCTGAAAGGTAAGGGAATTAATTGGTCAAGTCCAGGCACTACCCCTGAAGGGTaGATGATCACTGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TCSYLGLKGKGINWSSPGTTPEG*MITVKL
Trigger: CAACTTCACAGTGATCATCAACCCTTCAGGGGTAGT...GCCTGGACTTGACCAATTAATTCCCTTACCTTTCAGCCCAAGATAGCTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp ATTTTAAGACACAACTCCTGGACAGGTTTGTGGACACATCTGGGGAATATGAACCTAAAAGAGGAGGGCTaGGGAAATACGGACCAAAGC +
Preference number: 5 (lower is better)
Translates to: ILRHNSWTGLWTHLGNMNLKEEG*GNTDQS
Trigger: GCTTTGGTCCGTATTTCCCAAGCCCTCCTCTTTTAG...GTTCATATTCCCCAGATGTGTCCACAAACCTGTCCAGGAGTTGTGTCTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS-3UTR CAA 90 bp CTGGCAAGAGGTCAGATCTCTCTACTCCTAATTCGAAAACTTCCAAATCCTGATAAGAGAAAGGGTACCTaGCGTCCAAACAAGTCTGTA +
Preference number: 5 (lower is better)
Translates to: LARGQISLLLIRKLPNPDKRKGT*RPNKSV
Trigger: TACAGACTTGTTTGGACGCAAGGTACCCTTTCTCTT...ATCAGGATTTGGAAGTTTTCGAATTAGGAGTAGAGAGATCTGACCTCTTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS TCA 72 bp CCCGCTCCTCGGGGGTGGAGAAGCAGCCATCCAGCTTaGGCATGTCTACCTTCCACTCGGCGAAGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: PAPRGWRSSHPA*ACLPSTRRRSE
Trigger: CTCAGACCTTCGCCGAGTGGAAGGTAGACATGCTCAAGCTGGATGGCTGCTTCTCCACCCCCGAGGAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 72 bp TGCCCAGGGCCGGCCACTGGCTGCAGTATGTCCTGGTaGTCCACGAACCAATTCAGGATGGAGAGCACGCTC +
Preference number: 6 (lower is better)
Translates to: CPGPATGCSMSW*STNQFRMESTL
Trigger: GAGCGTGCTCTCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp GAGGGAAGCGCTTGGGATCCGGCATCAGGCGGCCACTaGCATCGCGACCACCGATCCAGCAGTCATCAATGT +
Preference number: 6 (lower is better)
Translates to: EGSAWDPASGGH*HRDHRSSSHQC
Trigger: ACATTGATGACTGCTGGATCGGTGGTCGCGATGCCAGTGGCCGCCTGATGCCGGATCCCAAGCGCTTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp AGTCAGCCAGGAAAGGAATGCCATGAGGGAAGCGCTTaGGATCCGGCATCAGGCGGCCACTGGCATCGCGAC +
Preference number: 6 (lower is better)
Translates to: SQPGKECHEGSA*DPASGGHWHRD
Trigger: GTCGCGATGCCAGTGGCCGCCTGATGCCGGATCCCAAGCGCTTCCCTCATGGCATTCCTTTCCTGGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp CAGTGCCCAGGGCCGGCCACTGGCTGCAGTATGTCCTaGTGCTCCACGAACCAATTCAGGATGGAGAGCACG +
Preference number: 6 (lower is better)
Translates to: QCPGPATGCSMS*CSTNQFRMEST
Trigger: CGTGCTCTCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 72 bp GGCCCAGGGAGTGAACGTAGTCAGCCAGGAAAGGAATaGCATGAGGGAAGCGCTTGGGATCCGGCATCAGGC +
Preference number: 6 (lower is better)
Translates to: GPGSERSQPGKE*HEGSAWDPASG
Trigger: GCCTGATGCCGGATCCCAAGCGCTTCCCTCATGGCATTCCTTTCCTGGCTGACTACGTTCACTCCCTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 72 bp TCAGGGTCATTCCAGTGCCCAGGGCCGGCCACTGGCTaGAGTATGTCCTGGTGCTCCACGAACCAATTCAGG +
Preference number: 6 (lower is better)
Translates to: SGSFQCPGPATG*SMSWCSTNQFR
Trigger: CCTGAATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCACTGGAATGACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp GGTGTCTGCAGGAGCCCATTGTCCAGCATCAGCACCTaGGCCACATGTCCCAGCAAGAGCACTGTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: GVCRSPLSSIST*ATCPSKSTVFS
Trigger: GCTGAAGACAGTGCTCTTGCTGGGACATGTGGCCCAGGTGCTGATGCTGGACAATGGGCTCCTGCAGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp CTGAGCATCCTGGACCACCTTGTCCAGTGTGGTGCCTaGGTAACCCATGCAGGTGAAGTTGCCCATGTCCGC +
Preference number: 6 (lower is better)
Translates to: LSILDHLVQCGA*VTHAGEVAHVR
Trigger: GCGGACATGGGCAACTTCACCTGCATGGGTTACCCAGGCACCACACTGGACAAGGTGGTCCAGGATGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp CATGTCAGGGTCATTCCAGTGCCCAGGGCCGGCCACTaGCTGCAGTATGTCCTGGTGCTCCACGAACCAATT +
Preference number: 6 (lower is better)
Translates to: HVRVIPVPRAGH*LQYVLVLHEPI
Trigger: AATTGGTTCGTGGAGCACCAGGACATACTGCAGCCAGTGGCCGGCCCTGGGCACTGGAATGACCCTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp GACCAGATCTGGTCTGCGTGTATCAGCTGTATGTGTTaGGCTCTGGAAGCGAAGCGTTCAGACCTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: DQIWSACISCMC*ALEAKRSDLPP
Trigger: CGGCGGCAGGTCTGAACGCTTCGCTTCCAGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402937.1
CDS TCA 72 bp TGTTGGGCTCGAAGCGTTCAGACCTGCCGCCGCTTCTaGCTCGAATCCGGTAACCTGATAAGTCCGAAGCGT +
Preference number: 6 (lower is better)
Translates to: CWARSVQTCRRF*LESGNLISPKR
Trigger: ACGCTTCGGACTTATCAGGTTACCGGATTCGAGTCAGAAGCGGCGGCAGGTCTGAACGCTTCGAGCCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403363.5
CDS TCA 72 bp AGCTTGAGCATGTCTACCTTCCACTCGGCGAAGGTCTaGGCATCCTGGACCACCTTGTCCAGTGTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SLSMSTFHSAKV*ASWTTLSSVVP
Trigger: AGGCACCACACTGGACAAGGTGGTCCAGGATGCTCAGACCTTCGCCGAGTGGAAGGTAGACATGCTCAAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 72 bp CTCTGGAAGCGAAGCGTTCAGACCTGCCGCCGCTTCTaGCTCGAATCCGGTAACCTGATAAGTCCGAAGCGT +
Preference number: 6 (lower is better)
Translates to: LWKRSVQTCRRF*LESGNLISPKR
Trigger: ACGCTTCGGACTTATCAGGTTACCGGATTCGAGTCAGAAGCGGCGGCAGGTCTGAACGCTTCGCTTCCAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402937.1
CDS GCA 72 bp GAGGTATGTGTAGCCCATGTCCCGCCATCCATCCTGTaGCATCCGGTCAGCCATCTCCATGAAGAGCTGTTC +
Preference number: 6 (lower is better)
Translates to: EVCVAHVPPSIL*HPVSHLHEELF
Trigger: GAACAGCTCTTCATGGAGATGGCTGACCGGATGGCACAGGATGGATGGCGGGACATGGGCTACACATACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp CGCTCTGGACTCAGCTTCCGAGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGTATGTGTTGGGCTCGA +
Preference number: 6 (lower is better)
Translates to: RSGLSFRGPDQI*SACISCMCWAR
Trigger: TCGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403363.5
CDS CCA 72 bp CGCTCTGGACTCAGCTTCCGAGGACCTGACCAGATCTaGTCTGCGTGTATCAGCTGTATGTGTTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: RSGLSFRGPDQI*SACISCMCWAL
Trigger: CAGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396398.8
ENST00000402937.1
CDS TCA 72 bp TCAGCAGCATCGCTCTGGACTCAGCTTCCGAGGACCTaGCCAGATCTGGTCTGCGTGTATCAGCTGTATGTG +
Preference number: 6 (lower is better)
Translates to: SAASLWTQLPRT*PDLVCVYQLYV
Trigger: CACATACAGCTGATACACGCAGACCAGATCTGGTCAGGTCCTCGGAAGCTGAGTCCAGAGCGATGCTGCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 72 bp TGGCATCGCGACCACCGATCCAGCAGTCATCAATGTTaGGGTATGTGTAGCCCATGTCCCGCCATCCATCCT +
Preference number: 6 (lower is better)
Translates to: WHRDHRSSSHQC*GMCSPCPAIHP
Trigger: AGGATGGATGGCGGGACATGGGCTACACATACCTCAACATTGATGACTGCTGGATCGGTGGTCGCGATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 72 bp CCTTGTCCAGTGTGGTGCCTGGGTAACCCATGCAGGTaGAGTTGCCCATGTCCGCGTAGATACCCAACTTCA +
Preference number: 6 (lower is better)
Translates to: PCPVWCLGNPCR*SCPCPRRYPTS
Trigger: TGAAGTTGGGTATCTACGCGGACATGGGCAACTTCACCTGCATGGGTTACCCAGGCACCACACTGGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 72 bp AGTAGACGTCCTGGGCCTCATATATCACAGACCCGGTaGAGTTCAGCTGGCCAAGGGAGGAGTGGTAGCGAT +
Preference number: 6 (lower is better)
Translates to: SRRPGPHISQTR*SSAGQGRSGSD
Trigger: ATCGCTACCACTCCTCCCTTGGCCAGCTGAACTTCACCGGGTCTGTGATATATGAGGCCCAGGACGTCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp GCAGTATGTCCTGGTGCTCCACGAACCAATTCAGGATaGAGAGCACGCTCCACCAGGAGTCCTGGATGTCAT +
Preference number: 6 (lower is better)
Translates to: AVCPGAPRTNSG*RARSTRSPGCH
Trigger: ATGACATCCAGGACTCCTGGTGGAGCGTGCTCTCCATCCTGAATTGGTTCGTGGAGCACCAGGACATACTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 72 bp TCCCAGCTCCTCACTGCTGGGACATCTCCAGGTTCTTaGTGGGATACAGGTACCACATCACTACCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: SQLLTAGTSPGS*WDTGTTSLPLK
Trigger: CTTCAGGGGTAGTGATGTGGTACCTGTATCCCATCAAGAACCTGGAGATGTCCCAGCAGTGAGGAGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CAA 72 bp TCGGTCCTGCAGCTGAAGAAGACTAAGGCGCTAGCCTaGTTGGACAGAGGCCGCATGTACACTTCGATGAGA +
Preference number: 6 (lower is better)
Translates to: SVLQLKKTKALA*LDRGRMYTSMR
Trigger: TCTCATCGAAGTGTACATGCGGCCTCTGTCCAACAAGGCTAGCGCCTTAGTCTTCTTCAGCTGCAGGACCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CAA 72 bp GTCCCAGCTCCTCACTGCTGGGACATCTCCAGGTTCTaGATGGGATACAGGTACCACATCACTACCCCTGAA +
Preference number: 6 (lower is better)
Translates to: VPAPHCWDISRF*MGYRYHITTPE
Trigger: TTCAGGGGTAGTGATGTGGTACCTGTATCCCATCAAGAACCTGGAGATGTCCCAGCAGTGAGGAGCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CAA 90 bp TCCCGGAGCTTCAGTTCTTCCTTCAGAAATACGAAACAACGTGTCTaGGATGTCAGACCTCACACCCTCTGCAGTGCTGGGAGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: SRSFSSSFRNTKQRV*DVRPHTLCSAGSPE
Trigger: CTCGGGACTCCCAGCACTGCAGAGGGTGTGAGGTCTGACATCCAAGACACGTTGTTTCGTATTTCTGAAGGAAGAACTGAAGCTCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS TCA 72 bp GCCATCCATCCTGTGCCATCCGGTCAGCCATCTCCATaGAGAGCTGTTCACTTATGCAGTTCTTTGGGTCCT +
Preference number: 6 (lower is better)
Translates to: AIHPVPSGQPSP*RAVHLCSSLGP
Trigger: AGGACCCAAAGAACTGCATAAGTGAACAGCTCTTCATGGAGATGGCTGACCGGATGGCACAGGATGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 72 bp GTTGGTTTCATCTCGGAGGCCACTGATGATGTCACCTaGGTAGACGTCCTGGGCCTCATATATCACAGACCC +
Preference number: 6 (lower is better)
Translates to: VGFISEATDDVT*VDVLGLIYHRP
Trigger: GGGTCTGTGATATATGAGGCCCAGGACGTCTACTCAGGTGACATCATCAGTGGCCTCCGAGATGAAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 72 bp AGGAGTCCTGGATGTCATCATAGTTACGCCAGAGGTTaGAGATGTCCGCCAGCAGACTGTAGTTCACCCTTG +
Preference number: 6 (lower is better)
Translates to: RSPGCHHSYARG*RCPPADCSSPL
Trigger: CAAGGGTGAACTACAGTCTGCTGGCGGACATCTGCAACCTCTGGCGTAACTATGATGACATCCAGGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp TTGATCATGAGTGGATTCTGCAGAATGTCCATGTTCTaGGCGGAGATGGTACGCAGGTCTGTGGACATCAAG +
Preference number: 6 (lower is better)
Translates to: LIMSGFCRMSMF*AEMVRRSVDIK
Trigger: CTTGATGTCCACAGACCTGCGTACCATCTCCGCCCAGAACATGGACATTCTGCAGAATCCACTCATGATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CAA 90 bp AGGTTCTTGATGGGATACAGGTACCACATCACTACCCCTGAAGGGTaGATGATCACTGTGAAGTTGGTTTCATCTCGGAGGCCACTGATG +
Preference number: 6 (lower is better)
Translates to: RFLMGYRYHITTPEG*MITVKLVSSRRPLM
Trigger: CATCAGTGGCCTCCGAGATGAAACCAACTTCACAGTGATCATCAACCCTTCAGGGGTAGTGATGTGGTACCTGTATCCCATCAAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS GCA 72 bp AAGGGATCCTGGTTGATTTTGATCATGAGTGGATTCTaGAGAATGTCCATGTTCTGGGCGGAGATGGTACGC +
Preference number: 6 (lower is better)
Translates to: KGSWLILIMSGF*RMSMFWAEMVR
Trigger: GCGTACCATCTCCGCCCAGAACATGGACATTCTGCAGAATCCACTCATGATCAAAATCAACCAGGATCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CCA 72 bp GACCAGATCTGGTCTGCGTGTATCAGCTGTATGTGTTaGGCTCTGGAAGCTAAGAAACGTCTGAAAAGCACT +
Preference number: 6 (lower is better)
Translates to: DQIWSACISCMC*ALEAKKRLKST
Trigger: AGTGCTTTTCAGACGTTTCTTAGCTTCCAGAGCCCAACACATACAGCTGATACACGCAGACCAGATCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS CAA 72 bp CTGCGTCCCTGGATGCCTAAGGGATCCTGGTTGATTTaGATCATGAGTGGATTCTGCAGAATGTCCATGTTC +
Preference number: 6 (lower is better)
Translates to: LRPWMPKGSWLI*IMSGFCRMSMF
Trigger: GAACATGGACATTCTGCAGAATCCACTCATGATCAAAATCAACCAGGATCCCTTAGGCATCCAGGGACGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CAA 72 bp ATGGGATACAGGTACCACATCACTACCCCTGAAGGGTaGATGATCACTGTGAAGTTGGTTTCATCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: MGYRYHITTPEG*MITVKLVSSRR
Trigger: CCTCCGAGATGAAACCAACTTCACAGTGATCATCAACCCTTCAGGGGTAGTGATGTGGTACCTGTATCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS CAA 72 bp TTCAGTTCTTCCTTCAGAAATACGAAACAACGTGTCTaGGATGTCAGACCTCACACCCTCTGCAGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: FSSSFRNTKQRV*DVRPHTLCSAG
Trigger: CCCAGCACTGCAGAGGGTGTGAGGTCTGACATCCAAGACACGTTGTTTCGTATTTCTGAAGGAAGAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396398.8
CDS CCA 72 bp CATCTCCATGAAGAGCTGTTCACTTATGCAGTTCTTTaGGTCCTCATCACAGTTAATGTTGCAGCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: HLHEELFTYAVL*VLITVNVAAEA
Trigger: CGCTTCCGCTGCAACATTAACTGTGATGAGGACCCAAAGAACTGCATAAGTGAACAGCTCTTCATGGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5
CDS TCA 72 bp GTTCTTGATGGGATACAGGTACCACATCACTACCCCTaGAGGGTTGATGATCACTGTGAAGTTGGTTTCATC +
Preference number: 6 (lower is better)
Translates to: VLDGIQVPHHYP*RVDDHCEVGFI
Trigger: GATGAAACCAACTTCACAGTGATCATCAACCCTTCAGGGGTAGTGATGTGGTACCTGTATCCCATCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396398.8
ENST00000402937.1
ENST00000403363.5