RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAA80 (Homo sapiens)

Ensembl gene IDs: ENSG00000243477

Ensembl transcript IDs: ENST00000354862.4, ENST00000417393.1, ENST00000442620.5, ENST00000443094.3, ENST00000443842.1, ENST00000450489.1, ENST00000452674.1

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGCTGAGGTATGGTCAGTaGGCTGAGGCTTGTAGACTG +
Preference number: 2 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLLRYGQ*AEACRL
Trigger: CAGTCTACAAGCCTCAGCCCACTGACCATACCTCAG...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
3UTR-3UTR TCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGTCGGGGCAGTCTATTaGACCAGAAAGACAGTTCCT +
Preference number: 2 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKVGAVY*TRKTVP
Trigger: AGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGAC...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
3UTR-3UTR TCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGTCGGGGCAGTCTATTaGACCAGAAAGACAGTTCCT +
Preference number: 2 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLVGAVY*TRKTVP
Trigger: AGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGAC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCCTCCAGGCCCTCCATaGGGCGGCGGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKPPGPP*GGGQSH
Trigger: GTGGCTTTGGCCGCCGCCTCATGGAGGGCCTGGAGG...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGCCTCCAGGCCCTCCATaGGGCGGCGGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLPPGPP*GGGQSH
Trigger: GTGGCTTTGGCCGCCGCCTCATGGAGGGCCTGGAGG...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGGTTTGGGGCCTTCCTaGGTGGCCGGGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLGLGPS*VAGERG
Trigger: CCCCCTCTCCCCGGCCACCCAGGAAGGCCCCAAACC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGGAGGGGGAAGGCATCTaGGGACTGGCCCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKEGEGI*GLAQGV
Trigger: CACTCCCTGGGCCAGTCCTCAGATGCCTTCCCCCTC...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR GCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGTTGGCCCCCAGCGGTaGGGCGGATGTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKVGPQR*GGCSAA
Trigger: GGCTGCAGAACATCCGCCGCACCGCTGGGGGCCAAC...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354862.4
ENST00000443094.3
CDS-3UTR GCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGAGCTCGGGTCGGCGGTaGACAGGCTCCAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKSSGRR*TGSRVN
Trigger: GTTGACCCTGGAGCCTGTGCACCGCCGACCCGAGCT...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR GCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGAGTGCAGGCGGGAGGTaGGGCTGCGGGGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLSAGGR*GCGATD
Trigger: ATCAGTGGCCCCGCAGCCGCACCTCCCGCCTGCACT...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR GCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAAGTGCAGGCGGGAGGTaGGGCTGCGGGGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKSAGGR*GCGATD
Trigger: ATCAGTGGCCCCGCAGCCGCACCTCCCGCCTGCACT...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGAGGGGGAAGGCATCTaGGGACTGGCCCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLEGEGI*GLAQGV
Trigger: CACTCCCTGGGCCAGTCCTCAGATGCCTTCCCCCTC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGCAGCCGTCTGCTGGTaGAGACCAGGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLAAVCW*RPGPAQ
Trigger: CTGTGCAGGGCCTGGTCTTCACCAGCAGACGGCTGC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR GCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGCAGCCGTCGCGTCCTaGGGCACGCCACGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQAAVAS*GTPRRS
Trigger: AGAACGCCGTGGCGTGCCGCAGGACGCGACGGCTGC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGAGCCAGGCTAGGAGCTaGGGTCTCCTCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKSQARS*GLLWLV
Trigger: CACCAGCCAGAGGAGACCCCAGCTCCTAGCCTGGCT...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACCCTCCAGGCCCTCCATaGGGCGGCGGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDPPGPP*GGGQSH
Trigger: GTGGCTTTGGCCGCCGCCTCATGGAGGGCCTGGAGG...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGCAGCCGTCGCGTCCTaGGGCACGCCACGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDAAVAS*GTPRRS
Trigger: AGAACGCCGTGGCGTGCCGCAGGACGCGACGGCTGC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGTTGGCCCCCAGCGGTaGGGCGGATGTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQVGPQR*GGCSAA
Trigger: GGCTGCAGAACATCCGCCGCACCGCTGGGGGCCAAC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCACCACAACGGGTGCTaGTTCAAGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKHHNGC*FKCGVG
Trigger: CCCCACCCCACACTTGAAGCAGCACCCGTTGTGGTG...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAAAGGCATCTGAGGACTaGCCCAGGGAGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKKASED*PRECRR
Trigger: CCGCCTGCACTCCCTGGGCCAGTCCTCAGATGCCTT...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGAAGAGGCTCTGGGGCTaGTTCAGCACCCGTGACAGG +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKKRLWG*FSTRDR
Trigger: CCTGTCACGGGTGCTGAACCAGCCCCAGAGCCTCTT...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGGTTTGGGGCCTTCCTaGGTGGCCGGGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDGLGPS*VAGERG
Trigger: CCCCCTCTCCCCGGCCACCCAGGAAGGCCCCAAACC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGGTTTGGGGCCTTCCTaGGTGGCCGGGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGGLGPS*VAGERG
Trigger: CCCCCTCTCCCCGGCCACCCAGGAAGGCCCCAAACC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCCTCCAGGCCCTCCATaGGGCGGCGGCCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMPPGPP*GGGQSH
Trigger: GTGGCTTTGGCCGCCGCCTCATGGAGGGCCTGGAGG...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAACCTGGTCATGGGTGGTaGGATGCAGCTTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKPGHGW*DAACGS
Trigger: GCTTCCGCAAGCTGCATCTCACCACCCATGACCAGG...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGCAGCCGTCTGCTGGTaGAGACCAGGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQAAVCW*RPGPAQ
Trigger: CTGTGCAGGGCCTGGTCTTCACCAGCAGACGGCTGC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGCAGCCGTCGCGTCCTaGGGCACGCCACGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALAAVAS*GTPRRS
Trigger: AGAACGCCGTGGCGTGCCGCAGGACGCGACGGCTGC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGTGCGGCGGATGTTCTaGAGCCGTCGCGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGVRRMF*SRRVLR
Trigger: CCGCAGGACGCGACGGCTGCAGAACATCCGCCGCAC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGTTGGCCCCCAGCGGTaGGGCGGATGTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGVGPQR*GGCSAA
Trigger: GGCTGCAGAACATCCGCCGCACCGCTGGGGGCCAAC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAACACCACAACGGGTGCTaGTTCAAGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKHHNGC*FKCGVG
Trigger: CCCCACCCCACACTTGAAGCAGCACCCGTTGTGGTG...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR GCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGCCCACCACAACGGGTaGTGCTTCAAGTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLAHHNG*CFKCGV
Trigger: CACCCCACACTTGAAGCAGCACCCGTTGTGGTGGGC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR GCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAATCATGGGTGGTGAGATaGAGCTTGCGGAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKSWVVR*SLRKPR
Trigger: CCGGGGCTTCCGCAAGCTGCATCTCACCACCCATGA...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAATCCAGGGGCAGCTTTaGCTGGCACGCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKIQGQL*LARRIQ
Trigger: CTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGAT...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGGCTTCAAGTGTGGGGTaGGGGCTTAGCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKASSVG*GLSSIR
Trigger: CCTGATGCTGCTAAGCCCCCACCCCACACTTGAAGC...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGCGTGACAGGCGGGCATaGCCCACCACAACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQRDRRA*PTTTGA
Trigger: AGCACCCGTTGTGGTGGGCCATGCCCGCCTGTCACG...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGGTTTGGGGCCTTCCTaGGTGGCCGGGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALGLGPS*VAGERG
Trigger: CCCCCTCTCCCCGGCCACCCAGGAAGGCCCCAAACC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGAGGGGGAAGGCATCTaGGGACTGGCCCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDEGEGI*GLAQGV
Trigger: CACTCCCTGGGCCAGTCCTCAGATGCCTTCCCCCTC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGAGGGGGAAGGCATCTaGGGACTGGCCCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGEGEGI*GLAQGV
Trigger: CACTCCCTGGGCCAGTCCTCAGATGCCTTCCCCCTC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCTGGTTCAGCACCCGTaGCAGGCGGGCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMLVQHP*QAGMAH
Trigger: GTGGGCCATGCCCGCCTGTCACGGGTGCTGAACCAG...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCTGGTTCAGCACCCGTaGCAGGCGGGCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALLVQHP*QAGMAH
Trigger: GTGGGCCATGCCCGCCTGTCACGGGTGCTGAACCAG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGCAGCCGTCTGCTGGTaGAGACCAGGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDAAVCW*RPGPAQ
Trigger: CTGTGCAGGGCCTGGTCTTCACCAGCAGACGGCTGC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGAGTGCAGGCGGGAGGTaGGGCTGCGGGGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALSAGGR*GCGATD
Trigger: ATCAGTGGCCCCGCAGCCGCACCTCCCGCCTGCACT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGTCAGCTCAGCTGGGCTaGTACTCAGGATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKSAQLG*YSGSAP
Trigger: TGGAGCTGATCCTGAGTACCAGCCCAGCTGAGCTGA...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGGGGTCTCCTCTGGCTaGTGTTCAGGATCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLGVSSG*CSGSRV
Trigger: TACCCTGGATCCTGAACACCAGCCAGAGGAGACCCC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGTGCTGCTTCAAGTGTaGGGTGGGGGCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKVLLQV*GGGLAA
Trigger: TGCTGCTAAGCCCCCACCCCACACTTGAAGCAGCAC...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACCGTGACAGGCGGGCATaGCCCACCACAACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDRDRRA*PTTTGA
Trigger: AGCACCCGTTGTGGTGGGCCATGCCCGCCTGTCACG...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAATCCACTAAGAGGCTCTaGGGCTGGTTCAGCACCCGT +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKSTKRL*GWFSTR
Trigger: ACGGGTGCTGAACCAGCCCCAGAGCCTCTTAGTGGA...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTCTGGTTCAGCACCCGTaGCAGGCGGGCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLLVQHP*QAGMAH
Trigger: GTGGGCCATGCCCGCCTGTCACGGGTGCTGAACCAG...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGTGCGGCGGATGTTCTaGAGCCGTCGCGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLVRRMF*SRRVLR
Trigger: CCGCAGGACGCGACGGCTGCAGAACATCCGCCGCAC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGAGCTCGGGTCGGCGGTaGACAGGCTCCAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALSSGRR*TGSRVN
Trigger: GTTGACCCTGGAGCCTGTGCACCGCCGACCCGAGCT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGAGCTCGGGTCGGCGGTaGACAGGCTCCAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMSSGRR*TGSRVN
Trigger: GTTGACCCTGGAGCCTGTGCACCGCCGACCCGAGCT...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTAGTGCAGGCGGGAGGTaGGGCTGCGGGGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLSAGGR*GCGATD
Trigger: ATCAGTGGCCCCGCAGCCGCACCTCCCGCCTGCACT...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGAAGGTCATCTCTGGTTaGCATGTGGAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKKVISG*HVESRG
Trigger: GCCCCTGGATTCCACATGCCAACCAGAGATGACCTT...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCAGCCAGGCTAGGAGCTaGGGTCTCCTCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGSQARS*GLLWLV
Trigger: CACCAGCCAGAGGAGACCCCAGCTCCTAGCCTGGCT...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCGTGACAGGCGGGCATaGCCCACCACAACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALRDRRA*PTTTGA
Trigger: AGCACCCGTTGTGGTGGGCCATGCCCGCCTGTCACG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCGTGACAGGCGGGCATaGCCCACCACAACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMRDRRA*PTTTGA
Trigger: AGCACCCGTTGTGGTGGGCCATGCCCGCCTGTCACG...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGCAATGGAGGTCCCTTaGGACCCCTTGGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQAMEVP*DPLGQL
Trigger: AAGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGACCTCCTGGCCCCACTaGTACCCAGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQTSWPH*YPGNMP
Trigger: GGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGT...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGCTGCTAGGTTGCAGGTaGCTCAGTGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQLLGCR*LSARLE
Trigger: CTCCAGCCTGGCACTGAGCCACCTGCAACCTAGCAG...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGCAGTTGGACCAGGATTaGAGGTCATCTCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLQLDQD*RSSLVG
Trigger: GCCAACCAGAGATGACCTTCAATCCTGGTCCAACTG...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR TCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCCCTGGTCATGGGTGGTaGGATGCAGCTTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGPGHGW*DAACGS
Trigger: GCTTCCGCAAGCTGCATCTCACCACCCATGACCAGG...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGAGGGAGGCTGGGAGTaGTGGATGAGCTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQEGGWE*WMSCLR
Trigger: CCTTAAGCAGCTCATCCATCACTCCCAGCCTCCCTC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTAGCTCGGGTCGGCGGTaGACAGGCTCCAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLSSGRR*TGSRVN
Trigger: GTTGACCCTGGAGCCTGTGCACCGCCGACCCGAGCT...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCCACCACAACGGGTGCTaGTTCAAGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGHHNGC*FKCGVG
Trigger: CCCCACCCCACACTTGAAGCAGCACCCGTTGTGGTG...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGCCCACCACAACGGGTaGTGCTTCAAGTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDAHHNG*CFKCGV
Trigger: CACCCCACACTTGAAGCAGCACCCGTTGTGGTGGGC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTCATGGGTGGTGAGATaGAGCTTGCGGAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGSWVVR*SLRKPR
Trigger: CCGGGGCTTCCGCAAGCTGCATCTCACCACCCATGA...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACTGCATCAGCCACCTCTaGAGCAGCCGCACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDCISHL*SSRTLW
Trigger: CCAAAGGGTGCGGCTGCTGCAGAGGTGGCTGATGCA...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417393.1
CDS-3UTR GCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGTGGGGAGTGGTGGGCTaGACTTTGTCCCACACTCAC +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQWGVVG*TLSHTH
Trigger: GTGAGTGTGGGACAAAGTGCAGCCCACCACTCCCCA...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR GCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGTCAGCTCTTGCCTATaGACAGGATCCAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLVSSCL*TGSRFS
Trigger: GCTGAACCTGGATCCTGTGCATAGGCAAGAGCTGAC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443094.3
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACATCCAGGGGCAGCTTTaGCTGGCACGCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDIQGQL*LARRIQ
Trigger: CTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGAT...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGTCTCTGGTTGGCATGTaGAATCCAGGGGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLSLVGM*NPGAAL
Trigger: CAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGA...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGGGGTCTCCTCTGGCTaGTGTTCAGGATCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQGVSSG*CSGSRV
Trigger: TACCCTGGATCCTGAACACCAGCCAGAGGAGACCCC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAGCTGGGGTCTCCTCTaGCTGGTGTTCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQSWGLL*LVFRIQ
Trigger: CTGGATCCTGAACACCAGCCAGAGGAGACCCCAGCT...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGAAGGCATCTGAGGACTaGCCCAGGGAGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALKASED*PRECRR
Trigger: CCGCCTGCACTCCCTGGGCCAGTCCTCAGATGCCTT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGAAGGCATCTGAGGACTaGCCCAGGGAGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMKASED*PRECRR
Trigger: CCGCCTGCACTCCCTGGGCCAGTCCTCAGATGCCTT...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAAGAGGCTCTGGGGCTaGTTCAGCACCCGTGACAGG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDKRLWG*FSTRDR
Trigger: CCTGTCACGGGTGCTGAACCAGCCCCAGAGCCTCTT...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGAAGTGCACCTGGTCATaGGTGGTGAGATGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLKCTWS*VVRCSL
Trigger: CAAGCTGCATCTCACCACCCATGACCAGGTGCACTT...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGCAATGGAGGTCCCTTaGGACCCCTTGGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGAMEVP*DPLGQL
Trigger: AAGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGGTTCCTTGCCCTGGATaGCCTCAGATGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKVPCPG*PQMSFS
Trigger: GGAAAAAGACATCTGAGGCCATCCAGGGCAAGGAAC...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAACTGAGGTATGGTCAGTaGGCTGAGGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKLRYGQ*AEACRL
Trigger: CAGTCTACAAGCCTCAGCCCACTGACCATACCTCAG...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCACCTCCTGGCCCCACTaGTACCCAGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGTSWPH*YPGNMP
Trigger: GGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGT...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGGGGACCATGCATACTaGAACTGGGGAGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDGDHAY*NWGVVG
Trigger: GCCCACCACTCCCCAGTTCCAGTATGCATGGTCCCC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR TCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCGGCTGCGGGGCCACTaGTCATTGATGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALRLRGH*SLMRSA
Trigger: TGCTGACCTCATCAATGATCAGTGGCCCCGCAGCCG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCGGCTGCGGGGCCACTaGTCATTGATGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMRLRGH*SLMRSA
Trigger: TGCTGACCTCATCAATGATCAGTGGCCCCGCAGCCG...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCCTGGTCATGGGTGGTaGGATGCAGCTTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALPGHGW*DAACGS
Trigger: GCTTCCGCAAGCTGCATCTCACCACCCATGACCAGG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCACCACAACGGGTGCTaGTTCAAGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALHHNGC*FKCGVG
Trigger: CCCCACCCCACACTTGAAGCAGCACCCGTTGTGGTG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGAGAAAGACAGTTCCTTaGCCTGGATGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLRKTVP*PGWPQM
Trigger: CATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCT...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR GCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGAGTCAGCTCTTGCCTaGATCAGCCACCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGESALA*ISHLCS
Trigger: GCTGCAGAGGTGGCTGATGCAGGCAAGAGCTGACTC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417393.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGAGGGGCAGCTTTGGCTaGCACGCAGGATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALRGSFG*HAGSRV
Trigger: GACTCTGGATCCTGCGTGCCAGCCAAAGCTGCCCCT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGATCCAGGGGCAGCTTTaGCTGGCACGCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMIQGQL*LARRIQ
Trigger: CTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGAT...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATAGCCAGGCTAGGAGCTaGGGTCTCCTCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDSQARS*GLLWLV
Trigger: CACCAGCCAGAGGAGACCCCAGCTCCTAGCCTGGCT...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTAGCCAGGCTAGGAGCTaGGGTCTCCTCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLSQARS*GLLWLV
Trigger: CACCAGCCAGAGGAGACCCCAGCTCCTAGCCTGGCT...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGCTTCAAGTGTGGGGTaGGGGCTTAGCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDASSVG*GLSSIR
Trigger: CCTGATGCTGCTAAGCCCCCACCCCACACTTGAAGC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGCTTCAAGTGTGGGGTaGGGGCTTAGCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGASSVG*GLSSIR
Trigger: CCTGATGCTGCTAAGCCCCCACCCCACACTTGAAGC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGTGCTGCTTCAAGTGTaGGGTGGGGGCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGVLLQV*GGGLAA
Trigger: TGCTGCTAAGCCCCCACCCCACACTTGAAGCAGCAC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACTCCACTAAGAGGCTCTaGGGCTGGTTCAGCACCCGT +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDSTKRL*GWFSTR
Trigger: ACGGGTGCTGAACCAGCCCCAGAGCCTCTTAGTGGA...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCAATGGAGGTCCCTTaGGACCCCTTGGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMAMEVP*DPLGQL
Trigger: AAGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGCAATGGAGGTCCCTTaGGACCCCTTGGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALAMEVP*DPLGQL
Trigger: AAGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGAACTGGGGGTGAGATaGTCAGGCACTCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDELGVR*SGTQVG
Trigger: CCCTACCTGAGTGCCTGACCATCTCACCCCCAGTTC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGTTTCCATCCAGAATATaGGGCGCCCCCTCACATTTT +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKFPSRI*GAPSHF
Trigger: AAAATGTGAGGGGGCGCCCCATATTCTGGATGGAAA...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGGCCCCAGCCTGCTCTaGCTACAAATTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQGPSLL*LQICPP
Trigger: AGGAGGACAAATTTGTAGCCAGAGCAGGCTGGGGCC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGGCTCAGTGCCAGGCTaGAGGTTAAGACCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDGSVPG*RLRPQS
Trigger: AGACTGGGGTCTTAACCTCCAGCCTGGCACTGAGCC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTCAGCTGAGTCAGGCTaGGAGCCAAGGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGSAESG*EPRSPA
Trigger: AGCAGGTGACCTTGGCTCCCAGCCTGACTCAGCTGA...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
3UTR CAA 72 bp AGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATaGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SGLRLVDCRGSL*NQKDSSLPWMA
Trigger: GGCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTCGGCTGCGGGGCCACTaGTCATTGATGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLRLRGH*SLMRSA
Trigger: TGCTGACCTCATCAATGATCAGTGGCCCCGCAGCCG...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATCGGCTGCGGGGCCACTaGTCATTGATGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDRLRGH*SLMRSA
Trigger: TGCTGACCTCATCAATGATCAGTGGCCCCGCAGCCG...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGGATCCAGGTTCAGCTaGGTCAGGCTGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLGSRFS*VRLGAK
Trigger: CTTGGCTCCCAGCCTGACTCAGCTGAACCTGGATCC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACTGGCTCTCCTCATGTTaGTGCTGGCCTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDWLSSC*CWPLGC
Trigger: ACATCCCAGAGGCCAGCATCAACATGAGGAGAGCCA...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443094.3
CDS-3UTR GCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCACCACAACGGGTaGTGCTTCAAGTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLAHHNG*CFKCGV
Trigger: CACCCCACACTTGAAGCAGCACCCGTTGTGGTGGGC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTTCATGGGTGGTGAGATaGAGCTTGCGGAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLSWVVR*SLRKPR
Trigger: CCGGGGCTTCCGCAAGCTGCATCTCACCACCCATGA...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGTCCTGGCCCCAGCCTaGTCTGGCTACAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDVLAPA*SGYKFV
Trigger: GACAAATTTGTAGCCAGAGCAGGCTGGGGCCAGGAC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTCAGCTCAGCTGGGCTaGTACTCAGGATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGSAQLG*YSGSAP
Trigger: TGGAGCTGATCCTGAGTACCAGCCCAGCTGAGCTGA...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATATCCAGGGGCAGCTTTaGCTGGCACGCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDIQGQL*LARRIQ
Trigger: CTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGAT...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGATTGAAGGTCATCTCTaGTTGGCATGTGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKIEGHL*LACGIQ
Trigger: CTGGATTCCACATGCCAACCAGAGATGACCTTCAAT...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGCAGGGTAAGCTCAGTTaGACCAGGATTGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLQGKLS*TRIEGH
Trigger: ATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTG...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGGGGTCTCCTCTGGCTaGTGTTCAGGATCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALGVSSG*CSGSRV
Trigger: TACCCTGGATCCTGAACACCAGCCAGAGGAGACCCC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGAGCTGGGGTCTCCTCTaGCTGGTGTTCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALSWGLL*LVFRIQ
Trigger: CTGGATCCTGAACACCAGCCAGAGGAGACCCCAGCT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTTCAAGTGTGGGGTaGGGGCTTAGCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMASSVG*GLSSIR
Trigger: CCTGATGCTGCTAAGCCCCCACCCCACACTTGAAGC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGTGCTGCTTCAAGTGTaGGGTGGGGGCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMVLLQV*GGGLAA
Trigger: TGCTGCTAAGCCCCCACCCCACACTTGAAGCAGCAC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTAAGAGGCTCTGGGGCTaGTTCAGCACCCGTGACAGG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLKRLWG*FSTRDR
Trigger: CCTGTCACGGGTGCTGAACCAGCCCCAGAGCCTCTT...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTCCACTAAGAGGCTCTaGGGCTGGTTCAGCACCCGT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMSTKRL*GWFSTR
Trigger: ACGGGTGCTGAACCAGCCCCAGAGCCTCTTAGTGGA...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGTCCACTAAGAGGCTCTaGGGCTGGTTCAGCACCCGT +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALSTKRL*GWFSTR
Trigger: ACGGGTGCTGAACCAGCCCCAGAGCCTCTTAGTGGA...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGAACTGGGGGTGAGATaGTCAGGCACTCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALELGVR*SGTQVG
Trigger: CCCTACCTGAGTGCCTGACCATCTCACCCCCAGTTC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGCTGAGGTATGGTCAGTaGGCTGAGGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQLRYGQ*AEACRL
Trigger: CAGTCTACAAGCCTCAGCCCACTGACCATACCTCAG...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTACCTCCTGGCCCCACTaGTACCCAGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLTSWPH*YPGNMP
Trigger: GGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGT...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGGAACTGGGGAGTGGTaGGCTGCACTTTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALGTGEW*AALCPT
Trigger: TGTGGGACAAAGTGCAGCCCACCACTCCCCAGTTCC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACCATGCATACTGGAACTaGGGAGTGGTGGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDHAYWN*GVVGCT
Trigger: AGTGCAGCCCACCACTCCCCAGTTCCAGTATGCATG...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGGCTCAGTGCCAGGCTaGAGGTTAAGACCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMGSVPG*RLRPQS
Trigger: AGACTGGGGTCTTAACCTCCAGCCTGGCACTGAGCC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTCTGCTAGGTTGCAGGTaGCTCAGTGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLLLGCR*LSARLE
Trigger: CTCCAGCCTGGCACTGAGCCACCTGCAACCTAGCAG...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTCAGCTGAGTCAGGCTaGGAGCCAAGGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMSAESG*EPRSPA
Trigger: AGCAGGTGACCTTGGCTCCCAGCCTGACTCAGCTGA...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACCAGTTGGACCAGGATTaGAGGTCATCTCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDQLDQD*RSSLVG
Trigger: GCCAACCAGAGATGACCTTCAATCCTGGTCCAACTG...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCCAGTTGGACCAGGATTaGAGGTCATCTCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGQLDQD*RSSLVG
Trigger: GCCAACCAGAGATGACCTTCAATCCTGGTCCAACTG...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACCGCCCCCTCACATTTTaGTATTGTGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDRPLTF*YCVSSR
Trigger: CCTGCTGGAGACACAATATCAAAATGTGAGGGGGCG...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACCTAGTCCACCAATGTTaGTGCTGGCCTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDLVHQC*CWPLGC
Trigger: ACATCCCAGAGGCCAGCATCAACATTGGTGGACTAG...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCTCAGAGTCAGCTCTTaGCTGCATCAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALLRVSS*LHQPPL
Trigger: CAGAGGTGGCTGATGCAGGCAAGAGCTGACTCTGAG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417393.1
CDS-3UTR GCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGTCAGCTCTTGCCTATaGACAGGATCCAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDVSSCL*TGSRFS
Trigger: GCTGAACCTGGATCCTGTGCATAGGCAAGAGCTGAC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGTCAGCTCAGCTGGGCTaGTACTCAGGATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALSAQLG*YSGSAP
Trigger: TGGAGCTGATCCTGAGTACCAGCCCAGCTGAGCTGA...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTCAGCTCAGCTGGGCTaGTACTCAGGATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMSAQLG*YSGSAP
Trigger: TGGAGCTGATCCTGAGTACCAGCCCAGCTGAGCTGA...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTCTCTGGTTGGCATGTaGAATCCAGGGGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGSLVGM*NPGAAL
Trigger: CAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGA...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAAGGTCATCTCTGGTTaGCATGTGGAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDKVISG*HVESRG
Trigger: GCCCCTGGATTCCACATGCCAACCAGAGATGACCTT...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCAAGGTCATCTCTGGTTaGCATGTGGAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGKVISG*HVESRG
Trigger: GCCCCTGGATTCCACATGCCAACCAGAGATGACCTT...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGATTGAAGGTCATCTCTaGTTGGCATGTGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLIEGHL*LACGIQ
Trigger: CTGGATTCCACATGCCAACCAGAGATGACCTTCAAT...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGGGGTCTCCTCTGGCTaGTGTTCAGGATCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLGVSSG*CSGSRV
Trigger: TACCCTGGATCCTGAACACCAGCCAGAGGAGACCCC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTAGCTGGGGTCTCCTCTaGCTGGTGTTCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLSWGLL*LVFRIQ
Trigger: CTGGATCCTGAACACCAGCCAGAGGAGACCCCAGCT...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATAGCTGGGGTCTCCTCTaGCTGGTGTTCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDSWGLL*LVFRIQ
Trigger: CTGGATCCTGAACACCAGCCAGAGGAGACCCCAGCT...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGTGCTGCTTCAAGTGTaGGGTGGGGGCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLVLLQV*GGGLAA
Trigger: TGCTGCTAAGCCCCCACCCCACACTTGAAGCAGCAC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCAAGTGCACCTGGTCATaGGTGGTGAGATGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGKCTWS*VVRCSL
Trigger: CAAGCTGCATCTCACCACCCATGACCAGGTGCACTT...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAAGTGCACCTGGTCATaGGTGGTGAGATGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDKCTWS*VVRCSL
Trigger: CAAGCTGCATCTCACCACCCATGACCAGGTGCACTT...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGAACTGGGGGTGAGATaGTCAGGCACTCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDELGVR*SGTQVG
Trigger: CCCTACCTGAGTGCCTGACCATCTCACCCCCAGTTC...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGAACTGGGGGTGAGATaGTCAGGCACTCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLELGVR*SGTQVG
Trigger: CCCTACCTGAGTGCCTGACCATCTCACCCCCAGTTC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGTTCCTTGCCCTGGATaGCCTCAGATGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQVPCPG*PQMSFS
Trigger: GGAAAAAGACATCTGAGGCCATCCAGGGCAAGGAAC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCGCCCCCTCACATTTTaGTATTGTGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMRPLTF*YCVSSR
Trigger: CCTGCTGGAGACACAATATCAAAATGTGAGGGGGCG...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCGCCCCCTCACATTTTaGTATTGTGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALRPLTF*YCVSSR
Trigger: CCTGCTGGAGACACAATATCAAAATGTGAGGGGGCG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTCTCTGGTTGGCATGTaGAATCCAGGGGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMSLVGM*NPGAAL
Trigger: CAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGA...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGAAGGTCATCTCTGGTTaGCATGTGGAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALKVISG*HVESRG
Trigger: GCCCCTGGATTCCACATGCCAACCAGAGATGACCTT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTTCAGCTCTTGCATGTTaGTGCTGGCCTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLSALAC*CWPLGC
Trigger: ACATCCCAGAGGCCAGCATCAACATGCAAGAGCTGA...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354862.4
CDS-3UTR TCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATCAGTTGGACCAGGATTaGAGGTCATCTCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDQLDQD*RSSLVG
Trigger: GCCAACCAGAGATGACCTTCAATCCTGGTCCAACTG...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR TCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGTCGGGGCAGTCTATTaGACCAGAAAGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMVGAVY*TRKTVP
Trigger: AGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGAC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCTCAGAGTCAGCTCTTaGATGTTGATGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMLRVSS*MLMLAS
Trigger: AGAGGCCAGCATCAACATGCAAGAGCTGACTCTGAG...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354862.4
CDS-3UTR GCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGAGAAAGACAGTTCCTTaGCCTGGATGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALRKTVP*PGWPQM
Trigger: CATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGAGAAAGACAGTTCCTTaGCCTGGATGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMRKTVP*PGWPQM
Trigger: CATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCT...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATCCGACCCAATCTACTTaGTGGCCTTCTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDPTQST*WPSVFQ
Trigger: CTGGAAGACAGAAGGCCAGCAAGTAGATTGGGTCGG...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR GCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATCTCAGAGTCAGCTCTTaGCTATGCACAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDLRVSS*LCTGSR
Trigger: CCTGGATCCTGTGCATAGGCAAGAGCTGACTCTGAG...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTCTCAGAGTCAGCTCTTaGCTATGCACAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLLRVSS*LCTGSR
Trigger: CCTGGATCCTGTGCATAGGCAAGAGCTGACTCTGAG...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATTCTCTGGTTGGCATGTaGAATCCAGGGGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDSLVGM*NPGAAL
Trigger: CAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGA...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCCAGGGTAAGCTCAGTTaGACCAGGATTGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLSGQSIEPERQFLALDGQGKLS*TRIEGH
Trigger: ATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTG...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATAAGTGCACCTGGTCATaGGTGGTGAGATGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDKCTWS*VVRCSL
Trigger: CAAGCTGCATCTCACCACCCATGACCAGGTGCACTT...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGTTCCTTGCCCTGGATaGCCTCAGATGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMVPCPG*PQMSFS
Trigger: GGAAAAAGACATCTGAGGCCATCCAGGGCAAGGAAC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTCTGAGGTATGGTCAGTaGGCTGAGGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLLRYGQ*AEACRL
Trigger: CAGTCTACAAGCCTCAGCCCACTGACCATACCTCAG...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATCTGAGGTATGGTCAGTaGGCTGAGGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDLRYGQ*AEACRL
Trigger: CAGTCTACAAGCCTCAGCCCACTGACCATACCTCAG...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGATAGCACAGGTGACCTaGAAGAGACCCATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMIAQVT*KRPIPY
Trigger: ATAGGGGATGGGTCTCTTCCAGGTCACCTGTGCTAT...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR TCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTCGGGGCAGTCTATTaGACCAGAAAGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDVGAVY*TRKTVP
Trigger: AGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGAC...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR GCA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTAGAAAGACAGTTCCTTaGCCTGGATGGCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: AEACRLSGQSIEPERQFLRKTVP*PGWPQM
Trigger: CATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCT...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGCAGGGTAAGCTCAGTTaGACCAGGATTGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALQGKLS*TRIEGH
Trigger: ATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTG...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGTTTCCATCCAGAATATaGGGCGCCCCCTCACATTTT +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALFPSRI*GAPSHF
Trigger: AAAATGTGAGGGGGCGCCCCATATTCTGGATGGAAA...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTTCCTTGCCCTGGATaGCCTCAGATGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDVPCPG*PQMSFS
Trigger: GGAAAAAGACATCTGAGGCCATCCAGGGCAAGGAAC...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGATTGAAGGTCATCTCTaGTTGGCATGTGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: ACRLSGQSIEPERQFLALIEGHL*LACGIQ
Trigger: CTGGATTCCACATGCCAACCAGAGATGACCTTCAAT...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGATTGAAGGTCATCTCTaGTTGGCATGTGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMIEGHL*LACGIQ
Trigger: CTGGATTCCACATGCCAACCAGAGATGACCTTCAAT...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CCA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATTTTCCATCCAGAATATaGGGCGCCCCCTCACATTTT +
Preference number: 4 (lower is better)
Translates to: CRLSGQSIEPERQFLALDFPSRI*GAPSHF
Trigger: AAAATGTGAGGGGGCGCCCCATATTCTGGATGGAAA...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS TCA 90 bp GCTTGCGGAAGCCCCGGGCCCGAGCAAAGACCTCCAGGCCCTCCATaGGGCGGCGGCCAAAGCCACGGCCCCTCAGGGCCCGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: ACGSPGPEQRPPGPP*GGGQSHGPSGPGPP
Trigger: TGGTGGCCCGGGCCCTGAGGGGCCGTGGCTTTGGCCGCCGCCTCATGGAGGGCCTGGAGGTCTTTGCTCGGGCCCGGGGCTTCCGCAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CCA 90 bp AGGGCCCGGGCCACCACCACTGTCTCCACTAAGAGGCTCTGGGGCTaGTTCAGCACCCGTGACAGGCGGGCATGGCCCACCACAACGGGT +
Preference number: 5 (lower is better)
Translates to: RARATTTVSTKRLWG*FSTRDRRAWPTTTG
Trigger: ACCCGTTGTGGTGGGCCATGCCCGCCTGTCACGGGTGCTGAACCAGCCCCAGAGCCTCTTAGTGGAGACAGTGGTGGTGGCCCGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS TCA 90 bp GCTGGTAGCCCAGGTGGGTATAGAAGTGCACCTGGTCATGGGTGGTaGGATGCAGCTTGCGGAAGCCCCGGGCCCGAGCAAAGACCTCCA +
Preference number: 5 (lower is better)
Translates to: AGSPGGYRSAPGHGW*DAACGSPGPEQRPP
Trigger: TGGAGGTCTTTGCTCGGGCCCGGGGCTTCCGCAAGCTGCATCTCACCACCCATGACCAGGTGCACTTCTATACCCACCTGGGCTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CCA 90 bp TCGGCGGTGCACAGGCTCCAGGGTCAACTCAGCCAGGCTAGGAGCTaGGGTCTCCTCTGGCTGGTGTTCAGGATCCAGGGTAAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: SAVHRLQGQLSQARS*GLLWLVFRIQGKLS
Trigger: ACTGAGCTTACCCTGGATCCTGAACACCAGCCAGAGGAGACCCCAGCTCCTAGCCTGGCTGAGTTGACCCTGGAGCCTGTGCACCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CCA 90 bp CTGAGTCAGGCTGGGAGCCAAGGTCACCTGCTGCTAGGTTGCAGGTaGCTCAGTGCCAGGCTGGAGGTTAAGACCCCAGTCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LSQAGSQGHLLLGCR*LSARLEVKTPVSRQ
Trigger: CTGCCTGGAGACTGGGGTCTTAACCTCCAGCCTGGCACTGAGCCACCTGCAACCTAGCAGCAGGTGACCTTGGCTCCCAGCCTGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
ENST00000452674.1
CDS TCA 90 bp TCCCCCTCCCTCCTAGTGGGTCACAGGCTGTGGAGCTTTTGGGAATaGGGACTTCGAGAGCTCGACTCTGTGGGCAGGTGTGGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SPSLLVGHRLWSFWE*GLRELDSVGRCGSA
Trigger: TGCCGAGCCACACCTGCCCACAGAGTCGAGCTCTCGAAGTCCTCATTCCCAAAAGCTCCACAGCCTGTGACCCACTAGGAGGGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450489.1
CDS-3UTR CAA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGAATCCAGGGGCAGCTTaGGCTGGCACGCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKNPGAA*AGTQDP
Trigger: TGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATT...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CAA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGGCAATGGAGGTCCCTaGGGACCCCTTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQGNGGP*GPLGAA
Trigger: AGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGCC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGTCACCTGCTGCTAGGTaGCAGGTGGCTCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLSPAAR*QVAQCQ
Trigger: CTGGCACTGAGCCACCTGCAACCTAGCAGCAGGTGA...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443094.3
CDS CCA 90 bp AAGGTCATCTCTGGTTGGCATGTGGAATCCAGGGGCAGCTTTGGCTaGCACGCAGGATCCAGAGTCAGCTCAGCTGGGCTGGTACTCAGG +
Preference number: 5 (lower is better)
Translates to: KVISGWHVESRGSFG*HAGSRVSSAGLVLR
Trigger: CCTGAGTACCAGCCCAGCTGAGCTGACTCTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS-3UTR CAA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGTCCCTTGGGACCCCTaGGGGCAGCTTGGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDVPWDP*GQLGQS
Trigger: TGACTGCCCAAGCTGCCCCAAGGGGTCCCAAGGGAC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTCAGAGTCAGCTCTaGCCTGCATCAGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKAQSQL*PASATS
Trigger: AGAGGTGGCTGATGCAGGCAAGAGCTGACTCTGAGC...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417393.1
CDS-3UTR CAA 90 bp AGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCTGGTCAGCTCTTGCATGTaGATGCTGGCCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: RATSWPHWYPGNMPRLKLVSSCM*MLASGM
Trigger: CATCCCAGAGGCCAGCATCAACATGCAAGAGCTGAC...CAGCTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354862.4
CDS-3UTR CAA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGAAGGTCATCTCTGGTaGGCATGTGGAATCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKEGHLW*ACGIQG
Trigger: CCCCTGGATTCCACATGCCAACCAGAGATGACCTTC...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CAA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGTCCCTTGGGACCCCTaGGGGCAGCTTGGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: ACRLSGQSIEPERQFLALVPWDP*GQLGQS
Trigger: TGACTGCCCAAGCTGCCCCAAGGGGTCCCAAGGGAC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGTCCCTTGGGACCCCTaGGGGCAGCTTGGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMVPWDP*GQLGQS
Trigger: TGACTGCCCAAGCTGCCCCAAGGGGTCCCAAGGGAC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGGCAATGGAGGTCCCTaGGGACCCCTTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: ACRLSGQSIEPERQFLALGNGGP*GPLGAA
Trigger: AGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGCC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAATCTCCAGCAGGCTTTTaGAAGGGGGCCCTGATGGAA +
Preference number: 5 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKSPAGF*KGALME
Trigger: TTCCATCAGGGCCCCCTTCAAAAAGCCTGCTGGAGA...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CAA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGGCGCCCCCTCACATTTaGATATTGTGTCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKAPPHI*ILCLQQ
Trigger: CTGCTGGAGACACAATATCAAAATGTGAGGGGGCGC...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CAA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGCAGAAAGACAGTTCCTaGCCCTGGATGGCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKQKDSS*PWMASD
Trigger: ATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCTG...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS TCA 90 bp CAGATAGATCCAGGTGTCTACCCCACATTGGAGGGAGGCTGGGAGTaGTGGATGAGCTGCTTAAGGCTGGGGCAGAACCTAGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: QIDPGVYPTLEGGWE*WMSCLRLGQNLGVL
Trigger: CAGGACTCCTAGGTTCTGCCCCAGCCTTAAGCAGCTCATCCATCACTCCCAGCCTCCCTCCAATGTGGGGTAGACACCTGGATCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442620.5
ENST00000443842.1
ENST00000452674.1
CDS CCA 90 bp ATTGAAGGTCATCTCTGGTTGGCATGTGGAATCCAGGGGCAGCTTTaGCTGGCACGCAGGATCCAGAGTCAGCTCAGCTGGGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: IEGHLWLACGIQGQL*LARRIQSQLSWAGT
Trigger: AGTACCAGCCCAGCTGAGCTGACTCTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CCA 90 bp TCCAGGGTAAGCTCAGTTGGACCAGGATTGAAGGTCATCTCTGGTTaGCATGTGGAATCCAGGGGCAGCTTTGGCTGGCACGCAGGATCC +
Preference number: 5 (lower is better)
Translates to: SRVSSVGPGLKVISG*HVESRGSFGWHAGS
Trigger: GGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CCA 90 bp AGGATCCAGGGTAAGCTCAGTTGGACCAGGATTGAAGGTCATCTCTaGTTGGCATGTGGAATCCAGGGGCAGCTTTGGCTGGCACGCAGG +
Preference number: 5 (lower is better)
Translates to: RIQGKLSWTRIEGHL*LACGIQGQLWLARR
Trigger: CCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS-3UTR CAA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCAATCCAGGGGCAGCTTaGGCTGGCACGCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: RLSGQSIEPERQFLALDGNPGAA*AGTQDP
Trigger: TGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATT...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAATCCAGGGGCAGCTTaGGCTGGCACGCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDNPGAA*AGTQDP
Trigger: TGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATT...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCAATGGAGGTCCCTaGGGACCCCTTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CRLSGQSIEPERQFLALDGNGGP*GPLGAA
Trigger: AGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGCC...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGGCAATGGAGGTCCCTaGGGACCCCTTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: AEACRLSGQSIEPERQFLGNGGP*GPLGAA
Trigger: AGCTGCCCCAAGGGGTCCCAAGGGACCTCCATTGCC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAAGTGTCGGGGCAGTCTATaGAACCAGAAAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: ARATSWPHWYPGNMPRLKCRGSL*NQKDSS
Trigger: GGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACA...CTTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CAA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGGAAGGTCATCTCTGGTaGGCATGTGGAATCCAGGGG +
Preference number: 5 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQEGHLW*ACGIQG
Trigger: CCCCTGGATTCCACATGCCAACCAGAGATGACCTTC...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp AGCCAGAGCCACCTCCTGGCCCCACTGGTACCCAGGAAACATGCCCAGGTTAAATGTCGGGGCAGTCTATaGAACCAGAAAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: SQSHLLAPLVPRKHAQVKCRGSL*NQKDSS
Trigger: GGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACA...TTTAACCTGGGCATGTTTCCTGGGTACCAGTGGGGCCAGGAGGTGGCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
CDS-3UTR CAA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGCCTAGTCCACCAATGTaGATGCTGGCCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQPSPPM*MLASGM
Trigger: CATCCCAGAGGCCAGCATCAACATTGGTGGACTAGG...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS CCA 90 bp TGGGGTCTCCTCTGGCTGGTGTTCAGGATCCAGGGTAAGCTCAGTTaGACCAGGATTGAAGGTCATCTCTGGTTGGCATGTGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: WGLLWLVFRIQGKLS*TRIEGHLWLACGIQ
Trigger: CTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGATCCTGAACACCAGCCAGAGGAGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS-3UTR CAA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATAATCCAGGGGCAGCTTaGGCTGGCACGCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: CRLSGQSIEPERQFLALDNPGAA*AGTQDP
Trigger: TGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATT...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCGAAGGTCATCTCTGGTaGGCATGTGGAATCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RLSGQSIEPERQFLALDGEGHLW*ACGIQG
Trigger: CCCCTGGATTCCACATGCCAACCAGAGATGACCTTC...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGAAGGTCATCTCTGGTaGGCATGTGGAATCCAGGGG +
Preference number: 5 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDEGHLW*ACGIQG
Trigger: CCCCTGGATTCCACATGCCAACCAGAGATGACCTTC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp AGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTCTCCAGCAGGCTTTTaGAAGGGGGCCCTGATGGAA +
Preference number: 5 (lower is better)
Translates to: RLSGQSIEPERQFLALDGSPAGF*KGALME
Trigger: TTCCATCAGGGCCCCCTTCAAAAAGCCTGCTGGAGA...GCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGCAGAAAGACAGTTCCTaGCCCTGGATGGCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQQKDSS*PWMASD
Trigger: ATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCTG...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTTCACCTGCTGCTAGGTaGCAGGTGGCTCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: AEACRLSGQSIEPERQFLSPAAR*QVAQCQ
Trigger: CTGGCACTGAGCCACCTGCAACCTAGCAGCAGGTGA...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGTGGCTCTCCTCATGTaGATGCTGGCCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMVALLM*MLASGM
Trigger: CATCCCAGAGGCCAGCATCAACATGAGGAGAGCCAC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443094.3
CDS-3UTR CAA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGTCAGTTGGACCAGGATaGAAGGTCATCTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQSVGPG*KVISGW
Trigger: CCAACCAGAGATGACCTTCAATCCTGGTCCAACTGA...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTCTCCAGCAGGCTTTTaGAAGGGGGCCCTGATGGAA +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMSPAGF*KGALME
Trigger: TTCCATCAGGGCCCCCTTCAAAAAGCCTGCTGGAGA...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACGCGCCCCCTCACATTTaGATATTGTGTCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDAPPHI*ILCLQQ
Trigger: CTGCTGGAGACACAATATCAAAATGTGAGGGGGCGC...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACCAGAAAGACAGTTCCTaGCCCTGGATGGCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: VSGLRLVDCRGSLLNQKDQKDSS*PWMASD
Trigger: ATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCTG...GTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCCGACCCAATCTACTaGCTGGCCTTCTGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMADPIY*LAFCLP
Trigger: TGGAAGACAGAAGGCCAGCAAGTAGATTGGGTCGGC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTCTGGCTACAAATTaGTCCTCCTCAGGACCTCCC +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMALATN*SSSGPP
Trigger: GGGAGGTCCTGAGGAGGACAAATTTGTAGCCAGAGC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCTCAGAGTCAGCTCTaGCCTATGCACAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMAQSQL*PMHRIQ
Trigger: CTGGATCCTGTGCATAGGCAAGAGCTGACTCTGAGC...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGCGCCCCCTCACATTTaGATATTGTGTCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: ACRLSGQSIEPERQFLALAPPHI*ILCLQQ
Trigger: CTGCTGGAGACACAATATCAAAATGTGAGGGGGCGC...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGTGGTGGGCTGCACTTaGTCCCACACTCACCTGATA +
Preference number: 5 (lower is better)
Translates to: AEACRLSGQSIEPERQFLVVGCT*SHTHLI
Trigger: TATCAGGTGAGTGTGGGACAAAGTGCAGCCCACCAC...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS-3UTR CAA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCTCAGAGTCAGCTCTaGCCTATGCACAGGATCCAG +
Preference number: 5 (lower is better)
Translates to: CRLSGQSIEPERQFLALDAQSQL*PMHRIQ
Trigger: CTGGATCCTGTGCATAGGCAAGAGCTGACTCTGAGC...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTCAGTTGGACCAGGATaGAAGGTCATCTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMSVGPG*KVISGW
Trigger: CCAACCAGAGATGACCTTCAATCCTGGTCCAACTGA...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGTCAGTTGGACCAGGATaGAAGGTCATCTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: ACRLSGQSIEPERQFLALSVGPG*KVISGW
Trigger: CCAACCAGAGATGACCTTCAATCCTGGTCCAACTGA...CAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGCGCCCCCTCACATTTaGATATTGTGTCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CRLSGQSIEPERQFLALDAPPHI*ILCLQQ
Trigger: CTGCTGGAGACACAATATCAAAATGTGAGGGGGCGC...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATGTGTCGGGGCAGTCTATaGAACCAGAAAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: VDCRGSLLNQKDSSLPWMCRGSL*NQKDSS
Trigger: GGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACA...CATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATTCAGTTGGACCAGGATaGAAGGTCATCTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: CRLSGQSIEPERQFLALDSVGPG*KVISGW
Trigger: CCAACCAGAGATGACCTTCAATCCTGGTCCAACTGA...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGCCTCACATTTTGATATaGTGTCTCCAGCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GMVSGLRLVDCRGSLLNQPHILI*CLQQAF
Trigger: AAAAGCCTGCTGGAGACACAATATCAAAATGTGAGG...CTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTTGTCGGGGCAGTCTATaGAACCAGAAAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: AEACRLSGQSIEPERQFLCRGSL*NQKDSS
Trigger: GGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACA...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp TGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTGGATCCTCACATTTTGATATaGTGTCTCCAGCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: CRLSGQSIEPERQFLALDPHILI*CLQQAF
Trigger: AAAAGCCTGCTGGAGACACAATATCAAAATGTGAGG...ATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS-3UTR CAA 90 bp GCTGAGGCTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTTCCTCACATTTTGATATaGTGTCTCCAGCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: AEACRLSGQSIEPERQFLPHILI*CLQQAF
Trigger: AAAAGCCTGCTGGAGACACAATATCAAAATGTGAGG...AAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS GCA 72 bp CGACAACGTTGGCCCCCAGCGGTGCGGCGGATGTTCTaGAGCCGTCGCGTCCTGCGGCACGCCACGGCGTTC +
Preference number: 6 (lower is better)
Translates to: RQRWPPAVRRMF*SRRVLRHATAF
Trigger: GAACGCCGTGGCGTGCCGCAGGACGCGACGGCTGCAGAACATCCGCCGCACCGCTGGGGGCCAACGTTGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS GCA 72 bp CGGACTCCTCGGTCCGACAACGTTGGCCCCCAGCGGTaGGGCGGATGTTCTGCAGCCGTCGCGTCCTGCGGC +
Preference number: 6 (lower is better)
Translates to: RTPRSDNVGPQR*GGCSAAVASCG
Trigger: GCCGCAGGACGCGACGGCTGCAGAACATCCGCCGCACCGCTGGGGGCCAACGTTGTCGGACCGAGGAGTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS GCA 72 bp CAGCGGTGCGGCGGATGTTCTGCAGCCGTCGCGTCCTaGGGCACGCCACGGCGTTCTAAGGCCTCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: QRCGGCSAAVAS*GTPRRSKASQH
Trigger: GTGCTGGGAGGCCTTAGAACGCCGTGGCGTGCCGCAGGACGCGACGGCTGCAGAACATCCGCCGCACCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS CCA 72 bp AGCAGCATCAGGCAGAGGGGGAAGGCATCTGAGGACTaGCCCAGGGAGTGCAGGCGGGAGGTGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SSIRQRGKASED*PRECRREVRLR
Trigger: CCGCAGCCGCACCTCCCGCCTGCACTCCCTGGGCCAGTCCTCAGATGCCTTCCCCCTCTGCCTGATGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CCA 72 bp CTCTGGGGCTGGTTCAGCACCCGTGACAGGCGGGCATaGCCCACCACAACGGGTGCTGCTTCAAGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: LWGWFSTRDRRA*PTTTGAASSVG
Trigger: CCCCACACTTGAAGCAGCACCCGTTGTGGTGGGCCATGCCCGCCTGTCACGGGTGCTGAACCAGCCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CCA 72 bp GCCACCACCACTGTCTCCACTAAGAGGCTCTGGGGCTaGTTCAGCACCCGTGACAGGCGGGCATGGCCCACC +
Preference number: 6 (lower is better)
Translates to: ATTTVSTKRLWG*FSTRDRRAWPT
Trigger: GGTGGGCCATGCCCGCCTGTCACGGGTGCTGAACCAGCCCCAGAGCCTCTTAGTGGAGACAGTGGTGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS TCA 72 bp AGGGAGTGCAGGCGGGAGGTGCGGCTGCGGGGCCACTaGTCATTGATGAGGTCAGCACAAGCATCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RECRREVRLRGH*SLMRSAQASRS
Trigger: GCTCCTGGATGCTTGTGCTGACCTCATCAATGATCAGTGGCCCCGCAGCCGCACCTCCCGCCTGCACTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS GCA 72 bp AGGTCAGCACAAGCATCCAGGAGCTCGGGTCGGCGGTaGACAGGCTCCAGGGTCAACTCAGCCAGGCTAGGA +
Preference number: 6 (lower is better)
Translates to: RSAQASRSSGRR*TGSRVNSARLG
Trigger: TCCTAGCCTGGCTGAGTTGACCCTGGAGCCTGTGCACCGCCGACCCGAGCTCCTGGATGCTTGTGCTGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CCA 72 bp GCCTCTGGGATGTTCCGCGTCCTAGCTCCGCACAGCTaGGTATCTCACTCAGTCGCCACCTCGGACTCCTCG +
Preference number: 6 (lower is better)
Translates to: ASGMFRVLAPHS*VSHSVATSDSS
Trigger: CGAGGAGTCCGAGGTGGCGACTGAGTGAGATACCCAGCTGTGCGGAGCTAGGACGCGGAACATCCCAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354862.4
ENST00000443094.3
ENST00000443842.1
CDS TCA 72 bp CCAGGTGGGTATAGAAGTGCACCTGGTCATGGGTGGTaGGATGCAGCTTGCGGAAGCCCCGGGCCCGAGCAA +
Preference number: 6 (lower is better)
Translates to: PGGYRSAPGHGW*DAACGSPGPEQ
Trigger: TTGCTCGGGCCCGGGGCTTCCGCAAGCTGCATCTCACCACCCATGACCAGGTGCACTTCTATACCCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CCA 72 bp GCTGGGAGCCAAGGTCACCTGCTGCTAGGTTGCAGGTaGCTCAGTGCCAGGCTGGAGGTTAAGACCCCAGTC +
Preference number: 6 (lower is better)
Translates to: AGSQGHLLLGCR*LSARLEVKTPV
Trigger: GACTGGGGTCTTAACCTCCAGCCTGGCACTGAGCCACCTGCAACCTAGCAGCAGGTGACCTTGGCTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
ENST00000452674.1
CDS CCA 72 bp TCTGGTTGGCATGTGGAATCCAGGGGCAGCTTTGGCTaGCACGCAGGATCCAGAGTCAGCTCAGCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: SGWHVESRGSFG*HAGSRVSSAGL
Trigger: CAGCCCAGCTGAGCTGACTCTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CAA 90 bp AGGATCAGCTCCATCCGGTGTGTAGGGTCTAGTGTAGGGGTCAGCTaGGCTGGGCCAGGGCTCAGAGTCAGCTCTTGCCTGCATCAGCCA +
Preference number: 6 (lower is better)
Translates to: RISSIRCVGSSVGVS*AGPGLRVSSCLHQP
Trigger: TGGCTGATGCAGGCAAGAGCTGACTCTGAGCCCTGGCCCAGCCAAGCTGACCCCTACACTAGACCCTACACACCGGATGGAGCTGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417393.1
CDS CAA 90 bp CTCGGTTTCCCCCTCCCTCCTAGTGGGTCACAGGCTGTGGAGCTTTaGGGAATGAGGACTTCGAGAGCTCGACTCTGTGGGCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: LGFPLPPSGSQAVEL*GMRTSRARLCGQVW
Trigger: CCACACCTGCCCACAGAGTCGAGCTCTCGAAGTCCTCATTCCCAAAAGCTCCACAGCCTGTGACCCACTAGGAGGGAGGGGGAAACCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450489.1
CDS CCA 72 bp GCTCAGAGTCAGCTCTTGCATGTTGATGCTGGCCTCTaGGATGTTCCGCGTCCTAGCTCCGCACAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: AQSQLLHVDAGL*DVPRPSSAQLG
Trigger: ACCCAGCTGTGCGGAGCTAGGACGCGGAACATCCCAGAGGCCAGCATCAACATGCAAGAGCTGACTCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354862.4
CDS CCA 72 bp CTTTGGCTGGCACGCAGGATCCAGAGTCAGCTCAGCTaGGCTGGTACTCAGGATCAGCTCCATCCGGTGTGT +
Preference number: 6 (lower is better)
Translates to: LWLARRIQSQLS*AGTQDQLHPVC
Trigger: ACACACCGGATGGAGCTGATCCTGAGTACCAGCCCAGCTGAGCTGACTCTGGATCCTGCGTGCCAGCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CCA 72 bp CATCTCTGGTTGGCATGTGGAATCCAGGGGCAGCTTTaGCTGGCACGCAGGATCCAGAGTCAGCTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: HLWLACGIQGQL*LARRIQSQLSW
Trigger: CCAGCTGAGCTGACTCTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CAA 72 bp GGTCAGCTTGGCTGGGCCAGGGCTCAGAGTCAGCTCTaGCCTATGCACAGGATCCAGGTTCAGCTGAGTCAG +
Preference number: 6 (lower is better)
Translates to: GQLGWARAQSQL*PMHRIQVQLSQ
Trigger: CTGACTCAGCTGAACCTGGATCCTGTGCATAGGCAAGAGCTGACTCTGAGCCCTGGCCCAGCCAAGCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
ENST00000452674.1
CDS CAA 72 bp CCCCTCCCTCCTAGTGGGTCACAGGCTGTGGAGCTTTaGGGAATGAGGACTTCGAGAGCTCGACTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: PLPPSGSQAVEL*GMRTSRARLCG
Trigger: CCCACAGAGTCGAGCTCTCGAAGTCCTCATTCCCAAAAGCTCCACAGCCTGTGACCCACTAGGAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450489.1
CDS CAA 90 bp AGGATCAGCTCCATCCGGTGTGTAGGGTCTAGTGTAGGGGTCAGCTaGGCTGGGCCAGGGCTCAGAGTCAGCTCTTGCCTATGCACAGGA +
Preference number: 6 (lower is better)
Translates to: RISSIRCVGSSVGVS*AGPGLRVSSCLCTG
Trigger: TCCTGTGCATAGGCAAGAGCTGACTCTGAGCCCTGGCCCAGCCAAGCTGACCCCTACACTAGACCCTACACACCGGATGGAGCTGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
ENST00000452674.1
CDS TCA 72 bp CCAGGTGTCTACCCCACATTGGAGGGAGGCTGGGAGTaGTGGATGAGCTGCTTAAGGCTGGGGCAGAACCTA +
Preference number: 6 (lower is better)
Translates to: PGVYPTLEGGWE*WMSCLRLGQNL
Trigger: TAGGTTCTGCCCCAGCCTTAAGCAGCTCATCCATCACTCCCAGCCTCCCTCCAATGTGGGGTAGACACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442620.5
ENST00000443842.1
ENST00000452674.1
CDS CAA 72 bp TCATCTCTGGTTGGCATGTGGAATCCAGGGGCAGCTTaGGCTGGCACGCAGGATCCAGAGTCAGCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: SSLVGMWNPGAA*AGTQDPESAQL
Trigger: CAGCTGAGCTGACTCTGGATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS TCA 72 bp CTCCTAGTGGGTCACAGGCTGTGGAGCTTTTGGGAATaGGGACTTCGAGAGCTCGACTCTGTGGGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LLVGHRLWSFWE*GLRELDSVGRC
Trigger: ACACCTGCCCACAGAGTCGAGCTCTCGAAGTCCTCATTCCCAAAAGCTCCACAGCCTGTGACCCACTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450489.1
CDS CCA 72 bp GCTTTTGGGAATGAGGACTTCGAGAGCTCGACTCTGTaGGCAGGTGTGGCTCGGCATGGTCTGGAAACGAAC +
Preference number: 6 (lower is better)
Translates to: AFGNEDFESSTL*AGVARHGLETN
Trigger: GTTCGTTTCCAGACCATGCCGAGCCACACCTGCCCACAGAGTCGAGCTCTCGAAGTCCTCATTCCCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450489.1
CDS CAA 72 bp CATGCATACTGGAACTGGGGAGTGGTGGGCTGCACTTaGTCCCACACTCACCTGATAGCACAGGTGACCTGG +
Preference number: 6 (lower is better)
Translates to: HAYWNWGVVGCT*SHTHLIAQVTW
Trigger: CCAGGTCACCTGTGCTATCAGGTGAGTGTGGGACAAAGTGCAGCCCACCACTCCCCAGTTCCAGTATGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442620.5
ENST00000443842.1
CDS CAA 90 bp ATCCAGGGTAAGCTCAGTTGGACCAGGATTGAAGGTCATCTCTGGTaGGCATGTGGAATCCAGGGGCAGCTTTGGCTGGCACGCAGGATC +
Preference number: 6 (lower is better)
Translates to: IQGKLSWTRIEGHLW*ACGIQGQLWLARRI
Trigger: GATCCTGCGTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CCA 72 bp AGCTCAGTTGGACCAGGATTGAAGGTCATCTCTGGTTaGCATGTGGAATCCAGGGGCAGCTTTGGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSVGPGLKVISG*HVESRGSFGWH
Trigger: GTGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CAA 90 bp GGTATGGTCAGTGGGCTGAGGCTTGTAGACTGTCGGGGCAGTCTATaGAACCAGAAAGACAGTTCCTTGCCCTGGATGGCCTCAGATGTC +
Preference number: 6 (lower is better)
Translates to: GMVSGLRLVDCRGSL*NQKDSSLPWMASDV
Trigger: GACATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAGCCTCAGCCCACTGACCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CCA 72 bp GGTAAGCTCAGTTGGACCAGGATTGAAGGTCATCTCTaGTTGGCATGTGGAATCCAGGGGCAGCTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: GKLSWTRIEGHL*LACGIQGQLWL
Trigger: CAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CAA 72 bp AAGCTCAGTTGGACCAGGATTGAAGGTCATCTCTGGTaGGCATGTGGAATCCAGGGGCAGCTTTGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: KLSWTRIEGHLW*ACGIQGQLWLA
Trigger: TGCCAGCCAAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CAA 90 bp TCTGGCTGGTGTTCAGGATCCAGGGTAAGCTCAGTTGGACCAGGATaGAAGGTCATCTCTGGTTGGCATGTGGAATCCAGGGGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: SGWCSGSRVSSVGPG*KVISGWHVESRGSF
Trigger: AAAGCTGCCCCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGATCCTGAACACCAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CAA 90 bp GGGGTCTGTAACCACCAGGTCTATAAAACAGCCGACCCAATCTACTaGCTGGCCTTCTGTCTTCCAGTAGTCCTCCTAGTCCACCACTGC +
Preference number: 6 (lower is better)
Translates to: GVCNHQVYKTADPIY*LAFCLPVVLLVHHC
Trigger: GCAGTGGTGGACTAGGAGGACTACTGGAAGACAGAAGGCCAGCAAGTAGATTGGGTCGGCTGTTTTATAGACCTGGTGGTTACAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442620.5
ENST00000452674.1
CDS CCA 72 bp CTCTGGCTGGTGTTCAGGATCCAGGGTAAGCTCAGTTaGACCAGGATTGAAGGTCATCTCTGGTTGGCATGT +
Preference number: 6 (lower is better)
Translates to: LWLVFRIQGKLS*TRIEGHLWLAC
Trigger: ACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGATCCTGAACACCAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CCA 72 bp ACTTTGTCCCACACTCACCTGATAGCACAGGTGACCTaGAAGAGACCCATCCCCTATAGAGCAGGGCAGATA +
Preference number: 6 (lower is better)
Translates to: TLSHTHLIAQVT*KRPIPYRAGQI
Trigger: TATCTGCCCTGCTCTATAGGGGATGGGTCTCTTCCAGGTCACCTGTGCTATCAGGTGAGTGTGGGACAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442620.5
ENST00000443842.1
CDS CAA 90 bp GGGGTCTGTAACCACCAGGTCTATAAAACAGCCGACCCAATCTACTaGCTGGCCTTCTGTCTTCCAGTAGTCCTCCTAGTCCACCAATGT +
Preference number: 6 (lower is better)
Translates to: GVCNHQVYKTADPIY*LAFCLPVVLLVHQC
Trigger: ACATTGGTGGACTAGGAGGACTACTGGAAGACAGAAGGCCAGCAAGTAGATTGGGTCGGCTGTTTTATAGACCTGGTGGTTACAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443842.1
CDS CAA 72 bp TGTTCAGGATCCAGGGTAAGCTCAGTTGGACCAGGATaGAAGGTCATCTCTGGTTGGCATGTGGAATCCAGG +
Preference number: 6 (lower is better)
Translates to: CSGSRVSSVGPG*KVISGWHVESR
Trigger: CCTGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGATCCTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000442620.5
ENST00000443094.3
ENST00000443842.1
ENST00000450489.1
CDS CAA 72 bp TGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTaGCCCTGGATGGCCTCAGATGTCTTTTTCCATCCA +
Preference number: 6 (lower is better)
Translates to: CRGSLLNQKDSS*PWMASDVFFHP
Trigger: TGGATGGAAAAAGACATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CAA 72 bp AACCACCAGGTCTATAAAACAGCCGACCCAATCTACTaGCTGGCCTTCTGTCTTCCAGTAGTCCTCCTAGTC +
Preference number: 6 (lower is better)
Translates to: NHQVYKTADPIY*LAFCLPVVLLV
Trigger: GACTAGGAGGACTACTGGAAGACAGAAGGCCAGCAAGTAGATTGGGTCGGCTGTTTTATAGACCTGGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442620.5
ENST00000443842.1
ENST00000452674.1
CDS CAA 90 bp CTTGTAGACTGTCGGGGCAGTCTATTGAACCAGAAAGACAGTTCCTaGCCCTGGATGGCCTCAGATGTCTTTTTCCATCCAGAATATGGG +
Preference number: 6 (lower is better)
Translates to: LVDCRGSLLNQKDSS*PWMASDVFFHPEYG
Trigger: CCCATATTCTGGATGGAAAAAGACATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCGACAGTCTACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1
CDS CCA 72 bp GGCAGTCTATTGAACCAGAAAGACAGTTCCTTGCCCTaGATGGCCTCAGATGTCTTTTTCCATCCAGAATAT +
Preference number: 6 (lower is better)
Translates to: GSLLNQKDSSLP*MASDVFFHPEY
Trigger: ATATTCTGGATGGAAAAAGACATCTGAGGCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354862.4
ENST00000417393.1
ENST00000443094.3
ENST00000443842.1